Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000282

Physical Location & Seq

Genomic Coordinates Reverse (-)

62113476 .. 62115800

Gene Structure 2325 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00269200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGCCTTTGGTCACTCATCTCTGCTTCCTCCAAATCAAAACACAAAAAACTACCACCCGGCCCTCTGTCACTGCCAATAATCGGAAATCTCCACATGCTAGGCAACCTCCCCATCGAAGCCTCCAACACCTGGCCAAAAAATATGGACACATCATGTCCATCCGTCTAGGCAGTGTTCCGACCATAGTAGTCTCCTCCCCCAAAGCCGCAGAGCTATTCCTCAAAACTCATGACACTAATTTCGCCAGCCGGCCCAAAATCCAAGCCTCGGAGTACATATCCTACGGCACAAAGGGCATGGCCTTTTCCGAATATGGTCCCTATTGGCGCCATGTAAGGAAGCTCTGCACGCTTCAGCTTTTCTGTCCAGCAAAAATAGAGGCTTTCGCGCCTCTGAGAAAGGATGAGCTGGGAGTGCTGCTGAGAAAGCTCAAGAAAGCTGCAGAGGAAGGTGGTGTTGTGGATGTTAATGAGGATATTGGTGTGATGAATGAGGACATTACGTACAGGATGGTGTTGGGTTGTAAAAGGGATGATCAGTTTGATTTGAAAGCCATTGTTGAGGAAACGTTTTTCTTGGCCGGGGCTTTCAATATATCTGATTTTGTTCCTTCCCTTGCTGCACTTGATATTCAGTTTACACATAAGATAATTGAGAAAATAATGTATTTTGTTGAGCCGTCCCCTGCTCACAGTGAAGCATTTGTTGCCTTCCTGCTAAAGTTTAGCAAGGGGTTAACTAAGCGAATGAAGAAAGTTAGCAAGACGATCGATCAGCTCTTGGAGAAGGTAATTGACGACCATGAACAAGTTGCTAGAACTACGAGTGGGAAACAAGGCAAGCATGAGGACTTTGTAGACGTCTTGCTTTCATTAATGAACCAACCGTTGAACCCGAATGATGAGCAAGTTCATTTTCTTGATCGAACAAATGTGAAAGCCATCTTACTAGACATGCTTACGGCGGCTTCTGATACTTCGGCCTCATCGATTGTTTGGAGCCTTTCCGAGCTCTTAAGGCATCCAAGGGTCATGAAGAAACTCCAAAAAGAGCTCCAAACTGTGGTTGGCATGGACCGAATGGTGGAAGAGACTGATTTGCCAAAGCTGGATTACTTGAGTATGGTGGTCAAGGAGAGCTTCAGACTACACCCAGTTGGACCATTACTAATCCCACATGAATCTATCGAGGACATTGCAATAGATGGATACGACATACCTAAGAAGTCGCGGATCATTGTAAACATCTGGAGCATTGGAAGAGATCCTAGTGTATGGTCAGAAAATGTTGAGGAATTTTATCCTGAAAGGTTCATGAACAACAATATAGACCTCCGGGGACATGACTTTCAGCTCATCCCATTTGGGTCTGGCCGAAGAGGTTGTCCAGGTCTGCAATTAGGGCTAACCATAGTTCGGATAGTTCTAGCACAGCTGGTGCACTGCTTTAACTGGGAGCTCCCAACTGGCATGCTACCTCAAGACTTGGACATGTCTGAGAAATTCGGTTTATCAATGTCGAAGGCCAAACACTTGCTTGCCAAGCCGACCTACCGTCTTCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0055114 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

521

Amino Acids

59.07

Weight (kDa)

8.77

