DENN domain and WD repeat-containing protein SCD1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1503 |
| AccB1I | GGYRCC | 1 cut(s) | 1503 |
| AccI | GTMKAC | 1 cut(s) | 253 |
| AccII | CGCG | 1 cut(s) | 701 |
| AciI | CCGC | 3 cut(s) | 257, 485, 701 |
| AclWI | GGATC | 8 cut(s) | 539, 571, 887, 900, 1100, 1533, 1556, 1610 |
| AcsI | RAATTY | 6 cut(s) | 452, 861, 884, 914, 1051, 1652 |
| AcuI | CTGAAG | 3 cut(s) | 191, 800, 1541 |
| AfaI | GTAC | 2 cut(s) | 1442, 1505 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 367 |
| AgsI | TTSAA | 9 cut(s) | 126, 332, 458, 852, 866, 962, 1021, 1057, 1601 |
| AjnI | CCWGG | 1 cut(s) | 234 |
| Alw21I | GWGCWC | 2 cut(s) | 204, 244 |
| Alw26I | GTCTC | 2 cut(s) | 607, 1237 |
| Alw44I | GTGCAC | 1 cut(s) | 200 |
| AlwI | GGATC | 8 cut(s) | 539, 571, 887, 900, 1100, 1533, 1556, 1610 |
| AoxI | GGCC | 1 cut(s) | 1151 |
| ApaLI | GTGCAC | 1 cut(s) | 200 |
| ApeKI | GCWGC | 2 cut(s) | 25, 1451 |
| ApoI | RAATTY | 6 cut(s) | 452, 861, 884, 914, 1051, 1652 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 14, 46, 870, 902 |
| AseI | ATTAAT | 1 cut(s) | 975 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 121, 321, 774, 811, 1124 |
| Asp718I | GGTACC | 1 cut(s) | 1503 |
| AspLEI | GCGC | 1 cut(s) | 701 |
| AspS9I | GGNCC | 3 cut(s) | 878, 935, 1371 |
| AsuHPI | GGTGA | 1 cut(s) | 499 |
| AsuNHI | GCTAGC | 1 cut(s) | 992 |
| AvaII | GGWCC | 3 cut(s) | 878, 935, 1371 |
| BaeGI | GKGCMC | 2 cut(s) | 204, 827 |
| BaeI | ACNNNNGTAYC | 5 cut(s) | 30, 471, 504, 1235, 1268 |
| BamHI | GGATCC | 1 cut(s) | 892 |
| BanI | GGYRCC | 1 cut(s) | 1503 |
| BanII | GRGCYC | 1 cut(s) | 244 |
| BbsI | GAAGAC | 1 cut(s) | 1304 |
| Bbv12I | GWGCWC | 2 cut(s) | 204, 244 |
| BbvCI | CCTCAGC | 2 cut(s) | 294, 412 |
| BbvI | GCAGC | 2 cut(s) | 12, 1438 |
| BceAI | ACGGC | 1 cut(s) | 1234 |
| BciT130I | CCWGG | 1 cut(s) | 236 |
| BcoDI | GTCTC | 2 cut(s) | 607, 1237 |
| BfaI | CTAG | 9 cut(s) | 74, 717, 993, 1130, 1421, 1529, 1541, 1566, 1574 |
| BfmI | CTRYAG | 5 cut(s) | 26, 665, 828, 1224, 1452 |
| BisI | GCNGC | 2 cut(s) | 26, 1452 |
| BlsI | GCNGC | 2 cut(s) | 27, 1453 |
| BmcAI | AGTACT | 1 cut(s) | 1442 |
| Bme1390I | CCNGG | 1 cut(s) | 236 |
| Bme18I | GGWCC | 3 cut(s) | 878, 935, 1371 |
| BmgT120I | GGNCC | 3 cut(s) | 878, 935, 1371 |
| BmiI | GGNNCC | 3 cut(s) | 894, 1505, 1606 |
| BmrFI | CCNGG | 1 cut(s) | 236 |
| BmsI | GCATC | 2 cut(s) | 1204, 1409 |
| BmtI | GCTAGC | 1 cut(s) | 996 |
| BpiI | GAAGAC | 1 cut(s) | 1304 |
| BpmI | CTGGAG | 2 cut(s) | 588, 762 |
| Bpu10I | CCTNAGC | 3 cut(s) | 294, 412, 591 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1097 |
| BsaI | GGTCTC | 1 cut(s) | 607 |
