Rroxscaffold_7G00188320

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000282
Physical Location & Seq
Reverse (-)
27894699 .. 27897396
2698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00188320.1

Sequence Viewer

Length: 1524 bp
ATGCCAGAAAGAGTGAGTCCTTCAACAATAATGACCATCCTCCTGGTTCTCCTCACATGCCTTTGGTCACTCATCTCTGCCTCCTCAAAATCAAAACACAGAAAACTACCACCCGGCCCTTGGTCATTGCCAATAACGGGAAACCTCCATATGCTAGGCAACCTCCCCCATCGAAGCTTCCAACAATTGGCCAAAAACTACGGACACATCATGTCCATTCGTCTAGGCAATGTTTCTACCATAGTAGTCTCCTCCCCACAAGCCGCAGAGCTATTCCTCAAAACTCATGACACTAATTTCGCCAGCCGGCCCAAAATCCAAGCCTCAGAGTACCTGTCCTACGGCACAAAGGGCATGGCCTTTTCCCAATATGGTCCCTATTGGCGCCATATGAGGAAGCTGTGCACGCTTCATCTCTTCTGTCCAGCAAAAATGGAGGCTTTCAGGCCGCTGCGAAAGGAGGAACTGGGAGTGCTGGTAAGAAAGCTGAAGAGAGCTGCAGAGGAAGGTGGAGTCGTGGATGTTAGTGAGAAGATTGGTGTGATGAATGAGGACATAACGTATAGGATGGTGTTGGGCTGTAAAAGGGATGATAGGTTTGATTTGAAAGCCATTGTTGAGGAAACGCTTTTCTTGACTGGGGCTTTCAATATATCTGATTTTGTTCCTTCCCTTGCTGCACTTGATATTCAGGGATTGACCAAGCGCTTAAAGAAAGTTAGCAAGATGATCGATCAACTCCTGGAGAAGATAATAGACGAGCATGAACACGTTGCCAACACTAGGAGTGGGAAACAAGGCCATGAGGACTTTGTAGACGTGTTGCTTTCGTTAACAAACCAACAGTTGAACCTGAATGATGAGCAAGGACACTTTCTTGATCGAACAAATGTGAAAGCCATCTTACTAGACATGATCACGGCGGCTTTTGATACTTCGGCCACATCGATTGTTTGGAGCCTTGCCGAGCTCTTGAGGCATCCAAGGATCATGAAGAATCTCCAAGAAGAGCTCCAAAGTGTGGTTGGTATGGACCGAATGGTGGAAGAATCTGATTTGCCCAAGCTGGATTACTTGAGTATGGTGGTGAAGGAGAGCTTCAGACTACACCCAGTTGCACCGTTACTAATCCCACATGAATCCATTGAGGACATTACAATCGATGGATATGACATTCCCAAGAAGTCGCGGATCATAGTAAACATCTGGAGCATTGGAAGAGATCCTAATGTTTGGTCCGAAAATGTTGAGGAATTTTATCCTGAAAGGTTCATGAACAGCAATATAGACCTCCGGGGACATGACTTTCAGCTCATCCCATTTGGGTCTGGGCGCAGAGGGTGTCCGGGTATGCAATTAGGACTAACCACAGTTCGGCTAGTTTTGGCACAGCTGGTGCACTGCTTTAACTGGGAGCTCCCAAATGGCTTGGTACCTCAGGACTTGGACATGTCTGAGGATTTCGGCTTATCACTGTCAAAAGCCAAACACTTGCTTGCTAAGCCAACGTACCGTCTTATGTAG

Protein Analysis

507

Amino Acids

57.44

Weight (kDa)

7.29

Isoelectric Point (pI)

41.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 37 - 495 1.1e-104 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000282)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1432
