Prupe.5G219600_v2.0.a1

DENN domain and WD repeat-containing protein SCD1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
17129518 .. 17140867
11350 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G219600.1

Sequence Viewer

Length: 3627 bp
ATGGCTCGGATCTTCGAGCACTTAGTGGTGTGCGGGATCGGACCTGAGATTCGGACCCTGGACGGTAGCAAAGGCTTCCACGGGTTTGGCACTTATTACATGCCGTCTCTTCTGGACCAGTACCCTCCTCCAAACCACACTCTCTACCCTCCTCCACCTCCTCAGCTCCCAACCTGTGTGTTGCCAGCTGGTGTTTTGTTCTATTCATCAGGCTATGATTCCAATGACGCCTCCACGATTCCACGGAGCTACCCCATTGTTCTCACTGAGGGTGATGGGACAAAAATTTATGTTAGTTGCATTGCTTTCCGAGATCCAGTCAGTGAGGATATTGCTGAAGCTTATTGTATACCTGCAAATTCATTTGCTGATAAATGTATCTGTCTAGTTTCGCGGTCGCCTAGCTTTCGTTTACTTAGGAATACACTAGAGGAATTATTTACACTTTGTTTTTCCCCTGGTGGAAGTAGCAAACCCTTATGGGATGTTATTGCATCTTTGGTGTCCACTGTACCTTTGCCCACTCCAGGAAAAGATCGAGTTTTGTTTGCTATTGACAATTGTCTGCTTTCTGTGGAGGCTCCACCAAAGGATGGGCTCCCCCATGTTGATATATCATTTCAGCCATTGGTACAGTGCCTAGATGTTGACAACTTAATTAAATTTTTCACAGCCGTGTTGCTTGAGAGGAGAATTTTGCTCCGATCAAACAAATATTCAATTTTAACCCTTGTATCAGAAGCCATATGCCATTTACTTTATCCTTTTCGGTGGCAGCAAGTCTACATTCCGCTACTCTTTTTCAGTGGCGTAGACTATATTGATGCACCTACGCCATATATGATGGGACTTCATTCAGGCGTTGATACATCTAATCTGGCCATGGATGGTGTAGTTGTTGTTGACCTTGAGTGTAATCGTATCACAACAACGGAAGATATACCTCCTATCCCAGAGCCAGAATTAGGAGATTTGCGTGGGGAGATAACAAAGTTATTGCATCCCAATGTTGTGGGGATAGATCAGATGAAGGATGGTTTATATAGTTTGCCTGAGCAATATCCTAAAGGTGGCAACAAACCTTGGGGAGAGGATCACGACCTTCAACTTAGGTTAGTGTTCTTAAAGTTCTTTGCATCACTTTTAAGTGGCTACCGAAACTTCATAGAAGTTACTGCTACTCATGTCTTCAACACTCAAGCATTCTTGACGATGCGGTCCCGGTCAACTGGCCAACCACCAGAACCCATGTTAACACAGTTCCTGGATTCCCATGGTTTCATGGATTATCTGGAAAGAGGATTAGGTTCTGAAGAAAACACTAATAACCTACTTGACAAGTTACAAGATGCAATTAGAAGAAGCCAAAATCCTATTTCAATTCTTCCATCAAATTTGGTAGAGCCTGAGATTATAACAATTGCAGATACGGATGTGGGAGCATCAGGATCAGGTGCCAAATACACATATGATAGGTTTCCCTCAAACATTAGGACAGAAGAGCAAGAAGAAAAGAGGAGGCAGATCCTTGCTGCAGCAAGTGGATTATCCTCTAGCTCACCTTCTGTCCTAGTGGGTAAAGACTCCAAATCAGAAACTCTAACTCCATTGGAGAGGGCTGCGGAAAGGGAGTGCATGGTTTTGGACATAAAAGTTAAGTTGCAGGGTCTGTGGCTTCGTCTTCTGAAATTGGGACCCACTGATGATCCTCTTTCGTCATTTGAATATGGCACAATCCTTGCTTTAATTGAATCTGATGCAGAGGGGATTGGTGGCAGTGGGTTCATTGAATGTATAAGGGAGCACATAAATCAGGGATGGCACTGTCAGTTGACTGAAGAACAATTTCTTGCTGTGAAGGAATTGCTTAAAACAGCTATCAGTCGTGCAACTTCCCGAAATGATTTGTTGACCATCAGGGATGCCCTTGAAGTATCTGCTGAAATGTATAAGAAGGATGCAAATAATGTTGCTGACTACATTCAGCGCCATCTTATATCTTTGTCCATCTGGGAGGAATTACGCTTTTGGGAAGGGTACTTTGACTATCTAATGGAGAGGTCTGCAAACAAGTCGGCCAACTATGCTTCTCTGGTGACTGCACAGCTAAAATTTGTGGAATCACACATGGCTGGATTGGGCCTTCCTGATACTGATGCTTGGTACACGATTGAAACAATAGGAGAGAAGAACAACATTGGATACACACAATTTATACAGCTGAGAGGGTTCTTGTCGCATGTTGTGCAACTACGCATTGGTTATTGGGGAATCACTGCTGTCAAGCCTCAATCCATGTTGTCTCATGGATTAGCATCTCCACATTCAAAAGATAACACAGTTGAGGATCAGCAGCCTGCTGAGGCTTCTGGTGTTGGAAGGAGCTGGGTTCAGAGCATGTTTAGCAGGGATACTGCATCCAGATCCACCTCTTTCAGTCGTGTTCGTAAGTGGACCTCTGATGGTGGCTCTTCAGCTACAAATGAAAATGGGACTCCTCGTAAACGAGATTTATCAGCTGCTGGGCAGAAGAAAACTCAAACCAATGTGCGTGTACTTAGAGGTCATAGTGGCTCGGTTACTGCTTTACATTGTGTAACGAGGAGAGAGGTTTGGGATCTTGTGGGTGACCGCGAAGATGCTGGTTTCTTCATCAGTGGAAGCACAGACTGCACGGTTAAGATCTGGGATCCTAGCTTTCGTGGTAATGAACTTCGGGCAACCTTGAAGGGACACACAAGAGCTGTCCGTGCAATAAGTTCTGATCGAGGAAAGGTAGTATCTGGATCAGATGATCATTCTGTTTTAGTATGGGATAAGCAAACTACTCAGCTTCTAGAAGAGTTGAAAGGCCATGATGCACCGGTTAGCTGTGCGCGCATGCTGTCTGGTGAGCGTGTCCTAACTGCTGCTCATGATGGAACTGTAAAGATGTGGGATGTTAGAACTGACACTTGTGTGGCAACTGTTGGTCGTTGCTCTAGTGCCGTTCTATGCATGGAATATGATGACTCCACAGGAATTTTAGCTGCTGCTGGTCGAGATGCCATTGCAAACACCTGGGACATTCGTGCGGGAAAGGCAATGCACAAGCTTGTAGGGCACACAAAATGGATTCGGTCGATTAGAATGGTGGGGGACACAGTTGTTACTGGTAGTGATGATTGGACCGCAAGAATGTGGTCTGTTTCCCGAGGAACATGTGATGCTGTTCTAGCATGCCATGCTGGCCCAATATTAAGTGTTGAATATTCCACACTTGACAAAGGAATAATTACAGGTTCAACTGATGGGCTACTCCGCTTTTGGGAAAATGTGGAGGGAGGTATAAGATGTGTGAAAAATGTTACTGTTCATACCGCTGCTATATTGTCAATCAACGCTGCAGAACACTGGTTAGGAATTGGAGCTGCTGATAATTCAATGTCTCTTTTCCATCGGCCTCAAGAGAGACTTGGTAGCTTCTCTAGCACAGGAACAAAAATGGCGGGGTGGCAACTATACCGAACACCACAAAGAACAGTTGCTGTGGTACGATGTATTGCTACGGACCTTGAGAGGAAAAGGATATGCAGCGGCGGTCGTAATGGACTTCTTAGGCTTTGGGAAGCCACCATAAACATTTAA

Protein Analysis

1209

Amino Acids

133.49

Weight (kDa)

5.9

Isoelectric Point (pI)

