Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0000282

Physical Location & Seq

Genomic Coordinates Forward (+)

44690502 .. 44693884

Gene Structure 3383 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG350700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGAGTCCTTCAACAATGACCATCCTTCTCTTCTTCGTTGCCCTCATCTTGTCTCTCATCGCTGCAGCCTTCTCAAAACCAAAGCACAAGAAGCTACCTCCTGGACCTTTGGCACTACCGGTCATTGGTCACCTTCACATGCTAGGCAATCTCCCACATCGCAGCCTCCAACACTTGGCCAAAAAATATGGACCCATAATGTCTATTCGTCTAGGGAATGTACGCGCCATACTAGTCTCATCCCCAAAAGCAGCAAAGCTATTCCTCAAAACCCATGACGCCAATTTCGCTAGCCGGCCAAGAGTCCAGGCCTCGGAGCACCTAGCTTATGGCACGATGGGCCTGGTCTTTGCCGAGTACGGCCCCTATTGGCGCCATGTGAGGAAGCTCTGCACCCTCGAGCTTCTTTGTCCCTCGAAAACCGAGGCTTTTGCGCCACTGCGAAGGGAGGAGATAGGGCTGTTGGTGCTGTCGCTGAAGAAAGCTGGAGAGGGAGGTGAGGTGGTGGATGTTACTAACAAGATTTATGGCCTTAATGAGGATATAACGTATAGGATGATATTGGGTTGTGCTTTTGATGATGGTAGGTTTGGTTTGAAGGATATTGTTCAGGAAGCTACGTTGTTGACCGGAGCATTCAACATAGCTGATTTTGTGCCCTTCCTCGGTCCATTTGATTTTCAGGGATTGACTAAGCGCTTAAAGAAAGTTAGCAAGACGATTGATCAACTCCTGGAGAAGATAATAGACGAGCATGAACAAGTTGCCAACACTAGGAGTTGGAAACAAGGCCAGCATGAGGACTTTGTAGACGTGTTACTTTCGTTAATGAACCAACCGTTGAACCCGAATGATGAGCAAGTACACTTTCTTGATAGAACAAATGTGAAAGCCATCTTACTAGACATGATCACGGCGGCTTTTGATACTTCAGCCACATCGATTGTTTGGAGCCTTGCCGAGCTCTTGAGGCATCCAAGGATCATGAAGAATCTCCAAGAAGAGCTCCAAAGTGTGGTTGGTATGGACCGAATGGTGGAAGAATCTGATTTGCCCAAGCTGGATTACTTGAGTATGGTGGTGAAGGAGAGCTTCAGACTACACCCAGTTGCACCTTTACTAGTCCCACGTGAATCCATCGAGGACATTACAATTGATGGATATGACATACCCAAGAAGTCGCGGATCATAGTAAACATCTGGAGTATTGGAAGAGATCCTAATGTTTGGTCGGAAAATGTGGAGGAATTTTTTCCTGAAAGGTTCATGAACATCAATATAGGCCTCCGGGGACATGACTTTCAGCTCATCCCATTTGGGTCTGGGCGAAGAGGGTGTCCGGGTATGCAATTAGGGCTAACCACAGTTCGGCTAGTTCTGGCACAGCTGGTGCATTGCTTTAACTGGGAGCTCCCAAATGGCTTGCTACCTCAACACTTGGACATGTCCGAGGATTTCGGCTTATCACTGTCAAAGGTCAAACACTTGCTTGCTAAGCCAACGTACCGTCTTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0055114 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

505

Amino Acids

56.88

Weight (kDa)

8.16

Isoelectric Point (pI)