AccB1I GGYRCC 2 cut(s) 384, 1432
AccB7I CCANNNNNTGG 2 cut(s) 187, 1021
AccI GTMKAC 1 cut(s) 816
AccII CGCG 1 cut(s) 1189
AciI CCGC 4 cut(s) 264, 449, 923, 1189
AclWI GGATC 3 cut(s) 995, 1199, 1217
AcoI YGGCCR 2 cut(s) 189, 939
AcsI RAATTY 1 cut(s) 1253
AcuI CTGAAG 2 cut(s) 509, 1084
AcyI GRCGYC 1 cut(s) 385
AfaI GTAC 3 cut(s) 332, 1434, 1511
AfeI AGCGCT 1 cut(s) 707
AfiI CCNNNNNNNGG 7 cut(s) 120, 137, 187, 783, 1021, 1042, 1374
AflIII ACRYGT 3 cut(s) 769, 819, 1449
AgsI TTSAA 4 cut(s) 24, 607, 649, 850
AjiI CACGTC 1 cut(s) 820
AjnI CCWGG 2 cut(s) 42, 741
Alw21I GWGCWC 5 cut(s) 407, 972, 1014, 1401, 1419
Alw26I GTCTC 1 cut(s) 253
Alw44I GTGCAC 2 cut(s) 403, 1397
AlwI GGATC 3 cut(s) 995, 1199, 1217
Aor51HI AGCGCT 1 cut(s) 707
AoxI GGCC 7 cut(s) 115, 189, 308, 357, 446, 799, 939
ApaLI GTGCAC 2 cut(s) 403, 1397
ApeKI GCWGC 3 cut(s) 451, 497, 677
ApoI RAATTY 1 cut(s) 1253
ArsI GACNNNNNNTTYG 2 cut(s) 281, 313
Asp718I GGTACC 1 cut(s) 1432
AspLEI GCGC 3 cut(s) 387, 708, 1335
AspS9I GGNCC 5 cut(s) 116, 309, 374, 1033, 1236
AsuC2I CCSGG 3 cut(s) 114, 1295, 1347
AsuHPI GGTGA 1 cut(s) 1099
AvaII GGWCC 3 cut(s) 374, 1033, 1236
AxyI CCTNAGG 1 cut(s) 1437
BaeGI GKGCMC 2 cut(s) 407, 1401
BalI TGGCCA 1 cut(s) 191
BanI GGYRCC 2 cut(s) 384, 1432
BanII GRGCYC 3 cut(s) 972, 1014, 1419
Bbv12I GWGCWC 5 cut(s) 407, 972, 1014, 1401, 1419
BbvI GCAGC 3 cut(s) 438, 484, 664
BccI CCATC 5 cut(s) 44, 177, 562, 908, 1157
BceAI ACGGC 2 cut(s) 358, 936
BcgI CGANNNNNNTGC 2 cut(s) 712, 746
BciT130I CCWGG 2 cut(s) 44, 743
BclI TGATCA 1 cut(s) 915
BcnI CCSGG 3 cut(s) 114, 1295, 1347
BcoDI GTCTC 1 cut(s) 253
BfaI CTAG 5 cut(s) 155, 224, 783, 908, 1379
BfmI CTRYAG 1 cut(s) 498
BfoI RGCGCY 2 cut(s) 388, 709
BisI GCNGC 6 cut(s) 264, 449, 452, 498, 678, 924
BlpI GCTNAGC 1 cut(s) 1500
BlsI GCNGC 6 cut(s) 265, 450, 453, 499, 679, 925
Bme1390I CCNGG 5 cut(s) 44, 114, 743, 1295, 1347
Bme18I GGWCC 3 cut(s) 374, 1033, 1236
BmgBI CACGTC 1 cut(s) 820
BmgT120I GGNCC 5 cut(s) 116, 309, 374, 1033, 1236
BmiI GGNNCC 4 cut(s) 376, 386, 959, 1434
BmrFI CCNGG 5 cut(s) 44, 114, 743, 1295, 1347
