Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000282

Physical Location & Seq

Genomic Coordinates Forward (+)

27807518 .. 27908260

Gene Structure 100743 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00104640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGAGTCCTTTAACAATAATGGCCATCCTCCTAGTTCTCCTCACATATCTTTGGTCACTCATCTCTGCCTCCTCAAAATCAAACCACAGAAAACTACCACCCGGCCCTCGGTCACTGCCAATAATTGGAAACCTCCATATGCTAGGCAACCTCCCCCATCGAAGCCTCCAACAATTGGCCAAAAAATATGGACACATCATGTTCATTCGTCTAGGCAATGTTCCTACTATAGTAGTCTCCTCCCCAAAAGCCTCGCAGCTATTCCTCAAAACTCATGACAATAATTTTGCCAGCCGACCCAAAACCCAAGCCTCGCAGTACCTCTCCTACGGCACAAAGGGCATGATCCTTTCCCAATACGGTCCTTATTGGCGCCATATTATGAAGCTCAGCACTCTTCATCTCTTCGTCCAGCGAAAATGGAGGCTTTCGAGCCGCTGCGAAAAAAGGAACTGGGAGGGCTGGTTAGAAAGTCGAAGAGCTGCAAAGGAAAGTAGAGTTGTAAATGTTAATGAGAAGATTGGTGTGACGATTGAGAACATAACGTGTGGGATGGTGTTGGGTTGTAAAAAGGATGATAGGTTTGATTTGAAAGCCATTGTTGAGGAAACAGTTTTATTGGCTAGGGCTTTCAATATATCCGACTTTGTTCCTTCCCTTGCTGCACTTGATATTCAGGGATTGACTAAGCGCTTAAAGAAAGTTAGCAAGATGATCGATCAACTCCCGGAGAAGATATTAGATGAGCACGAACATGTTGCCAACACTAAGAATGGGAAACAAGGCCAACATGAGGACTTTGTAGACATGTTGCTTTCATTAACGAACCAACCACCGAACCCGAATGATGAGCAACTACACTTTCTTGATCGAACAAATGTGAAAGCCATCTTACTAGACATGATCGTGGCGGCTACCGATACTTCGGTCACATCAATTGTTTGGAGCCTTGCCGAGCTCTTGAGGCATCCAAGGATCATGAAAAATCTCCAAGAAGAGCTCCAAAGTGTGGTGGGTATGGACCAAATGGTGGACAAATCAGATTTGCCCAAGCTAAATTACTTGAGTATGGTGGTGAAAGAAAGCTTTAGACTACACCCGGTTGTACCAATAGTCCCACGTGAATCTATTGAGCACATTACAATCGATGGATATGACATACCCAAAAAGTCTCGGATCATGGTAAATATACGGAGCATTGGAAGAGATCCTAATGTTTGGTCAGAAAATGTGGAGGAATTTTATCCCGAAAGGTTCAAGAACAACAATATAGACCTCCGGGGACAAGACTTTGAGCTCATCCCATTTAGGTCGGGGCGAAGAGGTTGTCCCGGTATGCAATTAGGGCTAACCACAATTCAGCTAGTTTTGGCACAGTTGGTCCACCGCTTTAAGCGGGAGCTCCCAACCGGCATGCAACCTCAAGACTTGGACATGGCTGAGAATTTCGGTTTAAGTATGTCAAAAGCCAAACACTTGCTTGCGAAGCCAACTTACCGTCTTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0055114 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

502

Amino Acids

57.3

Weight (kDa)

9.59

Isoelectric Point (pI)

