Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0014479

Physical Location & Seq

Genomic Coordinates Reverse (-)

12690115 .. 12692055

Gene Structure 1941 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G131900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGACTGCGGTACCCTTTACGATATCAAAACCCCTCCCTCTCCTTGTTTGTTCTAGCTCCTTCAATTCCATTCTCTCACCGCCAAGAAGTTTTCTTTTTTCTTTTCGGTTTTTCTTTGTTATAATGGCTGAGGATCATATGAATCTATCAATAAACGGCCAGTCTCAAGTTCCTCCGGGCTTTCGGTTCCATCCAACTGAGGAGGAGCTTCTCCATTACTATCTGAGGAAGAAAGTGGCCTTTGAGAGGATTGATCTTGATGTGATTCGAGAAGTTGATCTCAATAAGCTCGAGCCATGGGATATTCAAGAGAAGTGCAAGATAGGTTCCACCCCACAAAACGATTGGTACTTTTTCAGTCACAAAGACAAGAAGTACCCGACCGGAACTCGAACCAATCGGGCAACGGCTGCCGGGTTTTGGAAGGCCACAGGGCGGGACAAGATCATCTACAGCGGCTTTAGAAGAATTGGGTTGAGAAAGACGCTTGTGTTTTACAAGGGGAGAGCTCCTCATGGGCAAAAGTCGGATTGGATCATGCATGAATATAGGCTTGATGAAAGCAACACCCATGACACCACCGTTTGTAATTCAATGGCCGAGTCAATGGCCGAAGATGGGTGGGTGGTATGCCGAGTATTCAAGAAGAAGAATTATCAGAAAGCCTTAGAGAGCCCTAAAGCCTCCTTCTCCATGGAATCATCAAGCAACCAAATACACAGTTCCAGAAACGATGGGGTGCTTGATCAGATACTCATGTACATGGGAAGGACTTGCAAGCTCGAAAACCATGACCAATCCTTGAATAACTTATCAGAAAGATTTATGCATCTCCCAAGGCTCGAGAGCCCAACTCTTCCAACTTTTGATCAGGACCGTAGCTTCAAAGCTTGCTACCAGGCCATTGATGAGATGCTCATAGACACTCCTTCTTCAACAAACCAACCAAGTAATGGTTGTGACAATAATGACCCAGTTGAAGATCATGATGAGTACCCCAAAACCAGGCTAAATGACTGGGCTACCCTTGACCGCCTTGTGGCATCTCAGCTGGGTCAACTCAACGGCCAAGATCAAGAGACCTCAAAGCACAACCTGTCATGCTTTGGTGATCCAAACATGGCTTTTTGTTCTTCTCCTCCACATGATCATGATCATGACCATGACGTACAACTATCATATCCATACCTACGTACAAGTAGATCCCATCACCAATCTGAAGTCTACAGCAACGAGAATGATCTTTGGAACTTCACCAAATCGCCGTCATCGCCGTCGTCGTCAGACCCACTGTGCCACTTGTCTGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009832 GO:0009834 GO:0009889 GO:0009891 GO:0009893 GO:0009900 GO:0009987 GO:0010047 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032504 GO:0042546 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044085 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048609 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

437

Amino Acids

50.16

Weight (kDa)

6.17

Isoelectric Point (pI)

