Prupe.5G194400_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
15811685 .. 15813624
1940 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G194400.1

Sequence Viewer

Length: 1098 bp
ATGAAGGTCATGGTGGCATTAATGGCTGTGACCATCTTTGGCCTCCTCATTGATGGTCACAACTGCAAAATTGTGCAGTTTATATTCGGCGACTCCCTCTCCGACGTCGGAAACAACAAGTACCTAAGCAAGAGCCTTGCCCAAGCAAGCCTGCCATGGTATGGGATTGATTTTGGCAATGGACTGCCTAATGGGAGGTTCTCTAATGGCCGCACAGTTGCTGATATAATAGGTGATAACATGGGCCTCTCAAGGCCACCTGCCTTTCTGGATCCATCTTTAACTGAGGATAAAATTCTAGAAAATGGAGTAAACTATGCCTCCGGAGGTGGTGGAATCTTGAATGAAACTGGTGGCTACTTTATTCAGAGGTTCTCACTCTACAAGCAAATTGAGCTGTTTGAAGGCACACAAACACTGATTAAAAGCAAAATTGGAGCACAAGCAGCAGAGAAGTTCTTCCATGAAGCTCGTTATGTGGTCGCTTTAGGCAGCAACGACTTCATCAACAATTACTTGATGCCAGTTTATAGCGATTCGTGGACTTACAACGATCAAACTTTCATCGACTACATAATGGAAACCCTACAAACACAACTCAAGCTTTTGCACAGCTTAGGGGCAAGGCAGCTGATGGTGTTTGGGCTAGGACCAATGGGCTGTATCCCACTCCAAAGGGTTTTGAGTACATCTGGAGATTGCCAAGATAGAACAAACAAACTAGCTCTCAGCTTCAACAAAGCTGGAAGCAAGCTATTGGAAGACTTGTCCAGCAAGCTTCCTAACGCAAGCTACAGATTCGGTGATGCGTATGATGTCGTCAACGATGTGATCAGCAATCCAGACAAATATGGCTTCAGTAACGCGGACACACCATGCTGCTCATTTGGAAGAATCCGACCGGCTCTGACATGTATCCCTGCATCAGTATTGTGCAAAGACAGAAGCAAATATGTGTTTTGGGATGAGTACCATCCATCAGATGGTGCAAATGAGCTAATTGCTCGTGAGCTCATCAAGAAATTCGGTTTTTCGCGTGTTGATGAAACAAACGGTCCTTCCCCTGCACCCGCCATTGCTCCATCACCAGAGGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

366

Amino Acids

40.1

Weight (kDa)

5.38

Isoelectric Point (pI)

