The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47470 |
| fragaria_vesca | FvH4_5g14770 |
| malus_domestica | MD06G1195000.v1.1 MD14G1202000.v1.1 |
| prunus_persica | Prupe.5G195100_v2.0.a1 |
| pyrus_communis | pycom06g17250 pycom14g16730 |
| rosa_chinensis | RchiOBHm_Chr7g0181611 |
| rosa_laevigata | RLG00000005179 |
| rosa_multiflora | Rmu_sc0000988.1_g000017 |
| rosa_roxburghii | Rroxscaffold_3G00271850 |
| rosa_rugosa | Rorug06G0442500 |
| rosa_samantha | Rh7AG044900 Rh7BG043900 Rh7CG045600 Rh7DG044500 |
| rosa_wichuraiana | Rw7G003730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 29 |
| AclWI | GGATC | 3 cut(s) | 233, 361, 374 |
| AcuI | CTGAAG | 1 cut(s) | 366 |
| AdeI | CACNNNGTG | 1 cut(s) | 679 |
| AfaI | GTAC | 1 cut(s) | 410 |
| AgsI | TTSAA | 4 cut(s) | 158, 526, 577, 671 |
| AjnI | CCWGG | 7 cut(s) | 62, 181, 196, 220, 496, 562, 654 |
| AluBI | AGCT | 3 cut(s) | 290, 295, 537 |
| AluI | AGCT | 3 cut(s) | 290, 295, 537 |
| Alw21I | GWGCWC | 1 cut(s) | 297 |
| Alw26I | GTCTC | 1 cut(s) | 628 |
| AlwI | GGATC | 3 cut(s) | 233, 361, 374 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 32 |
| AoxI | GGCC | 5 cut(s) | 21, 41, 119, 189, 606 |
| ApeKI | GCWGC | 1 cut(s) | 712 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 218, 250 |
| AspS9I | GGNCC | 3 cut(s) | 120, 259, 692 |
| AsuHPI | GGTGA | 3 cut(s) | 182, 186, 236 |
| AvaII | GGWCC | 2 cut(s) | 259, 692 |
| AxyI | CCTNAGG | 1 cut(s) | 272 |
| BamHI | GGATCC | 1 cut(s) | 366 |
| BanII | GRGCYC | 1 cut(s) | 297 |
| BauI | CACGAG | 1 cut(s) | 296 |
| BbsI | GAAGAC | 2 cut(s) | 72, 209 |
| Bbv12I | GWGCWC | 1 cut(s) | 297 |
| BbvCI | CCTCAGC | 2 cut(s) | 25, 255 |
| BbvI | GCAGC | 1 cut(s) | 724 |
| BccI | CCATC | 3 cut(s) | 142, 303, 527 |
| BciT130I | CCWGG | 7 cut(s) | 64, 183, 198, 222, 498, 564, 656 |
| BcoDI | GTCTC | 1 cut(s) | 628 |
| BfaI | CTAG | 1 cut(s) | 766 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 29 |
| BisI | GCNGC | 2 cut(s) | 30, 713 |
| BlpI | GCTNAGC | 1 cut(s) | 291 |
| BlsI | GCNGC | 2 cut(s) | 31, 714 |
| BmcAI | AGTACT | 1 cut(s) | 410 |
| Bme1390I | CCNGG | 7 cut(s) | 64, 183, 198, 222, 498, 564, 656 |
| Bme18I | GGWCC | 2 cut(s) | 259, 692 |
| BmgT120I | GGNCC | 3 cut(s) | 120, 259, 692 |
| BmiI | GGNNCC | 3 cut(s) | 68, 261, 368 |
| BmrFI | CCNGG | 7 cut(s) | 64, 183, 198, 222, 498, 564, 656 |
| BmrI | ACTGGG | 1 cut(s) | 84 |
| BmsI | GCATC | 5 cut(s) | 57, 324, 382, 425, 579 |
| BmuI | ACTGGG | 1 cut(s) | 84 |
| BpiI | GAAGAC | 2 cut(s) | 72, 209 |
| Bpu10I | CCTNAGC | 2 cut(s) | 25, 255 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 291 |
| BpuEI | CTTGAG | 1 cut(s) | 623 |
| BsaJI | CCNNGG | 6 cut(s) | 123, 496, 562, 609, 655, 728 |