53.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32770
fragaria_vesca	FvH4_5g10690
malus_domestica	MD06G1121400.v1.1 MD14G1137900.v1.1
prunus_persica	Prupe.5G131900_v2.0.a1
pyrus_communis	pycom06g11260 pycom14g11310
rosa_chinensis	RchiOBHm_Chr7g0187451
rosa_laevigata	RLG00000004780
rosa_multiflora	Rmu_sc0001230.1_g000011
rosa_roxburghii	Rroxscaffold_3G00267410
rosa_rugosa	Rorug06G0481700
rosa_samantha	Rh7AG086200 Rh7BG087700 Rh7CG087100 Rh7DG088700
rosa_wichuraiana	Rw7G007610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	122
Acc65I	GGTACC	1 cut(s)	10
AccB1I	GGYRCC	1 cut(s)	10
AccB7I	CCANNNNNTGG	1 cut(s)	953
AccI	GTMKAC	1 cut(s)	1224
AciI	CCGC	5 cut(s)	8, 80, 436, 456, 1033
AclWI	GGATC	4 cut(s)	141, 542, 1106, 1197
AcoI	YGGCCR	4 cut(s)	157, 597, 609, 1066
AcuI	CTGAAG	1 cut(s)	1239
AfaI	GTAC	7 cut(s)	12, 350, 377, 761, 995, 1170, 1195
AfiI	CCNNNNNNNGG	7 cut(s)	246, 420, 435, 618, 953, 1005, 1039
AgsI	TTSAA	8 cut(s)	64, 308, 594, 643, 805, 886, 936, 980
AjnI	CCWGG	2 cut(s)	897, 1004
AluBI	AGCT	8 cut(s)	57, 208, 289, 509, 781, 882, 890, 1051
AluI	AGCT	8 cut(s)	57, 208, 289, 509, 781, 882, 890, 1051
Alw21I	GWGCWC	1 cut(s)	511
Alw26I	GTCTC	2 cut(s)	168, 1073
AlwI	GGATC	4 cut(s)	141, 542, 1106, 1197
Ama87I	CYCGRG	2 cut(s)	290, 842
AoxI	GGCC	7 cut(s)	157, 237, 426, 597, 609, 900, 1066
ApeKI	GCWGC	1 cut(s)	410
Asp718I	GGTACC	1 cut(s)	10
AspS9I	GGNCC	1 cut(s)	874
AsuC2I	CCSGG	2 cut(s)	177, 415
AsuHPI	GGTGA	4 cut(s)	69, 1121, 1202, 1246
AvaI	CYCGRG	2 cut(s)	290, 842
AvaII	GGWCC	1 cut(s)	874
BaeI	ACNNNNGTAYC	3 cut(s)	27, 743, 776
BanI	GGYRCC	1 cut(s)	10
BanII	GRGCYC	3 cut(s)	511, 677, 851
Bbv12I	GWGCWC	1 cut(s)	511
BbvCI	CCTCAGC	1 cut(s)	129
BbvI	GCAGC	1 cut(s)	397
BccI	CCATC	4 cut(s)	198, 611, 728, 1215
BceAI	ACGGC	5 cut(s)	172, 423, 1081, 1249, 1258
BciT130I	CCWGG	2 cut(s)	899, 1006
BclI	TGATCA	4 cut(s)	745, 868, 1147, 1153
BcnI	CCSGG	2 cut(s)	177, 415
BcoDI	GTCTC	2 cut(s)	168, 1073
BfaI	CTAG	1 cut(s)	54
BfmI	CTRYAG	2 cut(s)	451, 1225
BisI	GCNGC	2 cut(s)	411, 457
BlsI	GCNGC	2 cut(s)	412, 458
Bme1390I	CCNGG	4 cut(s)	177, 415, 899, 1006
Bme18I	GGWCC	1 cut(s)	874
BmeT110I	CYCGRG	2 cut(s)	290, 842
BmgT120I	GGNCC	1 cut(s)	874
BmiI	GGNNCC	3 cut(s)	12, 188, 328
BmrFI	CCNGG	4 cut(s)	177, 415, 899, 1006
BmrI	ACTGGG	2 cut(s)	968, 1027
BmsI	GCATC	3 cut(s)	838, 903, 1052
BmuI	ACTGGG	2 cut(s)	968, 1027
BplI	GAGNNNNNCTC	4 cut(s)	496, 528, 838, 870
Bpu10I	CCTNAGC	1 cut(s)	129
BpuEI	CTTGAG	1 cut(s)	150
BpuMI	CCSGG	2 cut(s)	177, 415
BsaAI	YACGTR	1 cut(s)	1193
BsaBI	GATNNNNATC	1 cut(s)	1152