45.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	33 - 491	5.9e-90	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000282)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica	MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica	Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis	pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis	RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata	RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora	Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa	Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha	Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana	Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	372
AccB7I	CCANNNNNTGG	4 cut(s)	125, 175, 1009, 1030
AccI	GTMKAC	1 cut(s)	804
AciI	CCGC	4 cut(s)	436, 911, 1387, 1396
AclWI	GGATC	4 cut(s)	340, 983, 1184, 1202
AcoI	YGGCCR	2 cut(s)	21, 177
AcsI	RAATTY	2 cut(s)	1238, 1444
AcvI	CACGTG	1 cut(s)	1121
AcyI	GRCGYC	1 cut(s)	373
AfaI	GTAC	2 cut(s)	320, 1107
AfeI	AGCGCT	1 cut(s)	692
AfiI	CCNNNNNNNGG	6 cut(s)	108, 125, 175, 793, 1009, 1030
AflIII	ACRYGT	3 cut(s)	545, 754, 807
AgsI	TTSAA	3 cut(s)	592, 634, 1258
Alw21I	GWGCWC	6 cut(s)	750, 960, 1002, 1137, 1299, 1404
Alw26I	GTCTC	2 cut(s)	241, 1176
AlwI	GGATC	4 cut(s)	340, 983, 1184, 1202
Aor51HI	AGCGCT	1 cut(s)	692
AoxI	GGCC	4 cut(s)	21, 103, 177, 784
ApeKI	GCWGC	4 cut(s)	256, 438, 482, 662
ApoI	RAATTY	2 cut(s)	1238, 1444
ArsI	GACNNNNNNTTYG	4 cut(s)	269, 301, 1312, 1344
AspLEI	GCGC	2 cut(s)	375, 693
AspS9I	GGNCC	4 cut(s)	104, 362, 1021, 1381
AsuC2I	CCSGG	5 cut(s)	102, 728, 1100, 1280, 1332
AsuHPI	GGTGA	1 cut(s)	1087
AvaII	GGWCC	3 cut(s)	362, 1021, 1381
BaeI	ACNNNNGTAYC	2 cut(s)	912, 945
BalI	TGGCCA	2 cut(s)	23, 179
BanI	GGYRCC	1 cut(s)	372
BanII	GRGCYC	4 cut(s)	960, 1002, 1299, 1404
BarI	GAAGNNNNNNTAC	1 cut(s)	1478
BbrPI	CACGTG	1 cut(s)	1121
Bbv12I	GWGCWC	6 cut(s)	750, 960, 1002, 1137, 1299, 1404
BbvI	GCAGC	4 cut(s)	268, 425, 469, 649
BccI	CCATC	5 cut(s)	32, 165, 547, 896, 1142
BceAI	ACGGC	1 cut(s)	346
BcgI	CGANNNNNNTGC	4 cut(s)	697, 731, 740, 774
BcnI	CCSGG	5 cut(s)	102, 728, 1100, 1280, 1332
BcoDI	GTCTC	2 cut(s)	241, 1176
BfaI	CTAG	6 cut(s)	32, 143, 212, 624, 896, 1364
BfmI	CTRYAG	1 cut(s)	228
BfoI	RGCGCY	2 cut(s)	376, 694
BisI	GCNGC	6 cut(s)	257, 436, 439, 483, 663, 912
BlpI	GCTNAGC	1 cut(s)	389
BlsI	GCNGC	6 cut(s)	258, 437, 440, 484, 664, 913
