Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0000282

Physical Location & Seq

Genomic Coordinates Forward (+)

17145402 .. 17146848

Gene Structure 1447 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G219800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 696 bp

ATGATTGCTTCAGCAATAGCCATCATCCTCCTCTTTCTTACCTTCCTCTGGTCTCTCATCCAGAGGCCAAGATACCAAAAACTGCCTCCTGGTCCTTGGGCGCTGCCAGTCATTGGTAATCTCCATATGCTAGGCAACCTCCCACACCGCAGCCTCCGAGACCTGGCCAAAAAATATGGACCCATAATGTCCATGCGTCTAGGCACCAAAACCACCATAGTGGTCTCATCCTCTGAAGCTGCAGAGTTATTCTTGAAAACCCATGACACCATTTTTGCCAGCCGCCCCAAAGTCCAATCCTCCGACTACTTGTCGTACGGCACAAAGGGCATGGGTTTCAGTGAATATGGTCCATACTGGCGGCATATTAGGAAGTTGTGCACTCTGCAGCTTCTTTGTCCATCAAAGATTGAGGCTTTTGCTCCATTGAGGAGGGAAGAGGTGGGTTTGTTGGTTGAGTCGCTGAAGAAAGCCGAAGCGGAGGGCCAAGTTGTGGATCTTAGTGAGAAAGTTGGTGAGCTGATTGAGAGCATAACGTATAGGATGGTGTTGGGGAGCAAAAATGATGATACGTTTGATGTGAAGGGAATTATCGAGGAGATCATGTTGTTGACAGGGGCAGTCAAGATTGGTGATTATTTGCCTTTCCTCAGTCCATTTGATTTTCAGCTTATAAGTAACTCGATTTATCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0055114 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

232

Amino Acids

25.95

Weight (kDa)

8.76

Isoelectric Point (pI)

