Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0000282

Physical Location & Seq

Genomic Coordinates Reverse (-)

5471698 .. 5482648

Gene Structure 10951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG076600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGCCTCAGAAAAGCACGCAGAATCTAACTGCAGATACATGCACTGATACACGTTTATTAATCTATAAATATCTATCTAGTTTCACATGTTTTCCAAAAGAAAAAATCTATCTAGTTTCAACAGACACAATGAGTCCTTCAACAATTACCATCCTTCTCCTCTTCGTTGCCCTCATCTGGTTTCTCATCGCTGCAGCCTTCTCAAAACCAAAGCACAAGAAGCTACCTCCTGGACCTTTGGCACTACCGGTCATTGGTCACCTTCATATGCTAGGCAATCTCCCACATCGCAGCCTCCAACACTTGGCCAAAAAATATGGACCCATAATGTCTATTCGCCTTGGGAATGTACCCACCATACTAATCTCGTCCCCGAAAGCTGCAGAGCTATTCCTCAAAACTCATGACGCCAATTTCGCGAGCAGGCCGACAGTCCAGGCCGCAGAGCACCTAGCTTACGGCACAATGGGCCTGGCGTTTGCCAAGTACGGCCCCTATTGGCGCCATGTGAGGAAGCTCTGTACCCTCGAGCTTCTTTGTCCCTCGAAAGCGGAGGCTTTTGCGCCGCTGCGAAGGGAGGAGATAGAACTGTTGGTGCAGTCGCTGAAGAAAGCTGGAGAGGGAGGTGAGGTGGTGGATGTTAGTGACAAGATTTATGGCGTTGGTGAGGATATAACGTATAGGATGATATTGGGTTGCACAAAGGATGATGCTAGGTTTGGTTTGAAGGAGATTGTTCACCAAGTTTCGTTGTTAACCGGGGCATTTAACGTAGCTGATTTTGTGCCCTTCCTCGGTCCATTTGATTTTCAGGCCCAAAATCCAAGCCTCAGAGTACCTGTCCTACGGCACAAAGGGCATGGCCTATTCCCAATACGGTCCCTATTGGCACCATATGAGGAAGCTCTGCATGCTTCATCTCTTCTGTCTAGCAAAAATGGAAGCTTTCACGCCGCTGCCAAAGGAGAAACTGGGAGTGCTGGTAAGAAAGCTGAAGAGAGCTGCAGAGGAAGGTGGATCGTGGATATTAGTGAGACGATTGGTGTGATGAATGAGGACATAACGTATAGGATGGTGTTCGGTTGTCAAAAGGATGATAGGTTTAATTTGAAAGCCATTGTTGAGGAAACGCTTTTCTTGACTGGGGCTTTCAATATATCAGATTTTGTTCGTTCCCTTGCTGCACTTGATATTCAGTACAAGGCAAAGAACCTTGCCACTGCAACTAAGTTTGCCAGACGACTATTGGAGACGAACCCCACAGTTGAGAGTCAGACAAAGTTACCCATGCAAGTGCAGGCGGCAGAGAAGAATATGACTGATGCTTCTCAACTGAACTATGACTTCAGAAATCCATTTGTGGTGGGGGCAACAAATGTACCAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0055114 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

462

Amino Acids

51.1

Weight (kDa)

9.1

Isoelectric Point (pI)