42.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1415
AasI GACNNNNNNGTC 1 cut(s) 1216
Acc36I ACCTGC 1 cut(s) 361
AccB1I GGYRCC 1 cut(s) 1454
AccB7I CCANNNNNTGG 1 cut(s) 593
AccI GTMKAC 3 cut(s) 349, 783, 813
AccII CGCG 3 cut(s) 394, 2634, 2878
AcoI YGGCCR 3 cut(s) 879, 1231, 2076
AcsI RAATTY 7 cut(s) 285, 358, 662, 693, 1393, 2111, 3021
AcuI CTGAAG 4 cut(s) 357, 1332, 1857, 2457
AcyI GRCGYC 1 cut(s) 228
AdeI CACNNNGTG 1 cut(s) 25
AfaI GTAC 7 cut(s) 122, 513, 633, 2039, 2165, 2556, 3534
AfiI CCNNNNNNNGG 5 cut(s) 527, 593, 965, 1070, 3307
AflIII ACRYGT 1 cut(s) 3200
AgeI ACCGGT 1 cut(s) 2863
AjnI CCWGG 5 cut(s) 57, 457, 526, 1263, 3059
AleI CACNNNNGTG 2 cut(s) 674, 2957
Alw21I GWGCWC 2 cut(s) 21, 1806
Alw26I GTCTC 4 cut(s) 111, 2307, 3432, 3445
AlwNI CAGNNNCTG 4 cut(s) 1264, 1669, 2522, 3527
Ama87I CYCGRG 1 cut(s) 3192
AoxI GGCC 7 cut(s) 879, 1231, 2076, 2140, 2851, 3229, 3440
ApoI RAATTY 7 cut(s) 285, 358, 662, 693, 1393, 2111, 3021
ArsI GACNNNNNNTTYG 2 cut(s) 33, 65
AsiGI ACCGGT 1 cut(s) 2863
Asp700I GAANNNNTTC 1 cut(s) 1845
AspLEI GCGC 3 cut(s) 1989, 2878, 2880
AsuC2I CCSGG 1 cut(s) 1222
AsuHPI GGTGA 5 cut(s) 284, 1551, 2107, 2639, 2903
AvaI CYCGRG 1 cut(s) 3192
AvaII GGWCC 8 cut(s) 41, 54, 115, 1218, 1694, 2454, 3168, 3550
BaeGI GKGCMC 1 cut(s) 3105
BaeI ACNNNNGTAYC 4 cut(s) 717, 750, 1419, 1452
BalI TGGCCA 2 cut(s) 881, 1233
BamHI GGATCC 1 cut(s) 2689
BanI GGYRCC 1 cut(s) 1454
BanII GRGCYC 1 cut(s) 600
BbsI GAAGAC 2 cut(s) 1180, 1673
Bbv12I GWGCWC 2 cut(s) 21, 1806
BbvCI CCTCAGC 2 cut(s) 162, 2361
BceAI ACGGC 3 cut(s) 88, 659, 2972
BcgI CGANNNNNNTGC 2 cut(s) 2055, 2089
BciT130I CCWGG 5 cut(s) 59, 459, 528, 1265, 3061
BciVI GTATCC 2 cut(s) 2195, 2404
BclI TGATCA 1 cut(s) 2794
BcnI CCSGG 1 cut(s) 1222
BcoDI GTCTC 4 cut(s) 111, 2307, 3432, 3445
BfmI CTRYAG 2 cut(s) 1533, 3384
BfoI RGCGCY 1 cut(s) 1990
BfuAI ACCTGC 1 cut(s) 361
BfuI GTATCC 2 cut(s) 2195, 2404
BglI GCCNNNNNGGC 1 cut(s) 3228
BglII AGATCT 1 cut(s) 2682
