Prupe.5G170800_v2.0.a1

Glutaredoxin

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
14613240 .. 14614955
1716 bp
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UTR
Exon/CDS
Intron
Prupe.5G170800.1

Sequence Viewer

Length: 363 bp
ATGGGTTCTCTGTTAACCAAGAGTATCAGCAAGGAACAGCTTGAAATGGCGGTCAGCAAGGTCAAGACCATCGTTAACTCCAACCCAGTTGTCGTCTTCAGTAAGACTTACTGTGGTTATTGCAAGAGGGTAAAGCAGCTGCTCACTCAGCTTGGAGCAACTTACAAGGTCATTGAACTGGATGAGGGAACTGATGGAGATGAAACTCAAGCAGCTCTAGCAGAGTGGACTGGACAAAGGACTGTGCCTAATGTCTTTATTGGGGGAAAACACATTGGTGGTTGTGACTCTGTTTTAGAGAAGCACCAGGCGGGTCACCTTCTGCCCCTTCTCAGTGAGGCTGGTGCCATTGCCTCTAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

12.85

Weight (kDa)

7.72

Isoelectric Point (pI)

25.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016216)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G63030
fragaria_vesca FvH4_5g05560
malus_domestica MD14G1176900.v1.1
prunus_persica Prupe.5G170800_v2.0.a1
pyrus_communis pycom14g14770
rosa_chinensis RchiOBHm_Chr7g0193211
rosa_laevigata RLG00000004286
rosa_multiflora Rmu_ssc0000092.1_g000022
rosa_roxburghii Rroxscaffold_3G00262280
rosa_rugosa Rorug07G0008300
rosa_samantha Rh7AG133800 Rh7BG134800 Rh7CG137700 Rh7DG135800
rosa_wichuraiana Rw7G011440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 344
AciI CCGC 2 cut(s) 50, 311
AcuI CTGAAG 1 cut(s) 82
AgsI TTSAA 2 cut(s) 44, 176
AjnI CCWGG 1 cut(s) 306
AleI CACNNNNGTG 1 cut(s) 276
AluBI AGCT 4 cut(s) 40, 139, 151, 215
AluI AGCT 4 cut(s) 40, 139, 151, 215
ApeKI GCWGC 3 cut(s) 136, 139, 212
AsuHPI GGTGA 1 cut(s) 308
BanI GGYRCC 1 cut(s) 344
BbsI GAAGAC 1 cut(s) 88
BbvI GCAGC 3 cut(s) 126, 148, 224
BccI CCATC 2 cut(s) 77, 188
BciT130I CCWGG 1 cut(s) 308
BfaI CTAG 1 cut(s) 218
BisI GCNGC 3 cut(s) 137, 140, 213
BlsI GCNGC 3 cut(s) 138, 141, 214
Bme1390I CCNGG 1 cut(s) 308
BmiI GGNNCC 1 cut(s) 346
BmrFI CCNGG 1 cut(s) 308
BmrI ACTGGG 1 cut(s) 80
BmuI ACTGGG 1 cut(s) 80
BpiI GAAGAC 1 cut(s) 88
BpuEI CTTGAG 1 cut(s) 192
Bse1I ACTGG 3 cut(s) 86, 183, 235
Bse3DI GCAATG 1 cut(s) 348
BseBI CCWGG 1 cut(s) 308
BseGI GGATG 1 cut(s) 187
BseMI GCAATG 1 cut(s) 348
BseMII CTCAG 2 cut(s) 161, 346
BseNI ACTGG 3 cut(s) 86, 183, 235
BseXI GCAGC 3 cut(s) 126, 148, 224
BshNI GGYRCC 1 cut(s) 344
BspACI CCGC 2 cut(s) 50, 311
BspCNI CTCAG 2 cut(s) 160, 345
BspLI GGNNCC 1 cut(s) 346
BspT107I GGYRCC 1 cut(s) 344
BsrDI GCAATG 1 cut(s) 348
BsrI ACTGG 3 cut(s) 86, 183, 235
Bst2UI CCWGG 1 cut(s) 308
Bst4CI ACNGT 2 cut(s) 113, 244
BstDEI CTNAG 3 cut(s) 147, 332, 357
BstEII GGTNACC 1 cut(s) 314