38.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	76 - 267	7e-24	Cytochrome P450
COPI_C	PF06957	394 - 462	4.1e-18	Coatomer (COPI) alpha subunit C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000282)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica	MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica	Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis	pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis	RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata	RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora	Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa	Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha	Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana	Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	501, 889
AccB7I	CCANNNNNTGG	1 cut(s)	304
AccII	CGCG	1 cut(s)	419
AciI	CCGC	5 cut(s)	441, 551, 566, 954, 1301
AclWI	GGATC	1 cut(s)	1025
AcoI	YGGCCR	1 cut(s)	306
AcuI	CTGAAG	3 cut(s)	626, 1014, 1330
AcyI	GRCGYC	2 cut(s)	408, 502
AfaI	GTAC	6 cut(s)	351, 488, 523, 837, 1199, 1380
AfiI	CCNNNNNNNGG	4 cut(s)	177, 254, 304, 794
AflIII	ACRYGT	2 cut(s)	50, 86
AgeI	ACCGGT	1 cut(s)	247
AgsI	TTSAA	5 cut(s)	120, 141, 727, 1111, 1153
AjnI	CCWGG	3 cut(s)	229, 435, 471
Alw21I	GWGCWC	1 cut(s)	450
Alw26I	GTCTC	2 cut(s)	1028, 1244
AlwI	GGATC	1 cut(s)	1025
AlwNI	CAGNNNCTG	1 cut(s)	604
Ama87I	CYCGRG	1 cut(s)	527
AoxI	GGCC	7 cut(s)	306, 425, 438, 469, 490, 813, 862
ApeKI	GCWGC	8 cut(s)	191, 194, 291, 380, 568, 956, 1002, 1181
ArsI	GACNNNNNNTTYG	2 cut(s)	398, 430
AseI	ATTAAT	1 cut(s)	59
AsiGI	ACCGGT	1 cut(s)	247
AspLEI	GCGC	2 cut(s)	504, 565
AspS9I	GGNCC	7 cut(s)	233, 320, 469, 491, 797, 814, 879
AsuC2I	CCSGG	1 cut(s)	760
AsuHPI	GGTGA	4 cut(s)	251, 638, 677, 731
AvaI	CYCGRG	1 cut(s)	527
AvaII	GGWCC	4 cut(s)	233, 320, 797, 879
BaeGI	GKGCMC	1 cut(s)	789
BaeI	ACNNNNGTAYC	1 cut(s)	1362
BalI	TGGCCA	1 cut(s)	308
BanI	GGYRCC	2 cut(s)	501, 889
Bbv12I	GWGCWC	1 cut(s)	450
BbvI	GCAGC	8 cut(s)	178, 206, 303, 367, 555, 943, 989, 1168
BccI	CCATC	2 cut(s)	158, 1066
BceAI	ACGGC	3 cut(s)	475, 505, 863
BciT130I	CCWGG	3 cut(s)	231, 437, 473
BcnI	CCSGG	1 cut(s)	760
BcoDI	GTCTC	2 cut(s)	1028, 1244
BfaI	CTAG	6 cut(s)	78, 113, 272, 452, 714, 930
BfmI	CTRYAG	4 cut(s)	30, 192, 381, 1003
BfoI	RGCGCY	1 cut(s)	505
Bme1390I	CCNGG	4 cut(s)	231, 437, 473, 760