40.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	33 - 486	4.1e-100	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000282)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica	MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica	Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis	pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis	RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata	RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora	Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa	Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha	Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana	Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	372
AccB7I	CCANNNNNTGG	2 cut(s)	175, 1015
AccI	GTMKAC	1 cut(s)	810
AccII	CGCG	2 cut(s)	225, 1183
AciI	CCGC	2 cut(s)	917, 1183
AclWI	GGATC	3 cut(s)	989, 1193, 1211
AcoI	YGGCCR	2 cut(s)	177, 296
AcsI	RAATTY	1 cut(s)	1247
AcuI	CTGAAG	3 cut(s)	497, 915, 1078
AcvI	CACGTG	1 cut(s)	1130
AcyI	GRCGYC	2 cut(s)	279, 373
AfaI	GTAC	4 cut(s)	222, 359, 864, 1505
AfeI	AGCGCT	1 cut(s)	698
AflIII	ACRYGT	2 cut(s)	813, 1443
AgeI	ACCGGT	1 cut(s)	118
AgsI	TTSAA	4 cut(s)	12, 598, 640, 844
AhlI	ACTAGT	2 cut(s)	232, 1120
AjiI	CACGTC	1 cut(s)	814
AjnI	CCWGG	4 cut(s)	100, 306, 342, 732
Alw21I	GWGCWC	4 cut(s)	321, 966, 1008, 1413
Alw26I	GTCTC	2 cut(s)	57, 241
AlwI	GGATC	3 cut(s)	989, 1193, 1211
Ama87I	CYCGRG	1 cut(s)	398
Aor51HI	AGCGCT	1 cut(s)	698
AoxI	GGCC	8 cut(s)	177, 296, 309, 340, 361, 529, 790, 1282
ApeKI	GCWGC	4 cut(s)	62, 65, 162, 251
ApoI	RAATTY	1 cut(s)	1247
ArsI	GACNNNNNNTTYG	4 cut(s)	269, 301, 1321, 1353
AsiGI	ACCGGT	1 cut(s)	118
Asp700I	GAANNNNTTC	1 cut(s)	1251
AspLEI	GCGC	4 cut(s)	227, 375, 436, 699
AspS9I	GGNCC	6 cut(s)	104, 191, 340, 362, 668, 1027
AsuC2I	CCSGG	2 cut(s)	1289, 1341
AsuHPI	GGTGA	3 cut(s)	122, 509, 1093
AsuNHI	GCTAGC	1 cut(s)	290
AvaI	CYCGRG	1 cut(s)	398
AvaII	GGWCC	4 cut(s)	104, 191, 668, 1027
BaeGI	GKGCMC	1 cut(s)	660
BalI	TGGCCA	1 cut(s)	179
BanI	GGYRCC	1 cut(s)	372
BanII	GRGCYC	3 cut(s)	966, 1008, 1413
BbrPI	CACGTG	1 cut(s)	1130
Bbv12I	GWGCWC	4 cut(s)	321, 966, 1008, 1413
BbvI	GCAGC	4 cut(s)	49, 77, 174, 263
BccI	CCATC	6 cut(s)	29, 331, 575, 902, 1145, 1151
BceAI	ACGGC	2 cut(s)	376, 930
BcgI	CGANNNNNNTGC	2 cut(s)	413, 447
BciT130I	CCWGG	4 cut(s)	102, 308, 344, 734
BclI	TGATCA	2 cut(s)	724, 909
BcnI	CCSGG	2 cut(s)	1289, 1341
BcoDI	GTCTC	2 cut(s)	57, 241
BcuI	ACTAGT	2 cut(s)	232, 1120
BfaI	CTAG	9 cut(s)	143, 212, 233, 291, 323, 774, 902, 1121, 1373
BfmI	CTRYAG	1 cut(s)	63
BfoI	RGCGCY	2 cut(s)	376, 700
BisI	GCNGC	5 cut(s)	63, 66, 163, 252, 918
