Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0016034

Physical Location & Seq

Genomic Coordinates Reverse (-)

16955896 .. 16957306

Gene Structure 1411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G215800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 990 bp

ATGTTACAAAGCCCAAAATTCTTGCAATCCTCCGCTCCTCCTCCAACACCACCATCACCCATTCCACAACTCCAAGTTGTACCCACTCGCTTATCCTTCCCTTCCATCAAACAATGCTGCAAATTCTCACGTAGAGAGCTCACAATTGGAAGCAATTCTCTTATACTTGCCCTTCTGGCCTCGCAGAGTTTAGAGGCTTTGTTACCGTCCAAAGCACAAGCCGAGAACCTTATAGACGACGACACAAACAGAACTGAACAAGAAGCACAAACTTCAAATGCTACTGCTGCTACATGCACTGACAGAAGCCCAACAAAGCGTGCATTTCTCGATATATCCATTGATGGAGAGCCTGTTGGTCGCATAATAATTGGGCTACACGAAGACGATGCCCCTGTTGGAGCTGCGAGATTTGGCAGTCTTGTGAGTGGAGCTGCTGGGACTAGCTACAGAAGGAAAGAGTTTGTTAAGATTATGCCCAACTACGTTCAACATGGAGGCGTGAGATCTTTTGGTGTAGATGCTGAGCTCGCAAAGAAGACAGGAACCAATTTGGAAGTTGACAATCTGACGGATGAGTGGGAGAGACTGAATGAAAAGTGTGCAGGGATCAAGAACAAGGCTGGAACTGTGGGCATTGTTGTGAGAGATCCTTCGAGACCACCCCCCAAGATGAAGTTGGTTGCCCGAAAAGGGAAGTTGGAGATTGATCAAGAGGAGGTTGGCACGGCCCCGAATGGAACAGAGTTTGTGATCACCACCAAGGATTCGCCTGAGCTTGATGCTTCAACATTGGTGGTTGGAACAGTCCTGGAAGGTAAGGAGGTGGTGGAGAAGATTGGTGAGGTGAAGACAGTCCAAGAGAATACCAGTTCACCTTATTTCAGGGTGGCCAAGCTGATAGGAGATAAGAGAGCTGTTGTGGCCGAAAGAGGATTCAACCGCCCTTACACAAAGGTGGTTATCACAAACTGTGGCTTGATGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005911 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0012505 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0022622 GO:0030054 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0055044 GO:0071704 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase

Protein Analysis

330

Amino Acids

35.58

Weight (kDa)

8.49

Isoelectric Point (pI)