27.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014174)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74460
fragaria_vesca FvH4_5g14860
malus_domestica MD06G1194000.v1.1 MD14G1201200.v1.1
prunus_persica Prupe.5G194400_v2.0.a1
pyrus_communis pycom06g17190 pycom14g16670
rosa_chinensis RchiOBHm_Chr7g0181521
rosa_laevigata RLG00000005186
rosa_multiflora Rmu_sc0004621.1_g000032
rosa_roxburghii Rroxscaffold_3G00271930
rosa_rugosa Rorug06G0442000
rosa_samantha Rh7AG044100 Rh7BG043200 Rh7CG045000 Rh7DG043700
rosa_wichuraiana Rw7G003650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 268
AatII GACGTC 1 cut(s) 108
Acc36I ACCTGC 1 cut(s) 268
AccB7I CCANNNNNTGG 2 cut(s) 161, 983
AccII CGCG 2 cut(s) 866, 1036
AccIII TCCGGA 1 cut(s) 323
AciI CCGC 3 cut(s) 211, 866, 1071
AclWI GGATC 2 cut(s) 266, 279
AcoI YGGCCR 1 cut(s) 208
AcsI RAATTY 2 cut(s) 294, 1022
AcuI CTGAAG 1 cut(s) 841
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 3 cut(s) 122, 688, 971
AfiI CCNNNNNNNGG 2 cut(s) 161, 983
AflIII ACRYGT 1 cut(s) 911
AgsI TTSAA 3 cut(s) 343, 404, 736
Alw21I GWGCWC 2 cut(s) 442, 1014
AlwI GGATC 2 cut(s) 266, 279
AlwNI CAGNNNCTG 1 cut(s) 221
Aor13HI TCCGGA 1 cut(s) 323
AoxI GGCC 4 cut(s) 40, 208, 244, 254
ApeKI GCWGC 4 cut(s) 446, 492, 628, 879
ApoI RAATTY 2 cut(s) 294, 1022
AseI ATTAAT 1 cut(s) 20
Asp700I GAANNNNTTC 1 cut(s) 458
AspS9I GGNCC 3 cut(s) 244, 650, 1055
AsuHPI GGTGA 3 cut(s) 245, 815, 1077
AvaII GGWCC 2 cut(s) 650, 1055
BamHI GGATCC 1 cut(s) 271
BanII GRGCYC 1 cut(s) 1014
BauI CACGAG 1 cut(s) 1005
BbsI GAAGAC 1 cut(s) 768
Bbv12I GWGCWC 2 cut(s) 442, 1014
BbvI GCAGC 4 cut(s) 458, 504, 640, 866
BccI CCATC 8 cut(s) 41, 47, 283, 628, 977, 981, 985, 1090
BciVI GTATCC 2 cut(s) 674, 926
BclI TGATCA 1 cut(s) 831
BfaI CTAG 3 cut(s) 299, 647, 722
BfmI CTRYAG 1 cut(s) 793
BfuAI ACCTGC 1 cut(s) 268
BfuI GTATCC 2 cut(s) 674, 926
BisI GCNGC 5 cut(s) 211, 447, 493, 629, 880
BlsI GCNGC 5 cut(s) 212, 448, 494, 630, 881
Bme18I GGWCC 2 cut(s) 650, 1055
BmgT120I GGNCC 3 cut(s) 244, 650, 1055
BmiI GGNNCC 1 cut(s) 273
BmsI GCATC 3 cut(s) 510, 796, 932
BpiI GAAGAC 1 cut(s) 768
BpmI CTGGAG 1 cut(s) 714
Bpu10I CCTNAGC 2 cut(s) 125, 616
BpuEI CTTGAG 2 cut(s) 235, 584
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 1 cut(s) 155
BsaWI WCCGGW 1 cut(s) 323
BsaXI ACNNNNNCTCC 4 cut(s) 83, 113, 305, 335