| BsaJI | CCNNGG | 5 cut(s) | 48, 112, 234, 235, 1275 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 367 |
| Bse1I | ACTGG | 2 cut(s) | 605, 1550 |
| Bse3DI | GCAATG | 2 cut(s) | 592, 880 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1097 |
| BseBI | CCWGG | 1 cut(s) | 236 |
| BseDI | CCNNGG | 5 cut(s) | 48, 112, 234, 235, 1275 |
| BseGI | GGATG | 1 cut(s) | 1400 |
| BseJI | GATNNNNATC | 1 cut(s) | 1097 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 367 |
| BseMI | GCAATG | 2 cut(s) | 592, 880 |
| BseMII | CTCAG | 6 cut(s) | 285, 426, 605, 794, 969, 1078 |
| BseNI | ACTGG | 2 cut(s) | 605, 1550 |
| BseRI | GAGGAG | 1 cut(s) | 412 |
| BseSI | GKGCMC | 2 cut(s) | 204, 827 |
| BseXI | GCAGC | 2 cut(s) | 12, 1438 |
| Bsh1236I | CGCG | 1 cut(s) | 701 |
| BshFI | GGCC | 1 cut(s) | 1153 |
| BshNI | GGYRCC | 1 cut(s) | 1503 |
| BsiHKAI | GWGCWC | 2 cut(s) | 204, 244 |
| BslFI | GGGAC | 1 cut(s) | 1215 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 367 |
| BsmAI | GTCTC | 2 cut(s) | 607, 1237 |
| BsmFI | GGGAC | 1 cut(s) | 1215 |
| BsmI | GAATGC | 3 cut(s) | 795, 1085, 1126 |
| BsnI | GGCC | 1 cut(s) | 1153 |
| Bso31I | GGTCTC | 1 cut(s) | 607 |
| Bsp1286I | GDGCHC | 3 cut(s) | 204, 244, 827 |
| Bsp143I | GATC | 7 cut(s) | 544, 576, 892, 1092, 1525, 1548, 1615 |
| BspACI | CCGC | 3 cut(s) | 257, 485, 701 |
| BspANI | GGCC | 1 cut(s) | 1153 |
| BspCNI | CTCAG | 6 cut(s) | 286, 425, 604, 795, 968, 1077 |
| BspFNI | CGCG | 1 cut(s) | 701 |
| BspLI | GGNNCC | 3 cut(s) | 894, 1505, 1606 |
| BspMAI | CTGCAG | 2 cut(s) | 30, 1456 |
| BspOI | GCTAGC | 1 cut(s) | 996 |
| BspPI | GGATC | 8 cut(s) | 539, 571, 887, 900, 1100, 1533, 1556, 1610 |
| BspQI | GCTCTTC | 2 cut(s) | 112, 327 |
| BspT107I | GGYRCC | 1 cut(s) | 1503 |
| BspTNI | GGTCTC | 1 cut(s) | 607 |
| BsrDI | GCAATG | 2 cut(s) | 592, 880 |
| BsrI | ACTGG | 2 cut(s) | 605, 1550 |
| BssECI | CCNNGG | 5 cut(s) | 48, 112, 234, 235, 1275 |
| BssMI | GATC | 7 cut(s) | 544, 576, 892, 1092, 1525, 1548, 1615 |
| BssT1I | CCWWGG | 3 cut(s) | 48, 112, 1275 |
| Bst2UI | CCWGG | 1 cut(s) | 236 |
| Bst4CI | ACNGT | 3 cut(s) | 669, 1338, 1629 |
| Bst6I | CTCTTC | 8 cut(s) | 112, 124, 186, 306, 327, 460, 511, 605 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 343 |
| BstC8I | GCNNGC | 2 cut(s) | 994, 1083 |
| BstDEI | CTNAG | 9 cut(s) | 182, 294, 403, 412, 591, 803, 955, 1064, 1444 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 365 |
| BstF5I | GGATG | 1 cut(s) | 1400 |
| BstFNI | CGCG | 1 cut(s) | 701 |
| BstHHI | GCGC | 1 cut(s) | 701 |
| BstKTI | GATC | 7 cut(s) | 547, 579, 895, 1095, 1528, 1551, 1618 |
| BstMAI | GTCTC | 2 cut(s) | 607, 1237 |
| BstMBI | GATC | 7 cut(s) | 544, 576, 892, 1092, 1525, 1548, 1615 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 265, 299, 334, 343, 792 |
