Prupe.5G206000_v2.0.a1

Mitochondrial import receptor subunit TOM5 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
16461135 .. 16462700
1566 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G206000.1

Sequence Viewer

Length: 165 bp
ATGGCGGACTTCCCGATCTCACTGGACAAGGCGAAATACTTCTTGCAGTCCCAGTATCATGACGAGGAAAAGTGGGCCCTTAACATGAAATTGCTGCGTGCTGCAGGTCTGTTTGCAGGATCAATTCTTCTAATGCGGAGTTACGGTGATCTGATGGCCATATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

55

Amino Acids

6.18

Weight (kDa)

6.52

Isoelectric Point (pI)

46.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0017111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08040
fragaria_vesca FvH4_5g13750
malus_domestica MD06G1225800.v1.1 MD14G1212700.v1.1
prunus_persica Prupe.5G206000_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0183191
rosa_laevigata RLG00000005068
rosa_roxburghii Rroxscaffold_3G00270670
rosa_rugosa Rorug06G0454700
rosa_samantha Rh7BG056800 Rh7CG057900 Rh7DG056700
rosa_wichuraiana Rw7G004660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 95
AciI CCGC 2 cut(s) 5, 136
AclWI GGATC 1 cut(s) 127
AcoI YGGCCR 1 cut(s) 156
AlwI GGATC 1 cut(s) 127
AoxI GGCC 2 cut(s) 75, 156
ApaI GGGCCC 1 cut(s) 79
ApeKI GCWGC 2 cut(s) 94, 101
Asp700I GAANNNNTTC 1 cut(s) 38
AspS9I GGNCC 2 cut(s) 75, 76
AsuHPI GGTGA 1 cut(s) 158
BaeGI GKGCMC 1 cut(s) 79
BalI TGGCCA 1 cut(s) 158
BanII GRGCYC 1 cut(s) 79
BbvI GCAGC 2 cut(s) 81, 88
BccI CCATC 1 cut(s) 148
BfmI CTRYAG 1 cut(s) 102
BfuAI ACCTGC 1 cut(s) 95
BisI GCNGC 2 cut(s) 95, 102
BlsI GCNGC 2 cut(s) 96, 103
BmgT120I GGNCC 2 cut(s) 75, 76
BmiI GGNNCC 1 cut(s) 77
BmrI ACTGGG 1 cut(s) 46
BmuI ACTGGG 1 cut(s) 46
BsaXI ACNNNNNCTCC 2 cut(s) 130, 160
Bse1I ACTGG 2 cut(s) 27, 52
BseNI ACTGG 2 cut(s) 27, 52
BseSI GKGCMC 1 cut(s) 79
BseXI GCAGC 2 cut(s) 81, 88
BshFI GGCC 2 cut(s) 77, 158
BslFI GGGAC 1 cut(s) 34
BsmFI GGGAC 1 cut(s) 34
BsnI GGCC 2 cut(s) 77, 158
Bsp120I GGGCCC 1 cut(s) 75
Bsp1286I GDGCHC 1 cut(s) 79
Bsp143I GATC 3 cut(s) 15, 119, 148
BspACI CCGC 2 cut(s) 5, 136
BspANI GGCC 2 cut(s) 77, 158
BspHI TCATGA 1 cut(s) 58
BspLI GGNNCC 1 cut(s) 77
BspMAI CTGCAG 1 cut(s) 106
BspMI ACCTGC 1 cut(s) 95
BspPI GGATC 1 cut(s) 127
BsrI ACTGG 2 cut(s) 27, 52
BssMI GATC 3 cut(s) 15, 119, 148
Bst4CI ACNGT 1 cut(s) 146
BstC8I GCNNGC 1 cut(s) 99
BstKTI GATC 3 cut(s) 18, 122, 151