Bsc4I CCNNNNNNNGG 2 cut(s) 161, 983
Bse118I RCCGGY 1 cut(s) 901
Bse1I ACTGG 2 cut(s) 355, 524
Bse3DI GCAATG 2 cut(s) 184, 1074
BseAI TCCGGA 1 cut(s) 323
BseDI CCNNGG 1 cut(s) 155
BseGI GGATG 2 cut(s) 970, 973
BseLI CCNNNNNNNGG 2 cut(s) 161, 983
BseMI GCAATG 2 cut(s) 184, 1074
BseMII CTCAG 2 cut(s) 276, 742
BseNI ACTGG 2 cut(s) 355, 524
BseRI GAGGAG 1 cut(s) 35
BseXI GCAGC 4 cut(s) 458, 504, 640, 866
BsgI GTGCAG 2 cut(s) 95, 1050
Bsh1236I CGCG 2 cut(s) 866, 1036
Bsh1285I CGRYCG 1 cut(s) 902
BshFI GGCC 4 cut(s) 42, 210, 246, 256
BsiEI CGRYCG 1 cut(s) 902
BsiHKAI GWGCWC 2 cut(s) 442, 1014
BsiSI CCGG 2 cut(s) 324, 902
BslI CCNNNNNNNGG 2 cut(s) 161, 983
BsnI GGCC 4 cut(s) 42, 210, 246, 256
Bsp1286I GDGCHC 2 cut(s) 442, 1014
Bsp13I TCCGGA 1 cut(s) 323
Bsp143I GATC 3 cut(s) 271, 553, 831
Bsp19I CCATGG 1 cut(s) 155
BspACI CCGC 3 cut(s) 211, 866, 1071
BspANI GGCC 4 cut(s) 42, 210, 246, 256
BspCNI CTCAG 2 cut(s) 277, 741
BspEI TCCGGA 1 cut(s) 323
BspFNI CGCG 2 cut(s) 866, 1036
BspLI GGNNCC 1 cut(s) 273
BspMI ACCTGC 1 cut(s) 268
BspPI GGATC 2 cut(s) 266, 279
BsrDI GCAATG 2 cut(s) 184, 1074
BsrFI RCCGGY 1 cut(s) 901
BsrI ACTGG 2 cut(s) 355, 524
BssAI RCCGGY 1 cut(s) 901
BssECI CCNNGG 1 cut(s) 155
BssMI GATC 3 cut(s) 271, 553, 831
BssNI GRCGYC 1 cut(s) 105
BssSI CACGAG 1 cut(s) 1005
BssT1I CCWWGG 1 cut(s) 155
Bst2BI CACGAG 1 cut(s) 1005
Bst4CI ACNGT 2 cut(s) 217, 1055
BstACI GRCGYC 1 cut(s) 105
BstC8I GCNNGC 5 cut(s) 148, 152, 752, 776, 790
BstDEI CTNAG 4 cut(s) 125, 285, 616, 728
BstDSI CCRYGG 1 cut(s) 155
BstF5I GGATG 2 cut(s) 970, 973
BstFNI CGCG 2 cut(s) 866, 1036
BstKTI GATC 3 cut(s) 274, 556, 834
BstMBI GATC 3 cut(s) 271, 553, 831
BstMCI CGRYCG 1 cut(s) 902
BstMWI GCNNNNNNNGC 3 cut(s) 23, 394, 446
BstNSI RCATGY 1 cut(s) 915
BstSFI CTRYAG 1 cut(s) 793
BstUI CGCG 2 cut(s) 866, 1036
BstV1I GCAGC 4 cut(s) 458, 504, 640, 866
BstV2I GAAGAC 1 cut(s) 768
BstX2I RGATCY 1 cut(s) 271
BstYI RGATCY 1 cut(s) 271
BsuI GTATCC 2 cut(s) 674, 926
BsuRI GGCC 4 cut(s) 42, 210, 246, 256
BtgI CCRYGG 1 cut(s) 155
BtsCI GGATG 2 cut(s) 970, 973
BtsIMutI CAGTG 1 cut(s) 416
BveI ACCTGC 1 cut(s) 268
Cac8I GCNNGC 5 cut(s) 148, 152, 752, 776, 790
CaiI CAGNNNCTG 1 cut(s) 221
Cfr10I RCCGGY 1 cut(s) 901
Cfr13I GGNCC 3 cut(s) 244, 650, 1055
Csp6I GTAC 3 cut(s) 121, 687, 970
CviAII CATG 6 cut(s) 10, 156, 241, 464, 876, 912