BlpI	GCTNAGC	1 cut(s)	1494
BlsI	GCNGC	5 cut(s)	64, 67, 164, 253, 919
Bme1390I	CCNGG	6 cut(s)	102, 308, 344, 734, 1289, 1341
Bme18I	GGWCC	4 cut(s)	104, 191, 668, 1027
BmeT110I	CYCGRG	1 cut(s)	398
BmgBI	CACGTC	1 cut(s)	814
BmgT120I	GGNCC	6 cut(s)	104, 191, 340, 362, 668, 1027
BmiI	GGNNCC	4 cut(s)	193, 364, 374, 953
BmrFI	CCNGG	6 cut(s)	102, 308, 344, 734, 1289, 1341
BmrI	ACTGGG	2 cut(s)	1100, 1414
BmsI	GCATC	1 cut(s)	982
BmtI	GCTAGC	1 cut(s)	294
BmuI	ACTGGG	2 cut(s)	1100, 1414
BpmI	CTGGAG	3 cut(s)	507, 755, 1222
Bpu1102I	GCTNAGC	1 cut(s)	1494
BpuEI	CTTGAG	2 cut(s)	988, 1090
BpuMI	CCSGG	2 cut(s)	1289, 1341
Bsa29I	ATCGAT	1 cut(s)	941
BsaAI	YACGTR	1 cut(s)	1130
BsaHI	GRCGYC	2 cut(s)	279, 373
BsaJI	CCNNGG	6 cut(s)	312, 423, 664, 977, 1288, 1449
BsaWI	WCCGGW	2 cut(s)	118, 629
BsaXI	ACNNNNNCTCC	2 cut(s)	486, 516
Bse118I	RCCGGY	2 cut(s)	118, 294
Bse1I	ACTGG	2 cut(s)	1106, 1409
Bse3DI	GCAATG	1 cut(s)	1393
BseBI	CCWGG	4 cut(s)	102, 308, 344, 734
BseCI	ATCGAT	1 cut(s)	941
BseDI	CCNNGG	6 cut(s)	312, 423, 664, 977, 1288, 1449
BseGI	GGATG	6 cut(s)	21, 239, 514, 561, 973, 1308
BseMI	GCAATG	1 cut(s)	1393
BseNI	ACTGG	2 cut(s)	1106, 1409
BseRI	GAGGAG	1 cut(s)	464
BseSI	GKGCMC	1 cut(s)	660
BseXI	GCAGC	4 cut(s)	49, 77, 174, 263
BsgI	GTGCAG	1 cut(s)	376
Bsh1236I	CGCG	2 cut(s)	225, 1183
BshFI	GGCC	8 cut(s)	179, 298, 311, 342, 363, 531, 792, 1284
BshNI	GGYRCC	1 cut(s)	372
BshTI	ACCGGT	1 cut(s)	118
BshVI	ATCGAT	1 cut(s)	941
BsiHKAI	GWGCWC	4 cut(s)	321, 966, 1008, 1413
BsiHKCI	CYCGRG	1 cut(s)	398
BsiSI	CCGG	5 cut(s)	119, 295, 630, 1288, 1340
BslFI	GGGAC	3 cut(s)	396, 1109, 1305
BsmAI	GTCTC	2 cut(s)	57, 241
BsmFI	GGGAC	3 cut(s)	396, 1109, 1305
BsmI	GAATGC	1 cut(s)	635
BsnI	GGCC	8 cut(s)	179, 298, 311, 342, 363, 531, 792, 1284
BsoBI	CYCGRG	1 cut(s)	398
Bsp1286I	GDGCHC	5 cut(s)	321, 660, 966, 1008, 1413
Bsp143I	GATC	5 cut(s)	724, 909, 981, 1185, 1216
Bsp1720I	GCTNAGC	1 cut(s)	1494
BspACI	CCGC	2 cut(s)	917, 1183
BspANI	GGCC	8 cut(s)	179, 298, 311, 342, 363, 531, 792, 1284
BspDI	ATCGAT	1 cut(s)	941
BspFNI	CGCG	2 cut(s)	225, 1183
BspHI	TCATGA	2 cut(s)	984, 1266
BspLI	GGNNCC	4 cut(s)	193, 364, 374, 953
BspMAI	CTGCAG	1 cut(s)	67
BspOI	GCTAGC	1 cut(s)	294
BspPI	GGATC	3 cut(s)	989, 1193, 1211
BspQI	GCTCTTC	1 cut(s)	996
BspT107I	GGYRCC	1 cut(s)	372
BsrDI	GCAATG	1 cut(s)	1393