44.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000282)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica	MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica	Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis	pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis	RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata	RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora	Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa	Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha	Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana	Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	674
AccB1I	GGYRCC	1 cut(s)	203
AccB7I	CCANNNNNTGG	2 cut(s)	113, 493
AciI	CCGC	4 cut(s)	148, 283, 361, 479
AclWI	GGATC	1 cut(s)	504
AcoI	YGGCCR	1 cut(s)	165
AcuI	CTGAAG	2 cut(s)	255, 485
AfaI	GTAC	1 cut(s)	317
AfiI	CCNNNNNNNGG	4 cut(s)	48, 113, 163, 493
AgsI	TTSAA	1 cut(s)	256
AhdI	GACNNNNNGTC	1 cut(s)	310
AjnI	CCWGG	2 cut(s)	88, 162
AleI	CACNNNNGTG	1 cut(s)	218
AluBI	AGCT	4 cut(s)	239, 391, 520, 670
AluI	AGCT	4 cut(s)	239, 391, 520, 670
Alw21I	GWGCWC	1 cut(s)	383
Alw26I	GTCTC	3 cut(s)	57, 153, 229
Alw44I	GTGCAC	1 cut(s)	379
AlwI	GGATC	1 cut(s)	504
AoxI	GGCC	3 cut(s)	65, 165, 484
ApaLI	GTGCAC	1 cut(s)	379
ApeKI	GCWGC	4 cut(s)	103, 150, 239, 388
ArsI	GACNNNNNNTTYG	2 cut(s)	257, 289
AspLEI	GCGC	1 cut(s)	103
AspS9I	GGNCC	4 cut(s)	92, 179, 350, 484
AsuHPI	GGTGA	2 cut(s)	527, 644
AvaII	GGWCC	3 cut(s)	92, 179, 350
BaeGI	GKGCMC	1 cut(s)	383
BalI	TGGCCA	1 cut(s)	167
BanI	GGYRCC	1 cut(s)	203
Bbv12I	GWGCWC	1 cut(s)	383
BbvI	GCAGC	4 cut(s)	90, 162, 226, 400
BccI	CCATC	3 cut(s)	29, 409, 538
BceAI	ACGGC	1 cut(s)	334
BciT130I	CCWGG	2 cut(s)	90, 164
BcoDI	GTCTC	3 cut(s)	57, 153, 229
BfaI	CTAG	2 cut(s)	131, 200
BfmI	CTRYAG	2 cut(s)	240, 386
BfoI	RGCGCY	1 cut(s)	104
BisI	GCNGC	6 cut(s)	104, 151, 240, 283, 362, 389
BlsI	GCNGC	6 cut(s)	105, 152, 241, 284, 363, 390
Bme1390I	CCNGG	2 cut(s)	90, 164
Bme18I	GGWCC	3 cut(s)	92, 179, 350
BmeRI	GACNNNNNGTC	1 cut(s)	310
BmgT120I	GGNCC	4 cut(s)	92, 179, 350, 484
BmiI	GGNNCC	2 cut(s)	181, 205
BmrFI	CCNGG	2 cut(s)	90, 164
BsaI	GGTCTC	3 cut(s)	57, 153, 229
BsaJI	CCNNGG	1 cut(s)	95
BsaXI	ACNNNNNCTCC	2 cut(s)	590, 620
Bsc4I	CCNNNNNNNGG	4 cut(s)	48, 113, 163, 493
Bse1I	ACTGG	2 cut(s)	107, 362
BseBI	CCWGG	2 cut(s)	90, 164
BseDI	CCNNGG	1 cut(s)	95
BseGI	GGATG	4 cut(s)	24, 57, 227, 549
BseLI	CCNNNNNNNGG	4 cut(s)	48, 113, 163, 493
BseMII	CTCAG	1 cut(s)	664
BseNI	ACTGG	2 cut(s)	107, 362
BseRI	GAGGAG	3 cut(s)	20, 445, 611
BseSI	GKGCMC	1 cut(s)	383
BseXI	GCAGC	4 cut(s)	90, 162, 226, 400