BsaI	GGTCTC	1 cut(s)	1073
BsaJI	CCNNGG	3 cut(s)	296, 693, 836
BsaWI	WCCGGW	1 cut(s)	383
Bsc4I	CCNNNNNNNGG	7 cut(s)	246, 420, 435, 618, 953, 1005, 1039
Bse1I	ACTGG	3 cut(s)	160, 974, 1022
Bse8I	GATNNNNATC	1 cut(s)	1152
BseBI	CCWGG	2 cut(s)	899, 1006
BseDI	CCNNGG	3 cut(s)	296, 693, 836
BseGI	GGATG	1 cut(s)	190
BseJI	GATNNNNATC	1 cut(s)	1152
BseLI	CCNNNNNNNGG	7 cut(s)	246, 420, 435, 618, 953, 1005, 1039
BseMII	CTCAG	4 cut(s)	120, 189, 215, 1061
BseNI	ACTGG	3 cut(s)	160, 974, 1022
BseRI	GAGGAG	4 cut(s)	215, 218, 501, 1128
BseXI	GCAGC	1 cut(s)	397
BseYI	CCCAGC	1 cut(s)	1051
Bsh1285I	CGRYCG	1 cut(s)	384
BshFI	GGCC	7 cut(s)	159, 239, 428, 599, 611, 902, 1068
BshNI	GGYRCC	1 cut(s)	10
BsiEI	CGRYCG	1 cut(s)	384
BsiHKAI	GWGCWC	1 cut(s)	511
BsiHKCI	CYCGRG	2 cut(s)	290, 842
BsiSI	CCGG	3 cut(s)	176, 384, 414
BslFI	GGGAC	1 cut(s)	452
BslI	CCNNNNNNNGG	7 cut(s)	246, 420, 435, 618, 953, 1005, 1039
BsmAI	GTCTC	2 cut(s)	168, 1073
BsmFI	GGGAC	1 cut(s)	452
BsnI	GGCC	7 cut(s)	159, 239, 428, 599, 611, 902, 1068
Bso31I	GGTCTC	1 cut(s)	1073
BsoBI	CYCGRG	2 cut(s)	290, 842
Bsp1286I	GDGCHC	3 cut(s)	511, 677, 851
Bsp1407I	TGTACA	1 cut(s)	759
Bsp19I	CCATGG	2 cut(s)	296, 693
BspACI	CCGC	5 cut(s)	8, 80, 436, 456, 1033
BspANI	GGCC	7 cut(s)	159, 239, 428, 599, 611, 902, 1068
BspCNI	CTCAG	4 cut(s)	121, 190, 216, 1060
BspHI	TCATGA	3 cut(s)	985, 1150, 1156
BspLI	GGNNCC	3 cut(s)	12, 188, 328
BspPI	GGATC	4 cut(s)	141, 542, 1106, 1197
BspT107I	GGYRCC	1 cut(s)	10
BspTNI	GGTCTC	1 cut(s)	1073
BsrGI	TGTACA	1 cut(s)	759
BsrI	ACTGG	3 cut(s)	160, 974, 1022
BssECI	CCNNGG	3 cut(s)	296, 693, 836
BssT1I	CCWWGG	3 cut(s)	296, 693, 836
Bst2UI	CCWGG	2 cut(s)	899, 1006
Bst4CI	ACNGT	4 cut(s)	583, 722, 878, 1293
Bst6I	CTCTTC	1 cut(s)	861
BstAPI	GCANNNNNTGC	1 cut(s)	410
BstAUI	TGTACA	1 cut(s)	759
BstBAI	YACGTR	1 cut(s)	1193
BstC8I	GCNNGC	2 cut(s)	779, 892
BstDEI	CTNAG	5 cut(s)	129, 198, 224, 667, 1047
BstDSI	CCRYGG	2 cut(s)	296, 693
BstENI	CCTNNNNNAGG	1 cut(s)	244
BstF5I	GGATG	1 cut(s)	190
BstMAI	GTCTC	2 cut(s)	168, 1073
BstMCI	CGRYCG	1 cut(s)	384
BstMWI	GCNNNNNNNGC	2 cut(s)	410, 1270
BstNI	CCWGG	2 cut(s)	899, 1006
BstSCI	CCNGG	4 cut(s)	175, 413, 897, 1004
BstSFI	CTRYAG	2 cut(s)	451, 1225
BstSNI	TACGTA	1 cut(s)	1193
BstV1I	GCAGC	1 cut(s)	397
BstX2I	RGATCY	1 cut(s)	1202
BstYI	RGATCY	1 cut(s)	1202
BsuRI	GGCC	7 cut(s)	159, 239, 428, 599, 611, 902, 1068
BtgI	CCRYGG	2 cut(s)	296, 693
BtgZI	GCGATG	1 cut(s)	1254
BtsCI	GGATG	1 cut(s)	190
BtsIMutI	CAGTG	1 cut(s)	1289
Cac8I	GCNNGC	2 cut(s)	779, 892
CciI	TCATGA	3 cut(s)	985, 1150, 1156