Bme18I	GGWCC	4 cut(s)	233, 320, 797, 879
BmeT110I	CYCGRG	1 cut(s)	527
BmgT120I	GGNCC	7 cut(s)	233, 320, 469, 491, 797, 814, 879
BmiI	GGNNCC	5 cut(s)	322, 493, 503, 881, 891
BmrFI	CCNGG	4 cut(s)	231, 437, 473, 760
BmrI	ACTGGG	2 cut(s)	981, 1152
BmsI	GCATC	2 cut(s)	700, 1312
BmuI	ACTGGG	2 cut(s)	981, 1152
BpmI	CTGGAG	1 cut(s)	636
BpuMI	CCSGG	1 cut(s)	760
BsaHI	GRCGYC	2 cut(s)	408, 502
BsaJI	CCNNGG	3 cut(s)	340, 759, 793
BsaWI	WCCGGW	1 cut(s)	247
BsaXI	ACNNNNNCTCC	4 cut(s)	615, 645, 967, 997
Bsc4I	CCNNNNNNNGG	4 cut(s)	177, 254, 304, 794
Bse118I	RCCGGY	1 cut(s)	247
Bse1I	ACTGG	2 cut(s)	976, 1147
BseBI	CCWGG	3 cut(s)	231, 437, 473
BseDI	CCNNGG	3 cut(s)	340, 759, 793
BseGI	GGATG	6 cut(s)	150, 643, 690, 712, 1077, 1099
BseLI	CCNNNNNNNGG	4 cut(s)	177, 254, 304, 794
BseMII	CTCAG	2 cut(s)	20, 844
BseNI	ACTGG	2 cut(s)	976, 1147
BseRI	GAGGAG	2 cut(s)	149, 593
BseSI	GKGCMC	1 cut(s)	789
BseXI	GCAGC	8 cut(s)	178, 206, 303, 367, 555, 943, 989, 1168
BsgI	GTGCAG	3 cut(s)	617, 1167, 1316
Bsh1236I	CGCG	1 cut(s)	419
BshFI	GGCC	7 cut(s)	308, 427, 440, 471, 492, 815, 864
BshNI	GGYRCC	2 cut(s)	501, 889
BshTI	ACCGGT	1 cut(s)	247
BsiHKAI	GWGCWC	1 cut(s)	450
BsiHKCI	CYCGRG	1 cut(s)	527
BsiSI	CCGG	2 cut(s)	248, 759
BslFI	GGGAC	3 cut(s)	355, 525, 865
BslI	CCNNNNNNNGG	4 cut(s)	177, 254, 304, 794
BsmAI	GTCTC	2 cut(s)	1028, 1244
BsmBI	CGTCTC	2 cut(s)	1028, 1244
BsmFI	GGGAC	3 cut(s)	355, 525, 865
BsnI	GGCC	7 cut(s)	308, 427, 440, 471, 492, 815, 864
BsoBI	CYCGRG	1 cut(s)	527
Bsp1286I	GDGCHC	2 cut(s)	450, 789
Bsp143I	GATC	1 cut(s)	1017
Bsp68I	TCGCGA	1 cut(s)	419
BspACI	CCGC	5 cut(s)	441, 551, 566, 954, 1301
BspANI	GGCC	7 cut(s)	308, 427, 440, 471, 492, 815, 864
BspCNI	CTCAG	2 cut(s)	19, 843
BspFNI	CGCG	1 cut(s)	419
BspHI	TCATGA	1 cut(s)	403
BspLI	GGNNCC	5 cut(s)	322, 493, 503, 881, 891
BspMAI	CTGCAG	4 cut(s)	34, 196, 385, 1007
BspPI	GGATC	1 cut(s)	1025
BspT107I	GGYRCC	2 cut(s)	501, 889
BsrFI	RCCGGY	1 cut(s)	247
BsrI	ACTGG	2 cut(s)	976, 1147
BssAI	RCCGGY	1 cut(s)	247
BssECI	CCNNGG	3 cut(s)	340, 759, 793
BssMI	GATC	1 cut(s)	1017
BssNI	GRCGYC	2 cut(s)	408, 502
BssT1I	CCWWGG	1 cut(s)	340
Bst2UI	CCWGG	3 cut(s)	231, 437, 473
Bst4CI	ACNGT	4 cut(s)	433, 591, 879, 1264
Bst6I	CTCTTC	3 cut(s)	167, 927, 990
BstACI	GRCGYC	2 cut(s)	408, 502
BstC8I	GCNNGC	5 cut(s)	17, 421, 425, 912, 1299