45.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016034)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74070 AT1G74070
fragaria_vesca	FvH4_5g12840
malus_domestica	MD14G1220500.v1.1
prunus_persica	Prupe.5G215800_v2.0.a1 Prupe.5G215800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0184401
rosa_laevigata	RLG00000004979
rosa_multiflora	Rmu_sc0001557.1_g000019
rosa_roxburghii	Rroxscaffold_3G00269660
rosa_samantha	Rh7AG080300 Rh7BG066900 Rh7CG067200 Rh7DG066900
rosa_wichuraiana	Rw7G005500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	35
AciI	CCGC	2 cut(s)	33, 943
AclWI	GGATC	2 cut(s)	617, 644
AcoI	YGGCCR	2 cut(s)	891, 924
AcsI	RAATTY	2 cut(s)	17, 122
AfaI	GTAC	1 cut(s)	81
AfiI	CCNNNNNNNGG	1 cut(s)	693
AgsI	TTSAA	4 cut(s)	276, 491, 789, 940
AjnI	CCWGG	1 cut(s)	810
AleI	CACNNNNGTG	1 cut(s)	956
AluBI	AGCT	8 cut(s)	139, 404, 434, 447, 529, 778, 898, 917
AluI	AGCT	8 cut(s)	139, 404, 434, 447, 529, 778, 898, 917
Alw21I	GWGCWC	2 cut(s)	141, 531
Alw26I	GTCTC	2 cut(s)	580, 652
AlwI	GGATC	2 cut(s)	617, 644
AoxI	GGCC	4 cut(s)	177, 729, 891, 924
ApeKI	GCWGC	4 cut(s)	117, 287, 404, 434
ApoI	RAATTY	2 cut(s)	17, 122
Asp700I	GAANNNNTTC	1 cut(s)	154
AspS9I	GGNCC	1 cut(s)	730
AsuHPI	GGTGA	5 cut(s)	48, 748, 854, 859, 867
BalI	TGGCCA	1 cut(s)	893
BanII	GRGCYC	2 cut(s)	141, 531
BbsI	GAAGAC	3 cut(s)	390, 545, 857
Bbv12I	GWGCWC	2 cut(s)	141, 531
BbvI	GCAGC	4 cut(s)	104, 274, 391, 421
BccI	CCATC	3 cut(s)	61, 113, 338
BceAI	ACGGC	1 cut(s)	744
BcgI	CGANNNNNNTGC	2 cut(s)	371, 405
BciT130I	CCWGG	1 cut(s)	812
BclI	TGATCA	2 cut(s)	709, 753
BcoDI	GTCTC	2 cut(s)	580, 652
BfaI	CTAG	1 cut(s)	444
BfmI	CTRYAG	1 cut(s)	448
BglI	GCCNNNNNGGC	1 cut(s)	176
BglII	AGATCT	1 cut(s)	506
BisI	GCNGC	4 cut(s)	118, 288, 405, 435
BlpI	GCTNAGC	1 cut(s)	525
BlsI	GCNGC	4 cut(s)	119, 289, 406, 436
Bme1390I	CCNGG	1 cut(s)	812
BmgT120I	GGNCC	1 cut(s)	730
BmiI	GGNNCC	2 cut(s)	547, 732
BmrFI	CCNGG	1 cut(s)	812
BmsI	GCATC	3 cut(s)	379, 511, 772
BpiI	GAAGAC	3 cut(s)	390, 545, 857
Bpu10I	CCTNAGC	1 cut(s)	774
Bpu1102I	GCTNAGC	1 cut(s)	525
BsaAI	YACGTR	1 cut(s)	131
BsaI	GGTCTC	1 cut(s)	652
BsaJI	CCNNGG	1 cut(s)	762
BsaXI	ACNNNNNCTCC	2 cut(s)	339, 369
Bsc4I	CCNNNNNNNGG	1 cut(s)	693
Bse1I	ACTGG	1 cut(s)	870
BseBI	CCWGG	1 cut(s)	812
BseDI	CCNNGG	1 cut(s)	762
BseGI	GGATG	1 cut(s)	580
BseLI	CCNNNNNNNGG	1 cut(s)	693
BseMII	CTCAG	2 cut(s)	516, 765
BseNI	ACTGG	1 cut(s)	870
BseRI	GAGGAG	3 cut(s)	27, 30, 731
BseXI	GCAGC	4 cut(s)	104, 274, 391, 421
BseYI	CCCAGC	1 cut(s)	437
BsgI	GTGCAG	1 cut(s)	624
BshFI	GGCC	4 cut(s)	179, 731, 893, 926
BsiHKAI	GWGCWC	2 cut(s)	141, 531
BslFI	GGGAC	1 cut(s)	454
BslI	CCNNNNNNNGG	1 cut(s)	693
BsmAI	GTCTC	2 cut(s)	580, 652
BsmFI	GGGAC	1 cut(s)	454
BsnI	GGCC	4 cut(s)	179, 731, 893, 926