CviQI GTAC 3 cut(s) 121, 687, 970
DdeI CTNAG 4 cut(s) 125, 285, 616, 728
DpnI GATC 3 cut(s) 273, 555, 833
DpnII GATC 3 cut(s) 271, 553, 831
EaeI YGGCCR 1 cut(s) 208
Ecl136II GAGCTC 1 cut(s) 1012
Eco130I CCWWGG 1 cut(s) 155
Eco24I GRGCYC 1 cut(s) 1014
Eco47I GGWCC 2 cut(s) 650, 1055
Eco53kI GAGCTC 1 cut(s) 1012
Eco57I CTGAAG 1 cut(s) 841
EcoICRI GAGCTC 1 cut(s) 1012
EcoT14I CCWWGG 1 cut(s) 155
EcoT38I GRGCYC 1 cut(s) 1014
ErhI CCWWGG 1 cut(s) 155
FaeI CATG 6 cut(s) 13, 159, 244, 467, 879, 915
FatI CATG 6 cut(s) 9, 155, 240, 463, 875, 911
FauI CCCGC 1 cut(s) 1078
FbaI TGATCA 1 cut(s) 831
Fnu4HI GCNGC 5 cut(s) 211, 447, 493, 629, 880
FokI GGATG 2 cut(s) 960, 977
FriOI GRGCYC 1 cut(s) 1014
Fsp4HI GCNGC 5 cut(s) 211, 447, 493, 629, 880
FspBI CTAG 3 cut(s) 299, 647, 722
GluI GCNGC 5 cut(s) 211, 447, 493, 629, 880
GsuI CTGGAG 1 cut(s) 714
HaeIII GGCC 4 cut(s) 42, 210, 246, 256
HapII CCGG 2 cut(s) 324, 902
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 6 cut(s) 13, 159, 244, 467, 879, 915
HincII GTYRAC 1 cut(s) 823
HindII GTYRAC 1 cut(s) 823
HindIII AAGCTT 2 cut(s) 602, 776
HinfI GANTC 5 cut(s) 92, 336, 536, 798, 894
HpaII CCGG 2 cut(s) 324, 902
HphI GGTGA 3 cut(s) 245, 815, 1077
Hpy166II GTNNAC 3 cut(s) 313, 543, 823
Hpy188I TCNGA 6 cut(s) 103, 110, 369, 899, 909, 982
Hpy188III TCNNGA 8 cut(s) 269, 299, 324, 340, 693, 842, 1007, 1018
Hpy8I GTNNAC 3 cut(s) 313, 543, 823
Hpy99I CGWCG 2 cut(s) 107, 110
HpyAV CCTTC 2 cut(s) 398, 1068
HpyCH4III ACNGT 2 cut(s) 217, 1055
HpyCH4IV ACGT 1 cut(s) 105
HpyCH4V TGCA 7 cut(s) 66, 76, 610, 923, 936, 989, 1067
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 394, 446
HpyF3I CTNAG 4 cut(s) 125, 285, 616, 728
HpySE526I ACGT 1 cut(s) 105
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 6 cut(s) 13, 159, 244, 467, 879, 915
Kpn2I TCCGGA 1 cut(s) 323
Ksp22I TGATCA 1 cut(s) 831
Kzo9I GATC 3 cut(s) 271, 553, 831
LmnI GCTCC 2 cut(s) 437, 1084
Lsp1109I GCAGC 4 cut(s) 458, 504, 640, 866
LweI GCATC 3 cut(s) 510, 796, 932
MaeI CTAG 3 cut(s) 299, 647, 722
MaeII ACGT 1 cut(s) 105
MaeIII GTNAC 3 cut(s) 28, 56, 860
MalI GATC 3 cut(s) 273, 555, 833
MboI GATC 3 cut(s) 271, 553, 831
MboII GAAGA 3 cut(s) 451, 773, 903
MflI RGATCY 1 cut(s) 271
MhlI GDGCHC 2 cut(s) 442, 1014
MluCI AATT 7 cut(s) 69, 294, 390, 432, 511, 999, 1022
MlyI GAGTC 1 cut(s) 86