BmrI ACTGGG 4 cut(s) 476, 648, 1106, 1420
BmsI GCATC 1 cut(s) 988
BmuI ACTGGG 4 cut(s) 476, 648, 1106, 1420
BpmI CTGGAG 2 cut(s) 764, 1228
Bpu1102I GCTNAGC 1 cut(s) 1500
BpuEI CTTGAG 2 cut(s) 994, 1096
BpuMI CCSGG 3 cut(s) 114, 1295, 1347
Bsa29I ATCGAT 3 cut(s) 732, 947, 1161
BsaHI GRCGYC 1 cut(s) 385
BsaJI CCNNGG 3 cut(s) 119, 983, 1294
BsaXI ACNNNNNCTCC 2 cut(s) 462, 492
Bsc4I CCNNNNNNNGG 7 cut(s) 120, 137, 187, 783, 1021, 1042, 1374
Bse118I RCCGGY 1 cut(s) 306
Bse1I ACTGG 4 cut(s) 471, 643, 1112, 1415
Bse21I CCTNAGG 1 cut(s) 1437
Bse3DI GCAATG 2 cut(s) 125, 235
BseBI CCWGG 2 cut(s) 44, 743
BseCI ATCGAT 3 cut(s) 732, 947, 1161
BseDI CCNNGG 3 cut(s) 119, 983, 1294
BseGI GGATG 6 cut(s) 36, 526, 573, 595, 979, 1314
BseLI CCNNNNNNNGG 7 cut(s) 120, 137, 187, 783, 1021, 1042, 1374
BseMI GCAATG 2 cut(s) 125, 235
BseMII CTCAG 3 cut(s) 339, 1446, 1451
BseNI ACTGG 4 cut(s) 471, 643, 1112, 1415
BseRI GAGGAG 3 cut(s) 41, 73, 241
BseSI GKGCMC 2 cut(s) 407, 1401
BseXI GCAGC 3 cut(s) 438, 484, 664
BsgI GTGCAG 1 cut(s) 663
Bsh1236I CGCG 1 cut(s) 1189
BshFI GGCC 7 cut(s) 117, 191, 310, 359, 448, 801, 941
BshNI GGYRCC 2 cut(s) 384, 1432
BshVI ATCGAT 3 cut(s) 732, 947, 1161
BsiHKAI GWGCWC 5 cut(s) 407, 972, 1014, 1401, 1419
BsiSI CCGG 4 cut(s) 114, 307, 1294, 1346
BslFI GGGAC 2 cut(s) 360, 1311
BslI CCNNNNNNNGG 7 cut(s) 120, 137, 187, 783, 1021, 1042, 1374
BsmAI GTCTC 1 cut(s) 253
BsmFI GGGAC 2 cut(s) 360, 1311
BsnI GGCC 7 cut(s) 117, 191, 310, 359, 448, 801, 941
Bsp1286I GDGCHC 5 cut(s) 407, 972, 1014, 1401, 1419
Bsp143I GATC 7 cut(s) 729, 733, 880, 915, 987, 1191, 1222
Bsp1720I GCTNAGC 1 cut(s) 1500
BspACI CCGC 4 cut(s) 264, 449, 923, 1189
BspANI GGCC 7 cut(s) 117, 191, 310, 359, 448, 801, 941
BspCNI CTCAG 3 cut(s) 338, 1447, 1450
BspDI ATCGAT 3 cut(s) 732, 947, 1161
BspFNI CGCG 1 cut(s) 1189
BspHI TCATGA 3 cut(s) 286, 990, 1272
BspLI GGNNCC 4 cut(s) 376, 386, 959, 1434
BspMAI CTGCAG 1 cut(s) 502
BspPI GGATC 3 cut(s) 995, 1199, 1217
BspQI GCTCTTC 1 cut(s) 1002
BspT107I GGYRCC 2 cut(s) 384, 1432
BsrDI GCAATG 2 cut(s) 125, 235