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	34 - 511	1.7e-96	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000282)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica	MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica	Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis	pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis	RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata	RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora	Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa	Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha	Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana	Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	864
AccB1I	GGYRCC	1 cut(s)	327
AccB7I	CCANNNNNTGG	2 cut(s)	130, 1063
AccI	GTMKAC	1 cut(s)	858
AccII	CGCG	2 cut(s)	389, 1231
AciI	CCGC	3 cut(s)	207, 965, 1231
AclI	AACGTT	1 cut(s)	569
AclWI	GGATC	2 cut(s)	1241, 1259
AcoI	YGGCCR	3 cut(s)	132, 579, 1372
AcsI	RAATTY	2 cut(s)	1295, 1502
AcuI	CTGAAG	2 cut(s)	338, 1126
AcyI	GRCGYC	2 cut(s)	328, 861
AfaI	GTAC	2 cut(s)	275, 506
AfiI	CCNNNNNNNGG	6 cut(s)	81, 130, 268, 1063, 1084, 1416
AflII	CTTAAG	1 cut(s)	1015
AflIII	ACRYGT	1 cut(s)	1491
AgsI	TTSAA	3 cut(s)	550, 592, 892
AhdI	GACNNNNNGTC	1 cut(s)	1554
AjnI	CCWGG	2 cut(s)	129, 1387
Alw21I	GWGCWC	4 cut(s)	1014, 1056, 1443, 1461
Alw26I	GTCTC	2 cut(s)	196, 1085
Alw44I	GTGCAC	1 cut(s)	1439
AlwI	GGATC	2 cut(s)	1241, 1259
AoxI	GGCC	8 cut(s)	59, 132, 251, 300, 579, 981, 1372, 1524
ApaLI	GTGCAC	1 cut(s)	1439
ApeKI	GCWGC	3 cut(s)	418, 440, 620
ApoI	RAATTY	2 cut(s)	1295, 1502
ArsI	GACNNNNNNTTYG	4 cut(s)	224, 256, 1369, 1401
AseI	ATTAAT	1 cut(s)	875
AspLEI	GCGC	2 cut(s)	330, 391
AspS9I	GGNCC	5 cut(s)	60, 252, 317, 1075, 1160
AsuC2I	CCSGG	3 cut(s)	58, 583, 1337
AvaII	GGWCC	3 cut(s)	317, 1075, 1160
BaeGI	GKGCMC	1 cut(s)	1443
BalI	TGGCCA	1 cut(s)	134
BanI	GGYRCC	1 cut(s)	327
BanII	GRGCYC	3 cut(s)	1014, 1056, 1461
BbsI	GAAGAC	1 cut(s)	1550
Bbv12I	GWGCWC	4 cut(s)	1014, 1056, 1443, 1461
BbvI	GCAGC	3 cut(s)	405, 427, 607
BccI	CCATC	5 cut(s)	120, 167, 505, 950, 1199
BceAI	ACGGC	3 cut(s)	301, 664, 978
BcgI	CGANNNNNNTGC	4 cut(s)	751, 785, 1178, 1212
BciT130I	CCWGG	2 cut(s)	131, 1389
BciVI	GTATCC	1 cut(s)	1202
BclI	TGATCA	1 cut(s)	535
BcnI	CCSGG	3 cut(s)	58, 583, 1337
BcoDI	GTCTC	2 cut(s)	196, 1085