BsrFI	RCCGGY	2 cut(s)	118, 294
BsrI	ACTGG	2 cut(s)	1106, 1409
BssAI	RCCGGY	2 cut(s)	118, 294
BssECI	CCNNGG	6 cut(s)	312, 423, 664, 977, 1288, 1449
BssMI	GATC	5 cut(s)	724, 909, 981, 1185, 1216
BssNI	GRCGYC	2 cut(s)	279, 373
BssT1I	CCWWGG	1 cut(s)	977
Bst2UI	CCWGG	4 cut(s)	102, 308, 344, 734
Bst4CI	ACNGT	4 cut(s)	840, 1366, 1470, 1508
Bst6I	CTCTTC	4 cut(s)	35, 996, 1207, 1324
BstACI	GRCGYC	2 cut(s)	279, 373
BstBAI	YACGTR	1 cut(s)	1130
BstC8I	GCNNGC	5 cut(s)	292, 296, 794, 1424, 1491
BstDEI	CTNAG	2 cut(s)	693, 1494
BstEII	GGTNACC	1 cut(s)	128
BstENI	CCTNNNNNAGG	1 cut(s)	536
BstF5I	GGATG	6 cut(s)	21, 239, 514, 561, 973, 1308
BstFNI	CGCG	2 cut(s)	225, 1183
BstH2I	RGCGCY	2 cut(s)	376, 700
BstHHI	GCGC	4 cut(s)	227, 375, 436, 699
BstKTI	GATC	5 cut(s)	727, 912, 984, 1188, 1219
BstMAI	GTCTC	2 cut(s)	57, 241
BstMBI	GATC	5 cut(s)	724, 909, 981, 1185, 1216
BstMWI	GCNNNNNNNGC	7 cut(s)	91, 287, 339, 466, 970, 1354, 1495
BstNI	CCWGG	4 cut(s)	102, 308, 344, 734
BstNSI	RCATGY	2 cut(s)	142, 1447
BstPI	GGTNACC	1 cut(s)	128
BstSCI	CCNGG	6 cut(s)	100, 306, 342, 732, 1287, 1339
BstSFI	CTRYAG	1 cut(s)	63
BstSLI	GKGCMC	1 cut(s)	660
BstUI	CGCG	2 cut(s)	225, 1183
BstV1I	GCAGC	4 cut(s)	49, 77, 174, 263
BstX2I	RGATCY	1 cut(s)	1216
BstYI	RGATCY	1 cut(s)	1216
Bsu15I	ATCGAT	1 cut(s)	941
BsuRI	GGCC	8 cut(s)	179, 298, 311, 342, 363, 531, 792, 1284
BsuTUI	ATCGAT	1 cut(s)	941
BtgZI	GCGATG	2 cut(s)	43, 143
BtrI	CACGTC	1 cut(s)	814
BtsCI	GGATG	6 cut(s)	21, 239, 514, 561, 973, 1308
BtsI	GCAGTG	1 cut(s)	437
BtsIMutI	CAGTG	2 cut(s)	437, 1466
Cac8I	GCNNGC	5 cut(s)	292, 296, 794, 1424, 1491
CciI	TCATGA	2 cut(s)	984, 1266
CfoI	GCGC	4 cut(s)	227, 375, 436, 699
Cfr10I	RCCGGY	2 cut(s)	118, 294
Cfr13I	GGNCC	6 cut(s)	104, 191, 340, 362, 668, 1027
ClaI	ATCGAT	1 cut(s)	941
CseI	GACGC	1 cut(s)	287
Csp6I	GTAC	4 cut(s)	221, 358, 863, 1504
CspAI	ACCGGT	1 cut(s)	118
CspCI	CAANNNNNGTGG	2 cut(s)	925, 960
CviQI	GTAC	4 cut(s)	221, 358, 863, 1504
DdeI	CTNAG	2 cut(s)	693, 1494
DinI	GGCGCC	1 cut(s)	374
DpnI	GATC	5 cut(s)	726, 911, 983, 1187, 1218
DpnII	GATC	5 cut(s)	724, 909, 981, 1185, 1216
EaeI	YGGCCR	2 cut(s)	177, 296
Eam1104I	CTCTTC	4 cut(s)	35, 996, 1207, 1324
EarI	CTCTTC	4 cut(s)	35, 996, 1207, 1324
Ecl136II	GAGCTC	3 cut(s)	964, 1006, 1411
Eco130I	CCWWGG	1 cut(s)	977
Eco147I	AGGCCT	2 cut(s)	311, 1284