BstF5I GGATG 1 cut(s) 187
BstMWI GCNNNNNNNGC 2 cut(s) 148, 218
BstNI CCWGG 1 cut(s) 308
BstPI GGTNACC 1 cut(s) 314
BstSCI CCNGG 1 cut(s) 306
BstV1I GCAGC 3 cut(s) 126, 148, 224
BstV2I GAAGAC 1 cut(s) 88
BtsCI GGATG 1 cut(s) 187
BtsIMutI CAGTG 1 cut(s) 340
CviJI RGCY 5 cut(s) 40, 139, 151, 215, 341
CviKI_1 RGCY 5 cut(s) 40, 139, 151, 215, 341
DdeI CTNAG 3 cut(s) 147, 332, 357
Eco57I CTGAAG 1 cut(s) 82
Eco91I GGTNACC 1 cut(s) 314
EcoO65I GGTNACC 1 cut(s) 314
EcoRII CCWGG 1 cut(s) 306
FauI CCCGC 1 cut(s) 304
Fnu4HI GCNGC 3 cut(s) 137, 140, 213
FokI GGATG 1 cut(s) 194
Fsp4HI GCNGC 3 cut(s) 137, 140, 213
FspBI CTAG 1 cut(s) 218
GluI GCNGC 3 cut(s) 137, 140, 213
HincII GTYRAC 2 cut(s) 15, 76
HindII GTYRAC 2 cut(s) 15, 76
HinfI GANTC 1 cut(s) 287
HpaI GTTAAC 2 cut(s) 15, 76
HphI GGTGA 1 cut(s) 308
Hpy166II GTNNAC 3 cut(s) 15, 76, 228
Hpy188III TCNNGA 1 cut(s) 64
Hpy8I GTNNAC 3 cut(s) 15, 76, 228
HpyAV CCTTC 2 cut(s) 329, 338
HpyCH4III ACNGT 2 cut(s) 113, 244
HpyCH4V TGCA 1 cut(s) 123
HpyF10VI GCNNNNNNNGC 2 cut(s) 148, 218
HpyF3I CTNAG 3 cut(s) 147, 332, 357
KspAI GTTAAC 2 cut(s) 15, 76
LmnI GCTCC 1 cut(s) 155
LpnPI CCDG 6 cut(s) 99, 164, 216, 293, 320, 327
Lsp1109I GCAGC 3 cut(s) 126, 148, 224
MaeI CTAG 1 cut(s) 218
MaeIII GTNAC 2 cut(s) 284, 314
MboII GAAGA 1 cut(s) 88
MlyI GAGTC 1 cut(s) 281
MmeI TCCRAC 1 cut(s) 105
MnlI CCTC 3 cut(s) 120, 178, 331
MseI TTAA 2 cut(s) 14, 75
MslI CAYNNNNRTG 1 cut(s) 276
MspA1I CMGCKG 1 cut(s) 139
MspR9I CCNGG 1 cut(s) 308
MvaI CCWGG 1 cut(s) 308
MwoI GCNNNNNNNGC 2 cut(s) 148, 218
NlaIV GGNNCC 1 cut(s) 346
NmuCI GTSAC 2 cut(s) 284, 314
OliI CACNNNNGTG 1 cut(s) 276
PkrI GCNGC 3 cut(s) 138, 141, 214
PleI GAGTC 1 cut(s) 281
PpsI GAGTC 1 cut(s) 281
Psp6I CCWGG 1 cut(s) 306
PspEI GGTNACC 1 cut(s) 314
PspGI CCWGG 1 cut(s) 306
PspN4I GGNNCC 1 cut(s) 346
PvuII CAGCTG 1 cut(s) 139
RseI CAYNNNNRTG 1 cut(s) 276
SaqAI TTAA 2 cut(s) 14, 75
SatI GCNGC 3 cut(s) 137, 140, 213
SchI GAGTC 1 cut(s) 281
ScrFI CCNGG 1 cut(s) 308
SetI ASST 7 cut(s) 42, 63, 141, 153, 171, 217, 321
SmiMI CAYNNNNRTG 1 cut(s) 276
SmlI CTYRAG 1 cut(s) 207
SmoI CTYRAG 1 cut(s) 207
SsiI CCGC 2 cut(s) 50, 311
SspMI CTAG 1 cut(s) 218
StyD4I CCNGG 1 cut(s) 306
TaaI ACNGT 2 cut(s) 113, 244
Tru1I TTAA 2 cut(s) 14, 75
Tru9I TTAA 2 cut(s) 14, 75
TscAI CASTG 1 cut(s) 340
TseFI GTSAC 2 cut(s) 284, 314
TseI GCWGC 3 cut(s) 136, 139, 212
Tsp45I GTSAC 2 cut(s) 284, 314
TspDTI ATGAA 1 cut(s) 216
TspRI CASTG 1 cut(s) 340
XspI CTAG 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.