Bme1390I CCNGG 6 cut(s) 59, 459, 528, 1222, 1265, 3061
Bme18I GGWCC 8 cut(s) 41, 54, 115, 1218, 1694, 2454, 3168, 3550
BmeT110I CYCGRG 1 cut(s) 3192
BmiI GGNNCC 8 cut(s) 56, 582, 599, 1220, 1456, 1695, 1696, 2691
BmrFI CCNGG 6 cut(s) 59, 459, 528, 1222, 1265, 3061
BoxI GACNNNNGTC 1 cut(s) 561
BpiI GAAGAC 2 cut(s) 1180, 1673
BpmI CTGGAG 1 cut(s) 510
Bpu10I CCTNAGC 3 cut(s) 162, 1053, 2361
BpuEI CTTGAG 5 cut(s) 704, 929, 1182, 3429, 3575
BpuMI CCSGG 1 cut(s) 1222
BsaBI GATNNNNATC 1 cut(s) 2314
BsaHI GRCGYC 1 cut(s) 228
BsaJI CCNNGG 9 cut(s) 57, 79, 242, 457, 882, 1082, 1273, 3060, 3193
BsaWI WCCGGW 1 cut(s) 2863
BsaXI ACNNNNNCTCC 2 cut(s) 1588, 1618
Bsc4I CCNNNNNNNGG 5 cut(s) 527, 593, 965, 1070, 3307
Bse118I RCCGGY 1 cut(s) 2863
Bse1I ACTGG 5 cut(s) 118, 317, 1234, 3157, 3398
Bse3DI GCAATG 3 cut(s) 300, 3048, 3090
Bse8I GATNNNNATC 1 cut(s) 2314
BseBI CCWGG 5 cut(s) 59, 459, 528, 1265, 3061
BseDI CCNNGG 9 cut(s) 57, 79, 242, 457, 882, 1082, 1273, 3060, 3193
BseJI GATNNNNATC 1 cut(s) 2314
BseLI CCNNNNNNNGG 5 cut(s) 527, 593, 965, 1070, 3307
BseMI GCAATG 3 cut(s) 300, 3048, 3090
BseMII CTCAG 8 cut(s) 36, 176, 258, 1044, 1398, 2213, 2352, 2843
BseNI ACTGG 5 cut(s) 118, 317, 1234, 3157, 3398
BsePI GCGCGC 1 cut(s) 2876
BseRI GAGGAG 7 cut(s) 117, 141, 150, 703, 1531, 2487, 2617
BseSI GKGCMC 1 cut(s) 3105
BseYI CCCAGC 2 cut(s) 2385, 2522
BsgI GTGCAG 2 cut(s) 2085, 2656
Bsh1236I CGCG 3 cut(s) 394, 2634, 2878
Bsh1285I CGRYCG 3 cut(s) 398, 3122, 3583
BshFI GGCC 7 cut(s) 881, 1233, 2078, 2142, 2853, 3231, 3442
BshNI GGYRCC 1 cut(s) 1454
BshTI ACCGGT 1 cut(s) 2863
BsiEI CGRYCG 3 cut(s) 398, 3122, 3583
BsiHKAI GWGCWC 2 cut(s) 21, 1806
BsiHKCI CYCGRG 1 cut(s) 3192
BsiSI CCGG 2 cut(s) 1222, 2864
BslFI GGGAC 8 cut(s) 292, 861, 1204, 1707, 2506, 2745, 3077, 3152
BslI CCNNNNNNNGG 5 cut(s) 527, 593, 965, 1070, 3307
BsmAI GTCTC 4 cut(s) 111, 2307, 3432, 3445
BsmBI CGTCTC 1 cut(s) 111
BsmFI GGGAC 8 cut(s) 292, 861, 1204, 1707, 2506, 2745, 3077, 3152
BsmI GAATGC 1 cut(s) 1202