BfaI	CTAG	6 cut(s)	99, 167, 816, 950, 1269, 1427
BfmI	CTRYAG	2 cut(s)	441, 1562
BfoI	RGCGCY	1 cut(s)	331
BfrI	CTTAAG	1 cut(s)	1015
BfuI	GTATCC	1 cut(s)	1202
BisI	GCNGC	5 cut(s)	207, 419, 441, 621, 966
BlsI	GCNGC	5 cut(s)	208, 420, 442, 622, 967
Bme1390I	CCNGG	5 cut(s)	58, 131, 583, 1337, 1389
Bme18I	GGWCC	3 cut(s)	317, 1075, 1160
BmeRI	GACNNNNNGTC	1 cut(s)	1554
BmgT120I	GGNCC	5 cut(s)	60, 252, 317, 1075, 1160
BmiI	GGNNCC	3 cut(s)	319, 329, 1001
BmrFI	CCNGG	5 cut(s)	58, 131, 583, 1337, 1389
BmrI	ACTGGG	2 cut(s)	1148, 1462
BmsI	GCATC	1 cut(s)	1030
BmuI	ACTGGG	2 cut(s)	1148, 1462
BpiI	GAAGAC	1 cut(s)	1550
BpmI	CTGGAG	1 cut(s)	1270
BpuEI	CTTGAG	3 cut(s)	416, 1138, 1464
BpuMI	CCSGG	3 cut(s)	58, 583, 1337
Bsa29I	ATCGAT	2 cut(s)	771, 989
BsaAI	YACGTR	1 cut(s)	504
BsaHI	GRCGYC	2 cut(s)	328, 861
BsaJI	CCNNGG	4 cut(s)	267, 582, 1025, 1336
Bsc4I	CCNNNNNNNGG	6 cut(s)	81, 130, 268, 1063, 1084, 1416
Bse118I	RCCGGY	1 cut(s)	249
Bse1I	ACTGG	3 cut(s)	1154, 1457, 1471
Bse3DI	GCAATG	1 cut(s)	1194
BseBI	CCWGG	2 cut(s)	131, 1389
BseCI	ATCGAT	2 cut(s)	771, 989
BseDI	CCNNGG	4 cut(s)	267, 582, 1025, 1336
BseGI	GGATG	7 cut(s)	159, 409, 469, 516, 538, 1021, 1356
BseLI	CCNNNNNNNGG	6 cut(s)	81, 130, 268, 1063, 1084, 1416
BseMI	GCAATG	1 cut(s)	1194
BseMII	CTCAG	3 cut(s)	386, 413, 1488
BseNI	ACTGG	3 cut(s)	1154, 1457, 1471
BseRI	GAGGAG	1 cut(s)	184
BseSI	GKGCMC	1 cut(s)	1443
BseXI	GCAGC	3 cut(s)	405, 427, 607
BseYI	CCCAGC	1 cut(s)	409
BsgI	GTGCAG	2 cut(s)	331, 606
Bsh1236I	CGCG	2 cut(s)	389, 1231
Bsh1285I	CGRYCG	1 cut(s)	771
BshFI	GGCC	8 cut(s)	61, 134, 253, 302, 581, 983, 1374, 1526
BshNI	GGYRCC	1 cut(s)	327
BshVI	ATCGAT	2 cut(s)	771, 989
BsiEI	CGRYCG	1 cut(s)	771
BsiHKAI	GWGCWC	4 cut(s)	1014, 1056, 1443, 1461
BsiSI	CCGG	4 cut(s)	58, 250, 582, 1336
BslFI	GGGAC	3 cut(s)	303, 667, 1353
BslI	CCNNNNNNNGG	6 cut(s)	81, 130, 268, 1063, 1084, 1416
BsmAI	GTCTC	2 cut(s)	196, 1085
BsmFI	GGGAC	3 cut(s)	303, 667, 1353
BsnI	GGCC	8 cut(s)	61, 134, 253, 302, 581, 983, 1374, 1526
Bsp1286I	GDGCHC	4 cut(s)	1014, 1056, 1443, 1461
Bsp143I	GATC	6 cut(s)	535, 768, 772, 922, 1233, 1264
BspACI	CCGC	3 cut(s)	207, 965, 1231
BspANI	GGCC	8 cut(s)	61, 134, 253, 302, 581, 983, 1374, 1526