| BstNI | CCWGG | 1 cut(s) | 236 |
| BstNSI | RCATGY | 1 cut(s) | 350 |
| BstSCI | CCNGG | 1 cut(s) | 234 |
| BstSFI | CTRYAG | 5 cut(s) | 26, 665, 828, 1224, 1452 |
| BstSLI | GKGCMC | 2 cut(s) | 204, 827 |
| BstUI | CGCG | 1 cut(s) | 701 |
| BstV1I | GCAGC | 2 cut(s) | 12, 1438 |
| BstV2I | GAAGAC | 1 cut(s) | 1304 |
| BstX2I | RGATCY | 3 cut(s) | 892, 1525, 1548 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 888 |
| BstYI | RGATCY | 3 cut(s) | 892, 1525, 1548 |
| BsuRI | GGCC | 1 cut(s) | 1153 |
| BtsCI | GGATG | 1 cut(s) | 1400 |
| BtsI | GCAGTG | 2 cut(s) | 1395, 1461 |
| BtsIMutI | CAGTG | 4 cut(s) | 474, 612, 1395, 1461 |
| Cac8I | GCNNGC | 2 cut(s) | 994, 1083 |
| CfoI | GCGC | 1 cut(s) | 701 |
| Cfr13I | GGNCC | 3 cut(s) | 878, 935, 1371 |
| Csp6I | GTAC | 2 cut(s) | 1441, 1504 |
| CviAII | CATG | 7 cut(s) | 34, 188, 347, 540, 1359, 1642, 1680 |
| CviQI | GTAC | 2 cut(s) | 1441, 1504 |
| DdeI | CTNAG | 9 cut(s) | 182, 294, 403, 412, 591, 803, 955, 1064, 1444 |
| DpnI | GATC | 7 cut(s) | 546, 578, 894, 1094, 1527, 1550, 1617 |
| DpnII | GATC | 7 cut(s) | 544, 576, 892, 1092, 1525, 1548, 1615 |
| Eam1104I | CTCTTC | 8 cut(s) | 112, 124, 186, 306, 327, 460, 511, 605 |
| EarI | CTCTTC | 8 cut(s) | 112, 124, 186, 306, 327, 460, 511, 605 |
| Ecl136II | GAGCTC | 1 cut(s) | 242 |
| Eco130I | CCWWGG | 3 cut(s) | 48, 112, 1275 |
| Eco147I | AGGCCT | 1 cut(s) | 1153 |
| Eco24I | GRGCYC | 1 cut(s) | 244 |
| Eco31I | GGTCTC | 1 cut(s) | 607 |
| Eco32I | GATATC | 2 cut(s) | 55, 628 |
| Eco47I | GGWCC | 3 cut(s) | 878, 935, 1371 |
| Eco53kI | GAGCTC | 1 cut(s) | 242 |
| Eco57I | CTGAAG | 3 cut(s) | 191, 800, 1541 |
| EcoICRI | GAGCTC | 1 cut(s) | 242 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 365 |
| EcoRI | GAATTC | 2 cut(s) | 861, 1652 |
| EcoRII | CCWGG | 1 cut(s) | 234 |
| EcoRV | GATATC | 2 cut(s) | 55, 628 |
| EcoT14I | CCWWGG | 3 cut(s) | 48, 112, 1275 |
| EcoT38I | GRGCYC | 1 cut(s) | 244 |
| ErhI | CCWWGG | 3 cut(s) | 48, 112, 1275 |
| FaeI | CATG | 7 cut(s) | 37, 191, 350, 543, 1362, 1645, 1683 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 386, 418, 557, 589, 696, 728, 1065, 1097 |
| FaqI | GGGAC | 1 cut(s) | 1215 |
| FatI | CATG | 7 cut(s) | 33, 187, 346, 539, 1358, 1641, 1679 |
| FblI | GTMKAC | 1 cut(s) | 253 |
| Fnu4HI | GCNGC | 2 cut(s) | 26, 1452 |
| FokI | GGATG | 1 cut(s) | 1387 |
| FriOI | GRGCYC | 1 cut(s) | 244 |
| Fsp4HI | GCNGC | 2 cut(s) | 26, 1452 |
| FspBI | CTAG | 9 cut(s) | 74, 717, 993, 1130, 1421, 1529, 1541, 1566, 1574 |
| GlaI | GCGC | 1 cut(s) | 700 |
| GluI | GCNGC | 2 cut(s) | 26, 1452 |
| GsuI | CTGGAG | 2 cut(s) | 588, 762 |
| HaeIII | GGCC | 1 cut(s) | 1153 |
| HhaI | GCGC | 1 cut(s) | 701 |