BsnI GGCC 7 cut(s) 881, 1233, 2078, 2142, 2853, 3231, 3442
BsoBI CYCGRG 1 cut(s) 3192
Bsp1286I GDGCHC 4 cut(s) 21, 600, 1806, 3105
Bsp19I CCATGG 2 cut(s) 882, 1273
BspANI GGCC 7 cut(s) 881, 1233, 2078, 2142, 2853, 3231, 3442
BspCNI CTCAG 8 cut(s) 37, 175, 259, 1045, 1399, 2214, 2353, 2842
BspFNI CGCG 3 cut(s) 394, 2634, 2878
BspHI TCATGA 1 cut(s) 2914
BspLI GGNNCC 8 cut(s) 56, 582, 599, 1220, 1456, 1695, 1696, 2691
BspMAI CTGCAG 2 cut(s) 1537, 3388
BspMI ACCTGC 1 cut(s) 361
BspQI GCTCTTC 2 cut(s) 1494, 2476
BspT107I GGYRCC 1 cut(s) 1454
BsrDI GCAATG 3 cut(s) 300, 3048, 3090
BsrFI RCCGGY 1 cut(s) 2863
BsrI ACTGG 5 cut(s) 118, 317, 1234, 3157, 3398
BssAI RCCGGY 1 cut(s) 2863
BssECI CCNNGG 9 cut(s) 57, 79, 242, 457, 882, 1082, 1273, 3060, 3193
BssHII GCGCGC 1 cut(s) 2876
BssNAI GTATAC 1 cut(s) 350
BssNI GRCGYC 1 cut(s) 228
BssT1I CCWWGG 3 cut(s) 882, 1082, 1273
Bst1107I GTATAC 1 cut(s) 350
Bst2UI CCWGG 5 cut(s) 59, 459, 528, 1265, 3061
Bst6I CTCTTC 4 cut(s) 114, 1494, 2476, 2835
BstACI GRCGYC 1 cut(s) 228
BstAPI GCANNNNNTGC 3 cut(s) 2245, 2670, 3224
BstC8I GCNNGC 6 cut(s) 186, 2358, 2878, 2882, 3220, 3229
BstDSI CCRYGG 4 cut(s) 79, 242, 882, 1273
BstEII GGTNACC 1 cut(s) 2627
BstFNI CGCG 3 cut(s) 394, 2634, 2878
BstH2I RGCGCY 1 cut(s) 1990
BstHHI GCGC 3 cut(s) 1989, 2878, 2880
BstMAI GTCTC 4 cut(s) 111, 2307, 3432, 3445
BstMCI CGRYCG 3 cut(s) 398, 3122, 3583
BstNI CCWGG 5 cut(s) 59, 459, 528, 1265, 3061
BstNSI RCATGY 6 cut(s) 103, 2243, 2401, 2884, 3204, 3222
BstPAI GACNNNNGTC 1 cut(s) 561
BstPI GGTNACC 1 cut(s) 2627
BstSCI CCNGG 6 cut(s) 57, 457, 526, 1220, 1263, 3059
BstSFI CTRYAG 2 cut(s) 1533, 3384
BstSLI GKGCMC 1 cut(s) 3105
BstUI CGCG 3 cut(s) 394, 2634, 2878
BstV2I GAAGAC 2 cut(s) 1180, 1673
BstX2I RGATCY 7 cut(s) 9, 313, 1524, 2423, 2617, 2682, 2689
BstXI CCANNNNNNTGG 2 cut(s) 86, 1012
BstYI RGATCY 7 cut(s) 9, 313, 1524, 2423, 2617, 2682, 2689
BstZ17I GTATAC 1 cut(s) 350
BsuI GTATCC 2 cut(s) 2195, 2404
BsuRI GGCC 7 cut(s) 881, 1233, 2078, 2142, 2853, 3231, 3442