BspCNI	CTCAG	3 cut(s)	387, 414, 1489
BspDI	ATCGAT	2 cut(s)	771, 989
BspFNI	CGCG	2 cut(s)	389, 1231
BspHI	TCATGA	3 cut(s)	229, 1032, 1314
BspLI	GGNNCC	3 cut(s)	319, 329, 1001
BspMAI	CTGCAG	1 cut(s)	445
BspPI	GGATC	2 cut(s)	1241, 1259
BspT107I	GGYRCC	1 cut(s)	327
BspTI	CTTAAG	1 cut(s)	1015
BsrDI	GCAATG	1 cut(s)	1194
BsrFI	RCCGGY	1 cut(s)	249
BsrI	ACTGG	3 cut(s)	1154, 1457, 1471
BssAI	RCCGGY	1 cut(s)	249
BssECI	CCNNGG	4 cut(s)	267, 582, 1025, 1336
BssMI	GATC	6 cut(s)	535, 768, 772, 922, 1233, 1264
BssNI	GRCGYC	2 cut(s)	328, 861
BssT1I	CCWWGG	1 cut(s)	1025
Bst2UI	CCWGG	2 cut(s)	131, 1389
Bst4CI	ACNGT	4 cut(s)	695, 888, 1063, 1556
Bst6I	CTCTTC	3 cut(s)	1083, 1255, 1372
BstACI	GRCGYC	2 cut(s)	328, 861
BstAFI	CTTAAG	1 cut(s)	1015
BstAPI	GCANNNNNTGC	1 cut(s)	707
BstBAI	YACGTR	1 cut(s)	504
BstC8I	GCNNGC	6 cut(s)	247, 251, 350, 842, 1472, 1539
BstDEI	CTNAG	5 cut(s)	395, 422, 741, 1221, 1497
BstF5I	GGATG	7 cut(s)	159, 409, 469, 516, 538, 1021, 1356
BstFNI	CGCG	2 cut(s)	389, 1231
BstH2I	RGCGCY	1 cut(s)	331
BstHHI	GCGC	2 cut(s)	330, 391
BstKTI	GATC	6 cut(s)	538, 771, 775, 925, 1236, 1267
BstMAI	GTCTC	2 cut(s)	196, 1085
BstMBI	GATC	6 cut(s)	535, 768, 772, 922, 1233, 1264
BstMCI	CGRYCG	1 cut(s)	771
BstMWI	GCNNNNNNNGC	8 cut(s)	294, 349, 415, 427, 707, 1018, 1402, 1543
BstNI	CCWGG	2 cut(s)	131, 1389
BstNSI	RCATGY	4 cut(s)	98, 958, 1474, 1495
BstSCI	CCNGG	5 cut(s)	56, 129, 581, 1335, 1387
BstSFI	CTRYAG	2 cut(s)	441, 1562
BstSLI	GKGCMC	1 cut(s)	1443
BstSNI	TACGTA	1 cut(s)	504
BstUI	CGCG	2 cut(s)	389, 1231
BstV1I	GCAGC	3 cut(s)	405, 427, 607
BstV2I	GAAGAC	1 cut(s)	1550
BstX2I	RGATCY	1 cut(s)	1264
BstYI	RGATCY	1 cut(s)	1264
Bsu15I	ATCGAT	2 cut(s)	771, 989
BsuI	GTATCC	1 cut(s)	1202
BsuRI	GGCC	8 cut(s)	61, 134, 253, 302, 581, 983, 1374, 1526
BsuTUI	ATCGAT	2 cut(s)	771, 989
BtsCI	GGATG	7 cut(s)	159, 409, 469, 516, 538, 1021, 1356
BtsI	GCAGTG	3 cut(s)	69, 178, 1441
BtsIMutI	CAGTG	4 cut(s)	69, 178, 700, 1441
Cac8I	GCNNGC	6 cut(s)	247, 251, 350, 842, 1472, 1539
CciI	TCATGA	3 cut(s)	229, 1032, 1314
CfoI	GCGC	2 cut(s)	330, 391
Cfr10I	RCCGGY	1 cut(s)	249
Cfr13I	GGNCC	5 cut(s)	60, 252, 317, 1075, 1160
ClaI	ATCGAT	2 cut(s)	771, 989
