calcium-binding protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47480 |
| fragaria_vesca | FvH4_5g14810 |
| malus_domestica | MD06G1194700.v1.1 MD14G1201700.v1.1 |
| prunus_persica | Prupe.5G194800_v2.0.a1 |
| pyrus_communis | pycom14g16710 |
| rosa_chinensis | RchiOBHm_Chr7g0181581 |
| rosa_multiflora | Rmu_sc0000988.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00271880 |
| rosa_samantha | Rh7AG044600 Rh7BG043600 Rh7CG045400 Rh7DG044200 |
| rosa_wichuraiana | Rw7G003700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 108 |
| AcsI | RAATTY | 1 cut(s) | 593 |
| AcuI | CTGAAG | 1 cut(s) | 507 |
| AfaI | GTAC | 1 cut(s) | 292 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 108 |
| AgsI | TTSAA | 2 cut(s) | 589, 602 |
| AjnI | CCWGG | 1 cut(s) | 414 |
| AluBI | AGCT | 4 cut(s) | 286, 434, 521, 618 |
| AluI | AGCT | 4 cut(s) | 286, 434, 521, 618 |
| Alw26I | GTCTC | 1 cut(s) | 361 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 108 |
| ApeKI | GCWGC | 2 cut(s) | 30, 180 |
| ApoI | RAATTY | 1 cut(s) | 593 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 435, 597, 617 |
| AsuHPI | GGTGA | 1 cut(s) | 362 |
| BaeGI | GKGCMC | 1 cut(s) | 126 |
| BbvI | GCAGC | 2 cut(s) | 17, 192 |
| BccI | CCATC | 4 cut(s) | 203, 307, 338, 566 |
| BciT130I | CCWGG | 1 cut(s) | 416 |
| BclI | TGATCA | 1 cut(s) | 546 |
| BcoDI | GTCTC | 1 cut(s) | 361 |
| BfaI | CTAG | 2 cut(s) | 119, 323 |
| BisI | GCNGC | 2 cut(s) | 31, 181 |
| BlsI | GCNGC | 2 cut(s) | 32, 182 |
| Bme1390I | CCNGG | 1 cut(s) | 416 |
| BmiI | GGNNCC | 1 cut(s) | 408 |
| BmrFI | CCNGG | 1 cut(s) | 416 |
| BmsI | GCATC | 2 cut(s) | 328, 463 |
| BoxI | GACNNNNGTC | 1 cut(s) | 373 |
| BpmI | CTGGAG | 3 cut(s) | 85, 315, 437 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 83, 113 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 108 |
| Bse1I | ACTGG | 2 cut(s) | 102, 298 |
| Bse3DI | GCAATG | 1 cut(s) | 213 |
| BseBI | CCWGG | 1 cut(s) | 416 |
| BseGI | GGATG | 1 cut(s) | 195 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 108 |
| BseMI | GCAATG | 1 cut(s) | 213 |
| BseNI | ACTGG | 2 cut(s) | 102, 298 |
| BseRI | GAGGAG | 1 cut(s) | 416 |
| BseSI | GKGCMC | 1 cut(s) | 126 |
| BseXI | GCAGC | 2 cut(s) | 17, 192 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 108 |
| BsmAI | GTCTC | 1 cut(s) | 361 |
| BsmI | GAATGC | 1 cut(s) | 539 |
| Bsp1286I | GDGCHC | 1 cut(s) | 126 |
| Bsp143I | GATC | 2 cut(s) | 546, 559 |
| BspHI | TCATGA | 1 cut(s) | 244 |
| BspLI | GGNNCC | 1 cut(s) | 408 |