BtgI CCRYGG 4 cut(s) 79, 242, 882, 1273
BtsI GCAGTG 2 cut(s) 1783, 2274
BveI ACCTGC 1 cut(s) 361
Cac8I GCNNGC 6 cut(s) 186, 2358, 2878, 2882, 3220, 3229
CaiI CAGNNNCTG 4 cut(s) 1264, 1669, 2522, 3527
CciI TCATGA 1 cut(s) 2914
CfoI GCGC 3 cut(s) 1989, 2878, 2880
Cfr10I RCCGGY 1 cut(s) 2863
CseI GACGC 1 cut(s) 236
Csp6I GTAC 7 cut(s) 121, 512, 632, 2038, 2164, 2555, 3533
CspAI ACCGGT 1 cut(s) 2863
CviQI GTAC 7 cut(s) 121, 512, 632, 2038, 2164, 2555, 3533
DraIII CACNNNGTG 1 cut(s) 25
DrdI GACNNNNNNGTC 1 cut(s) 1216
DseDI GACNNNNNNGTC 1 cut(s) 1216
EaeI YGGCCR 3 cut(s) 879, 1231, 2076
Eam1104I CTCTTC 4 cut(s) 114, 1494, 2476, 2835
EarI CTCTTC 4 cut(s) 114, 1494, 2476, 2835
Eco130I CCWWGG 3 cut(s) 882, 1082, 1273
Eco24I GRGCYC 1 cut(s) 600
Eco47I GGWCC 8 cut(s) 41, 54, 115, 1218, 1694, 2454, 3168, 3550
Eco57I CTGAAG 4 cut(s) 357, 1332, 1857, 2457
Eco88I CYCGRG 1 cut(s) 3192
Eco91I GGTNACC 1 cut(s) 2627
EcoO109I RGGNCCY 1 cut(s) 1694
EcoO65I GGTNACC 1 cut(s) 2627
EcoRII CCWGG 5 cut(s) 57, 457, 526, 1263, 3059
EcoT14I CCWWGG 3 cut(s) 882, 1082, 1273
EcoT22I ATGCAT 1 cut(s) 2999
EcoT38I GRGCYC 1 cut(s) 600
ErhI CCWWGG 3 cut(s) 882, 1082, 1273
Esp3I CGTCTC 1 cut(s) 111
FalI AAGNNNNNCTT 2 cut(s) 3438, 3470
FaqI GGGAC 8 cut(s) 292, 861, 1204, 1707, 2506, 2745, 3077, 3152
FauI CCCGC 3 cut(s) 26, 3067, 3481
FauNDI CATATG 2 cut(s) 746, 1468
FbaI TGATCA 1 cut(s) 2794
FblI GTMKAC 3 cut(s) 349, 783, 813
FriOI GRGCYC 1 cut(s) 600
GlaI GCGC 3 cut(s) 1988, 2877, 2879
GsaI CCCAGC 2 cut(s) 2389, 2526
GsuI CTGGAG 1 cut(s) 510
HaeII RGCGCY 1 cut(s) 1990
HaeIII GGCC 7 cut(s) 881, 1233, 2078, 2142, 2853, 3231, 3442
HapII CCGG 2 cut(s) 1222, 2864
HgaI GACGC 1 cut(s) 236
HhaI GCGC 3 cut(s) 1989, 2878, 2880
Hin1I GRCGYC 1 cut(s) 228
Hin6I GCGC 3 cut(s) 1987, 2876, 2878
HinP1I GCGC 3 cut(s) 1987, 2876, 2878
HincII GTYRAC 6 cut(s) 649, 904, 1227, 1254, 1833, 1911
HindII GTYRAC 6 cut(s) 649, 904, 1227, 1254, 1833, 1911
HindIII AAGCTT 2 cut(s) 339, 3092