Eco24I	GRGCYC	3 cut(s)	966, 1008, 1413
Eco47I	GGWCC	4 cut(s)	104, 191, 668, 1027
Eco47III	AGCGCT	1 cut(s)	698
Eco53kI	GAGCTC	3 cut(s)	964, 1006, 1411
Eco57I	CTGAAG	3 cut(s)	497, 915, 1078
Eco72I	CACGTG	1 cut(s)	1130
Eco88I	CYCGRG	1 cut(s)	398
Eco91I	GGTNACC	1 cut(s)	128
EcoICRI	GAGCTC	3 cut(s)	964, 1006, 1411
EcoNI	CCTNNNNNAGG	1 cut(s)	536
EcoO65I	GGTNACC	1 cut(s)	128
EcoRII	CCWGG	4 cut(s)	100, 306, 342, 732
EcoT14I	CCWWGG	1 cut(s)	977
EcoT38I	GRGCYC	3 cut(s)	966, 1008, 1413
EgeI	GGCGCC	1 cut(s)	374
EheI	GGCGCC	1 cut(s)	374
ErhI	CCWWGG	1 cut(s)	977
FalI	AAGNNNNNCTT	2 cut(s)	1076, 1108
FaqI	GGGAC	3 cut(s)	396, 1109, 1305
FbaI	TGATCA	2 cut(s)	724, 909
FblI	GTMKAC	1 cut(s)	810
Fnu4HI	GCNGC	5 cut(s)	63, 66, 163, 252, 918
FokI	GGATG	6 cut(s)	8, 226, 521, 568, 960, 1295
FriOI	GRGCYC	3 cut(s)	966, 1008, 1413
Fsp4HI	GCNGC	5 cut(s)	63, 66, 163, 252, 918
FspBI	CTAG	9 cut(s)	143, 212, 233, 291, 323, 774, 902, 1121, 1373
GlaI	GCGC	4 cut(s)	226, 374, 435, 698
GluI	GCNGC	5 cut(s)	63, 66, 163, 252, 918
GsuI	CTGGAG	3 cut(s)	507, 755, 1222
HaeII	RGCGCY	2 cut(s)	376, 700
HaeIII	GGCC	8 cut(s)	179, 298, 311, 342, 363, 531, 792, 1284
HapII	CCGG	5 cut(s)	119, 295, 630, 1288, 1340
HgaI	GACGC	1 cut(s)	287
HhaI	GCGC	4 cut(s)	227, 375, 436, 699
Hin1I	GRCGYC	2 cut(s)	279, 373
Hin6I	GCGC	4 cut(s)	225, 373, 434, 697
HinP1I	GCGC	4 cut(s)	225, 373, 434, 697
HincII	GTYRAC	1 cut(s)	627
HindII	GTYRAC	1 cut(s)	627
HinfI	GANTC	5 cut(s)	4, 303, 991, 1043, 1133
HpaII	CCGG	5 cut(s)	119, 295, 630, 1288, 1340
HphI	GGTGA	3 cut(s)	122, 509, 1093
Hpy166II	GTNNAC	4 cut(s)	627, 811, 865, 1195
Hpy188I	TCNGA	5 cut(s)	316, 1048, 1097, 1234, 1450
Hpy188III	TCNNGA	7 cut(s)	611, 872, 967, 985, 1201, 1256, 1267
Hpy8I	GTNNAC	4 cut(s)	627, 811, 865, 1195
HpyAV	CCTTC	8 cut(s)	18, 35, 79, 143, 438, 592, 670, 1078
HpyCH4III	ACNGT	4 cut(s)	840, 1366, 1470, 1508
HpyCH4IV	ACGT	5 cut(s)	548, 620, 813, 1129, 1502
HpyCH4V	TGCA	5 cut(s)	65, 393, 1112, 1348, 1393
HpyF10VI	GCNNNNNNNGC	7 cut(s)	91, 287, 339, 466, 970, 1354, 1495
HpyF3I	CTNAG	2 cut(s)	693, 1494
HpySE526I	ACGT	5 cut(s)	548, 620, 813, 1129, 1502
Hsp92I	GRCGYC	2 cut(s)	279, 373
HspAI	GCGC	4 cut(s)	225, 373, 434, 697
KasI	GGCGCC	1 cut(s)	372
KroI	GCCGGC	1 cut(s)	294
KroNI	GCCGGC	1 cut(s)	296
Ksp22I	TGATCA	2 cut(s)	724, 909