Bme1390I	CCNGG	5 cut(s)	102, 728, 1100, 1280, 1332
Bme18I	GGWCC	3 cut(s)	362, 1021, 1381
BmgT120I	GGNCC	4 cut(s)	104, 362, 1021, 1381
BmiI	GGNNCC	2 cut(s)	374, 947
BmrFI	CCNGG	5 cut(s)	102, 728, 1100, 1280, 1332
BmrI	ACTGGG	1 cut(s)	463
BmsI	GCATC	1 cut(s)	976
BmuI	ACTGGG	1 cut(s)	463
Bpu1102I	GCTNAGC	1 cut(s)	389
BpuEI	CTTGAG	3 cut(s)	982, 1084, 1407
BpuMI	CCSGG	5 cut(s)	102, 728, 1100, 1280, 1332
Bsa29I	ATCGAT	2 cut(s)	717, 1146
BsaAI	YACGTR	1 cut(s)	1121
BsaHI	GRCGYC	1 cut(s)	373
BsaJI	CCNNGG	3 cut(s)	107, 971, 1279
BsaXI	ACNNNNNCTCC	2 cut(s)	449, 479
Bsc4I	CCNNNNNNNGG	6 cut(s)	108, 125, 175, 793, 1009, 1030
Bse118I	RCCGGY	1 cut(s)	1409
Bse1I	ACTGG	1 cut(s)	458
Bse3DI	GCAATG	1 cut(s)	223
BseCI	ATCGAT	2 cut(s)	717, 1146
BseDI	CCNNGG	3 cut(s)	107, 971, 1279
BseGI	GGATG	5 cut(s)	24, 558, 580, 967, 1299
BseLI	CCNNNNNNNGG	6 cut(s)	108, 125, 175, 793, 1009, 1030
BseMI	GCAATG	1 cut(s)	223
BseMII	CTCAG	2 cut(s)	403, 1431
BseNI	ACTGG	1 cut(s)	458
BseRI	GAGGAG	3 cut(s)	29, 61, 229
BseXI	GCAGC	4 cut(s)	268, 425, 469, 649
BsgI	GTGCAG	1 cut(s)	648
BshFI	GGCC	4 cut(s)	23, 105, 179, 786
BshNI	GGYRCC	1 cut(s)	372
BshVI	ATCGAT	2 cut(s)	717, 1146
BsiHKAI	GWGCWC	6 cut(s)	750, 960, 1002, 1137, 1299, 1404
BsiSI	CCGG	6 cut(s)	102, 728, 1100, 1279, 1332, 1410
BslFI	GGGAC	3 cut(s)	1100, 1296, 1314
BslI	CCNNNNNNNGG	6 cut(s)	108, 125, 175, 793, 1009, 1030
BsmAI	GTCTC	2 cut(s)	241, 1176
BsmFI	GGGAC	3 cut(s)	1100, 1296, 1314
BsnI	GGCC	4 cut(s)	23, 105, 179, 786
Bsp1286I	GDGCHC	6 cut(s)	750, 960, 1002, 1137, 1299, 1404
Bsp143I	GATC	8 cut(s)	345, 714, 718, 868, 903, 975, 1176, 1207
Bsp1720I	GCTNAGC	1 cut(s)	389
BspACI	CCGC	4 cut(s)	436, 911, 1387, 1396
BspANI	GGCC	4 cut(s)	23, 105, 179, 786
BspCNI	CTCAG	2 cut(s)	402, 1432
BspDI	ATCGAT	2 cut(s)	717, 1146
BspHI	TCATGA	2 cut(s)	274, 978
BspLI	GGNNCC	2 cut(s)	374, 947
BspPI	GGATC	4 cut(s)	340, 983, 1184, 1202
BspQI	GCTCTTC	2 cut(s)	472, 990
BspT107I	GGYRCC	1 cut(s)	372
BsrDI	GCAATG	1 cut(s)	223
BsrFI	RCCGGY	1 cut(s)	1409
BsrI	ACTGG	1 cut(s)	458
BssAI	RCCGGY	1 cut(s)	1409
BssECI	CCNNGG	3 cut(s)	107, 971, 1279
BssMI	GATC	8 cut(s)	345, 714, 718, 868, 903, 975, 1176, 1207
BssNI	GRCGYC	1 cut(s)	373
BssT1I	CCWWGG	1 cut(s)	971
Bst4CI	ACNGT	4 cut(s)	362, 613, 1377, 1499
Bst6I	CTCTTC	6 cut(s)	402, 410, 472, 990, 1198, 1315
BstACI	GRCGYC	1 cut(s)	373
BstBAI	YACGTR	1 cut(s)	1121
BstC8I	GCNNGC	3 cut(s)	292, 1415, 1482
BstDEI	CTNAG	4 cut(s)	389, 687, 768, 1440