Csp6I	GTAC	2 cut(s)	274, 505
CviQI	GTAC	2 cut(s)	274, 505
DdeI	CTNAG	5 cut(s)	395, 422, 741, 1221, 1497
DinI	GGCGCC	1 cut(s)	329
DpnI	GATC	6 cut(s)	537, 770, 774, 924, 1235, 1266
DpnII	GATC	6 cut(s)	535, 768, 772, 922, 1233, 1264
DriI	GACNNNNNGTC	1 cut(s)	1554
EaeI	YGGCCR	3 cut(s)	132, 579, 1372
Eam1104I	CTCTTC	3 cut(s)	1083, 1255, 1372
Eam1105I	GACNNNNNGTC	1 cut(s)	1554
EarI	CTCTTC	3 cut(s)	1083, 1255, 1372
Ecl136II	GAGCTC	3 cut(s)	1012, 1054, 1459
Eco105I	TACGTA	1 cut(s)	504
Eco130I	CCWWGG	1 cut(s)	1025
Eco24I	GRGCYC	3 cut(s)	1014, 1056, 1461
Eco47I	GGWCC	3 cut(s)	317, 1075, 1160
Eco53kI	GAGCTC	3 cut(s)	1012, 1054, 1459
Eco57I	CTGAAG	2 cut(s)	338, 1126
EcoICRI	GAGCTC	3 cut(s)	1012, 1054, 1459
EcoRII	CCWGG	2 cut(s)	129, 1387
EcoT14I	CCWWGG	1 cut(s)	1025
EcoT38I	GRGCYC	3 cut(s)	1014, 1056, 1461
EgeI	GGCGCC	1 cut(s)	329
EheI	GGCGCC	1 cut(s)	329
ErhI	CCWWGG	1 cut(s)	1025
FalI	AAGNNNNNCTT	2 cut(s)	1124, 1156
FaqI	GGGAC	3 cut(s)	303, 667, 1353
FbaI	TGATCA	1 cut(s)	535
FblI	GTMKAC	1 cut(s)	858
Fnu4HI	GCNGC	5 cut(s)	207, 419, 441, 621, 966
FokI	GGATG	7 cut(s)	146, 416, 476, 523, 545, 1008, 1343
FriOI	GRGCYC	3 cut(s)	1014, 1056, 1461
Fsp4HI	GCNGC	5 cut(s)	207, 419, 441, 621, 966
FspBI	CTAG	6 cut(s)	99, 167, 816, 950, 1269, 1427
GlaI	GCGC	2 cut(s)	329, 390
GluI	GCNGC	5 cut(s)	207, 419, 441, 621, 966
GsaI	CCCAGC	1 cut(s)	413
GsuI	CTGGAG	1 cut(s)	1270
HaeII	RGCGCY	1 cut(s)	331
HaeIII	GGCC	8 cut(s)	61, 134, 253, 302, 581, 983, 1374, 1526
HapII	CCGG	4 cut(s)	58, 250, 582, 1336
HhaI	GCGC	2 cut(s)	330, 391
Hin1I	GRCGYC	2 cut(s)	328, 861
Hin6I	GCGC	2 cut(s)	328, 389
HinP1I	GCGC	2 cut(s)	328, 389
HincII	GTYRAC	1 cut(s)	738
HindII	GTYRAC	1 cut(s)	738
HinfI	GANTC	1 cut(s)	1181
HpaI	GTTAAC	1 cut(s)	738
HpaII	CCGG	4 cut(s)	58, 250, 582, 1336
Hpy166II	GTNNAC	5 cut(s)	639, 738, 859, 1243, 1441
Hpy188III	TCNNGA	8 cut(s)	230, 433, 920, 1033, 1249, 1304, 1315, 1481
Hpy8I	GTNNAC	5 cut(s)	639, 738, 859, 1243, 1441
HpyAV	CCTTC	5 cut(s)	443, 621, 721, 781, 1516
HpyCH4III	ACNGT	4 cut(s)	695, 888, 1063, 1556
HpyCH4IV	ACGT	3 cut(s)	503, 569, 861
HpyCH4V	TGCA	6 cut(s)	348, 443, 623, 1199, 1396, 1441
HpyF10VI	GCNNNNNNNGC	8 cut(s)	294, 349, 415, 427, 707, 1018, 1402, 1543