Kzo9I	GATC	5 cut(s)	724, 909, 981, 1185, 1216
LguI	GCTCTTC	1 cut(s)	996
LmnI	GCTCC	6 cut(s)	316, 632, 951, 1011, 1408, 1416
Lsp1109I	GCAGC	4 cut(s)	49, 77, 174, 263
LweI	GCATC	1 cut(s)	982
MaeI	CTAG	9 cut(s)	143, 212, 233, 291, 323, 774, 902, 1121, 1373
MaeII	ACGT	5 cut(s)	548, 620, 813, 1129, 1502
MaeIII	GTNAC	3 cut(s)	128, 511, 816
MalI	GATC	5 cut(s)	726, 911, 983, 1187, 1218
MboI	GATC	5 cut(s)	724, 909, 981, 1185, 1216
MboII	GAAGA	9 cut(s)	22, 25, 490, 751, 1000, 1013, 1052, 1224, 1341
MfeI	CAATTG	1 cut(s)	1152
MflI	RGATCY	1 cut(s)	1216
MhlI	GDGCHC	5 cut(s)	321, 660, 966, 1008, 1413
MlsI	TGGCCA	1 cut(s)	179
MluCI	AATT	4 cut(s)	283, 1152, 1247, 1349
MluNI	TGGCCA	1 cut(s)	179
Mly113I	GGCGCC	1 cut(s)	373
MlyI	GAGTC	2 cut(s)	13, 312
MmeI	TCCRAC	3 cut(s)	193, 761, 1212
Mox20I	TGGCCA	1 cut(s)	179
MroNI	GCCGGC	1 cut(s)	294
MroXI	GAANNNNTTC	1 cut(s)	1251
MscI	TGGCCA	1 cut(s)	179
MseI	TTAA	4 cut(s)	534, 701, 827, 1401
Msp20I	TGGCCA	1 cut(s)	179
MspA1I	CMGCKG	1 cut(s)	1387
MspI	CCGG	5 cut(s)	119, 295, 630, 1288, 1340
MspR9I	CCNGG	6 cut(s)	102, 308, 344, 734, 1289, 1341
MunI	CAATTG	1 cut(s)	1152
Mva1269I	GAATGC	1 cut(s)	635
MvaI	CCWGG	4 cut(s)	102, 308, 344, 734
MvnI	CGCG	2 cut(s)	225, 1183
MwoI	GCNNNNNNNGC	7 cut(s)	91, 287, 339, 466, 970, 1354, 1495
NaeI	GCCGGC	1 cut(s)	296
NarI	GGCGCC	1 cut(s)	373
NciI	CCSGG	2 cut(s)	1289, 1341
NdeII	GATC	5 cut(s)	724, 909, 981, 1185, 1216
NgoMIV	GCCGGC	1 cut(s)	294
NheI	GCTAGC	1 cut(s)	290
NlaIV	GGNNCC	4 cut(s)	193, 364, 374, 953
NmeAIII	GCCGAG	2 cut(s)	379, 985
NmuCI	GTSAC	1 cut(s)	128
NspI	RCATGY	2 cut(s)	142, 1447
PaeR7I	CTCGAG	1 cut(s)	398
PagI	TCATGA	2 cut(s)	984, 1266
PceI	AGGCCT	2 cut(s)	311, 1284
PciI	ACATGT	1 cut(s)	1443
PciSI	GCTCTTC	1 cut(s)	996
PctI	GAATGC	1 cut(s)	635
PdiI	GCCGGC	1 cut(s)	296
PdmI	GAANNNNTTC	1 cut(s)	1251
PfeI	GAWTC	3 cut(s)	991, 1043, 1133
PflMI	CCANNNNNTGG	2 cut(s)	175, 1015
PfoI	TCCNGGA	2 cut(s)	100, 732
PinAI	ACCGGT	1 cut(s)	118
PkrI	GCNGC	5 cut(s)	64, 67, 164, 253, 919
PleI	GAGTC	2 cut(s)	12, 311
PluTI	GGCGCC	1 cut(s)	376
PmaCI	CACGTG	1 cut(s)	1130
PmlI	CACGTG	1 cut(s)	1130
PpsI	GAGTC	2 cut(s)	12, 311
Ppu21I	YACGTR	1 cut(s)	1130
PscI	ACATGT	1 cut(s)	1443
Psp124BI	GAGCTC	3 cut(s)	966, 1008, 1413
Psp6I	CCWGG	4 cut(s)	100, 306, 342, 732
PspCI	CACGTG	1 cut(s)	1130
PspEI	GGTNACC	1 cut(s)	128
