Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0014507

Physical Location & Seq

Genomic Coordinates Reverse (-)

16842209 .. 16844766

Gene Structure 2558 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G213000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 756 bp

ATGGTCTCCCTTTCGGTCTCGACCCCTAATTTCACCACCCCTTTCGTCGGCCAAAAACTTACTTTTCGTGCAAATACAAAGAAGCTGCAAACATCTTACTCCCCTATACGAACCCCTAGATGTGCTGCCGATACATCTTATGGAGGTAATGTTCCAAAGTTCCCTCGAACCAGCATATGGGATCCCTATAAACGTCTTGGTGTAAGCTATGATGCTTCTGAGGAAGAAATTTGGGGATCACGAAATTTTCTCTTGCAGCAGTATGCTGGACATGAGAGAAGTGAAGAATCAATTGAATCTGCTTTTGAGAAAATCTTGATGGCCAGCTTCACACAGAGGAAGAAAACAAAGATTAATTTGAAGAGCAAGTTAAAAAAGAAAGTTGAAGAGTCTCCACCTTGGGTTAAGAATCTGCTCAATTTTGTGGAAGTTCCACCTATTGAAGTCATTTTCAGAAGATTTTTCCTCTTTGCATTCATGGGTGGCTGGAGTATCATGAACTCAGCTGAAGGTGGACCTGCTTTTCAGGTGGCAGTCTCCTTGGCAGCTTGCATATATTTCCTCAATGAGAAGACAAAGAGCTTGGGCAGAGCTTGCATTTTTGGGCTTGGAGCTCTTGTGACTGGCTGGGTATGTGGTTCGGTTTTGGTACCCAATATTCCGTCAATGCTATTACACCCAACTTGGACTCTGGAGCTTGTAACGTCACTGGTAGTATATGTGTTCCTGTTTCTTGCTTGTACCTTTCTCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006457 GO:0006996 GO:0007275 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009528 GO:0009532 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009639 GO:0009640 GO:0009657 GO:0009658 GO:0009704 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010154 GO:0016020 GO:0016043 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0031976 GO:0031984 GO:0032386 GO:0032388 GO:0032501 GO:0032502 GO:0032879 GO:0032880 GO:0033157 GO:0034357 GO:0034762 GO:0034764 GO:0042170 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044183 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048518 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050896 GO:0051049 GO:0051050 GO:0051222 GO:0051223 GO:0055035 GO:0060341 GO:0061077 GO:0061458 GO:0065007 GO:0070201 GO:0071840 GO:0090087 GO:0090316 GO:1903533 GO:1903827 GO:1903829 GO:1904215 GO:1904216 GO:1904589 GO:1904591 GO:1904951

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CPP1-like

Protein Analysis

252

Amino Acids

28.19

Weight (kDa)

9.51

Isoelectric Point (pI)