BsrFI RCCGGY 1 cut(s) 306
BsrI ACTGG 4 cut(s) 471, 643, 1112, 1415
BssAI RCCGGY 1 cut(s) 306
BssECI CCNNGG 3 cut(s) 119, 983, 1294
BssMI GATC 7 cut(s) 729, 733, 880, 915, 987, 1191, 1222
BssNI GRCGYC 1 cut(s) 385
BssT1I CCWWGG 2 cut(s) 119, 983
Bst2UI CCWGG 2 cut(s) 44, 743
Bst4CI ACNGT 5 cut(s) 846, 1122, 1372, 1476, 1514
Bst6I CTCTTC 4 cut(s) 422, 485, 1002, 1213
BstACI GRCGYC 1 cut(s) 385
BstC8I GCNNGC 4 cut(s) 304, 308, 407, 1497
BstDEI CTNAG 4 cut(s) 325, 1437, 1455, 1500
BstF5I GGATG 6 cut(s) 36, 526, 573, 595, 979, 1314
BstFNI CGCG 1 cut(s) 1189
BstH2I RGCGCY 2 cut(s) 388, 709
BstHHI GCGC 3 cut(s) 387, 708, 1335
BstKTI GATC 7 cut(s) 732, 736, 883, 918, 990, 1194, 1225
BstMAI GTCTC 1 cut(s) 253
BstMBI GATC 7 cut(s) 729, 733, 880, 915, 987, 1191, 1222
BstMWI GCNNNNNNNGC 4 cut(s) 351, 406, 976, 1501
BstNI CCWGG 2 cut(s) 44, 743
BstNSI RCATGY 2 cut(s) 60, 1453
BstSCI CCNGG 5 cut(s) 42, 112, 741, 1293, 1345
BstSFI CTRYAG 1 cut(s) 498
BstSLI GKGCMC 2 cut(s) 407, 1401
BstUI CGCG 1 cut(s) 1189
BstV1I GCAGC 3 cut(s) 438, 484, 664
BstX2I RGATCY 1 cut(s) 1222
BstXI CCANNNNNNTGG 1 cut(s) 43
BstYI RGATCY 1 cut(s) 1222
Bsu15I ATCGAT 3 cut(s) 732, 947, 1161
Bsu36I CCTNAGG 1 cut(s) 1437
BsuRI GGCC 7 cut(s) 117, 191, 310, 359, 448, 801, 941
BsuTUI ATCGAT 3 cut(s) 732, 947, 1161
BtrI CACGTC 1 cut(s) 820
BtsCI GGATG 6 cut(s) 36, 526, 573, 595, 979, 1314
BtsI GCAGTG 1 cut(s) 1399
BtsIMutI CAGTG 2 cut(s) 1399, 1472
Cac8I GCNNGC 4 cut(s) 304, 308, 407, 1497
CciI TCATGA 3 cut(s) 286, 990, 1272
CfoI GCGC 3 cut(s) 387, 708, 1335
Cfr10I RCCGGY 1 cut(s) 306
Cfr13I GGNCC 5 cut(s) 116, 309, 374, 1033, 1236
ClaI ATCGAT 3 cut(s) 732, 947, 1161
Csp6I GTAC 3 cut(s) 331, 1433, 1510
CspCI CAANNNNNGTGG 2 cut(s) 931, 966
CviQI GTAC 3 cut(s) 331, 1433, 1510
DdeI CTNAG 4 cut(s) 325, 1437, 1455, 1500
DinI GGCGCC 1 cut(s) 386
DpnI GATC 7 cut(s) 731, 735, 882, 917, 989, 1193, 1224
DpnII GATC 7 cut(s) 729, 733, 880, 915, 987, 1191, 1222
EaeI YGGCCR 2 cut(s) 189, 939
Eam1104I CTCTTC 4 cut(s) 422, 485, 1002, 1213
EarI CTCTTC 4 cut(s) 422, 485, 1002, 1213