BstF5I	GGATG	5 cut(s)	24, 558, 580, 967, 1299
BstH2I	RGCGCY	2 cut(s)	376, 694
BstHHI	GCGC	2 cut(s)	375, 693
BstKTI	GATC	8 cut(s)	348, 717, 721, 871, 906, 978, 1179, 1210
BstMAI	GTCTC	2 cut(s)	241, 1176
BstMBI	GATC	8 cut(s)	345, 714, 718, 868, 903, 975, 1176, 1207
BstMWI	GCNNNNNNNGC	4 cut(s)	339, 964, 1345, 1486
BstNSI	RCATGY	3 cut(s)	758, 811, 1417
BstSCI	CCNGG	5 cut(s)	100, 726, 1098, 1278, 1330
BstSFI	CTRYAG	1 cut(s)	228
BstV1I	GCAGC	4 cut(s)	268, 425, 469, 649
BstX2I	RGATCY	1 cut(s)	1207
BstYI	RGATCY	1 cut(s)	1207
Bsu15I	ATCGAT	2 cut(s)	717, 1146
BsuRI	GGCC	4 cut(s)	23, 105, 179, 786
BsuTUI	ATCGAT	2 cut(s)	717, 1146
BtsCI	GGATG	5 cut(s)	24, 558, 580, 967, 1299
BtsI	GCAGTG	1 cut(s)	113
BtsIMutI	CAGTG	1 cut(s)	113
Cac8I	GCNNGC	3 cut(s)	292, 1415, 1482
CciI	TCATGA	2 cut(s)	274, 978
CfoI	GCGC	2 cut(s)	375, 693
Cfr10I	RCCGGY	1 cut(s)	1409
Cfr13I	GGNCC	4 cut(s)	104, 362, 1021, 1381
ClaI	ATCGAT	2 cut(s)	717, 1146
Csp6I	GTAC	2 cut(s)	319, 1106
CviQI	GTAC	2 cut(s)	319, 1106
DdeI	CTNAG	4 cut(s)	389, 687, 768, 1440
DinI	GGCGCC	1 cut(s)	374
DpnI	GATC	8 cut(s)	347, 716, 720, 870, 905, 977, 1178, 1209
DpnII	GATC	8 cut(s)	345, 714, 718, 868, 903, 975, 1176, 1207
EaeI	YGGCCR	2 cut(s)	21, 177
Eam1104I	CTCTTC	6 cut(s)	402, 410, 472, 990, 1198, 1315
EarI	CTCTTC	6 cut(s)	402, 410, 472, 990, 1198, 1315
Ecl136II	GAGCTC	4 cut(s)	958, 1000, 1297, 1402
Eco130I	CCWWGG	1 cut(s)	971
Eco24I	GRGCYC	4 cut(s)	960, 1002, 1299, 1404
Eco47I	GGWCC	3 cut(s)	362, 1021, 1381
Eco47III	AGCGCT	1 cut(s)	692
Eco53kI	GAGCTC	4 cut(s)	958, 1000, 1297, 1402
Eco72I	CACGTG	1 cut(s)	1121
EcoICRI	GAGCTC	4 cut(s)	958, 1000, 1297, 1402
EcoT14I	CCWWGG	1 cut(s)	971
EcoT38I	GRGCYC	4 cut(s)	960, 1002, 1299, 1404
EgeI	GGCGCC	1 cut(s)	374
EheI	GGCGCC	1 cut(s)	374
ErhI	CCWWGG	1 cut(s)	971
FaqI	GGGAC	3 cut(s)	1100, 1296, 1314
FauI	CCCGC	1 cut(s)	1389
FauNDI	CATATG	1 cut(s)	138
FblI	GTMKAC	1 cut(s)	804
Fnu4HI	GCNGC	6 cut(s)	257, 436, 439, 483, 663, 912
FokI	GGATG	5 cut(s)	11, 565, 587, 954, 1286
FriOI	GRGCYC	4 cut(s)	960, 1002, 1299, 1404
Fsp4HI	GCNGC	6 cut(s)	257, 436, 439, 483, 663, 912
FspBI	CTAG	6 cut(s)	32, 143, 212, 624, 896, 1364
GlaI	GCGC	2 cut(s)	374, 692
GluI	GCNGC	6 cut(s)	257, 436, 439, 483, 663, 912
HaeII	RGCGCY	2 cut(s)	376, 694
HaeIII	GGCC	4 cut(s)	23, 105, 179, 786
HapII	CCGG	6 cut(s)	102, 728, 1100, 1279, 1332, 1410
HhaI	GCGC	2 cut(s)	375, 693
Hin1I	GRCGYC	1 cut(s)	373
Hin6I	GCGC	2 cut(s)	373, 691