BshFI	GGCC	3 cut(s)	67, 167, 486
BshNI	GGYRCC	1 cut(s)	203
BsiHKAI	GWGCWC	1 cut(s)	383
BsiWI	CGTACG	1 cut(s)	315
BslI	CCNNNNNNNGG	4 cut(s)	48, 113, 163, 493
BsmAI	GTCTC	3 cut(s)	57, 153, 229
BsnI	GGCC	3 cut(s)	67, 167, 486
Bso31I	GGTCTC	3 cut(s)	57, 153, 229
Bsp1286I	GDGCHC	1 cut(s)	383
Bsp143I	GATC	2 cut(s)	496, 600
BspACI	CCGC	4 cut(s)	148, 283, 361, 479
BspANI	GGCC	3 cut(s)	67, 167, 486
BspCNI	CTCAG	1 cut(s)	663
BspLI	GGNNCC	2 cut(s)	181, 205
BspMAI	CTGCAG	2 cut(s)	244, 390
BspPI	GGATC	1 cut(s)	504
BspT107I	GGYRCC	1 cut(s)	203
BspTNI	GGTCTC	3 cut(s)	57, 153, 229
BsrI	ACTGG	2 cut(s)	107, 362
BssECI	CCNNGG	1 cut(s)	95
BssMI	GATC	2 cut(s)	496, 600
BssT1I	CCWWGG	1 cut(s)	95
Bst2UI	CCWGG	2 cut(s)	90, 164
Bst6I	CTCTTC	1 cut(s)	432
BstC8I	GCNNGC	1 cut(s)	280
BstDEI	CTNAG	2 cut(s)	500, 650
BstF5I	GGATG	4 cut(s)	24, 57, 227, 549
BstH2I	RGCGCY	1 cut(s)	104
BstHHI	GCGC	1 cut(s)	103
BstKTI	GATC	2 cut(s)	499, 603
BstMAI	GTCTC	3 cut(s)	57, 153, 229
BstMBI	GATC	2 cut(s)	496, 600
BstMWI	GCNNNNNNNGC	1 cut(s)	327
BstNI	CCWGG	2 cut(s)	90, 164
BstSCI	CCNGG	2 cut(s)	88, 162
BstSFI	CTRYAG	2 cut(s)	240, 386
BstSLI	GKGCMC	1 cut(s)	383
BstV1I	GCAGC	4 cut(s)	90, 162, 226, 400
BstX2I	RGATCY	1 cut(s)	496
BstXI	CCANNNNNNTGG	1 cut(s)	220
BstYI	RGATCY	1 cut(s)	496
BsuRI	GGCC	3 cut(s)	67, 167, 486
BtsCI	GGATG	4 cut(s)	24, 57, 227, 549
BtsIMutI	CAGTG	1 cut(s)	346
Cac8I	GCNNGC	1 cut(s)	280
CfoI	GCGC	1 cut(s)	103
Cfr13I	GGNCC	4 cut(s)	92, 179, 350, 484
CseI	GACGC	1 cut(s)	185
Csp6I	GTAC	1 cut(s)	316
CviAII	CATG	4 cut(s)	193, 263, 331, 604
CviQI	GTAC	1 cut(s)	316
DdeI	CTNAG	2 cut(s)	500, 650
DpnI	GATC	2 cut(s)	498, 602
DpnII	GATC	2 cut(s)	496, 600
DriI	GACNNNNNGTC	1 cut(s)	310
EaeI	YGGCCR	1 cut(s)	165
Eam1104I	CTCTTC	1 cut(s)	432
Eam1105I	GACNNNNNGTC	1 cut(s)	310
EarI	CTCTTC	1 cut(s)	432
Eco130I	CCWWGG	1 cut(s)	95
Eco31I	GGTCTC	3 cut(s)	57, 153, 229
Eco47I	GGWCC	3 cut(s)	92, 179, 350
Eco57I	CTGAAG	2 cut(s)	255, 485
EcoRII	CCWGG	2 cut(s)	88, 162
EcoT14I	CCWWGG	1 cut(s)	95
ErhI	CCWWGG	1 cut(s)	95
FaeI	CATG	4 cut(s)	196, 266, 334, 607
FatI	CATG	4 cut(s)	192, 262, 330, 603
FauNDI	CATATG	1 cut(s)	126
Fnu4HI	GCNGC	6 cut(s)	104, 151, 240, 283, 362, 389
FokI	GGATG	4 cut(s)	11, 44, 214, 556
Fsp4HI	GCNGC	6 cut(s)	104, 151, 240, 283, 362, 389
FspBI	CTAG	2 cut(s)	131, 200
GlaI	GCGC	1 cut(s)	102
GluI	GCNGC	6 cut(s)	104, 151, 240, 283, 362, 389
HaeII	RGCGCY	1 cut(s)	104
HaeIII	GGCC	3 cut(s)	67, 167, 486
HgaI	GACGC	1 cut(s)	185
HhaI	GCGC	1 cut(s)	103
Hin1II	CATG	4 cut(s)	196, 266, 334, 607
Hin6I	GCGC	1 cut(s)	101
HinP1I	GCGC	1 cut(s)	101
HincII	GTYRAC	1 cut(s)	612