| Hin1II | CATG | 7 cut(s) | 37, 191, 350, 543, 1362, 1645, 1683 |
| Hin6I | GCGC | 1 cut(s) | 699 |
| HinP1I | GCGC | 1 cut(s) | 699 |
| HincII | GTYRAC | 1 cut(s) | 379 |
| HindII | GTYRAC | 1 cut(s) | 379 |
| HindIII | AAGCTT | 3 cut(s) | 179, 1079, 1490 |
| HinfI | GANTC | 7 cut(s) | 12, 428, 445, 532, 601, 653, 1532 |
| HphI | GGTGA | 1 cut(s) | 499 |
| Hpy166II | GTNNAC | 5 cut(s) | 202, 254, 379, 1393, 1571 |
| Hpy188I | TCNGA | 6 cut(s) | 511, 769, 780, 913, 1013, 1333 |
| Hpy8I | GTNNAC | 5 cut(s) | 202, 254, 379, 1393, 1571 |
| HpyAV | CCTTC | 5 cut(s) | 852, 1174, 1279, 1565, 1595 |
| HpyCH4III | ACNGT | 3 cut(s) | 669, 1338, 1629 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 265, 299, 334, 343, 792 |
| HpyF3I | CTNAG | 9 cut(s) | 182, 294, 403, 412, 591, 803, 955, 1064, 1444 |
| Hsp92II | CATG | 7 cut(s) | 37, 191, 350, 543, 1362, 1645, 1683 |
| HspAI | GCGC | 1 cut(s) | 699 |
| KpnI | GGTACC | 1 cut(s) | 1507 |
| Kzo9I | GATC | 7 cut(s) | 544, 576, 892, 1092, 1525, 1548, 1615 |
| LguI | GCTCTTC | 2 cut(s) | 112, 327 |
| LmnI | GCTCC | 4 cut(s) | 46, 239, 399, 1604 |
| Lsp1109I | GCAGC | 2 cut(s) | 12, 1438 |
| LweI | GCATC | 2 cut(s) | 1204, 1409 |
| MaeI | CTAG | 9 cut(s) | 74, 717, 993, 1130, 1421, 1529, 1541, 1566, 1574 |
| MaeIII | GTNAC | 4 cut(s) | 472, 682, 1165, 1342 |
| MalI | GATC | 7 cut(s) | 546, 578, 894, 1094, 1527, 1550, 1617 |
| MboI | GATC | 7 cut(s) | 544, 576, 892, 1092, 1525, 1548, 1615 |
| MfeI | CAATTG | 1 cut(s) | 621 |
| MflI | RGATCY | 3 cut(s) | 892, 1525, 1548 |
| MhlI | GDGCHC | 3 cut(s) | 204, 244, 827 |
| MlyI | GAGTC | 2 cut(s) | 21, 595 |
| MmeI | TCCRAC | 1 cut(s) | 68 |
| MroXI | GAANNNNTTC | 5 cut(s) | 121, 321, 774, 811, 1124 |
| MseI | TTAA | 3 cut(s) | 225, 597, 975 |
| MslI | CAYNNNNRTG | 2 cut(s) | 585, 1172 |
| MspA1I | CMGCKG | 2 cut(s) | 416, 485 |
| MspR9I | CCNGG | 1 cut(s) | 236 |
| MunI | CAATTG | 1 cut(s) | 621 |
| Mva1269I | GAATGC | 3 cut(s) | 795, 1085, 1126 |
| MvaI | CCWGG | 1 cut(s) | 236 |
| MvnI | CGCG | 1 cut(s) | 701 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 265, 299, 334, 343, 792 |
| NdeII | GATC | 7 cut(s) | 544, 576, 892, 1092, 1525, 1548, 1615 |
| NheI | GCTAGC | 1 cut(s) | 992 |
| NlaIII | CATG | 7 cut(s) | 37, 191, 350, 543, 1362, 1645, 1683 |
| NlaIV | GGNNCC | 3 cut(s) | 894, 1505, 1606 |
| NmuCI | GTSAC | 3 cut(s) | 472, 682, 1165 |
| NspI | RCATGY | 1 cut(s) | 350 |
| PasI | CCCWGGG | 1 cut(s) | 235 |
| PceI | AGGCCT | 1 cut(s) | 1153 |
| PciSI | GCTCTTC | 2 cut(s) | 112, 327 |
| PctI | GAATGC | 3 cut(s) | 795, 1085, 1126 |
| PdmI | GAANNNNTTC | 5 cut(s) | 121, 321, 774, 811, 1124 |
| PfeI | GAWTC | 5 cut(s) | 428, 445, 532, 653, 1532 |
| PkrI | GCNGC | 2 cut(s) | 27, 1453 |