HpaI GTTAAC 1 cut(s) 1254
HpaII CCGG 2 cut(s) 1222, 2864
HphI GGTGA 5 cut(s) 284, 1551, 2107, 2639, 2903
HpyAV CCTTC 9 cut(s) 1024, 1112, 1572, 1852, 1948, 2027, 2153, 2373, 2722
Hsp92I GRCGYC 1 cut(s) 228
HspAI GCGC 3 cut(s) 1987, 2876, 2878
KflI GGGWCCC 1 cut(s) 1694
Ksp22I TGATCA 1 cut(s) 2794
KspAI GTTAAC 1 cut(s) 1254
LguI GCTCTTC 2 cut(s) 1494, 2476
LmnI GCTCC 9 cut(s) 171, 246, 586, 603, 705, 1439, 1801, 2382, 3407
MaeIII GTNAC 8 cut(s) 1171, 1341, 2095, 2578, 2596, 2627, 3148, 3346
MfeI CAATTG 2 cut(s) 559, 1419
MflI RGATCY 7 cut(s) 9, 313, 1524, 2423, 2617, 2682, 2689
MhlI GDGCHC 4 cut(s) 21, 600, 1806, 3105
MlsI TGGCCA 2 cut(s) 881, 1233
MluNI TGGCCA 2 cut(s) 881, 1233
MlyI GAGTC 3 cut(s) 1577, 2488, 3005
MmeI TCCRAC 1 cut(s) 2356
Mox20I TGGCCA 2 cut(s) 881, 1233
Mph1103I ATGCAT 1 cut(s) 2999
MroXI GAANNNNTTC 1 cut(s) 1845
MscI TGGCCA 2 cut(s) 881, 1233
MslI CAYNNNNRTG 3 cut(s) 674, 1005, 2957
Msp20I TGGCCA 2 cut(s) 881, 1233
MspA1I CMGCKG 5 cut(s) 188, 2221, 2519, 3362, 3576
MspI CCGG 2 cut(s) 1222, 2864
MspR9I CCNGG 6 cut(s) 59, 459, 528, 1222, 1265, 3061
MunI CAATTG 2 cut(s) 559, 1419
Mva1269I GAATGC 1 cut(s) 1202
MvaI CCWGG 5 cut(s) 59, 459, 528, 1265, 3061
MvnI CGCG 3 cut(s) 394, 2634, 2878
NciI CCSGG 1 cut(s) 1222
NcoI CCATGG 2 cut(s) 882, 1273
NdeI CATATG 2 cut(s) 746, 1468
NlaIV GGNNCC 8 cut(s) 56, 582, 599, 1220, 1456, 1695, 1696, 2691
NmuCI GTSAC 2 cut(s) 2095, 2627
NsiI ATGCAT 1 cut(s) 2999
NspI RCATGY 6 cut(s) 103, 2243, 2401, 2884, 3204, 3222
OliI CACNNNNGTG 2 cut(s) 674, 2957
PacI TTAATTAA 1 cut(s) 660
PaeI GCATGC 2 cut(s) 2884, 3222
PagI TCATGA 1 cut(s) 2914
PauI GCGCGC 1 cut(s) 2876
PciI ACATGT 1 cut(s) 3200
PciSI GCTCTTC 2 cut(s) 1494, 2476
PctI GAATGC 1 cut(s) 1202
PdmI GAANNNNTTC 1 cut(s) 1845
PfeI GAWTC 8 cut(s) 49, 218, 238, 1268, 1751, 2120, 2271, 3115
PflMI CCANNNNNTGG 1 cut(s) 593
PfoI TCCNGGA 2 cut(s) 526, 1263
PinAI ACCGGT 1 cut(s) 2863
PleI GAGTC 3 cut(s) 1577, 2488, 3005
PpsI GAGTC 3 cut(s) 1577, 2488, 3005