HinP1I	GCGC	2 cut(s)	373, 691
HindIII	AAGCTT	1 cut(s)	1084
HinfI	GANTC	2 cut(s)	4, 1124
HpaII	CCGG	6 cut(s)	102, 728, 1100, 1279, 1332, 1410
HphI	GGTGA	1 cut(s)	1087
Hpy166II	GTNNAC	3 cut(s)	805, 1033, 1384
Hpy188I	TCNGA	4 cut(s)	643, 1042, 1176, 1225
Hpy188III	TCNNGA	7 cut(s)	275, 866, 961, 979, 1247, 1258, 1424
Hpy8I	GTNNAC	3 cut(s)	805, 1033, 1384
HpyAV	CCTTC	1 cut(s)	663
HpyCH4III	ACNGT	4 cut(s)	362, 613, 1377, 1499
HpyCH4IV	ACGT	2 cut(s)	545, 1120
HpyCH4V	TGCA	4 cut(s)	485, 665, 1339, 1417
HpyF10VI	GCNNNNNNNGC	4 cut(s)	339, 964, 1345, 1486
HpyF3I	CTNAG	4 cut(s)	389, 687, 768, 1440
HpySE526I	ACGT	2 cut(s)	545, 1120
Hsp92I	GRCGYC	1 cut(s)	373
HspAI	GCGC	2 cut(s)	373, 691
KasI	GGCGCC	1 cut(s)	372
Kzo9I	GATC	8 cut(s)	345, 714, 718, 868, 903, 975, 1176, 1207
LguI	GCTCTTC	2 cut(s)	472, 990
LmnI	GCTCC	5 cut(s)	945, 1005, 1194, 1399, 1407
Lsp1109I	GCAGC	4 cut(s)	268, 425, 469, 649
LweI	GCATC	1 cut(s)	976
MaeI	CTAG	6 cut(s)	32, 143, 212, 624, 896, 1364
MaeII	ACGT	2 cut(s)	545, 1120
MaeIII	GTNAC	4 cut(s)	54, 111, 526, 928
MalI	GATC	8 cut(s)	347, 716, 720, 870, 905, 977, 1178, 1209
MboI	GATC	8 cut(s)	345, 714, 718, 868, 903, 975, 1176, 1207
MboII	GAAGA	8 cut(s)	389, 397, 489, 529, 745, 1007, 1215, 1332
MfeI	CAATTG	2 cut(s)	173, 936
MflI	RGATCY	1 cut(s)	1207
MhlI	GDGCHC	6 cut(s)	750, 960, 1002, 1137, 1299, 1404
MlsI	TGGCCA	2 cut(s)	23, 179
MluCI	AATT	9 cut(s)	123, 173, 283, 936, 1057, 1238, 1340, 1356, 1444
MluNI	TGGCCA	2 cut(s)	23, 179
Mly113I	GGCGCC	1 cut(s)	373
MlyI	GAGTC	1 cut(s)	13
MmeI	TCCRAC	2 cut(s)	193, 666
Mox20I	TGGCCA	2 cut(s)	23, 179
MscI	TGGCCA	2 cut(s)	23, 179
MseI	TTAA	6 cut(s)	11, 510, 695, 821, 1392, 1454
MslI	CAYNNNNRTG	2 cut(s)	753, 905
Msp20I	TGGCCA	2 cut(s)	23, 179
MspA1I	CMGCKG	1 cut(s)	438
MspI	CCGG	6 cut(s)	102, 728, 1100, 1279, 1332, 1410
MspR9I	CCNGG	5 cut(s)	102, 728, 1100, 1280, 1332
MunI	CAATTG	2 cut(s)	173, 936
MwoI	GCNNNNNNNGC	4 cut(s)	339, 964, 1345, 1486
NarI	GGCGCC	1 cut(s)	373
NciI	CCSGG	5 cut(s)	102, 728, 1100, 1280, 1332
NdeI	CATATG	1 cut(s)	138
NdeII	GATC	8 cut(s)	345, 714, 718, 868, 903, 975, 1176, 1207
NlaIV	GGNNCC	2 cut(s)	374, 947
NmeAIII	GCCGAG	1 cut(s)	979
NmuCI	GTSAC	4 cut(s)	54, 111, 526, 928
NspI	RCATGY	3 cut(s)	758, 811, 1417
PaeI	GCATGC	1 cut(s)	1417
PagI	TCATGA	2 cut(s)	274, 978
PciI	ACATGT	2 cut(s)	754, 807
PciSI	GCTCTTC	2 cut(s)	472, 990
PfeI	GAWTC	1 cut(s)	1124
PflMI	CCANNNNNTGG	4 cut(s)	125, 175, 1009, 1030