| PleI | GAGTC | 2 cut(s) | 20, 595 |
| PpsI | GAGTC | 2 cut(s) | 20, 595 |
| PshBI | ATTAAT | 1 cut(s) | 975 |
| Psp124BI | GAGCTC | 1 cut(s) | 244 |
| Psp6I | CCWGG | 1 cut(s) | 234 |
| PspGI | CCWGG | 1 cut(s) | 234 |
| PspN4I | GGNNCC | 3 cut(s) | 894, 1505, 1606 |
| PspPI | GGNCC | 3 cut(s) | 878, 935, 1371 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1125, 1157 |
| PstI | CTGCAG | 2 cut(s) | 30, 1456 |
| PsuI | RGATCY | 3 cut(s) | 892, 1525, 1548 |
| PvuII | CAGCTG | 1 cut(s) | 416 |
| RsaI | GTAC | 2 cut(s) | 1442, 1505 |
| RsaNI | GTAC | 2 cut(s) | 1441, 1504 |
| RseI | CAYNNNNRTG | 2 cut(s) | 585, 1172 |
| SacI | GAGCTC | 1 cut(s) | 244 |
| SapI | GCTCTTC | 2 cut(s) | 112, 327 |
| SaqAI | TTAA | 3 cut(s) | 225, 597, 975 |
| SatI | GCNGC | 2 cut(s) | 26, 1452 |
| Sau3AI | GATC | 7 cut(s) | 544, 576, 892, 1092, 1525, 1548, 1615 |
| Sau96I | GGNCC | 3 cut(s) | 878, 935, 1371 |
| ScaI | AGTACT | 1 cut(s) | 1442 |
| SchI | GAGTC | 2 cut(s) | 21, 595 |
| ScrFI | CCNGG | 1 cut(s) | 236 |
| SduI | GDGCHC | 3 cut(s) | 204, 244, 827 |
| SfaNI | GCATC | 2 cut(s) | 1204, 1409 |
| SfcI | CTRYAG | 5 cut(s) | 26, 665, 828, 1224, 1452 |
| SinI | GGWCC | 3 cut(s) | 878, 935, 1371 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 585, 1172 |
| SseBI | AGGCCT | 1 cut(s) | 1153 |
| SsiI | CCGC | 3 cut(s) | 257, 485, 701 |
| SspI | AATATT | 1 cut(s) | 775 |
| SspMI | CTAG | 9 cut(s) | 74, 717, 993, 1130, 1421, 1529, 1541, 1566, 1574 |
| SstI | GAGCTC | 1 cut(s) | 244 |
| StuI | AGGCCT | 1 cut(s) | 1153 |
| StyD4I | CCNGG | 1 cut(s) | 234 |
| StyI | CCWWGG | 3 cut(s) | 48, 112, 1275 |
| TaaI | ACNGT | 3 cut(s) | 669, 1338, 1629 |
| TaqI | TCGA | 4 cut(s) | 463, 985, 1212, 1469 |
| TatI | WGTACW | 1 cut(s) | 1440 |
| TfiI | GAWTC | 5 cut(s) | 428, 445, 532, 653, 1532 |
| Tru1I | TTAA | 3 cut(s) | 225, 597, 975 |
| Tru9I | TTAA | 3 cut(s) | 225, 597, 975 |
| TscAI | CASTG | 4 cut(s) | 481, 612, 1402, 1461 |
| TseFI | GTSAC | 3 cut(s) | 472, 682, 1165 |
| TseI | GCWGC | 2 cut(s) | 25, 1451 |
| Tsp45I | GTSAC | 3 cut(s) | 472, 682, 1165 |
| TspDTI | ATGAA | 7 cut(s) | 50, 204, 569, 1133, 1431, 1455, 1665 |
| TspGWI | ACGGA | 2 cut(s) | 927, 1152 |
| TspRI | CASTG | 4 cut(s) | 481, 612, 1402, 1461 |
| VneI | GTGCAC | 1 cut(s) | 200 |
| VpaK11BI | GGWCC | 3 cut(s) | 878, 935, 1371 |
| VspI | ATTAAT | 1 cut(s) | 975 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 365 |
| XapI | RAATTY | 6 cut(s) | 452, 861, 884, 914, 1051, 1652 |
| XbaI | TCTAGA | 1 cut(s) | 1528 |
| XceI | RCATGY | 1 cut(s) | 350 |
| XmiI | GTMKAC | 1 cut(s) | 253 |
| XmnI | GAANNNNTTC | 5 cut(s) | 121, 321, 774, 811, 1124 |
| XspI | CTAG | 9 cut(s) | 74, 717, 993, 1130, 1421, 1529, 1541, 1566, 1574 |
| ZrmI | AGTACT | 1 cut(s) | 1442 |