Rmu_sc0004638.1_g000004

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004638.1
Physical Location & Seq
Forward (+)
3469 .. 4320
852 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004638.1_g000004.1.cds

Sequence Viewer

Length: 852 bp
atgattcatttctctcagggattgactaagcgcttaaagaaagttagcaagacgattgatcaactcctggagaagataatagacgagcgtgaacaagttgccaacactaggagttggaaacaaagccagcatgaggactttgtagacgtgttactttcgttaatgaaccaaccattgaacccgaatgataagcaagtacactttcttgatcgaataaatgtgaaagccaacttactagacatgatcacggcgacttttgatactttagccacatcgattgtttggagccttgccgagctcttgaggcatccaaggatcatgaagaatctccaagaagagctccaaagtgtggttggtatggaccaaatggtggaagaatctgatttgtccaagctagattacttgagtatggtggtgaaggagagcttcagactacacccagttgcaccgttactagtcccacgtgaatccatcgaggacattacaatcgatggatatgacatacccaagaagtcgcggatcatagtaaacatctggagtattggaagagatcctaatgtttggtcagaaaatgtggaggaattttttcctgaaaggttcatgaacatcaatatagacccccggggacatgactttcagctcatcccatttgggtttgggcgaagagggtgtcagggtatgcaattagggctaaccatagttcagctagttctggcacagctgatgcattgctttaaatgggagctcccaaatggcttgctacctcaacacttggacatgtctgaggatttcggcttatcactgtcaaaggtcaaacacttgcttgctaagccaacgtaccatcttatgtag

Protein Analysis

283

Amino Acids

32.74

Weight (kDa)

