RchiOBHm_Chr7g0185091

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
5329912 .. 5330155
244 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16515

Sequence Viewer

Length: 213 bp
ATGAGTCCTTCAACAATAATAGCCATCCTCCTGGTTCTCCTCACATGCCTTTGGTTACTCATCTCTGCTTCCTCCAAATCAAAACACAAAAAACTACCACCCGGCCCTCGGTCACTGCCAATAATCGGAAATCTCCACATGCTAGGCAACCTCCCCCATCGAAGCCTCCAACACCTGGCCAGAAAATATGGACACACATGTCCATCCGTCTAG

Protein Analysis

70

Amino Acids

7.66

Weight (kDa)

10.66

Isoelectric Point (pI)

68.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000282)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 198
AccB7I CCANNNNNTGG 1 cut(s) 175
AcoI YGGCCR 1 cut(s) 177
AfiI CCNNNNNNNGG 3 cut(s) 108, 125, 175
AflIII ACRYGT 1 cut(s) 197
AgsI TTSAA 1 cut(s) 12
AjnI CCWGG 2 cut(s) 30, 174
AoxI GGCC 2 cut(s) 103, 177
AspS9I GGNCC 1 cut(s) 104
AsuC2I CCSGG 1 cut(s) 102
BalI TGGCCA 1 cut(s) 179
BccI CCATC 3 cut(s) 32, 165, 211
BciT130I CCWGG 2 cut(s) 32, 176
BcnI CCSGG 1 cut(s) 102
BfaI CTAG 2 cut(s) 143, 211
Bme1390I CCNGG 3 cut(s) 32, 102, 176
BmgT120I GGNCC 1 cut(s) 104
BmrFI CCNGG 3 cut(s) 32, 102, 176
BpuMI CCSGG 1 cut(s) 102
BsaJI CCNNGG 1 cut(s) 107
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 125, 175
BseBI CCWGG 2 cut(s) 32, 176
BseDI CCNNGG 1 cut(s) 107
BseGI GGATG 2 cut(s) 24, 203
BseLI CCNNNNNNNGG 3 cut(s) 108, 125, 175
BseRI GAGGAG 1 cut(s) 29
BshFI GGCC 2 cut(s) 105, 179
BsiSI CCGG 1 cut(s) 102
BslI CCNNNNNNNGG 3 cut(s) 108, 125, 175
BsnI GGCC 2 cut(s) 105, 179
BspANI GGCC 2 cut(s) 105, 179
BssECI CCNNGG 1 cut(s) 107
Bst2UI CCWGG 2 cut(s) 32, 176
BstF5I GGATG 2 cut(s) 24, 203
BstNI CCWGG 2 cut(s) 32, 176
BstNSI RCATGY 3 cut(s) 48, 142, 201
BstSCI CCNGG 3 cut(s) 30, 100, 174
BstXI CCANNNNNNTGG 1 cut(s) 31
BsuRI GGCC 2 cut(s) 105, 179
BtsCI GGATG 2 cut(s) 24, 203
BtsI GCAGTG 1 cut(s) 113
BtsIMutI CAGTG 1 cut(s) 113
Cfr13I GGNCC 1 cut(s) 104
CviAII CATG 3 cut(s) 45, 139, 198
CviJI RGCY 4 cut(s) 23, 105, 165, 179
CviKI_1 RGCY 4 cut(s) 23, 105, 165, 179
DrdI GACNNNNNNGTC 1 cut(s) 198
DseDI GACNNNNNNGTC 1 cut(s) 198
EaeI YGGCCR 1 cut(s) 177
EcoRII CCWGG 2 cut(s) 30, 174
FaeI CATG 3 cut(s) 48, 142, 201
FaiI YATR 4 cut(s) 46, 140, 189, 199
FatI CATG 3 cut(s) 44, 138, 197
FokI GGATG 2 cut(s) 11, 190
FspBI CTAG 2 cut(s) 143, 211
HaeIII GGCC 2 cut(s) 105, 179
HapII CCGG 1 cut(s) 102
Hin1II CATG 3 cut(s) 48, 142, 201
HinfI GANTC 1 cut(s) 4
HpaII CCGG 1 cut(s) 102
Hpy188I TCNGA 1 cut(s) 128
HpyAV CCTTC 1 cut(s) 18
Hsp92II CATG 3 cut(s) 48, 142, 201
LpnPI CCDG 6 cut(s) 17, 44, 115, 161, 188, 193
MaeI CTAG 2 cut(s) 143, 211
MaeIII GTNAC 2 cut(s) 54, 111
MlsI TGGCCA 1 cut(s) 179
MluNI TGGCCA 1 cut(s) 179
MlyI GAGTC 1 cut(s) 13
MmeI TCCRAC 1 cut(s) 193
MnlI CCTC 6 cut(s) 38, 50, 82, 117, 161, 176
Mox20I TGGCCA 1 cut(s) 179
MscI TGGCCA 1 cut(s) 179
Msp20I TGGCCA 1 cut(s) 179
MspI CCGG 1 cut(s) 102
MspR9I CCNGG 3 cut(s) 32, 102, 176
MvaI CCWGG 2 cut(s) 32, 176
NciI CCSGG 1 cut(s) 102
NlaIII CATG 3 cut(s) 48, 142, 201
NmuCI GTSAC 1 cut(s) 111
NspI RCATGY 3 cut(s) 48, 142, 201
PciI ACATGT 1 cut(s) 197
PflMI CCANNNNNTGG 1 cut(s) 175
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
PscI ACATGT 1 cut(s) 197
Psp6I CCWGG 2 cut(s) 30, 174
PspGI CCWGG 2 cut(s) 30, 174
PspPI GGNCC 1 cut(s) 104
Sau96I GGNCC 1 cut(s) 104
SchI GAGTC 1 cut(s) 13
ScrFI CCNGG 3 cut(s) 32, 102, 176
SetI ASST 2 cut(s) 153, 177
SspMI CTAG 2 cut(s) 143, 211
StyD4I CCNGG 3 cut(s) 30, 100, 174
TaqI TCGA 1 cut(s) 160
TaqII GACCGA 1 cut(s) 99
TscAI CASTG 1 cut(s) 120
TseFI GTSAC 1 cut(s) 111
Tsp45I GTSAC 1 cut(s) 111
TspGWI ACGGA 1 cut(s) 196
TspRI CASTG 1 cut(s) 120
Van91I CCANNNNNTGG 1 cut(s) 175
XceI RCATGY 3 cut(s) 48, 142, 201
XspI CTAG 2 cut(s) 143, 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.