HpyF3I	CTNAG	5 cut(s)	395, 422, 741, 1221, 1497
HpySE526I	ACGT	3 cut(s)	503, 569, 861
Hsp92I	GRCGYC	2 cut(s)	328, 861
HspAI	GCGC	2 cut(s)	328, 389
KasI	GGCGCC	1 cut(s)	327
KroI	GCCGGC	1 cut(s)	249
KroNI	GCCGGC	1 cut(s)	251
Ksp22I	TGATCA	1 cut(s)	535
KspAI	GTTAAC	1 cut(s)	738
Kzo9I	GATC	6 cut(s)	535, 768, 772, 922, 1233, 1264
LmnI	GCTCC	5 cut(s)	999, 1059, 1251, 1456, 1464
Lsp1109I	GCAGC	3 cut(s)	405, 427, 607
LweI	GCATC	1 cut(s)	1030
MaeI	CTAG	6 cut(s)	99, 167, 816, 950, 1269, 1427
MaeII	ACGT	3 cut(s)	503, 569, 861
MaeIII	GTNAC	2 cut(s)	10, 67
MalI	GATC	6 cut(s)	537, 770, 774, 924, 1235, 1266
MboI	GATC	6 cut(s)	535, 768, 772, 922, 1233, 1264
MboII	GAAGA	6 cut(s)	763, 1048, 1100, 1272, 1389, 1550
MflI	RGATCY	1 cut(s)	1264
MhlI	GDGCHC	4 cut(s)	1014, 1056, 1443, 1461
MlsI	TGGCCA	1 cut(s)	134
MluCI	AATT	6 cut(s)	238, 651, 792, 1295, 1397, 1502
MluNI	TGGCCA	1 cut(s)	134
Mly113I	GGCGCC	1 cut(s)	328
MmeI	TCCRAC	3 cut(s)	148, 203, 1138
Mox20I	TGGCCA	1 cut(s)	134
MroNI	GCCGGC	1 cut(s)	249
MscI	TGGCCA	1 cut(s)	134
MseI	TTAA	5 cut(s)	468, 737, 875, 1016, 1449
Msp20I	TGGCCA	1 cut(s)	134
MspA1I	CMGCKG	1 cut(s)	1435
MspCI	CTTAAG	1 cut(s)	1015
MspI	CCGG	4 cut(s)	58, 250, 582, 1336
MspR9I	CCNGG	5 cut(s)	58, 131, 583, 1337, 1389
MvaI	CCWGG	2 cut(s)	131, 1389
MvnI	CGCG	2 cut(s)	389, 1231
MwoI	GCNNNNNNNGC	8 cut(s)	294, 349, 415, 427, 707, 1018, 1402, 1543
NaeI	GCCGGC	1 cut(s)	251
NarI	GGCGCC	1 cut(s)	328
NciI	CCSGG	3 cut(s)	58, 583, 1337
NdeII	GATC	6 cut(s)	535, 768, 772, 922, 1233, 1264
NgoMIV	GCCGGC	1 cut(s)	249
NlaIV	GGNNCC	3 cut(s)	319, 329, 1001
NmuCI	GTSAC	2 cut(s)	10, 67
NspI	RCATGY	4 cut(s)	98, 958, 1474, 1495
PaeI	GCATGC	1 cut(s)	1474
PagI	TCATGA	3 cut(s)	229, 1032, 1314
PciI	ACATGT	1 cut(s)	1491
PcsI	WCGNNNNNNNCGW	1 cut(s)	986
PdiI	GCCGGC	1 cut(s)	251
PfeI	GAWTC	1 cut(s)	1181
PflMI	CCANNNNNTGG	2 cut(s)	130, 1063
PkrI	GCNGC	5 cut(s)	208, 420, 442, 622, 967
Ple19I	CGATCG	1 cut(s)	771
PluTI	GGCGCC	1 cut(s)	331
Ppu21I	YACGTR	1 cut(s)	504
PscI	ACATGT	1 cut(s)	1491
PshBI	ATTAAT	1 cut(s)	875
Psp124BI	GAGCTC	3 cut(s)	1014, 1056, 1461
Psp1406I	AACGTT	1 cut(s)	569
Psp6I	CCWGG	2 cut(s)	129, 1387