Ecl136II GAGCTC 3 cut(s) 970, 1012, 1417
Eco130I CCWWGG 2 cut(s) 119, 983
Eco24I GRGCYC 3 cut(s) 972, 1014, 1419
Eco47I GGWCC 3 cut(s) 374, 1033, 1236
Eco47III AGCGCT 1 cut(s) 707
Eco53kI GAGCTC 3 cut(s) 970, 1012, 1417
Eco57I CTGAAG 2 cut(s) 509, 1084
Eco81I CCTNAGG 1 cut(s) 1437
EcoICRI GAGCTC 3 cut(s) 970, 1012, 1417
EcoRII CCWGG 2 cut(s) 42, 741
EcoT14I CCWWGG 2 cut(s) 119, 983
EcoT38I GRGCYC 3 cut(s) 972, 1014, 1419
EgeI GGCGCC 1 cut(s) 386
EheI GGCGCC 1 cut(s) 386
ErhI CCWWGG 2 cut(s) 119, 983
FalI AAGNNNNNCTT 2 cut(s) 1082, 1114
FaqI GGGAC 2 cut(s) 360, 1311
FauNDI CATATG 2 cut(s) 150, 390
FbaI TGATCA 1 cut(s) 915
FblI GTMKAC 1 cut(s) 816
Fnu4HI GCNGC 6 cut(s) 264, 449, 452, 498, 678, 924
FokI GGATG 6 cut(s) 23, 533, 580, 602, 966, 1301
FriOI GRGCYC 3 cut(s) 972, 1014, 1419
Fsp4HI GCNGC 6 cut(s) 264, 449, 452, 498, 678, 924
FspBI CTAG 5 cut(s) 155, 224, 783, 908, 1379
GlaI GCGC 3 cut(s) 386, 707, 1334
GluI GCNGC 6 cut(s) 264, 449, 452, 498, 678, 924
GsuI CTGGAG 2 cut(s) 764, 1228
HaeII RGCGCY 2 cut(s) 388, 709
HaeIII GGCC 7 cut(s) 117, 191, 310, 359, 448, 801, 941
HapII CCGG 4 cut(s) 114, 307, 1294, 1346
HhaI GCGC 3 cut(s) 387, 708, 1335
Hin1I GRCGYC 1 cut(s) 385
Hin6I GCGC 3 cut(s) 385, 706, 1333
HinP1I GCGC 3 cut(s) 385, 706, 1333
HincII GTYRAC 1 cut(s) 834
HindII GTYRAC 1 cut(s) 834
HindIII AAGCTT 1 cut(s) 175
HinfI GANTC 5 cut(s) 16, 513, 997, 1049, 1139
HpaI GTTAAC 1 cut(s) 834
HpaII CCGG 4 cut(s) 114, 307, 1294, 1346
HphI GGTGA 1 cut(s) 1099
Hpy166II GTNNAC 5 cut(s) 405, 817, 834, 1201, 1399
Hpy188I TCNGA 6 cut(s) 328, 658, 1054, 1103, 1240, 1456
Hpy188III TCNNGA 9 cut(s) 287, 634, 878, 973, 991, 1207, 1262, 1273, 1439
Hpy8I GTNNAC 5 cut(s) 405, 817, 834, 1201, 1399
HpyAV CCTTC 4 cut(s) 30, 500, 678, 1084
HpyCH4III ACNGT 5 cut(s) 846, 1122, 1372, 1476, 1514
HpyCH4IV ACGT 4 cut(s) 560, 771, 819, 1508
HpyCH4V TGCA 6 cut(s) 405, 500, 680, 1118, 1354, 1399
HpyF10VI GCNNNNNNNGC 4 cut(s) 351, 406, 976, 1501
HpyF3I CTNAG 4 cut(s) 325, 1437, 1455, 1500
HpySE526I ACGT 4 cut(s) 560, 771, 819, 1508
Hsp92I GRCGYC 1 cut(s) 385