| BspQI | GCTCTTC | 1 cut(s) | 608 |
| BsrDI | GCAATG | 1 cut(s) | 213 |
| BsrI | ACTGG | 2 cut(s) | 102, 298 |
| BssMI | GATC | 2 cut(s) | 546, 559 |
| Bst2UI | CCWGG | 1 cut(s) | 416 |
| Bst4CI | ACNGT | 1 cut(s) | 13 |
| Bst6I | CTCTTC | 1 cut(s) | 608 |
| BstF5I | GGATG | 1 cut(s) | 195 |
| BstKTI | GATC | 2 cut(s) | 549, 562 |
| BstMAI | GTCTC | 1 cut(s) | 361 |
| BstMBI | GATC | 2 cut(s) | 546, 559 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 186 |
| BstNI | CCWGG | 1 cut(s) | 416 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 373 |
| BstSCI | CCNGG | 1 cut(s) | 414 |
| BstSLI | GKGCMC | 1 cut(s) | 126 |
| BstV1I | GCAGC | 2 cut(s) | 17, 192 |
| BtsCI | GGATG | 1 cut(s) | 195 |
| BtsIMutI | CAGTG | 1 cut(s) | 18 |
| CaiI | CAGNNNCTG | 1 cut(s) | 108 |
| CciI | TCATGA | 1 cut(s) | 244 |
| CseI | GACGC | 1 cut(s) | 127 |
| Csp6I | GTAC | 1 cut(s) | 291 |
| CviAII | CATG | 3 cut(s) | 245, 440, 607 |
| CviJI | RGCY | 8 cut(s) | 30, 38, 286, 414, 434, 521, 554, 618 |
| CviKI_1 | RGCY | 8 cut(s) | 30, 38, 286, 414, 434, 521, 554, 618 |
| CviQI | GTAC | 1 cut(s) | 291 |
| DpnI | GATC | 2 cut(s) | 548, 561 |
| DpnII | GATC | 2 cut(s) | 546, 559 |
| Eam1104I | CTCTTC | 1 cut(s) | 608 |
| EarI | CTCTTC | 1 cut(s) | 608 |
| Eco57I | CTGAAG | 1 cut(s) | 507 |
| EcoRII | CCWGG | 1 cut(s) | 414 |
| FaeI | CATG | 3 cut(s) | 248, 443, 610 |
| FaiI | YATR | 7 cut(s) | 56, 114, 136, 246, 441, 564, 608 |
| FatI | CATG | 3 cut(s) | 244, 439, 606 |
| FbaI | TGATCA | 1 cut(s) | 546 |
| Fnu4HI | GCNGC | 2 cut(s) | 31, 181 |
| FokI | GGATG | 1 cut(s) | 182 |
| Fsp4HI | GCNGC | 2 cut(s) | 31, 181 |
| FspBI | CTAG | 2 cut(s) | 119, 323 |
| GluI | GCNGC | 2 cut(s) | 31, 181 |
| GsuI | CTGGAG | 3 cut(s) | 85, 315, 437 |
| HgaI | GACGC | 1 cut(s) | 127 |
| Hin1II | CATG | 3 cut(s) | 248, 443, 610 |
| HindIII | AAGCTT | 1 cut(s) | 432 |
| HphI | GGTGA | 1 cut(s) | 362 |
| Hpy166II | GTNNAC | 1 cut(s) | 291 |
| Hpy188I | TCNGA | 2 cut(s) | 175, 526 |
| Hpy188III | TCNNGA | 1 cut(s) | 245 |
| Hpy8I | GTNNAC | 1 cut(s) | 291 |
| HpyAV | CCTTC | 2 cut(s) | 251, 565 |
| HpyCH4III | ACNGT | 1 cut(s) | 13 |
| HpyCH4V | TGCA | 6 cut(s) | 157, 213, 341, 476, 503, 537 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 186 |
| Hsp92II | CATG | 3 cut(s) | 248, 443, 610 |
| Ksp22I | TGATCA | 1 cut(s) | 546 |
| Kzo9I | GATC | 2 cut(s) | 546, 559 |
| LguI | GCTCTTC | 1 cut(s) | 608 |
| LmnI | GCTCC | 2 cut(s) | 84, 518 |
| LpnPI | CCDG | 6 cut(s) | 94, 115, 279, 401, 428, 462 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 192 |