BstDEI	CTNAG	3 cut(s)	6, 830, 1227
BstEII	GGTNACC	1 cut(s)	257
BstF5I	GGATG	6 cut(s)	150, 643, 690, 712, 1077, 1099
BstFNI	CGCG	1 cut(s)	419
BstH2I	RGCGCY	1 cut(s)	505
BstHHI	GCGC	2 cut(s)	504, 565
BstKTI	GATC	1 cut(s)	1020
BstMAI	GTCTC	2 cut(s)	1028, 1244
BstMBI	GATC	1 cut(s)	1017
BstMWI	GCNNNNNNNGC	5 cut(s)	220, 416, 468, 856, 911
BstNI	CCWGG	3 cut(s)	231, 437, 473
BstNSI	RCATGY	3 cut(s)	42, 90, 914
BstPI	GGTNACC	1 cut(s)	257
BstSCI	CCNGG	4 cut(s)	229, 435, 471, 758
BstSFI	CTRYAG	4 cut(s)	30, 192, 381, 1003
BstSLI	GKGCMC	1 cut(s)	789
BstUI	CGCG	1 cut(s)	419
BstV1I	GCAGC	8 cut(s)	178, 206, 303, 367, 555, 943, 989, 1168
BsuRI	GGCC	7 cut(s)	308, 427, 440, 471, 492, 815, 864
BtgZI	GCGATG	2 cut(s)	172, 272
BtsCI	GGATG	6 cut(s)	150, 643, 690, 712, 1077, 1099
BtsI	GCAGTG	1 cut(s)	1218
BtsIMutI	CAGTG	2 cut(s)	42, 1218
BtuMI	TCGCGA	1 cut(s)	419
Cac8I	GCNNGC	5 cut(s)	17, 421, 425, 912, 1299
CaiI	CAGNNNCTG	1 cut(s)	604
CciI	TCATGA	1 cut(s)	403
CfoI	GCGC	2 cut(s)	504, 565
Cfr10I	RCCGGY	1 cut(s)	247
Cfr13I	GGNCC	7 cut(s)	233, 320, 469, 491, 797, 814, 879
CseI	GACGC	1 cut(s)	416
Csp6I	GTAC	6 cut(s)	350, 487, 522, 836, 1198, 1379
CspAI	ACCGGT	1 cut(s)	247
CviAII	CATG	7 cut(s)	39, 87, 404, 506, 860, 911, 1288
CviQI	GTAC	6 cut(s)	350, 487, 522, 836, 1198, 1379
DdeI	CTNAG	3 cut(s)	6, 830, 1227
DinI	GGCGCC	1 cut(s)	503
DpnI	GATC	1 cut(s)	1019
DpnII	GATC	1 cut(s)	1017
EaeI	YGGCCR	1 cut(s)	306
Eam1104I	CTCTTC	3 cut(s)	167, 927, 990
EarI	CTCTTC	3 cut(s)	167, 927, 990
Eco130I	CCWWGG	1 cut(s)	340
Eco47I	GGWCC	4 cut(s)	233, 320, 797, 879
Eco57I	CTGAAG	3 cut(s)	626, 1014, 1330
Eco88I	CYCGRG	1 cut(s)	527
Eco91I	GGTNACC	1 cut(s)	257
EcoO65I	GGTNACC	1 cut(s)	257
EcoRII	CCWGG	3 cut(s)	229, 435, 471
EcoT14I	CCWWGG	1 cut(s)	340
EgeI	GGCGCC	1 cut(s)	503
EheI	GGCGCC	1 cut(s)	503
ErhI	CCWWGG	1 cut(s)	340
Esp3I	CGTCTC	2 cut(s)	1028, 1244
FaeI	CATG	7 cut(s)	42, 90, 407, 509, 863, 914, 1291
FaqI	GGGAC	3 cut(s)	355, 525, 865
FatI	CATG	7 cut(s)	38, 86, 403, 505, 859, 910, 1287
FauNDI	CATATG	2 cut(s)	267, 895
FokI	GGATG	6 cut(s)	137, 650, 697, 719, 1084, 1106
FspBI	CTAG	6 cut(s)	78, 113, 272, 452, 714, 930
GlaI	GCGC	2 cut(s)	503, 564
GsuI	CTGGAG	1 cut(s)	636
HaeII	RGCGCY	1 cut(s)	505
HaeIII	GGCC	7 cut(s)	308, 427, 440, 471, 492, 815, 864
HapII	CCGG	2 cut(s)	248, 759
HgaI	GACGC	1 cut(s)	416