PpuMI RGGWCCY 1 cut(s) 1694
PscI ACATGT 1 cut(s) 3200
PshAI GACNNNNGTC 1 cut(s) 561
PsiI TTATAA 1 cut(s) 1415
Psp5II RGGWCCY 1 cut(s) 1694
Psp6I CCWGG 5 cut(s) 57, 457, 526, 1263, 3059
PspEI GGTNACC 1 cut(s) 2627
PspFI CCCAGC 2 cut(s) 2385, 2522
PspGI CCWGG 5 cut(s) 57, 457, 526, 1263, 3059
PspN4I GGNNCC 8 cut(s) 56, 582, 599, 1220, 1456, 1695, 1696, 2691
PspPPI RGGWCCY 1 cut(s) 1694
PstI CTGCAG 2 cut(s) 1537, 3388
PstNI CAGNNNCTG 4 cut(s) 1264, 1669, 2522, 3527
PsuI RGATCY 7 cut(s) 9, 313, 1524, 2423, 2617, 2682, 2689
PteI GCGCGC 1 cut(s) 2876
PvuII CAGCTG 3 cut(s) 188, 2221, 2519
RsaI GTAC 7 cut(s) 122, 513, 633, 2039, 2165, 2556, 3534
RsaNI GTAC 7 cut(s) 121, 512, 632, 2038, 2164, 2555, 3533
RseI CAYNNNNRTG 3 cut(s) 674, 1005, 2957
SapI GCTCTTC 2 cut(s) 1494, 2476
SchI GAGTC 3 cut(s) 1577, 2488, 3005
ScrFI CCNGG 6 cut(s) 59, 459, 528, 1222, 1265, 3061
SduI GDGCHC 4 cut(s) 21, 600, 1806, 3105
SfcI CTRYAG 2 cut(s) 1533, 3384
SinI GGWCC 8 cut(s) 41, 54, 115, 1218, 1694, 2454, 3168, 3550
SmiMI CAYNNNNRTG 3 cut(s) 674, 1005, 2957
SmlI CTYRAG 5 cut(s) 683, 908, 1197, 3444, 3554
SmoI CTYRAG 5 cut(s) 683, 908, 1197, 3444, 3554
SphI GCATGC 2 cut(s) 2884, 3222
SspI AATATT 3 cut(s) 716, 3237, 3251
StyD4I CCNGG 6 cut(s) 57, 457, 526, 1220, 1263, 3059
StyI CCWWGG 3 cut(s) 882, 1082, 1273
TaqI TCGA 5 cut(s) 15, 538, 2767, 3040, 3122
TaqII GACCGA 1 cut(s) 3108
TatI WGTACW 1 cut(s) 2554
TauI GCSGC 1 cut(s) 3579
TfiI GAWTC 8 cut(s) 49, 218, 238, 1268, 1751, 2120, 2271, 3115
TseFI GTSAC 2 cut(s) 2095, 2627
Tsp45I GTSAC 2 cut(s) 2095, 2627
TspGWI ACGGA 5 cut(s) 259, 947, 1445, 2738, 3563
Van91I CCANNNNNTGG 1 cut(s) 593
VpaK11BI GGWCC 8 cut(s) 41, 54, 115, 1218, 1694, 2454, 3168, 3550
XapI RAATTY 7 cut(s) 285, 358, 662, 693, 1393, 2111, 3021
XbaI TCTAGA 1 cut(s) 2836
XceI RCATGY 6 cut(s) 103, 2243, 2401, 2884, 3204, 3222
XmiI GTMKAC 3 cut(s) 349, 783, 813
XmnI GAANNNNTTC 1 cut(s) 1845
Zsp2I ATGCAT 1 cut(s) 2999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.