45.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23040 AT5G23040
fragaria_vesca	FvH4_5g12961
malus_domestica	MD06G1208500.v1.1 MD14G1218800.v1.1
prunus_persica	Prupe.5G213000_v2.0.a1
pyrus_communis	pycom06g18630
rosa_chinensis	RchiOBHm_Chr7g0184201
rosa_laevigata	RLG00000004994
rosa_multiflora	Rmu_co8396789.1_g000001 Rmu_sc0012221.1_g000008
rosa_rugosa	Rorug06G0463800
rosa_samantha	Rh7AG082000 Rh7BG065200 Rh7CG065600 Rh7DG065300
rosa_wichuraiana	Rw7G005350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	526
Acc65I	GGTACC	1 cut(s)	649
AccB1I	GGYRCC	1 cut(s)	649
AccB7I	CCANNNNNTGG	1 cut(s)	177
AclWI	GGATC	3 cut(s)	176, 189, 244
AcoI	YGGCCR	2 cut(s)	49, 321
AcsI	RAATTY	2 cut(s)	228, 244
AcuI	CTGAAG	1 cut(s)	528
AfaI	GTAC	2 cut(s)	651, 742
AfiI	CCNNNNNNNGG	2 cut(s)	47, 177
AgsI	TTSAA	4 cut(s)	296, 361, 386, 443
AloI	GAACNNNNNNTCC	2 cut(s)	135, 167
AluBI	AGCT	9 cut(s)	85, 207, 327, 506, 548, 582, 593, 614, 697
AluI	AGCT	9 cut(s)	85, 207, 327, 506, 548, 582, 593, 614, 697
Alw21I	GWGCWC	1 cut(s)	616
Alw26I	GTCTC	4 cut(s)	10, 22, 396, 541
AlwI	GGATC	3 cut(s)	176, 189, 244
AoxI	GGCC	2 cut(s)	49, 321
ApeKI	GCWGC	4 cut(s)	85, 125, 256, 545
ApoI	RAATTY	2 cut(s)	228, 244
AseI	ATTAAT	1 cut(s)	354
Asp718I	GGTACC	1 cut(s)	649
AspS9I	GGNCC	1 cut(s)	515
AsuHPI	GGTGA	1 cut(s)	25
AvaII	GGWCC	1 cut(s)	515
BalI	TGGCCA	1 cut(s)	323
BamHI	GGATCC	1 cut(s)	181
BanI	GGYRCC	1 cut(s)	649
BanII	GRGCYC	1 cut(s)	616
BbsI	GAAGAC	1 cut(s)	578
Bbv12I	GWGCWC	1 cut(s)	616
BbvI	GCAGC	4 cut(s)	72, 112, 268, 557
BccI	CCATC	1 cut(s)	313
BcoDI	GTCTC	4 cut(s)	10, 22, 396, 541
BfaI	CTAG	1 cut(s)	117
BfuAI	ACCTGC	1 cut(s)	526
BisI	GCNGC	4 cut(s)	86, 126, 257, 546
BlsI	GCNGC	4 cut(s)	87, 127, 258, 547
Bme18I	GGWCC	1 cut(s)	515
BmgT120I	GGNCC	1 cut(s)	515
BmiI	GGNNCC	2 cut(s)	183, 651
BmsI	GCATC	1 cut(s)	202
BpiI	GAAGAC	1 cut(s)	578
BpmI	CTGGAG	2 cut(s)	508, 713
BpuEI	CTTGAG	1 cut(s)	734
BsaI	GGTCTC	2 cut(s)	10, 22
BsaJI	CCNNGG	2 cut(s)	398, 540
BsaXI	ACNNNNNCTCC	4 cut(s)	135, 165, 603, 633
Bsc4I	CCNNNNNNNGG	2 cut(s)	47, 177
Bse1I	ACTGG	2 cut(s)	628, 714
BseDI	CCNNGG	2 cut(s)	398, 540
BseLI	CCNNNNNNNGG	2 cut(s)	47, 177
BseMII	CTCAG	2 cut(s)	210, 516
BseNI	ACTGG	2 cut(s)	628, 714
BseXI	GCAGC	4 cut(s)	72, 112, 268, 557
BseYI	CCCAGC	1 cut(s)	627
BshFI	GGCC	2 cut(s)	51, 323
BshNI	GGYRCC	1 cut(s)	649
BsiHKAI	GWGCWC	1 cut(s)	616
BslI	CCNNNNNNNGG	2 cut(s)	47, 177
BsmAI	GTCTC	4 cut(s)	10, 22, 396, 541
BsmI	GAATGC	1 cut(s)	473
BsnI	GGCC	2 cut(s)	51, 323
Bso31I	GGTCTC	2 cut(s)	10, 22
Bsp1286I	GDGCHC	1 cut(s)	616