HhaI	GCGC	2 cut(s)	504, 565
Hin1I	GRCGYC	2 cut(s)	408, 502
Hin1II	CATG	7 cut(s)	42, 90, 407, 509, 863, 914, 1291
Hin6I	GCGC	2 cut(s)	502, 563
HinP1I	GCGC	2 cut(s)	502, 563
HincII	GTYRAC	1 cut(s)	756
HindII	GTYRAC	1 cut(s)	756
HindIII	AAGCTT	1 cut(s)	943
HinfI	GANTC	3 cut(s)	22, 133, 1270
HpaI	GTTAAC	1 cut(s)	756
HpaII	CCGG	2 cut(s)	248, 759
HphI	GGTGA	4 cut(s)	251, 638, 677, 731
Hpy166II	GTNNAC	2 cut(s)	739, 756
Hpy188I	TCNGA	5 cut(s)	9, 833, 1162, 1275, 1349
Hpy188III	TCNNGA	3 cut(s)	404, 418, 1138
Hpy8I	GTNNAC	2 cut(s)	739, 756
HpyAV	CCTTC	8 cut(s)	147, 164, 208, 272, 567, 721, 799, 1005
HpyCH4III	ACNGT	4 cut(s)	433, 591, 879, 1264
HpyCH4IV	ACGT	4 cut(s)	52, 677, 771, 1064
HpyF10VI	GCNNNNNNNGC	5 cut(s)	220, 416, 468, 856, 911
HpyF3I	CTNAG	3 cut(s)	6, 830, 1227
HpySE526I	ACGT	4 cut(s)	52, 677, 771, 1064
Hsp92I	GRCGYC	2 cut(s)	408, 502
Hsp92II	CATG	7 cut(s)	42, 90, 407, 509, 863, 914, 1291
HspAI	GCGC	2 cut(s)	502, 563
KasI	GGCGCC	1 cut(s)	501
KspAI	GTTAAC	1 cut(s)	756
Kzo9I	GATC	1 cut(s)	1017
Lsp1109I	GCAGC	8 cut(s)	178, 206, 303, 367, 555, 943, 989, 1168
LweI	GCATC	2 cut(s)	700, 1312
MaeI	CTAG	6 cut(s)	78, 113, 272, 452, 714, 930
MaeII	ACGT	4 cut(s)	52, 677, 771, 1064
MaeIII	GTNAC	3 cut(s)	257, 644, 1281
MalI	GATC	1 cut(s)	1019
MboI	GATC	1 cut(s)	1017
MboII	GAAGA	5 cut(s)	154, 619, 914, 1007, 1321
MhlI	GDGCHC	2 cut(s)	450, 789
MlsI	TGGCCA	1 cut(s)	308
MluCI	AATT	4 cut(s)	144, 412, 1105, 1383
MluNI	TGGCCA	1 cut(s)	308
Mly113I	GGCGCC	1 cut(s)	502
MlyI	GAGTC	2 cut(s)	142, 1279
MmeI	TCCRAC	1 cut(s)	322
Mox20I	TGGCCA	1 cut(s)	308
MscI	TGGCCA	1 cut(s)	308
MseI	TTAA	4 cut(s)	59, 755, 768, 1104
MslI	CAYNNNNRTG	1 cut(s)	1292
Msp20I	TGGCCA	1 cut(s)	308
MspA1I	CMGCKG	2 cut(s)	568, 956
MspI	CCGG	2 cut(s)	248, 759
MspR9I	CCNGG	4 cut(s)	231, 437, 473, 760
MvaI	CCWGG	3 cut(s)	231, 437, 473
MvnI	CGCG	1 cut(s)	419
MwoI	GCNNNNNNNGC	5 cut(s)	220, 416, 468, 856, 911
NarI	GGCGCC	1 cut(s)	502
NciI	CCSGG	1 cut(s)	760
NdeI	CATATG	2 cut(s)	267, 895
NdeII	GATC	1 cut(s)	1017
NlaIII	CATG	7 cut(s)	42, 90, 407, 509, 863, 914, 1291
NlaIV	GGNNCC	5 cut(s)	322, 493, 503, 881, 891
NmuCI	GTSAC	2 cut(s)	257, 644
NruI	TCGCGA	1 cut(s)	419
NspI	RCATGY	3 cut(s)	42, 90, 914
PaeI	GCATGC	1 cut(s)	914
PaeR7I	CTCGAG	1 cut(s)	527
PagI	TCATGA	1 cut(s)	403
PciI	ACATGT	1 cut(s)	86
PfeI	GAWTC	1 cut(s)	22