Cfr13I	GGNCC	1 cut(s)	874
CseI	GACGC	1 cut(s)	493
Csp6I	GTAC	7 cut(s)	11, 349, 376, 760, 994, 1169, 1194
CviQI	GTAC	7 cut(s)	11, 349, 376, 760, 994, 1169, 1194
DdeI	CTNAG	5 cut(s)	129, 198, 224, 667, 1047
EaeI	YGGCCR	4 cut(s)	157, 597, 609, 1066
Eam1104I	CTCTTC	1 cut(s)	861
EarI	CTCTTC	1 cut(s)	861
Ecl136II	GAGCTC	1 cut(s)	509
Eco105I	TACGTA	1 cut(s)	1193
Eco130I	CCWWGG	3 cut(s)	296, 693, 836
Eco24I	GRGCYC	3 cut(s)	511, 677, 851
Eco31I	GGTCTC	1 cut(s)	1073
Eco32I	GATATC	1 cut(s)	24
Eco47I	GGWCC	1 cut(s)	874
Eco53kI	GAGCTC	1 cut(s)	509
Eco57I	CTGAAG	1 cut(s)	1239
Eco88I	CYCGRG	2 cut(s)	290, 842
EcoICRI	GAGCTC	1 cut(s)	509
EcoNI	CCTNNNNNAGG	1 cut(s)	244
EcoRII	CCWGG	2 cut(s)	897, 1004
EcoRV	GATATC	1 cut(s)	24
EcoT14I	CCWWGG	3 cut(s)	296, 693, 836
EcoT22I	ATGCAT	2 cut(s)	543, 831
EcoT38I	GRGCYC	3 cut(s)	511, 677, 851
ErhI	CCWWGG	3 cut(s)	296, 693, 836
FaqI	GGGAC	1 cut(s)	452
FauI	CCCGC	1 cut(s)	429
FauNDI	CATATG	1 cut(s)	138
FbaI	TGATCA	4 cut(s)	745, 868, 1147, 1153
FblI	GTMKAC	1 cut(s)	1224
Fnu4HI	GCNGC	2 cut(s)	411, 457
FokI	GGATG	1 cut(s)	177
FriOI	GRGCYC	3 cut(s)	511, 677, 851
Fsp4HI	GCNGC	2 cut(s)	411, 457
FspBI	CTAG	1 cut(s)	54
GluI	GCNGC	2 cut(s)	411, 457
GsaI	CCCAGC	1 cut(s)	1055
HaeIII	GGCC	7 cut(s)	159, 239, 428, 599, 611, 902, 1068
HapII	CCGG	3 cut(s)	176, 384, 414
HgaI	GACGC	1 cut(s)	493
HincII	GTYRAC	1 cut(s)	1058
HindII	GTYRAC	1 cut(s)	1058
HindIII	AAGCTT	1 cut(s)	888
HinfI	GANTC	4 cut(s)	142, 265, 602, 698
HpaII	CCGG	3 cut(s)	176, 384, 414
HphI	GGTGA	4 cut(s)	69, 1121, 1202, 1246
Hpy166II	GTNNAC	2 cut(s)	1058, 1225
Hpy188I	TCNGA	7 cut(s)	225, 529, 660, 750, 817, 1219, 1285
Hpy8I	GTNNAC	2 cut(s)	1058, 1225
Hpy99I	CGWCG	2 cut(s)	1279, 1282
HpyAV	CCTTC	5 cut(s)	70, 418, 697, 762, 939
HpyCH4III	ACNGT	4 cut(s)	583, 722, 878, 1293
HpyCH4IV	ACGT	2 cut(s)	1167, 1192
HpyCH4V	TGCA	4 cut(s)	318, 541, 777, 829
HpyF10VI	GCNNNNNNNGC	2 cut(s)	410, 1270
HpyF3I	CTNAG	5 cut(s)	129, 198, 224, 667, 1047
HpySE526I	ACGT	2 cut(s)	1167, 1192
KpnI	GGTACC	1 cut(s)	14
Ksp22I	TGATCA	4 cut(s)	745, 868, 1147, 1153
LmnI	GCTCC	3 cut(s)	62, 205, 514
Lsp1109I	GCAGC	1 cut(s)	397
LweI	GCATC	3 cut(s)	838, 903, 1052
MaeI	CTAG	1 cut(s)	54
MaeII	ACGT	2 cut(s)	1167, 1192
MaeIII	GTNAC	2 cut(s)	359, 959
MboII	GAAGA	9 cut(s)	241, 477, 626, 658, 661, 848, 924, 992, 1125
MflI	RGATCY	1 cut(s)	1202
MhlI	GDGCHC	3 cut(s)	511, 677, 851
MluCI	AATT	4 cut(s)	64, 468, 589, 652
MlyI	GAGTC	1 cut(s)	611
MmeI	TCCRAC	3 cut(s)	218, 507, 884
Mph1103I	ATGCAT	2 cut(s)	543, 831