Bso31I	GGTCTC	1 cut(s)	652
Bsp1286I	GDGCHC	2 cut(s)	141, 531
Bsp143I	GATC	5 cut(s)	506, 609, 649, 709, 753
Bsp1720I	GCTNAGC	1 cut(s)	525
BspACI	CCGC	2 cut(s)	33, 943
BspANI	GGCC	4 cut(s)	179, 731, 893, 926
BspCNI	CTCAG	2 cut(s)	517, 766
BspLI	GGNNCC	2 cut(s)	547, 732
BspPI	GGATC	2 cut(s)	617, 644
BspTNI	GGTCTC	1 cut(s)	652
BsrBI	CCGCTC	1 cut(s)	35
BsrI	ACTGG	1 cut(s)	870
BssECI	CCNNGG	1 cut(s)	762
BssMI	GATC	5 cut(s)	506, 609, 649, 709, 753
BssT1I	CCWWGG	1 cut(s)	762
Bst2UI	CCWGG	1 cut(s)	812
Bst4CI	ACNGT	5 cut(s)	207, 631, 808, 856, 974
BstBAI	YACGTR	1 cut(s)	131
BstC8I	GCNNGC	2 cut(s)	321, 531
BstDEI	CTNAG	2 cut(s)	525, 774
BstF5I	GGATG	1 cut(s)	580
BstKTI	GATC	5 cut(s)	509, 612, 652, 712, 756
BstMAI	GTCTC	2 cut(s)	580, 652
BstMBI	GATC	5 cut(s)	506, 609, 649, 709, 753
BstMWI	GCNNNNNNNGC	4 cut(s)	176, 287, 530, 923
BstNI	CCWGG	1 cut(s)	812
BstNSI	RCATGY	1 cut(s)	297
BstSCI	CCNGG	1 cut(s)	810
BstSFI	CTRYAG	1 cut(s)	448
BstV1I	GCAGC	4 cut(s)	104, 274, 391, 421
BstV2I	GAAGAC	3 cut(s)	390, 545, 857
BstX2I	RGATCY	2 cut(s)	506, 649
BstYI	RGATCY	2 cut(s)	506, 649
BsuRI	GGCC	4 cut(s)	179, 731, 893, 926
BtsCI	GGATG	1 cut(s)	580
BtsIMutI	CAGTG	1 cut(s)	297
Cac8I	GCNNGC	2 cut(s)	321, 531
Cfr13I	GGNCC	1 cut(s)	730
Csp6I	GTAC	1 cut(s)	80
CspCI	CAANNNNNGTGG	2 cut(s)	777, 812
CviAII	CATG	2 cut(s)	294, 494
CviQI	GTAC	1 cut(s)	80
DdeI	CTNAG	2 cut(s)	525, 774
DpnI	GATC	5 cut(s)	508, 611, 651, 711, 755
DpnII	GATC	5 cut(s)	506, 609, 649, 709, 753
EaeI	YGGCCR	2 cut(s)	891, 924
Ecl136II	GAGCTC	2 cut(s)	139, 529
Eco130I	CCWWGG	1 cut(s)	762
Eco24I	GRGCYC	2 cut(s)	141, 531
Eco31I	GGTCTC	1 cut(s)	652
Eco53kI	GAGCTC	2 cut(s)	139, 529
EcoICRI	GAGCTC	2 cut(s)	139, 529
EcoRII	CCWGG	1 cut(s)	810
EcoT14I	CCWWGG	1 cut(s)	762
EcoT38I	GRGCYC	2 cut(s)	141, 531
ErhI	CCWWGG	1 cut(s)	762
FaeI	CATG	2 cut(s)	297, 497
FaiI	YATR	7 cut(s)	164, 233, 295, 335, 365, 476, 495
FaqI	GGGAC	1 cut(s)	454
FatI	CATG	2 cut(s)	293, 493
FbaI	TGATCA	2 cut(s)	709, 753
Fnu4HI	GCNGC	4 cut(s)	118, 288, 405, 435
FokI	GGATG	1 cut(s)	587
FriOI	GRGCYC	2 cut(s)	141, 531
Fsp4HI	GCNGC	4 cut(s)	118, 288, 405, 435
FspBI	CTAG	1 cut(s)	444
GluI	GCNGC	4 cut(s)	118, 288, 405, 435
GsaI	CCCAGC	1 cut(s)	441
HaeIII	GGCC	4 cut(s)	179, 731, 893, 926
Hin1II	CATG	2 cut(s)	297, 497
HincII	GTYRAC	1 cut(s)	562
HindII	GTYRAC	1 cut(s)	562
HinfI	GANTC	2 cut(s)	767, 936
HphI	GGTGA	5 cut(s)	48, 748, 854, 859, 867
Hpy166II	GTNNAC	2 cut(s)	562, 875
Hpy188I	TCNGA	1 cut(s)	570
Hpy188III	TCNNGA	4 cut(s)	329, 613, 657, 713
Hpy8I	GTNNAC	2 cut(s)	562, 875
Hpy99I	CGWCG	1 cut(s)	242
HpyAV	CCTTC	6 cut(s)	106, 111, 182, 447, 663, 809
HpyCH4III	ACNGT	5 cut(s)	207, 631, 808, 856, 974
HpyCH4IV	ACGT	2 cut(s)	130, 486
HpyCH4V	TGCA	5 cut(s)	25, 120, 297, 323, 605