MmeI TCCRAC 3 cut(s) 88, 126, 922
MroI TCCGGA 1 cut(s) 323
MroXI GAANNNNTTC 1 cut(s) 458
MseI TTAA 3 cut(s) 20, 281, 423
MspA1I CMGCKG 1 cut(s) 631
MspI CCGG 2 cut(s) 324, 902
MvnI CGCG 2 cut(s) 866, 1036
MwoI GCNNNNNNNGC 3 cut(s) 23, 394, 446
NcoI CCATGG 1 cut(s) 155
NdeII GATC 3 cut(s) 271, 553, 831
NlaIII CATG 6 cut(s) 13, 159, 244, 467, 879, 915
NlaIV GGNNCC 1 cut(s) 273
NmuCI GTSAC 2 cut(s) 28, 56
NspI RCATGY 1 cut(s) 915
PaqCI CACCTGC 1 cut(s) 268
PciI ACATGT 1 cut(s) 911
PdmI GAANNNNTTC 1 cut(s) 458
PfeI GAWTC 4 cut(s) 336, 536, 798, 894
PflMI CCANNNNNTGG 2 cut(s) 161, 983
PkrI GCNGC 5 cut(s) 212, 448, 494, 630, 881
PleI GAGTC 1 cut(s) 86
PpsI GAGTC 1 cut(s) 86
PscI ACATGT 1 cut(s) 911
PshBI ATTAAT 1 cut(s) 20
Psp124BI GAGCTC 1 cut(s) 1014
PspN4I GGNNCC 1 cut(s) 273
PspPI GGNCC 3 cut(s) 244, 650, 1055
PstNI CAGNNNCTG 1 cut(s) 221
PsuI RGATCY 1 cut(s) 271
PvuII CAGCTG 1 cut(s) 631
RsaI GTAC 3 cut(s) 122, 688, 971
RsaNI GTAC 3 cut(s) 121, 687, 970
SacI GAGCTC 1 cut(s) 1014
SaqAI TTAA 3 cut(s) 20, 281, 423
SatI GCNGC 5 cut(s) 211, 447, 493, 629, 880
Sau3AI GATC 3 cut(s) 271, 553, 831
Sau96I GGNCC 3 cut(s) 244, 650, 1055
SchI GAGTC 1 cut(s) 86
SduI GDGCHC 2 cut(s) 442, 1014
SfaNI GCATC 3 cut(s) 510, 796, 932
SfcI CTRYAG 1 cut(s) 793
SinI GGWCC 2 cut(s) 650, 1055
SmlI CTYRAG 2 cut(s) 250, 599
SmoI CTYRAG 2 cut(s) 250, 599
Sse9I AATT 7 cut(s) 69, 294, 390, 432, 511, 999, 1022
SsiI CCGC 3 cut(s) 211, 866, 1071
SspMI CTAG 3 cut(s) 299, 647, 722
SstI GAGCTC 1 cut(s) 1014
StyI CCWWGG 1 cut(s) 155
TaaI ACNGT 2 cut(s) 217, 1055
TaiI ACGT 1 cut(s) 108
TaqI TCGA 1 cut(s) 567
TasI AATT 7 cut(s) 69, 294, 390, 432, 511, 999, 1022
TatI WGTACW 1 cut(s) 686
TauI GCSGC 1 cut(s) 213
TfiI GAWTC 4 cut(s) 336, 536, 798, 894
Tru1I TTAA 3 cut(s) 20, 281, 423
Tru9I TTAA 3 cut(s) 20, 281, 423
TscAI CASTG 1 cut(s) 423
TseFI GTSAC 2 cut(s) 28, 56
TseI GCWGC 4 cut(s) 446, 492, 628, 879
Tsp45I GTSAC 2 cut(s) 28, 56
TspDTI ATGAA 6 cut(s) 17, 360, 480, 493, 553, 1059
TspRI CASTG 1 cut(s) 423
Van91I CCANNNNNTGG 2 cut(s) 161, 983
VpaK11BI GGWCC 2 cut(s) 650, 1055
VspI ATTAAT 1 cut(s) 20
XapI RAATTY 2 cut(s) 294, 1022
XbaI TCTAGA 1 cut(s) 298
XceI RCATGY 1 cut(s) 915
XcmI CCANNNNNNNNNTGG 1 cut(s) 980
XmnI GAANNNNTTC 1 cut(s) 458
XspI CTAG 3 cut(s) 299, 647, 722
ZraI GACGTC 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.