Rmu_co8014370.1_g000001

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8014370.1
Physical Location & Seq
Reverse (-)
2 .. 504
503 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8014370.1_g000001.1.cds

Sequence Viewer

Length: 503 bp
atgaagaatctccaagaagagatccaaagtgtggttggtatggaccgaatggtggaagaatctgatttgcccaagctggattacttgagtatggtggtaaaggagagcttcagactacacccagttgtaccgttactagtcccacatgaatccatcgaggacattaccatcgatggatatgacatacccaagaagtcgcggatcatagtaaacatctggagcattggaagagatcctaatgtttggtcagaaaatgttgaggagttttatcctgaaaggttcatgaacaacaatatagacctccggggacataactttcagctcatcccatttgggtctgggcgaagagggtgtccgggtatgcaattagggctaaccacagttcggctagttctggcacagctggttcattgctttaactgggagctcccaaatggcttgctacctcaagacttggacatgtccgaggatttcggcttatcactgtcaaaagccaaacactt

Protein Analysis

167

Amino Acids

19.15

Weight (kDa)

5.06

Isoelectric Point (pI)

57.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000282)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 31
AccII CGCG 1 cut(s) 199
AciI CCGC 1 cut(s) 199
AclWI GGATC 3 cut(s) 16, 209, 227
AcuI CTGAAG 1 cut(s) 94
AfaI GTAC 1 cut(s) 129
AfiI CCNNNNNNNGG 3 cut(s) 31, 52, 384
AflIII ACRYGT 1 cut(s) 459
AhlI ACTAGT 1 cut(s) 136
AluBI AGCT 5 cut(s) 76, 108, 322, 403, 427
AluI AGCT 5 cut(s) 76, 108, 322, 403, 427
Alw21I GWGCWC 1 cut(s) 429
AlwI GGATC 3 cut(s) 16, 209, 227
ArsI GACNNNNNNTTYG 2 cut(s) 337, 369
AspS9I GGNCC 1 cut(s) 43
AsuC2I CCSGG 2 cut(s) 305, 357
AvaII GGWCC 1 cut(s) 43
BanII GRGCYC 1 cut(s) 429
Bbv12I GWGCWC 1 cut(s) 429
BccI CCATC 3 cut(s) 161, 167, 176
BcnI CCSGG 2 cut(s) 305, 357
BcuI ACTAGT 1 cut(s) 136
BfaI CTAG 2 cut(s) 137, 389
Bme1390I CCNGG 2 cut(s) 305, 357
Bme18I GGWCC 1 cut(s) 43
BmgT120I GGNCC 1 cut(s) 43
BmrFI CCNGG 2 cut(s) 305, 357
BmrI ACTGGG 2 cut(s) 116, 430
BmuI ACTGGG 2 cut(s) 116, 430
BpmI CTGGAG 1 cut(s) 238
BpuEI CTTGAG 2 cut(s) 106, 432
BpuMI CCSGG 2 cut(s) 305, 357
Bsa29I ATCGAT 1 cut(s) 171
BsaJI CCNNGG 2 cut(s) 304, 465
Bsc4I CCNNNNNNNGG 3 cut(s) 31, 52, 384
Bse1I ACTGG 2 cut(s) 122, 425
Bse3DI GCAATG 1 cut(s) 409
BseCI ATCGAT 1 cut(s) 171
BseDI CCNNGG 2 cut(s) 304, 465
BseGI GGATG 1 cut(s) 324
BseLI CCNNNNNNNGG 3 cut(s) 31, 52, 384
BseMI GCAATG 1 cut(s) 409
BseNI ACTGG 2 cut(s) 122, 425
BseRI GAGGAG 1 cut(s) 275
Bsh1236I CGCG 1 cut(s) 199
BshVI ATCGAT 1 cut(s) 171
BsiHKAI GWGCWC 1 cut(s) 429
BsiSI CCGG 2 cut(s) 304, 356
BslFI GGGAC 2 cut(s) 125, 321
BslI CCNNNNNNNGG 3 cut(s) 31, 52, 384
BsmFI GGGAC 2 cut(s) 125, 321
Bsp1286I GDGCHC 1 cut(s) 429
Bsp143I GATC 3 cut(s) 21, 201, 232
BspACI CCGC 1 cut(s) 199
BspDI ATCGAT 1 cut(s) 171
BspFNI CGCG 1 cut(s) 199
BspHI TCATGA 1 cut(s) 282
BspPI GGATC 3 cut(s) 16, 209, 227
BsrDI GCAATG 1 cut(s) 409
BsrI ACTGG 2 cut(s) 122, 425
BssECI CCNNGG 2 cut(s) 304, 465
BssMI GATC 3 cut(s) 21, 201, 232
Bst4CI ACNGT 3 cut(s) 132, 382, 486
Bst6I CTCTTC 3 cut(s) 12, 223, 340
BstC8I GCNNGC 1 cut(s) 440
BstF5I GGATG 1 cut(s) 324
BstFNI CGCG 1 cut(s) 199
BstKTI GATC 3 cut(s) 24, 204, 235
BstMBI GATC 3 cut(s) 21, 201, 232
BstMWI GCNNNNNNNGC 1 cut(s) 370
BstNSI RCATGY 1 cut(s) 463
BstSCI CCNGG 2 cut(s) 303, 355
BstUI CGCG 1 cut(s) 199
BstX2I RGATCY 2 cut(s) 21, 232
BstYI RGATCY 2 cut(s) 21, 232