Bsp143I	GATC	2 cut(s)	181, 236
BspANI	GGCC	2 cut(s)	51, 323
BspCNI	CTCAG	2 cut(s)	211, 515
BspHI	TCATGA	1 cut(s)	495
BspLI	GGNNCC	2 cut(s)	183, 651
BspMI	ACCTGC	1 cut(s)	526
BspPI	GGATC	3 cut(s)	176, 189, 244
BspQI	GCTCTTC	1 cut(s)	356
BspT107I	GGYRCC	1 cut(s)	649
BspTNI	GGTCTC	2 cut(s)	10, 22
BsrI	ACTGG	2 cut(s)	628, 714
BssECI	CCNNGG	2 cut(s)	398, 540
BssMI	GATC	2 cut(s)	181, 236
BssT1I	CCWWGG	2 cut(s)	398, 540
Bst6I	CTCTTC	2 cut(s)	356, 381
BstAPI	GCANNNNNTGC	1 cut(s)	594
BstC8I	GCNNGC	3 cut(s)	325, 550, 595
BstDEI	CTNAG	2 cut(s)	219, 502
BstKTI	GATC	2 cut(s)	184, 239
BstMAI	GTCTC	4 cut(s)	10, 22, 396, 541
BstMBI	GATC	2 cut(s)	181, 236
BstMWI	GCNNNNNNNGC	1 cut(s)	594
BstV1I	GCAGC	4 cut(s)	72, 112, 268, 557
BstV2I	GAAGAC	1 cut(s)	578
BstX2I	RGATCY	1 cut(s)	181
BstYI	RGATCY	1 cut(s)	181
BsuRI	GGCC	2 cut(s)	51, 323
BtsIMutI	CAGTG	1 cut(s)	707
BveI	ACCTGC	1 cut(s)	526
Cac8I	GCNNGC	3 cut(s)	325, 550, 595
CciI	TCATGA	1 cut(s)	495
Cfr13I	GGNCC	1 cut(s)	515
Csp6I	GTAC	2 cut(s)	650, 741
CviAII	CATG	3 cut(s)	272, 478, 496
CviQI	GTAC	2 cut(s)	650, 741
DdeI	CTNAG	2 cut(s)	219, 502
DpnI	GATC	2 cut(s)	183, 238
DpnII	GATC	2 cut(s)	181, 236
EaeI	YGGCCR	2 cut(s)	49, 321
Eam1104I	CTCTTC	2 cut(s)	356, 381
EarI	CTCTTC	2 cut(s)	356, 381
Ecl136II	GAGCTC	1 cut(s)	614
Eco130I	CCWWGG	2 cut(s)	398, 540
Eco24I	GRGCYC	1 cut(s)	616
Eco31I	GGTCTC	2 cut(s)	10, 22
Eco47I	GGWCC	1 cut(s)	515
Eco53kI	GAGCTC	1 cut(s)	614
Eco57I	CTGAAG	1 cut(s)	528
EcoICRI	GAGCTC	1 cut(s)	614
EcoT14I	CCWWGG	2 cut(s)	398, 540
EcoT38I	GRGCYC	1 cut(s)	616
ErhI	CCWWGG	2 cut(s)	398, 540
FaeI	CATG	3 cut(s)	275, 481, 499
FatI	CATG	3 cut(s)	271, 477, 495
FauNDI	CATATG	1 cut(s)	176
Fnu4HI	GCNGC	4 cut(s)	86, 126, 257, 546
FriOI	GRGCYC	1 cut(s)	616
Fsp4HI	GCNGC	4 cut(s)	86, 126, 257, 546
FspBI	CTAG	1 cut(s)	117
GluI	GCNGC	4 cut(s)	86, 126, 257, 546
GsaI	CCCAGC	1 cut(s)	631
GsuI	CTGGAG	2 cut(s)	508, 713
HaeIII	GGCC	2 cut(s)	51, 323
Hin1II	CATG	3 cut(s)	275, 481, 499
HinfI	GANTC	5 cut(s)	287, 296, 389, 409, 688
HphI	GGTGA	1 cut(s)	25
Hpy166II	GTNNAC	1 cut(s)	515
Hpy188I	TCNGA	2 cut(s)	220, 455
Hpy188III	TCNNGA	5 cut(s)	19, 240, 316, 496, 692
Hpy8I	GTNNAC	1 cut(s)	515
Hpy99I	CGWCG	1 cut(s)	50
HpyAV	CCTTC	1 cut(s)	503
HpyCH4IV	ACGT	2 cut(s)	193, 704
HpyCH4V	TGCA	6 cut(s)	71, 88, 256, 473, 552, 597
HpyF10VI	GCNNNNNNNGC	1 cut(s)	594
HpyF3I	CTNAG	2 cut(s)	219, 502
HpySE526I	ACGT	2 cut(s)	193, 704
Hsp92II	CATG	3 cut(s)	275, 481, 499
KpnI	GGTACC	1 cut(s)	653
Kzo9I	GATC	2 cut(s)	181, 236
LguI	GCTCTTC	1 cut(s)	356