HspAI GCGC 3 cut(s) 385, 706, 1333
KasI GGCGCC 1 cut(s) 384
KpnI GGTACC 1 cut(s) 1436
KroI GCCGGC 1 cut(s) 306
KroNI GCCGGC 1 cut(s) 308
Ksp22I TGATCA 1 cut(s) 915
KspAI GTTAAC 1 cut(s) 834
Kzo9I GATC 7 cut(s) 729, 733, 880, 915, 987, 1191, 1222
LguI GCTCTTC 1 cut(s) 1002
LmnI GCTCC 5 cut(s) 957, 1017, 1209, 1414, 1422
Lsp1109I GCAGC 3 cut(s) 438, 484, 664
LweI GCATC 1 cut(s) 988
MaeI CTAG 5 cut(s) 155, 224, 783, 908, 1379
MaeII ACGT 4 cut(s) 560, 771, 819, 1508
MaeIII GTNAC 2 cut(s) 66, 1122
MalI GATC 7 cut(s) 731, 735, 882, 917, 989, 1193, 1224
MboI GATC 7 cut(s) 729, 733, 880, 915, 987, 1191, 1222
MboII GAAGA 8 cut(s) 409, 502, 544, 760, 1006, 1019, 1058, 1230
MfeI CAATTG 1 cut(s) 185
MflI RGATCY 1 cut(s) 1222
MhlI GDGCHC 5 cut(s) 407, 972, 1014, 1401, 1419
MlsI TGGCCA 1 cut(s) 191
MluCI AATT 4 cut(s) 185, 295, 1253, 1355
MluNI TGGCCA 1 cut(s) 191
Mly113I GGCGCC 1 cut(s) 385
MlyI GAGTC 2 cut(s) 25, 522
MmeI TCCRAC 1 cut(s) 205
Mox20I TGGCCA 1 cut(s) 191
MroNI GCCGGC 1 cut(s) 306
MscI TGGCCA 1 cut(s) 191
MseI TTAA 3 cut(s) 710, 833, 1407
Msp20I TGGCCA 1 cut(s) 191
MspA1I CMGCKG 2 cut(s) 451, 1393
MspI CCGG 4 cut(s) 114, 307, 1294, 1346
MspR9I CCNGG 5 cut(s) 44, 114, 743, 1295, 1347
MunI CAATTG 1 cut(s) 185
MvaI CCWGG 2 cut(s) 44, 743
MvnI CGCG 1 cut(s) 1189
MwoI GCNNNNNNNGC 4 cut(s) 351, 406, 976, 1501
NaeI GCCGGC 1 cut(s) 308
NarI GGCGCC 1 cut(s) 385
NciI CCSGG 3 cut(s) 114, 1295, 1347
NdeI CATATG 2 cut(s) 150, 390
NdeII GATC 7 cut(s) 729, 733, 880, 915, 987, 1191, 1222
NgoMIV GCCGGC 1 cut(s) 306
NlaIV GGNNCC 4 cut(s) 376, 386, 959, 1434
NmeAIII GCCGAG 1 cut(s) 991
NmuCI GTSAC 1 cut(s) 66
NspI RCATGY 2 cut(s) 60, 1453
PagI TCATGA 3 cut(s) 286, 990, 1272
PciI ACATGT 1 cut(s) 1449
PciSI GCTCTTC 1 cut(s) 1002
PcsI WCGNNNNNNNCGW 1 cut(s) 944
PdiI GCCGGC 1 cut(s) 308
PfeI GAWTC 3 cut(s) 997, 1049, 1139
PflMI CCANNNNNTGG 2 cut(s) 187, 1021
PfoI TCCNGGA 1 cut(s) 741
PkrI GCNGC 6 cut(s) 265, 450, 453, 499, 679, 925
PleI GAGTC 2 cut(s) 24, 521
PluTI GGCGCC 1 cut(s) 388
PpsI GAGTC 2 cut(s) 24, 521
PscI ACATGT 1 cut(s) 1449