PspFI	CCCAGC	1 cut(s)	409
PspGI	CCWGG	2 cut(s)	129, 1387
PspN4I	GGNNCC	3 cut(s)	319, 329, 1001
PspPI	GGNCC	5 cut(s)	60, 252, 317, 1075, 1160
PstI	CTGCAG	1 cut(s)	445
PsuI	RGATCY	1 cut(s)	1264
PvuI	CGATCG	1 cut(s)	771
PvuII	CAGCTG	1 cut(s)	1435
RsaI	GTAC	2 cut(s)	275, 506
RsaNI	GTAC	2 cut(s)	274, 505
SacI	GAGCTC	3 cut(s)	1014, 1056, 1461
SaqAI	TTAA	5 cut(s)	468, 737, 875, 1016, 1449
SatI	GCNGC	5 cut(s)	207, 419, 441, 621, 966
Sau3AI	GATC	6 cut(s)	535, 768, 772, 922, 1233, 1264
Sau96I	GGNCC	5 cut(s)	60, 252, 317, 1075, 1160
ScrFI	CCNGG	5 cut(s)	58, 131, 583, 1337, 1389
SduI	GDGCHC	4 cut(s)	1014, 1056, 1443, 1461
SfaNI	GCATC	1 cut(s)	1030
SfcI	CTRYAG	2 cut(s)	441, 1562
SfoI	GGCGCC	1 cut(s)	329
SinI	GGWCC	3 cut(s)	317, 1075, 1160
SmlI	CTYRAG	4 cut(s)	431, 1015, 1117, 1479
SmoI	CTYRAG	4 cut(s)	431, 1015, 1117, 1479
SnaBI	TACGTA	1 cut(s)	504
SphI	GCATGC	1 cut(s)	1474
Sse9I	AATT	6 cut(s)	238, 651, 792, 1295, 1397, 1502
SsiI	CCGC	3 cut(s)	207, 965, 1231
SspDI	GGCGCC	1 cut(s)	327
SspMI	CTAG	6 cut(s)	99, 167, 816, 950, 1269, 1427
SstI	GAGCTC	3 cut(s)	1014, 1056, 1461
StyD4I	CCNGG	5 cut(s)	56, 129, 581, 1335, 1387
StyI	CCWWGG	1 cut(s)	1025
TaaI	ACNGT	4 cut(s)	695, 888, 1063, 1556
TaiI	ACGT	3 cut(s)	506, 572, 864
TaqI	TCGA	6 cut(s)	115, 771, 925, 989, 1188, 1520
TaqII	GACCGA	1 cut(s)	1092
TasI	AATT	6 cut(s)	238, 651, 792, 1295, 1397, 1502
TatI	WGTACW	1 cut(s)	273
TauI	GCSGC	2 cut(s)	209, 968
TfiI	GAWTC	1 cut(s)	1181
Tru1I	TTAA	5 cut(s)	468, 737, 875, 1016, 1449
Tru9I	TTAA	5 cut(s)	468, 737, 875, 1016, 1449
TscAI	CASTG	4 cut(s)	76, 178, 700, 1448
TseFI	GTSAC	2 cut(s)	10, 67
TseI	GCWGC	3 cut(s)	418, 440, 620
Tsp45I	GTSAC	2 cut(s)	10, 67
TspGWI	ACGGA	1 cut(s)	152
TspRI	CASTG	4 cut(s)	76, 178, 700, 1448
Van91I	CCANNNNNTGG	2 cut(s)	130, 1063
Vha464I	CTTAAG	1 cut(s)	1015
VneI	GTGCAC	1 cut(s)	1439
VpaK11BI	GGWCC	3 cut(s)	317, 1075, 1160
VspI	ATTAAT	1 cut(s)	875
XapI	RAATTY	2 cut(s)	1295, 1502
XceI	RCATGY	4 cut(s)	98, 958, 1474, 1495
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1064
XmiI	GTMKAC	1 cut(s)	858
XspI	CTAG	6 cut(s)	99, 167, 816, 950, 1269, 1427
ZraI	GACGTC	1 cut(s)	862

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.