MslI	CAYNNNNRTG	4 cut(s)	761, 1149, 1155, 1161
MspA1I	CMGCKG	2 cut(s)	456, 1051
MspI	CCGG	3 cut(s)	176, 384, 414
MspR9I	CCNGG	4 cut(s)	177, 415, 899, 1006
MvaI	CCWGG	2 cut(s)	899, 1006
MwoI	GCNNNNNNNGC	2 cut(s)	410, 1270
NciI	CCSGG	2 cut(s)	177, 415
NcoI	CCATGG	2 cut(s)	296, 693
NdeI	CATATG	1 cut(s)	138
NlaIV	GGNNCC	3 cut(s)	12, 188, 328
NmeAIII	GCCGAG	2 cut(s)	625, 659
NmuCI	GTSAC	2 cut(s)	359, 959
NsiI	ATGCAT	2 cut(s)	543, 831
PaeR7I	CTCGAG	2 cut(s)	290, 842
PagI	TCATGA	3 cut(s)	985, 1150, 1156
PcsI	WCGNNNNNNNCGW	1 cut(s)	1277
PfeI	GAWTC	3 cut(s)	142, 265, 698
PflMI	CCANNNNNTGG	1 cut(s)	953
PkrI	GCNGC	2 cut(s)	412, 458
PleI	GAGTC	1 cut(s)	610
PpsI	GAGTC	1 cut(s)	610
Ppu21I	YACGTR	1 cut(s)	1193
PsiI	TTATAA	1 cut(s)	122
Psp124BI	GAGCTC	1 cut(s)	511
Psp6I	CCWGG	2 cut(s)	897, 1004
PspFI	CCCAGC	1 cut(s)	1051
PspGI	CCWGG	2 cut(s)	897, 1004
PspN4I	GGNNCC	3 cut(s)	12, 188, 328
PspPI	GGNCC	1 cut(s)	874
PspXI	VCTCGAGB	1 cut(s)	290
PsuI	RGATCY	1 cut(s)	1202
PvuII	CAGCTG	1 cut(s)	1051
RsaI	GTAC	7 cut(s)	12, 350, 377, 761, 995, 1170, 1195
RsaNI	GTAC	7 cut(s)	11, 349, 376, 760, 994, 1169, 1194
RseI	CAYNNNNRTG	4 cut(s)	761, 1149, 1155, 1161
SacI	GAGCTC	1 cut(s)	511
SatI	GCNGC	2 cut(s)	411, 457
Sau96I	GGNCC	1 cut(s)	874
SchI	GAGTC	1 cut(s)	611
ScrFI	CCNGG	4 cut(s)	177, 415, 899, 1006
SduI	GDGCHC	3 cut(s)	511, 677, 851
SfaNI	GCATC	3 cut(s)	838, 903, 1052
SfcI	CTRYAG	2 cut(s)	451, 1225
Sfr274I	CTCGAG	2 cut(s)	290, 842
SinI	GGWCC	1 cut(s)	874
SlaI	CTCGAG	2 cut(s)	290, 842
SmiMI	CAYNNNNRTG	4 cut(s)	761, 1149, 1155, 1161
SmlI	CTYRAG	3 cut(s)	165, 290, 842
SmoI	CTYRAG	3 cut(s)	165, 290, 842
SnaBI	TACGTA	1 cut(s)	1193
Sse9I	AATT	4 cut(s)	64, 468, 589, 652
SsiI	CCGC	5 cut(s)	8, 80, 436, 456, 1033
SspMI	CTAG	1 cut(s)	54
SstI	GAGCTC	1 cut(s)	511
StyD4I	CCNGG	4 cut(s)	175, 413, 897, 1004
StyI	CCWWGG	3 cut(s)	296, 693, 836
TaaI	ACNGT	4 cut(s)	583, 722, 878, 1293
TaiI	ACGT	2 cut(s)	1170, 1195
TaqI	TCGA	5 cut(s)	268, 291, 391, 783, 843
TasI	AATT	4 cut(s)	64, 468, 589, 652
TatI	WGTACW	1 cut(s)	759
TauI	GCSGC	1 cut(s)	459
TfiI	GAWTC	3 cut(s)	142, 265, 698
TscAI	CASTG	1 cut(s)	1296
TseFI	GTSAC	2 cut(s)	359, 959
TseI	GCWGC	1 cut(s)	410
Tsp45I	GTSAC	2 cut(s)	359, 959
TspDTI	ATGAA	3 cut(s)	155, 558, 573
TspRI	CASTG	1 cut(s)	1296
Van91I	CCANNNNNTGG	1 cut(s)	953
VpaK11BI	GGWCC	1 cut(s)	874
XagI	CCTNNNNNAGG	1 cut(s)	244
XcmI	CCANNNNNNNNNTGG	2 cut(s)	342, 950
XhoI	CTCGAG	2 cut(s)	290, 842
XmiI	GTMKAC	1 cut(s)	1224
XspI	CTAG	1 cut(s)	54
Zsp2I	ATGCAT	2 cut(s)	543, 831

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.