| Bse1I | ACTGG | 4 cut(s) | 79, 214, 642, 688 |
| Bse21I | CCTNAGG | 1 cut(s) | 272 |
| Bse3DI | GCAATG | 2 cut(s) | 321, 648 |
| BseBI | CCWGG | 7 cut(s) | 64, 183, 198, 222, 498, 564, 656 |
| BseDI | CCNNGG | 6 cut(s) | 123, 496, 562, 609, 655, 728 |
| BseGI | GGATG | 1 cut(s) | 339 |
| BseMI | GCAATG | 2 cut(s) | 321, 648 |
| BseMII | CTCAG | 6 cut(s) | 39, 246, 282, 286, 396, 735 |
| BseNI | ACTGG | 4 cut(s) | 79, 214, 642, 688 |
| BseXI | GCAGC | 1 cut(s) | 724 |
| BshFI | GGCC | 5 cut(s) | 23, 43, 121, 191, 608 |
| BsiHKAI | GWGCWC | 1 cut(s) | 297 |
| BslFI | GGGAC | 1 cut(s) | 261 |
| BsmAI | GTCTC | 1 cut(s) | 628 |
| BsmFI | GGGAC | 1 cut(s) | 261 |
| BsmI | GAATGC | 1 cut(s) | 650 |
| BsnI | GGCC | 5 cut(s) | 23, 43, 121, 191, 608 |
| Bsp1286I | GDGCHC | 1 cut(s) | 297 |
| Bsp143I | GATC | 3 cut(s) | 238, 366, 468 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 291 |
| Bsp19I | CCATGG | 2 cut(s) | 123, 728 |
| BspACI | CCGC | 1 cut(s) | 29 |
| BspANI | GGCC | 5 cut(s) | 23, 43, 121, 191, 608 |
| BspCNI | CTCAG | 6 cut(s) | 38, 247, 283, 285, 397, 734 |
| BspLI | GGNNCC | 3 cut(s) | 68, 261, 368 |
| BspPI | GGATC | 3 cut(s) | 233, 361, 374 |
| BsrDI | GCAATG | 2 cut(s) | 321, 648 |
| BsrI | ACTGG | 4 cut(s) | 79, 214, 642, 688 |
| BssECI | CCNNGG | 6 cut(s) | 123, 496, 562, 609, 655, 728 |
| BssMI | GATC | 3 cut(s) | 238, 366, 468 |
| BssSI | CACGAG | 1 cut(s) | 296 |
| BssT1I | CCWWGG | 3 cut(s) | 123, 609, 728 |
| Bst2BI | CACGAG | 1 cut(s) | 296 |
| Bst2UI | CCWGG | 7 cut(s) | 64, 183, 198, 222, 498, 564, 656 |
| Bst4CI | ACNGT | 2 cut(s) | 10, 477 |
| BstC8I | GCNNGC | 2 cut(s) | 397, 539 |
| BstDEI | CTNAG | 7 cut(s) | 25, 255, 272, 291, 405, 721, 755 |
| BstDSI | CCRYGG | 2 cut(s) | 123, 728 |
| BstEII | GGTNACC | 1 cut(s) | 557 |
| BstF5I | GGATG | 1 cut(s) | 339 |
| BstKTI | GATC | 3 cut(s) | 241, 369, 471 |
| BstMAI | GTCTC | 1 cut(s) | 628 |
| BstMBI | GATC | 3 cut(s) | 238, 366, 468 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 29, 401, 647 |
| BstNI | CCWGG | 7 cut(s) | 64, 183, 198, 222, 498, 564, 656 |
| BstPI | GGTNACC | 1 cut(s) | 557 |
| BstSCI | CCNGG | 7 cut(s) | 62, 181, 196, 220, 496, 562, 654 |
| BstV1I | GCAGC | 1 cut(s) | 724 |
| BstV2I | GAAGAC | 2 cut(s) | 72, 209 |
| BstX2I | RGATCY | 1 cut(s) | 366 |
| BstYI | RGATCY | 1 cut(s) | 366 |
| Bsu36I | CCTNAGG | 1 cut(s) | 272 |
| BsuRI | GGCC | 5 cut(s) | 23, 43, 121, 191, 608 |
| BtgI | CCRYGG | 2 cut(s) | 123, 728 |
| BtsCI | GGATG | 1 cut(s) | 339 |
| BtsIMutI | CAGTG | 1 cut(s) | 207 |
| Cac8I | GCNNGC | 2 cut(s) | 397, 539 |
| CaiI | CAGNNNCTG | 1 cut(s) | 32 |
| Cfr13I | GGNCC | 3 cut(s) | 120, 259, 692 |
| Csp6I | GTAC | 1 cut(s) | 409 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 534, 569 |