PflMI	CCANNNNNTGG	1 cut(s)	304
PfoI	TCCNGGA	1 cut(s)	229
PinAI	ACCGGT	1 cut(s)	247
PleI	GAGTC	2 cut(s)	141, 1278
PluTI	GGCGCC	1 cut(s)	505
PpsI	GAGTC	2 cut(s)	141, 1278
PscI	ACATGT	1 cut(s)	86
PshBI	ATTAAT	1 cut(s)	59
Psp6I	CCWGG	3 cut(s)	229, 435, 471
PspEI	GGTNACC	1 cut(s)	257
PspGI	CCWGG	3 cut(s)	229, 435, 471
PspN4I	GGNNCC	5 cut(s)	322, 493, 503, 881, 891
PspPI	GGNCC	7 cut(s)	233, 320, 469, 491, 797, 814, 879
PspXI	VCTCGAGB	1 cut(s)	527
PstI	CTGCAG	4 cut(s)	34, 196, 385, 1007
PstNI	CAGNNNCTG	1 cut(s)	604
RruI	TCGCGA	1 cut(s)	419
RsaI	GTAC	6 cut(s)	351, 488, 523, 837, 1199, 1380
RsaNI	GTAC	6 cut(s)	350, 487, 522, 836, 1198, 1379
RseI	CAYNNNNRTG	1 cut(s)	1292
SaqAI	TTAA	4 cut(s)	59, 755, 768, 1104
Sau3AI	GATC	1 cut(s)	1017
Sau96I	GGNCC	7 cut(s)	233, 320, 469, 491, 797, 814, 879
SchI	GAGTC	2 cut(s)	142, 1279
ScrFI	CCNGG	4 cut(s)	231, 437, 473, 760
SduI	GDGCHC	2 cut(s)	450, 789
SfaNI	GCATC	2 cut(s)	700, 1312
SfcI	CTRYAG	4 cut(s)	30, 192, 381, 1003
SfoI	GGCGCC	1 cut(s)	503
Sfr274I	CTCGAG	1 cut(s)	527
SinI	GGWCC	4 cut(s)	233, 320, 797, 879
SlaI	CTCGAG	1 cut(s)	527
SmiMI	CAYNNNNRTG	1 cut(s)	1292
SmlI	CTYRAG	1 cut(s)	527
SmoI	CTYRAG	1 cut(s)	527
SphI	GCATGC	1 cut(s)	914
Sse9I	AATT	4 cut(s)	144, 412, 1105, 1383
SsiI	CCGC	5 cut(s)	441, 551, 566, 954, 1301
SspDI	GGCGCC	1 cut(s)	501
SspMI	CTAG	6 cut(s)	78, 113, 272, 452, 714, 930
StyD4I	CCNGG	4 cut(s)	229, 435, 471, 758
StyI	CCWWGG	1 cut(s)	340
TaaI	ACNGT	4 cut(s)	433, 591, 879, 1264
TaiI	ACGT	4 cut(s)	55, 680, 774, 1067
TaqI	TCGA	2 cut(s)	528, 545
TaqII	GACCGA	1 cut(s)	785
TasI	AATT	4 cut(s)	144, 412, 1105, 1383
TatI	WGTACW	1 cut(s)	1197
TauI	GCSGC	4 cut(s)	443, 568, 956, 1304
TfiI	GAWTC	1 cut(s)	22
Tru1I	TTAA	4 cut(s)	59, 755, 768, 1104
Tru9I	TTAA	4 cut(s)	59, 755, 768, 1104
TscAI	CASTG	2 cut(s)	49, 1225
TseFI	GTSAC	2 cut(s)	257, 644
TseI	GCWGC	8 cut(s)	191, 194, 291, 380, 568, 956, 1002, 1181
Tsp45I	GTSAC	2 cut(s)	257, 644
TspDTI	ATGAA	3 cut(s)	254, 906, 1064
TspRI	CASTG	2 cut(s)	49, 1225
Van91I	CCANNNNNTGG	1 cut(s)	304
VpaK11BI	GGWCC	4 cut(s)	233, 320, 797, 879
VspI	ATTAAT	1 cut(s)	59
XceI	RCATGY	3 cut(s)	42, 90, 914
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1243
XhoI	CTCGAG	1 cut(s)	527
XspI	CTAG	6 cut(s)	78, 113, 272, 452, 714, 930

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.