PfoI	TCCNGGA	1 cut(s)	726
PkrI	GCNGC	6 cut(s)	258, 437, 440, 484, 664, 913
PleI	GAGTC	1 cut(s)	12
PluTI	GGCGCC	1 cut(s)	376
PmaCI	CACGTG	1 cut(s)	1121
PmlI	CACGTG	1 cut(s)	1121
PpsI	GAGTC	1 cut(s)	12
Ppu21I	YACGTR	1 cut(s)	1121
PscI	ACATGT	2 cut(s)	754, 807
Psp124BI	GAGCTC	4 cut(s)	960, 1002, 1299, 1404
PspCI	CACGTG	1 cut(s)	1121
PspN4I	GGNNCC	2 cut(s)	374, 947
PspPI	GGNCC	4 cut(s)	104, 362, 1021, 1381
PsuI	RGATCY	1 cut(s)	1207
RsaI	GTAC	2 cut(s)	320, 1107
RsaNI	GTAC	2 cut(s)	319, 1106
RseI	CAYNNNNRTG	2 cut(s)	753, 905
SacI	GAGCTC	4 cut(s)	960, 1002, 1299, 1404
SapI	GCTCTTC	2 cut(s)	472, 990
SaqAI	TTAA	6 cut(s)	11, 510, 695, 821, 1392, 1454
SatI	GCNGC	6 cut(s)	257, 436, 439, 483, 663, 912
Sau3AI	GATC	8 cut(s)	345, 714, 718, 868, 903, 975, 1176, 1207
Sau96I	GGNCC	4 cut(s)	104, 362, 1021, 1381
SchI	GAGTC	1 cut(s)	13
ScrFI	CCNGG	5 cut(s)	102, 728, 1100, 1280, 1332
SduI	GDGCHC	6 cut(s)	750, 960, 1002, 1137, 1299, 1404
SfaNI	GCATC	1 cut(s)	976
SfcI	CTRYAG	1 cut(s)	228
SfoI	GGCGCC	1 cut(s)	374
SinI	GGWCC	3 cut(s)	362, 1021, 1381
SmiMI	CAYNNNNRTG	2 cut(s)	753, 905
SmlI	CTYRAG	3 cut(s)	961, 1063, 1422
SmoI	CTYRAG	3 cut(s)	961, 1063, 1422
SphI	GCATGC	1 cut(s)	1417
Sse9I	AATT	9 cut(s)	123, 173, 283, 936, 1057, 1238, 1340, 1356, 1444
SsiI	CCGC	4 cut(s)	436, 911, 1387, 1396
SspDI	GGCGCC	1 cut(s)	372
SspMI	CTAG	6 cut(s)	32, 143, 212, 624, 896, 1364
SstI	GAGCTC	4 cut(s)	960, 1002, 1299, 1404
StyD4I	CCNGG	5 cut(s)	100, 726, 1098, 1278, 1330
StyI	CCWWGG	1 cut(s)	971
TaaI	ACNGT	4 cut(s)	362, 613, 1377, 1499
TaiI	ACGT	2 cut(s)	548, 1123
TaqI	TCGA	6 cut(s)	160, 431, 475, 717, 871, 1146
TaqII	GACCGA	2 cut(s)	99, 916
TasI	AATT	9 cut(s)	123, 173, 283, 936, 1057, 1238, 1340, 1356, 1444
TauI	GCSGC	2 cut(s)	438, 914
TfiI	GAWTC	1 cut(s)	1124
Tru1I	TTAA	6 cut(s)	11, 510, 695, 821, 1392, 1454
Tru9I	TTAA	6 cut(s)	11, 510, 695, 821, 1392, 1454
TscAI	CASTG	1 cut(s)	120
TseFI	GTSAC	4 cut(s)	54, 111, 526, 928
TseI	GCWGC	4 cut(s)	256, 438, 482, 662
Tsp45I	GTSAC	4 cut(s)	54, 111, 526, 928
TspDTI	ATGAA	5 cut(s)	193, 389, 398, 807, 995
TspGWI	ACGGA	1 cut(s)	1207
TspRI	CASTG	1 cut(s)	120
Van91I	CCANNNNNTGG	4 cut(s)	125, 175, 1009, 1030
VpaK11BI	GGWCC	3 cut(s)	362, 1021, 1381
XapI	RAATTY	2 cut(s)	1238, 1444
XceI	RCATGY	3 cut(s)	758, 811, 1417
XmiI	GTMKAC	1 cut(s)	804
XspI	CTAG	6 cut(s)	32, 143, 212, 624, 896, 1364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.