| CviAII | CATG | 3 cut(s) | 45, 124, 729 |
| CviQI | GTAC | 1 cut(s) | 409 |
| DdeI | CTNAG | 7 cut(s) | 25, 255, 272, 291, 405, 721, 755 |
| DpnI | GATC | 3 cut(s) | 240, 368, 470 |
| DpnII | GATC | 3 cut(s) | 238, 366, 468 |
| DraI | TTTAAA | 1 cut(s) | 151 |
| DraIII | CACNNNGTG | 1 cut(s) | 679 |
| Ecl136II | GAGCTC | 1 cut(s) | 295 |
| Eco130I | CCWWGG | 3 cut(s) | 123, 609, 728 |
| Eco147I | AGGCCT | 1 cut(s) | 23 |
| Eco24I | GRGCYC | 1 cut(s) | 297 |
| Eco47I | GGWCC | 2 cut(s) | 259, 692 |
| Eco53kI | GAGCTC | 1 cut(s) | 295 |
| Eco57I | CTGAAG | 1 cut(s) | 366 |
| Eco81I | CCTNAGG | 1 cut(s) | 272 |
| Eco91I | GGTNACC | 1 cut(s) | 557 |
| EcoICRI | GAGCTC | 1 cut(s) | 295 |
| EcoO109I | RGGNCCY | 1 cut(s) | 259 |
| EcoO65I | GGTNACC | 1 cut(s) | 557 |
| EcoRII | CCWGG | 7 cut(s) | 62, 181, 196, 220, 496, 562, 654 |
| EcoT14I | CCWWGG | 3 cut(s) | 123, 609, 728 |
| EcoT22I | ATGCAT | 1 cut(s) | 50 |
| EcoT38I | GRGCYC | 1 cut(s) | 297 |
| ErhI | CCWWGG | 3 cut(s) | 123, 609, 728 |
| FaeI | CATG | 3 cut(s) | 48, 127, 732 |
| FaiI | YATR | 5 cut(s) | 46, 125, 282, 390, 730 |
| FaqI | GGGAC | 1 cut(s) | 261 |
| FatI | CATG | 3 cut(s) | 44, 123, 728 |
| Fnu4HI | GCNGC | 2 cut(s) | 30, 713 |
| FokI | GGATG | 1 cut(s) | 346 |
| FriOI | GRGCYC | 1 cut(s) | 297 |
| Fsp4HI | GCNGC | 2 cut(s) | 30, 713 |
| FspBI | CTAG | 1 cut(s) | 766 |
| GluI | GCNGC | 2 cut(s) | 30, 713 |
| HaeIII | GGCC | 5 cut(s) | 23, 43, 121, 191, 608 |
| Hin1II | CATG | 3 cut(s) | 48, 127, 732 |
| HphI | GGTGA | 3 cut(s) | 182, 186, 236 |
| Hpy166II | GTNNAC | 2 cut(s) | 354, 508 |
| Hpy188I | TCNGA | 2 cut(s) | 473, 724 |
| Hpy188III | TCNNGA | 6 cut(s) | 298, 436, 466, 490, 602, 748 |
| Hpy8I | GTNNAC | 2 cut(s) | 354, 508 |
| Hpy99I | CGWCG | 1 cut(s) | 467 |
| HpyAV | CCTTC | 2 cut(s) | 160, 610 |
| HpyCH4III | ACNGT | 2 cut(s) | 10, 477 |
| HpyCH4IV | ACGT | 1 cut(s) | 462 |
| HpyCH4V | TGCA | 4 cut(s) | 48, 416, 593, 712 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 29, 401, 647 |
| HpyF3I | CTNAG | 7 cut(s) | 25, 255, 272, 291, 405, 721, 755 |
| HpySE526I | ACGT | 1 cut(s) | 462 |
| Hsp92II | CATG | 3 cut(s) | 48, 127, 732 |
| Kzo9I | GATC | 3 cut(s) | 238, 366, 468 |
| Lsp1109I | GCAGC | 1 cut(s) | 724 |
| LweI | GCATC | 5 cut(s) | 57, 324, 382, 425, 579 |
| MaeI | CTAG | 1 cut(s) | 766 |
| MaeII | ACGT | 1 cut(s) | 462 |
| MaeIII | GTNAC | 4 cut(s) | 10, 224, 557, 679 |
| MalI | GATC | 3 cut(s) | 240, 368, 470 |
| MboI | GATC | 3 cut(s) | 238, 366, 468 |
| MboII | GAAGA | 6 cut(s) | 72, 75, 209, 411, 514, 565 |
| MflI | RGATCY | 1 cut(s) | 366 |
| MhlI | GDGCHC | 1 cut(s) | 297 |
| MluCI | AATT | 2 cut(s) | 92, 621 |
| Mph1103I | ATGCAT | 1 cut(s) | 50 |
| MseI | TTAA | 3 cut(s) | 95, 150, 372 |