Bsu15I ATCGAT 1 cut(s) 171
BsuTUI ATCGAT 1 cut(s) 171
BtsCI GGATG 1 cut(s) 324
BtsIMutI CAGTG 1 cut(s) 482
Cac8I GCNNGC 1 cut(s) 440
CciI TCATGA 1 cut(s) 282
Cfr13I GGNCC 1 cut(s) 43
ClaI ATCGAT 1 cut(s) 171
Csp6I GTAC 1 cut(s) 128
CviAII CATG 3 cut(s) 146, 283, 460
CviQI GTAC 1 cut(s) 128
DpnI GATC 3 cut(s) 23, 203, 234
DpnII GATC 3 cut(s) 21, 201, 232
Eam1104I CTCTTC 3 cut(s) 12, 223, 340
EarI CTCTTC 3 cut(s) 12, 223, 340
Ecl136II GAGCTC 1 cut(s) 427
Eco24I GRGCYC 1 cut(s) 429
Eco47I GGWCC 1 cut(s) 43
Eco53kI GAGCTC 1 cut(s) 427
Eco57I CTGAAG 1 cut(s) 94
EcoICRI GAGCTC 1 cut(s) 427
EcoT38I GRGCYC 1 cut(s) 429
FaeI CATG 3 cut(s) 149, 286, 463
FalI AAGNNNNNCTT 2 cut(s) 92, 124
FaqI GGGAC 2 cut(s) 125, 321
FatI CATG 3 cut(s) 145, 282, 459
FokI GGATG 1 cut(s) 311
FriOI GRGCYC 1 cut(s) 429
FspBI CTAG 2 cut(s) 137, 389
GsuI CTGGAG 1 cut(s) 238
HapII CCGG 2 cut(s) 304, 356
Hin1II CATG 3 cut(s) 149, 286, 463
HinfI GANTC 3 cut(s) 7, 59, 149
HpaII CCGG 2 cut(s) 304, 356
Hpy166II GTNNAC 1 cut(s) 211
Hpy188I TCNGA 4 cut(s) 64, 113, 250, 466
Hpy188III TCNNGA 4 cut(s) 217, 272, 283, 449
Hpy8I GTNNAC 1 cut(s) 211
HpyCH4III ACNGT 3 cut(s) 132, 382, 486
HpyCH4V TGCA 1 cut(s) 364
HpyF10VI GCNNNNNNNGC 1 cut(s) 370
Hsp92II CATG 3 cut(s) 149, 286, 463
Kzo9I GATC 3 cut(s) 21, 201, 232
LmnI GCTCC 3 cut(s) 219, 424, 432
MaeI CTAG 2 cut(s) 137, 389
MaeIII GTNAC 1 cut(s) 132
MalI GATC 3 cut(s) 23, 203, 234
MboI GATC 3 cut(s) 21, 201, 232
MboII GAAGA 5 cut(s) 16, 29, 68, 240, 357
MflI RGATCY 2 cut(s) 21, 232
MhlI GDGCHC 1 cut(s) 429
MluCI AATT 1 cut(s) 365
MnlI CCTC 6 cut(s) 151, 253, 311, 341, 456, 460
MseI TTAA 1 cut(s) 417
MspA1I CMGCKG 1 cut(s) 403
MspI CCGG 2 cut(s) 304, 356
MspR9I CCNGG 2 cut(s) 305, 357
MvnI CGCG 1 cut(s) 199
MwoI GCNNNNNNNGC 1 cut(s) 370
NciI CCSGG 2 cut(s) 305, 357
NdeII GATC 3 cut(s) 21, 201, 232
NlaIII CATG 3 cut(s) 149, 286, 463
NspI RCATGY 1 cut(s) 463
PagI TCATGA 1 cut(s) 282
PciI ACATGT 1 cut(s) 459
PfeI GAWTC 3 cut(s) 7, 59, 149
PflMI CCANNNNNTGG 1 cut(s) 31
PscI ACATGT 1 cut(s) 459
Psp124BI GAGCTC 1 cut(s) 429
PspPI GGNCC 1 cut(s) 43
PsuI RGATCY 2 cut(s) 21, 232
PvuII CAGCTG 1 cut(s) 403
RsaI GTAC 1 cut(s) 129
RsaNI GTAC 1 cut(s) 128
SacI GAGCTC 1 cut(s) 429
SaqAI TTAA 1 cut(s) 417
Sau3AI GATC 3 cut(s) 21, 201, 232
Sau96I GGNCC 1 cut(s) 43
ScrFI CCNGG 2 cut(s) 305, 357
SduI GDGCHC 1 cut(s) 429
SetI ASST 8 cut(s) 78, 110, 281, 303, 324, 405, 429, 448
SinI GGWCC 1 cut(s) 43
SmlI CTYRAG 2 cut(s) 85, 447
SmoI CTYRAG 2 cut(s) 85, 447
SpeI ACTAGT 1 cut(s) 136
Sse9I AATT 1 cut(s) 365
SsiI CCGC 1 cut(s) 199
SspMI CTAG 2 cut(s) 137, 389
SstI GAGCTC 1 cut(s) 429
StyD4I CCNGG 2 cut(s) 303, 355
TaaI ACNGT 3 cut(s) 132, 382, 486
TaqI TCGA 2 cut(s) 156, 171
TaqII GACCGA 1 cut(s) 60
TasI AATT 1 cut(s) 365
TfiI GAWTC 3 cut(s) 7, 59, 149
Tru1I TTAA 1 cut(s) 417
Tru9I TTAA 1 cut(s) 417
TscAI CASTG 1 cut(s) 489
TspDTI ATGAA 5 cut(s) 17, 162, 271, 299, 398
TspRI CASTG 1 cut(s) 489
Van91I CCANNNNNTGG 1 cut(s) 31
VpaK11BI GGWCC 1 cut(s) 43
XceI RCATGY 1 cut(s) 463
XcmI CCANNNNNNNNNTGG 1 cut(s) 32
XspI CTAG 2 cut(s) 137, 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.