| LweI | GCATC | 2 cut(s) | 328, 463 |
| MaeI | CTAG | 2 cut(s) | 119, 323 |
| MalI | GATC | 2 cut(s) | 548, 561 |
| MboI | GATC | 2 cut(s) | 546, 559 |
| MboII | GAAGA | 1 cut(s) | 625 |
| MhlI | GDGCHC | 1 cut(s) | 126 |
| MluCI | AATT | 3 cut(s) | 159, 235, 593 |
| MmeI | TCCRAC | 1 cut(s) | 496 |
| MnlI | CCTC | 4 cut(s) | 355, 394, 397, 412 |
| MroXI | GAANNNNTTC | 3 cut(s) | 435, 597, 617 |
| MseI | TTAA | 2 cut(s) | 72, 234 |
| MslI | CAYNNNNRTG | 1 cut(s) | 249 |
| MspA1I | CMGCKG | 1 cut(s) | 286 |
| MspR9I | CCNGG | 1 cut(s) | 416 |
| Mva1269I | GAATGC | 1 cut(s) | 539 |
| MvaI | CCWGG | 1 cut(s) | 416 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 186 |
| NdeII | GATC | 2 cut(s) | 546, 559 |
| NlaIII | CATG | 3 cut(s) | 248, 443, 610 |
| NlaIV | GGNNCC | 1 cut(s) | 408 |
| PagI | TCATGA | 1 cut(s) | 244 |
| PciSI | GCTCTTC | 1 cut(s) | 608 |
| PctI | GAATGC | 1 cut(s) | 539 |
| PdmI | GAANNNNTTC | 3 cut(s) | 435, 597, 617 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 108 |
| PkrI | GCNGC | 2 cut(s) | 32, 182 |
| PshAI | GACNNNNGTC | 1 cut(s) | 373 |
| Psp6I | CCWGG | 1 cut(s) | 414 |
| PspGI | CCWGG | 1 cut(s) | 414 |
| PspN4I | GGNNCC | 1 cut(s) | 408 |
| PstNI | CAGNNNCTG | 1 cut(s) | 108 |
| PvuII | CAGCTG | 1 cut(s) | 286 |
| RsaI | GTAC | 1 cut(s) | 292 |
| RsaNI | GTAC | 1 cut(s) | 291 |
| RseI | CAYNNNNRTG | 1 cut(s) | 249 |
| SapI | GCTCTTC | 1 cut(s) | 608 |
| SaqAI | TTAA | 2 cut(s) | 72, 234 |
| SatI | GCNGC | 2 cut(s) | 31, 181 |
| Sau3AI | GATC | 2 cut(s) | 546, 559 |
| ScrFI | CCNGG | 1 cut(s) | 416 |
| SduI | GDGCHC | 1 cut(s) | 126 |
| SetI | ASST | 5 cut(s) | 288, 436, 495, 523, 620 |
| SfaNI | GCATC | 2 cut(s) | 328, 463 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 249 |
| Sse9I | AATT | 3 cut(s) | 159, 235, 593 |
| SspMI | CTAG | 2 cut(s) | 119, 323 |
| StyD4I | CCNGG | 1 cut(s) | 414 |
| TaaI | ACNGT | 1 cut(s) | 13 |
| TaqI | TCGA | 1 cut(s) | 558 |
| TasI | AATT | 3 cut(s) | 159, 235, 593 |
| TatI | WGTACW | 1 cut(s) | 290 |
| Tru1I | TTAA | 2 cut(s) | 72, 234 |
| Tru9I | TTAA | 2 cut(s) | 72, 234 |
| TscAI | CASTG | 1 cut(s) | 18 |
| TseI | GCWGC | 2 cut(s) | 30, 180 |
| TspDTI | ATGAA | 7 cut(s) | 233, 261, 267, 273, 428, 457, 606 |
| TspGWI | ACGGA | 1 cut(s) | 582 |
| TspRI | CASTG | 1 cut(s) | 18 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 108 |
| XapI | RAATTY | 1 cut(s) | 593 |
| XmnI | GAANNNNTTC | 3 cut(s) | 435, 597, 617 |
| XspI | CTAG | 2 cut(s) | 119, 323 |