HpyF10VI	GCNNNNNNNGC	4 cut(s)	176, 287, 530, 923
HpyF3I	CTNAG	2 cut(s)	525, 774
HpySE526I	ACGT	2 cut(s)	130, 486
Hsp92II	CATG	2 cut(s)	297, 497
Ksp22I	TGATCA	2 cut(s)	709, 753
Kzo9I	GATC	5 cut(s)	506, 609, 649, 709, 753
LmnI	GCTCC	3 cut(s)	40, 401, 431
Lsp1109I	GCAGC	4 cut(s)	104, 274, 391, 421
LweI	GCATC	3 cut(s)	379, 511, 772
MaeI	CTAG	1 cut(s)	444
MaeII	ACGT	2 cut(s)	130, 486
MaeIII	GTNAC	2 cut(s)	3, 201
MalI	GATC	5 cut(s)	508, 611, 651, 711, 755
MbiI	CCGCTC	1 cut(s)	35
MboI	GATC	5 cut(s)	506, 609, 649, 709, 753
MboII	GAAGA	4 cut(s)	395, 550, 847, 862
MfeI	CAATTG	1 cut(s)	144
MflI	RGATCY	2 cut(s)	506, 649
MhlI	GDGCHC	2 cut(s)	141, 531
MlsI	TGGCCA	1 cut(s)	893
MluCI	AATT	6 cut(s)	17, 122, 144, 154, 369, 550
MluNI	TGGCCA	1 cut(s)	893
MmeI	TCCRAC	4 cut(s)	68, 379, 681, 781
Mox20I	TGGCCA	1 cut(s)	893
MroXI	GAANNNNTTC	1 cut(s)	154
MscI	TGGCCA	1 cut(s)	893
MseI	TTAA	1 cut(s)	468
MslI	CAYNNNNRTG	2 cut(s)	641, 956
Msp20I	TGGCCA	1 cut(s)	893
MspR9I	CCNGG	1 cut(s)	812
MunI	CAATTG	1 cut(s)	144
MvaI	CCWGG	1 cut(s)	812
MwoI	GCNNNNNNNGC	4 cut(s)	176, 287, 530, 923
NdeII	GATC	5 cut(s)	506, 609, 649, 709, 753
NlaIII	CATG	2 cut(s)	297, 497
NlaIV	GGNNCC	2 cut(s)	547, 732
NmeAIII	GCCGAG	1 cut(s)	247
NspI	RCATGY	1 cut(s)	297
OliI	CACNNNNGTG	1 cut(s)	956
PdmI	GAANNNNTTC	1 cut(s)	154
PfeI	GAWTC	2 cut(s)	767, 936
PfoI	TCCNGGA	1 cut(s)	810
PkrI	GCNGC	4 cut(s)	119, 289, 406, 436
Ppu21I	YACGTR	1 cut(s)	131
Psp124BI	GAGCTC	2 cut(s)	141, 531
Psp6I	CCWGG	1 cut(s)	810
PspFI	CCCAGC	1 cut(s)	437
PspGI	CCWGG	1 cut(s)	810
PspN4I	GGNNCC	2 cut(s)	547, 732
PspPI	GGNCC	1 cut(s)	730
PsuI	RGATCY	2 cut(s)	506, 649
RsaI	GTAC	1 cut(s)	81
RsaNI	GTAC	1 cut(s)	80
RseI	CAYNNNNRTG	2 cut(s)	641, 956
SacI	GAGCTC	2 cut(s)	141, 531
SaqAI	TTAA	1 cut(s)	468
SatI	GCNGC	4 cut(s)	118, 288, 405, 435
Sau3AI	GATC	5 cut(s)	506, 609, 649, 709, 753
Sau96I	GGNCC	1 cut(s)	730
ScrFI	CCNGG	1 cut(s)	812
SduI	GDGCHC	2 cut(s)	141, 531
SfaNI	GCATC	3 cut(s)	379, 511, 772
SfcI	CTRYAG	1 cut(s)	448
SmiMI	CAYNNNNRTG	2 cut(s)	641, 956
Sse9I	AATT	6 cut(s)	17, 122, 144, 154, 369, 550
SsiI	CCGC	2 cut(s)	33, 943
SspMI	CTAG	1 cut(s)	444
SstI	GAGCTC	2 cut(s)	141, 531
StyD4I	CCNGG	1 cut(s)	810
StyI	CCWWGG	1 cut(s)	762
TaaI	ACNGT	5 cut(s)	207, 631, 808, 856, 974
TaiI	ACGT	2 cut(s)	133, 489
TaqI	TCGA	2 cut(s)	330, 656
TasI	AATT	6 cut(s)	17, 122, 144, 154, 369, 550
TfiI	GAWTC	2 cut(s)	767, 936
Tru1I	TTAA	1 cut(s)	468
Tru9I	TTAA	1 cut(s)	468
TscAI	CASTG	1 cut(s)	304
TseI	GCWGC	4 cut(s)	117, 287, 404, 434
TspDTI	ATGAA	2 cut(s)	609, 689
TspGWI	ACGGA	1 cut(s)	587
TspRI	CASTG	1 cut(s)	304
XapI	RAATTY	2 cut(s)	17, 122
XceI	RCATGY	1 cut(s)	297
XcmI	CCANNNNNNNNNTGG	1 cut(s)	676
XmnI	GAANNNNTTC	1 cut(s)	154
XspI	CTAG	1 cut(s)	444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.