| MspA1I | CMGCKG | 1 cut(s) | 29 |
| MspR9I | CCNGG | 7 cut(s) | 64, 183, 198, 222, 498, 564, 656 |
| Mva1269I | GAATGC | 1 cut(s) | 650 |
| MvaI | CCWGG | 7 cut(s) | 64, 183, 198, 222, 498, 564, 656 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 29, 401, 647 |
| NcoI | CCATGG | 2 cut(s) | 123, 728 |
| NdeII | GATC | 3 cut(s) | 238, 366, 468 |
| NlaIII | CATG | 3 cut(s) | 48, 127, 732 |
| NlaIV | GGNNCC | 3 cut(s) | 68, 261, 368 |
| NmuCI | GTSAC | 3 cut(s) | 10, 224, 679 |
| NsiI | ATGCAT | 1 cut(s) | 50 |
| PceI | AGGCCT | 1 cut(s) | 23 |
| PctI | GAATGC | 1 cut(s) | 650 |
| PkrI | GCNGC | 2 cut(s) | 31, 714 |
| PpuMI | RGGWCCY | 1 cut(s) | 259 |
| Psp124BI | GAGCTC | 1 cut(s) | 297 |
| Psp5II | RGGWCCY | 1 cut(s) | 259 |
| Psp6I | CCWGG | 7 cut(s) | 62, 181, 196, 220, 496, 562, 654 |
| PspEI | GGTNACC | 1 cut(s) | 557 |
| PspGI | CCWGG | 7 cut(s) | 62, 181, 196, 220, 496, 562, 654 |
| PspN4I | GGNNCC | 3 cut(s) | 68, 261, 368 |
| PspPI | GGNCC | 3 cut(s) | 120, 259, 692 |
| PspPPI | RGGWCCY | 1 cut(s) | 259 |
| PstNI | CAGNNNCTG | 1 cut(s) | 32 |
| PsuI | RGATCY | 1 cut(s) | 366 |
| RsaI | GTAC | 1 cut(s) | 410 |
| RsaNI | GTAC | 1 cut(s) | 409 |
| SacI | GAGCTC | 1 cut(s) | 297 |
| SaqAI | TTAA | 3 cut(s) | 95, 150, 372 |
| SatI | GCNGC | 2 cut(s) | 30, 713 |
| Sau3AI | GATC | 3 cut(s) | 238, 366, 468 |
| Sau96I | GGNCC | 3 cut(s) | 120, 259, 692 |
| ScaI | AGTACT | 1 cut(s) | 410 |
| ScrFI | CCNGG | 7 cut(s) | 64, 183, 198, 222, 498, 564, 656 |
| SduI | GDGCHC | 1 cut(s) | 297 |
| SfaNI | GCATC | 5 cut(s) | 57, 324, 382, 425, 579 |
| SinI | GGWCC | 2 cut(s) | 259, 692 |
| SmlI | CTYRAG | 1 cut(s) | 602 |
| SmoI | CTYRAG | 1 cut(s) | 602 |
| Sse9I | AATT | 2 cut(s) | 92, 621 |
| SseBI | AGGCCT | 1 cut(s) | 23 |
| SsiI | CCGC | 1 cut(s) | 29 |
| SspMI | CTAG | 1 cut(s) | 766 |
| SstI | GAGCTC | 1 cut(s) | 297 |
| StuI | AGGCCT | 1 cut(s) | 23 |
| StyD4I | CCNGG | 7 cut(s) | 62, 181, 196, 220, 496, 562, 654 |
| StyI | CCWWGG | 3 cut(s) | 123, 609, 728 |
| TaaI | ACNGT | 2 cut(s) | 10, 477 |
| TaiI | ACGT | 1 cut(s) | 465 |
| TaqI | TCGA | 1 cut(s) | 465 |
| TasI | AATT | 2 cut(s) | 92, 621 |
| TatI | WGTACW | 1 cut(s) | 408 |
| TauI | GCSGC | 1 cut(s) | 32 |
| Tru1I | TTAA | 3 cut(s) | 95, 150, 372 |
| Tru9I | TTAA | 3 cut(s) | 95, 150, 372 |
| TscAI | CASTG | 1 cut(s) | 214 |
| TseFI | GTSAC | 3 cut(s) | 10, 224, 679 |
| TseI | GCWGC | 1 cut(s) | 712 |
| Tsp45I | GTSAC | 3 cut(s) | 10, 224, 679 |
| TspDTI | ATGAA | 3 cut(s) | 103, 411, 436 |
| TspRI | CASTG | 1 cut(s) | 214 |
| VpaK11BI | GGWCC | 2 cut(s) | 259, 692 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 634 |
| XspI | CTAG | 1 cut(s) | 766 |
| ZrmI | AGTACT | 1 cut(s) | 410 |
| Zsp2I | ATGCAT | 1 cut(s) | 50 |