PspGI	CCWGG	4 cut(s)	100, 306, 342, 732
PspN4I	GGNNCC	4 cut(s)	193, 364, 374, 953
PspPI	GGNCC	6 cut(s)	104, 191, 340, 362, 668, 1027
PspXI	VCTCGAGB	1 cut(s)	398
PstI	CTGCAG	1 cut(s)	67
PsuI	RGATCY	1 cut(s)	1216
PvuII	CAGCTG	1 cut(s)	1387
RsaI	GTAC	4 cut(s)	222, 359, 864, 1505
RsaNI	GTAC	4 cut(s)	221, 358, 863, 1504
SacI	GAGCTC	3 cut(s)	966, 1008, 1413
SapI	GCTCTTC	1 cut(s)	996
SaqAI	TTAA	4 cut(s)	534, 701, 827, 1401
SatI	GCNGC	5 cut(s)	63, 66, 163, 252, 918
Sau3AI	GATC	5 cut(s)	724, 909, 981, 1185, 1216
Sau96I	GGNCC	6 cut(s)	104, 191, 340, 362, 668, 1027
SchI	GAGTC	2 cut(s)	13, 312
ScrFI	CCNGG	6 cut(s)	102, 308, 344, 734, 1289, 1341
SduI	GDGCHC	5 cut(s)	321, 660, 966, 1008, 1413
SfaNI	GCATC	1 cut(s)	982
SfcI	CTRYAG	1 cut(s)	63
SfoI	GGCGCC	1 cut(s)	374
Sfr274I	CTCGAG	1 cut(s)	398
SinI	GGWCC	4 cut(s)	104, 191, 668, 1027
SlaI	CTCGAG	1 cut(s)	398
SmlI	CTYRAG	3 cut(s)	398, 967, 1069
SmoI	CTYRAG	3 cut(s)	398, 967, 1069
SpeI	ACTAGT	2 cut(s)	232, 1120
Sse9I	AATT	4 cut(s)	283, 1152, 1247, 1349
SseBI	AGGCCT	2 cut(s)	311, 1284
SsiI	CCGC	2 cut(s)	917, 1183
SspDI	GGCGCC	1 cut(s)	372
SspMI	CTAG	9 cut(s)	143, 212, 233, 291, 323, 774, 902, 1121, 1373
SstI	GAGCTC	3 cut(s)	966, 1008, 1413
StuI	AGGCCT	2 cut(s)	311, 1284
StyD4I	CCNGG	6 cut(s)	100, 306, 342, 732, 1287, 1339
StyI	CCWWGG	1 cut(s)	977
TaaI	ACNGT	4 cut(s)	840, 1366, 1470, 1508
TaiI	ACGT	5 cut(s)	551, 623, 816, 1132, 1505
TaqI	TCGA	4 cut(s)	399, 416, 941, 1140
TaqII	GACCGA	2 cut(s)	656, 1044
TasI	AATT	4 cut(s)	283, 1152, 1247, 1349
TatI	WGTACW	1 cut(s)	862
TauI	GCSGC	1 cut(s)	920
TfiI	GAWTC	3 cut(s)	991, 1043, 1133
Tru1I	TTAA	4 cut(s)	534, 701, 827, 1401
Tru9I	TTAA	4 cut(s)	534, 701, 827, 1401
TscAI	CASTG	2 cut(s)	444, 1473
TseFI	GTSAC	1 cut(s)	128
TseI	GCWGC	4 cut(s)	62, 65, 162, 251
Tsp45I	GTSAC	1 cut(s)	128
TspDTI	ATGAA	5 cut(s)	771, 845, 1001, 1255, 1283
TspRI	CASTG	2 cut(s)	444, 1473
Van91I	CCANNNNNTGG	2 cut(s)	175, 1015
VpaK11BI	GGWCC	4 cut(s)	104, 191, 668, 1027
XagI	CCTNNNNNAGG	1 cut(s)	536
XapI	RAATTY	1 cut(s)	1247
XceI	RCATGY	2 cut(s)	142, 1447
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1016
XhoI	CTCGAG	1 cut(s)	398
XmiI	GTMKAC	1 cut(s)	810
XmnI	GAANNNNTTC	1 cut(s)	1251
XspI	CTAG	9 cut(s)	143, 212, 233, 291, 323, 774, 902, 1121, 1373

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.