LmnI	GCTCC	2 cut(s)	611, 694
Lsp1109I	GCAGC	4 cut(s)	72, 112, 268, 557
LweI	GCATC	1 cut(s)	202
MaeI	CTAG	1 cut(s)	117
MaeII	ACGT	2 cut(s)	193, 704
MaeIII	GTNAC	3 cut(s)	619, 700, 705
MalI	GATC	2 cut(s)	183, 238
MboI	GATC	2 cut(s)	181, 236
MboII	GAAGA	7 cut(s)	236, 296, 352, 373, 398, 468, 583
MfeI	CAATTG	1 cut(s)	291
MflI	RGATCY	1 cut(s)	181
MhlI	GDGCHC	1 cut(s)	616
MlsI	TGGCCA	1 cut(s)	323
MluCI	AATT	6 cut(s)	28, 228, 244, 291, 355, 418
MluNI	TGGCCA	1 cut(s)	323
MlyI	GAGTC	2 cut(s)	398, 682
MnlI	CCTC	6 cut(s)	137, 174, 214, 330, 476, 572
Mox20I	TGGCCA	1 cut(s)	323
MscI	TGGCCA	1 cut(s)	323
MseI	TTAA	3 cut(s)	354, 371, 405
Msp20I	TGGCCA	1 cut(s)	323
MspA1I	CMGCKG	1 cut(s)	506
MunI	CAATTG	1 cut(s)	291
Mva1269I	GAATGC	1 cut(s)	473
MwoI	GCNNNNNNNGC	1 cut(s)	594
NdeI	CATATG	1 cut(s)	176
NdeII	GATC	2 cut(s)	181, 236
NlaIII	CATG	3 cut(s)	275, 481, 499
NlaIV	GGNNCC	2 cut(s)	183, 651
NmuCI	GTSAC	2 cut(s)	619, 705
PagI	TCATGA	1 cut(s)	495
PciSI	GCTCTTC	1 cut(s)	356
PctI	GAATGC	1 cut(s)	473
PfeI	GAWTC	3 cut(s)	287, 296, 409
PflMI	CCANNNNNTGG	1 cut(s)	177
PkrI	GCNGC	4 cut(s)	87, 127, 258, 547
PleI	GAGTC	2 cut(s)	397, 682
PpsI	GAGTC	2 cut(s)	397, 682
PshBI	ATTAAT	1 cut(s)	354
Psp124BI	GAGCTC	1 cut(s)	616
PspFI	CCCAGC	1 cut(s)	627
PspN4I	GGNNCC	2 cut(s)	183, 651
PspPI	GGNCC	1 cut(s)	515
PsuI	RGATCY	1 cut(s)	181
PvuII	CAGCTG	1 cut(s)	506
RsaI	GTAC	2 cut(s)	651, 742
RsaNI	GTAC	2 cut(s)	650, 741
SacI	GAGCTC	1 cut(s)	616
SapI	GCTCTTC	1 cut(s)	356
SaqAI	TTAA	3 cut(s)	354, 371, 405
SatI	GCNGC	4 cut(s)	86, 126, 257, 546
Sau3AI	GATC	2 cut(s)	181, 236
Sau96I	GGNCC	1 cut(s)	515
SchI	GAGTC	2 cut(s)	398, 682
SduI	GDGCHC	1 cut(s)	616
SfaNI	GCATC	1 cut(s)	202
SinI	GGWCC	1 cut(s)	515
SmlI	CTYRAG	1 cut(s)	749
SmoI	CTYRAG	1 cut(s)	749
Sse9I	AATT	6 cut(s)	28, 228, 244, 291, 355, 418
SspI	AATATT	1 cut(s)	658
SspMI	CTAG	1 cut(s)	117
SstI	GAGCTC	1 cut(s)	616
StyI	CCWWGG	2 cut(s)	398, 540
TaiI	ACGT	2 cut(s)	196, 707
TaqI	TCGA	2 cut(s)	20, 166
TaqII	GACCGA	1 cut(s)	4
TasI	AATT	6 cut(s)	28, 228, 244, 291, 355, 418
TfiI	GAWTC	3 cut(s)	287, 296, 409
Tru1I	TTAA	3 cut(s)	354, 371, 405
Tru9I	TTAA	3 cut(s)	354, 371, 405
TscAI	CASTG	1 cut(s)	714
TseFI	GTSAC	2 cut(s)	619, 705
TseI	GCWGC	4 cut(s)	85, 125, 256, 545
Tsp45I	GTSAC	2 cut(s)	619, 705
TspDTI	ATGAA	2 cut(s)	466, 512
TspGWI	ACGGA	1 cut(s)	651
TspRI	CASTG	1 cut(s)	714
Van91I	CCANNNNNTGG	1 cut(s)	177
VpaK11BI	GGWCC	1 cut(s)	515
VspI	ATTAAT	1 cut(s)	354
XapI	RAATTY	2 cut(s)	228, 244
XspI	CTAG	1 cut(s)	117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.