BstMBI GATC 3 cut(s) 15, 119, 148
BstSFI CTRYAG 1 cut(s) 102
BstSLI GKGCMC 1 cut(s) 79
BstV1I GCAGC 2 cut(s) 81, 88
BsuRI GGCC 2 cut(s) 77, 158
BtsIMutI CAGTG 1 cut(s) 20
BveI ACCTGC 1 cut(s) 95
Cac8I GCNNGC 1 cut(s) 99
CciI TCATGA 1 cut(s) 58
Cfr13I GGNCC 2 cut(s) 75, 76
CviAII CATG 2 cut(s) 59, 85
CviJI RGCY 2 cut(s) 77, 158
CviKI_1 RGCY 2 cut(s) 77, 158
DpnI GATC 3 cut(s) 17, 121, 150
DpnII GATC 3 cut(s) 15, 119, 148
EaeI YGGCCR 1 cut(s) 156
EciI GGCGGA 1 cut(s) 20
Eco24I GRGCYC 1 cut(s) 79
EcoO109I RGGNCCY 1 cut(s) 76
EcoT38I GRGCYC 1 cut(s) 79
FaeI CATG 2 cut(s) 62, 88
FaiI YATR 4 cut(s) 60, 86, 161, 163
FaqI GGGAC 1 cut(s) 34
FatI CATG 2 cut(s) 58, 84
FauNDI CATATG 1 cut(s) 161
Fnu4HI GCNGC 2 cut(s) 95, 102
FriOI GRGCYC 1 cut(s) 79
Fsp4HI GCNGC 2 cut(s) 95, 102
GluI GCNGC 2 cut(s) 95, 102
HaeIII GGCC 2 cut(s) 77, 158
Hin1II CATG 2 cut(s) 62, 88
HphI GGTGA 1 cut(s) 158
Hpy188I TCNGA 1 cut(s) 153
Hpy188III TCNNGA 2 cut(s) 13, 59
HpyCH4III ACNGT 1 cut(s) 146
HpyCH4V TGCA 3 cut(s) 46, 104, 116
Hsp92II CATG 2 cut(s) 62, 88
Kzo9I GATC 3 cut(s) 15, 119, 148
LpnPI CCDG 4 cut(s) 8, 65, 90, 102
Lsp1109I GCAGC 2 cut(s) 81, 88
MaeIII GTNAC 1 cut(s) 140
MalI GATC 3 cut(s) 17, 121, 150
MboI GATC 3 cut(s) 15, 119, 148
MboII GAAGA 1 cut(s) 119
MhlI GDGCHC 1 cut(s) 79
MlsI TGGCCA 1 cut(s) 158
MluCI AATT 2 cut(s) 89, 123
MluNI TGGCCA 1 cut(s) 158
MnlI CCTC 1 cut(s) 58
Mox20I TGGCCA 1 cut(s) 158
MroXI GAANNNNTTC 1 cut(s) 38
MscI TGGCCA 1 cut(s) 158
MseI TTAA 1 cut(s) 81
Msp20I TGGCCA 1 cut(s) 158
NdeI CATATG 1 cut(s) 161
NdeII GATC 3 cut(s) 15, 119, 148
NlaIII CATG 2 cut(s) 62, 88
NlaIV GGNNCC 1 cut(s) 77
PagI TCATGA 1 cut(s) 58
PdmI GAANNNNTTC 1 cut(s) 38
PkrI GCNGC 2 cut(s) 96, 103
PspN4I GGNNCC 1 cut(s) 77
PspOMI GGGCCC 1 cut(s) 75
PspPI GGNCC 2 cut(s) 75, 76
PstI CTGCAG 1 cut(s) 106
SaqAI TTAA 1 cut(s) 81
SatI GCNGC 2 cut(s) 95, 102
Sau3AI GATC 3 cut(s) 15, 119, 148
Sau96I GGNCC 2 cut(s) 75, 76
SduI GDGCHC 1 cut(s) 79
SetI ASST 1 cut(s) 109
SfcI CTRYAG 1 cut(s) 102
Sse9I AATT 2 cut(s) 89, 123
SsiI CCGC 2 cut(s) 5, 136
TaaI ACNGT 1 cut(s) 146
TasI AATT 2 cut(s) 89, 123
Tru1I TTAA 1 cut(s) 81
Tru9I TTAA 1 cut(s) 81
TscAI CASTG 1 cut(s) 27
TseI GCWGC 2 cut(s) 94, 101
TspDTI ATGAA 1 cut(s) 101
TspRI CASTG 1 cut(s) 27
XmnI GAANNNNTTC 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.