HindII	GTYRAC	1 cut(s)	612
HinfI	GANTC	1 cut(s)	458
HphI	GGTGA	2 cut(s)	527, 644
Hpy166II	GTNNAC	2 cut(s)	381, 612
Hpy188I	TCNGA	3 cut(s)	158, 235, 304
Hpy188III	TCNNGA	3 cut(s)	61, 253, 625
Hpy8I	GTNNAC	2 cut(s)	381, 612
HpyAV	CCTTC	2 cut(s)	52, 577
HpyCH4IV	ACGT	2 cut(s)	536, 572
HpyCH4V	TGCA	3 cut(s)	242, 381, 388
HpyF10VI	GCNNNNNNNGC	1 cut(s)	327
HpyF3I	CTNAG	2 cut(s)	500, 650
HpySE526I	ACGT	2 cut(s)	536, 572
Hsp92II	CATG	4 cut(s)	196, 266, 334, 607
HspAI	GCGC	1 cut(s)	101
Kzo9I	GATC	2 cut(s)	496, 600
LmnI	GCTCC	2 cut(s)	427, 555
Lsp1109I	GCAGC	4 cut(s)	90, 162, 226, 400
MaeI	CTAG	2 cut(s)	131, 200
MaeII	ACGT	2 cut(s)	536, 572
MaeIII	GTNAC	1 cut(s)	677
MalI	GATC	2 cut(s)	498, 602
MboI	GATC	2 cut(s)	496, 600
MboII	GAAGA	2 cut(s)	449, 478
MflI	RGATCY	1 cut(s)	496
MhlI	GDGCHC	1 cut(s)	383
MlsI	TGGCCA	1 cut(s)	167
MluCI	AATT	1 cut(s)	588
MluNI	TGGCCA	1 cut(s)	167
MlyI	GAGTC	1 cut(s)	467
MmeI	TCCRAC	1 cut(s)	327
Mox20I	TGGCCA	1 cut(s)	167
MscI	TGGCCA	1 cut(s)	167
MslI	CAYNNNNRTG	1 cut(s)	218
Msp20I	TGGCCA	1 cut(s)	167
MspR9I	CCNGG	2 cut(s)	90, 164
MvaI	CCWGG	2 cut(s)	90, 164
MwoI	GCNNNNNNNGC	1 cut(s)	327
NdeI	CATATG	1 cut(s)	126
NdeII	GATC	2 cut(s)	496, 600
NlaIII	CATG	4 cut(s)	196, 266, 334, 607
NlaIV	GGNNCC	2 cut(s)	181, 205
OliI	CACNNNNGTG	1 cut(s)	218
Pfl23II	CGTACG	1 cut(s)	315
PflMI	CCANNNNNTGG	2 cut(s)	113, 493
PkrI	GCNGC	6 cut(s)	105, 152, 241, 284, 363, 390
PleI	GAGTC	1 cut(s)	466
PpsI	GAGTC	1 cut(s)	466
PsiI	TTATAA	1 cut(s)	674
Psp6I	CCWGG	2 cut(s)	88, 162
PspGI	CCWGG	2 cut(s)	88, 162
PspLI	CGTACG	1 cut(s)	315
PspN4I	GGNNCC	2 cut(s)	181, 205
PspPI	GGNCC	4 cut(s)	92, 179, 350, 484
PstI	CTGCAG	2 cut(s)	244, 390
PsuI	RGATCY	1 cut(s)	496
RsaI	GTAC	1 cut(s)	317
RsaNI	GTAC	1 cut(s)	316
RseI	CAYNNNNRTG	1 cut(s)	218
SatI	GCNGC	6 cut(s)	104, 151, 240, 283, 362, 389
Sau3AI	GATC	2 cut(s)	496, 600
Sau96I	GGNCC	4 cut(s)	92, 179, 350, 484
SchI	GAGTC	1 cut(s)	467
ScrFI	CCNGG	2 cut(s)	90, 164
SduI	GDGCHC	1 cut(s)	383
SfcI	CTRYAG	2 cut(s)	240, 386
SinI	GGWCC	3 cut(s)	92, 179, 350
SmiMI	CAYNNNNRTG	1 cut(s)	218
Sse9I	AATT	1 cut(s)	588
SsiI	CCGC	4 cut(s)	148, 283, 361, 479
SspMI	CTAG	2 cut(s)	131, 200
StyD4I	CCNGG	2 cut(s)	88, 162
StyI	CCWWGG	1 cut(s)	95
TaiI	ACGT	2 cut(s)	539, 575
TaqI	TCGA	2 cut(s)	594, 683
TasI	AATT	1 cut(s)	588
TauI	GCSGC	2 cut(s)	285, 364
TscAI	CASTG	1 cut(s)	346
TseI	GCWGC	4 cut(s)	103, 150, 239, 388
TspRI	CASTG	1 cut(s)	346
Van91I	CCANNNNNTGG	2 cut(s)	113, 493
VneI	GTGCAC	1 cut(s)	379
VpaK11BI	GGWCC	3 cut(s)	92, 179, 350
XspI	CTAG	2 cut(s)	131, 200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.