Psp124BI GAGCTC 3 cut(s) 972, 1014, 1419
Psp6I CCWGG 2 cut(s) 42, 741
PspGI CCWGG 2 cut(s) 42, 741
PspN4I GGNNCC 4 cut(s) 376, 386, 959, 1434
PspPI GGNCC 5 cut(s) 116, 309, 374, 1033, 1236
PstI CTGCAG 1 cut(s) 502
PsuI RGATCY 1 cut(s) 1222
PvuII CAGCTG 1 cut(s) 1393
RsaI GTAC 3 cut(s) 332, 1434, 1511
RsaNI GTAC 3 cut(s) 331, 1433, 1510
SacI GAGCTC 3 cut(s) 972, 1014, 1419
SapI GCTCTTC 1 cut(s) 1002
SaqAI TTAA 3 cut(s) 710, 833, 1407
SatI GCNGC 6 cut(s) 264, 449, 452, 498, 678, 924
Sau3AI GATC 7 cut(s) 729, 733, 880, 915, 987, 1191, 1222
Sau96I GGNCC 5 cut(s) 116, 309, 374, 1033, 1236
SchI GAGTC 2 cut(s) 25, 522
ScrFI CCNGG 5 cut(s) 44, 114, 743, 1295, 1347
SduI GDGCHC 5 cut(s) 407, 972, 1014, 1401, 1419
SfaNI GCATC 1 cut(s) 988
SfcI CTRYAG 1 cut(s) 498
SfoI GGCGCC 1 cut(s) 386
SinI GGWCC 3 cut(s) 374, 1033, 1236
SmlI CTYRAG 2 cut(s) 973, 1075
SmoI CTYRAG 2 cut(s) 973, 1075
Sse9I AATT 4 cut(s) 185, 295, 1253, 1355
SsiI CCGC 4 cut(s) 264, 449, 923, 1189
SspDI GGCGCC 1 cut(s) 384
SspMI CTAG 5 cut(s) 155, 224, 783, 908, 1379
SstI GAGCTC 3 cut(s) 972, 1014, 1419
StyD4I CCNGG 5 cut(s) 42, 112, 741, 1293, 1345
StyI CCWWGG 2 cut(s) 119, 983
TaaI ACNGT 5 cut(s) 846, 1122, 1372, 1476, 1514
TaiI ACGT 4 cut(s) 563, 774, 822, 1511
TaqI TCGA 5 cut(s) 172, 732, 883, 947, 1161
TaqII GACCGA 1 cut(s) 1050
TasI AATT 4 cut(s) 185, 295, 1253, 1355
TauI GCSGC 3 cut(s) 266, 451, 926
TfiI GAWTC 3 cut(s) 997, 1049, 1139
Tru1I TTAA 3 cut(s) 710, 833, 1407
Tru9I TTAA 3 cut(s) 710, 833, 1407
TscAI CASTG 2 cut(s) 1406, 1479
TseFI GTSAC 1 cut(s) 66
TseI GCWGC 3 cut(s) 451, 497, 677
Tsp45I GTSAC 1 cut(s) 66
TspDTI ATGAA 7 cut(s) 401, 560, 780, 1007, 1152, 1261, 1289
TspGWI ACGGA 1 cut(s) 216
TspRI CASTG 2 cut(s) 1406, 1479
Van91I CCANNNNNTGG 2 cut(s) 187, 1021
VneI GTGCAC 2 cut(s) 403, 1397
VpaK11BI GGWCC 3 cut(s) 374, 1033, 1236
XapI RAATTY 1 cut(s) 1253
XceI RCATGY 2 cut(s) 60, 1453
XcmI CCANNNNNNNNNTGG 2 cut(s) 117, 1022
XmiI GTMKAC 1 cut(s) 816
XspI CTAG 5 cut(s) 155, 224, 783, 908, 1379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.