5.93

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000282)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 349, 370
AccI GTMKAC 1 cut(s) 144
AccII CGCG 1 cut(s) 517
AciI CCGC 1 cut(s) 517
AclWI GGATC 3 cut(s) 323, 527, 545
AcsI RAATTY 1 cut(s) 581
AcuI CTGAAG 1 cut(s) 412
AcvI CACGTG 1 cut(s) 464
AfaI GTAC 2 cut(s) 198, 839
AfeI AGCGCT 1 cut(s) 32
AfiI CCNNNNNNNGG 4 cut(s) 108, 133, 349, 370
AflIII ACRYGT 2 cut(s) 147, 777
AgsI TTSAA 1 cut(s) 178
AhlI ACTAGT 1 cut(s) 454
AjiI CACGTC 1 cut(s) 148
AjnI CCWGG 1 cut(s) 66
AluBI AGCT 8 cut(s) 298, 340, 394, 426, 640, 706, 721, 745
AluI AGCT 8 cut(s) 298, 340, 394, 426, 640, 706, 721, 745
Alw21I GWGCWC 3 cut(s) 300, 342, 747
AlwI GGATC 3 cut(s) 323, 527, 545
Ama87I CYCGRG 1 cut(s) 621
Aor51HI AGCGCT 1 cut(s) 32
ApoI RAATTY 1 cut(s) 581
ArsI GACNNNNNNTTYG 2 cut(s) 655, 687
Asp700I GAANNNNTTC 1 cut(s) 585
AspLEI GCGC 1 cut(s) 33
AspS9I GGNCC 1 cut(s) 361
AsuC2I CCSGG 2 cut(s) 622, 623
AsuHPI GGTGA 1 cut(s) 427
AvaI CYCGRG 1 cut(s) 621
AvaII GGWCC 1 cut(s) 361
BanII GRGCYC 3 cut(s) 300, 342, 747
BbrPI CACGTG 1 cut(s) 464
Bbv12I GWGCWC 3 cut(s) 300, 342, 747
BccI CCATC 3 cut(s) 479, 485, 849
BceAI ACGGC 1 cut(s) 264
BciT130I CCWGG 1 cut(s) 68
BclI TGATCA 2 cut(s) 58, 243
BcnI CCSGG 2 cut(s) 622, 623
BcuI ACTAGT 1 cut(s) 454
BfaI CTAG 5 cut(s) 108, 236, 395, 455, 707
BfoI RGCGCY 1 cut(s) 34
BlpI GCTNAGC 1 cut(s) 828
Bme1390I CCNGG 3 cut(s) 68, 622, 623
Bme18I GGWCC 1 cut(s) 361
BmeT110I CYCGRG 1 cut(s) 621
BmgBI CACGTC 1 cut(s) 148
BmgT120I GGNCC 1 cut(s) 361
BmiI GGNNCC 1 cut(s) 287
BmrFI CCNGG 3 cut(s) 68, 622, 623
BmrI ACTGGG 1 cut(s) 434
BmsI GCATC 2 cut(s) 316, 714
BmuI ACTGGG 1 cut(s) 434
BpmI CTGGAG 2 cut(s) 89, 556
Bpu1102I GCTNAGC 1 cut(s) 828
BpuEI CTTGAG 2 cut(s) 322, 424
BpuMI CCSGG 2 cut(s) 622, 623
Bsa29I ATCGAT 2 cut(s) 275, 489
BsaAI YACGTR 1 cut(s) 464
BsaJI CCNNGG 4 cut(s) 311, 620, 621, 622
Bsc4I CCNNNNNNNGG 4 cut(s) 108, 133, 349, 370
Bse1I ACTGG 1 cut(s) 440
Bse3DI GCAATG 1 cut(s) 727
BseBI CCWGG 1 cut(s) 68
BseCI ATCGAT 2 cut(s) 275, 489
BseDI CCNNGG 4 cut(s) 311, 620, 621, 622
BseGI GGATG 2 cut(s) 307, 642
BseLI CCNNNNNNNGG 4 cut(s) 108, 133, 349, 370
BseMI GCAATG 1 cut(s) 727
BseMII CTCAG 2 cut(s) 29, 774
BseNI ACTGG 1 cut(s) 440
Bsh1236I CGCG 1 cut(s) 517
BshVI ATCGAT 2 cut(s) 275, 489
BsiHKAI GWGCWC 3 cut(s) 300, 342, 747
BsiHKCI CYCGRG 1 cut(s) 621
BsiSI CCGG 1 cut(s) 622
BslFI GGGAC 2 cut(s) 443, 639
BslI CCNNNNNNNGG 4 cut(s) 108, 133, 349, 370
BsmFI GGGAC 2 cut(s) 443, 639
BsoBI CYCGRG 1 cut(s) 621
Bsp1286I GDGCHC 3 cut(s) 300, 342, 747
Bsp143I GATC 6 cut(s) 58, 208, 243, 315, 519, 550
Bsp1720I GCTNAGC 1 cut(s) 828
BspACI CCGC 1 cut(s) 517
BspCNI CTCAG 2 cut(s) 28, 775
BspDI ATCGAT 2 cut(s) 275, 489
BspFNI CGCG 1 cut(s) 517
BspHI TCATGA 2 cut(s) 318, 600
BspLI GGNNCC 1 cut(s) 287
BspPI GGATC 3 cut(s) 323, 527, 545
BspQI GCTCTTC 1 cut(s) 330
BsrDI GCAATG 1 cut(s) 727
BsrI ACTGG 1 cut(s) 440
BssECI CCNNGG 4 cut(s) 311, 620, 621, 622
BssMI GATC 6 cut(s) 58, 208, 243, 315, 519, 550
BssT1I CCWWGG 1 cut(s) 311
Bst2UI CCWGG 1 cut(s) 68
Bst4CI ACNGT 2 cut(s) 450, 804
Bst6I CTCTTC 3 cut(s) 330, 541, 658
BstBAI YACGTR 1 cut(s) 464
BstC8I GCNNGC 3 cut(s) 128, 758, 825
BstDEI CTNAG 4 cut(s) 15, 27, 783, 828
BstF5I GGATG 2 cut(s) 307, 642
BstFNI CGCG 1 cut(s) 517
BstH2I RGCGCY 1 cut(s) 34
BstHHI GCGC 1 cut(s) 33
BstKTI GATC 6 cut(s) 61, 211, 246, 318, 522, 553
BstMBI GATC 6 cut(s) 58, 208, 243, 315, 519, 550
BstMWI GCNNNNNNNGC 3 cut(s) 304, 688, 829
BstNI CCWGG 1 cut(s) 68
BstNSI RCATGY 1 cut(s) 781
BstSCI CCNGG 3 cut(s) 66, 620, 621
BstUI CGCG 1 cut(s) 517
BstX2I RGATCY 1 cut(s) 550
BstYI RGATCY 1 cut(s) 550
Bsu15I ATCGAT 2 cut(s) 275, 489
BsuTUI ATCGAT 2 cut(s) 275, 489
BtrI CACGTC 1 cut(s) 148
BtsCI GGATG 2 cut(s) 307, 642
BtsIMutI CAGTG 1 cut(s) 800
Cac8I GCNNGC 3 cut(s) 128, 758, 825
CciI TCATGA 2 cut(s) 318, 600
CfoI GCGC 1 cut(s) 33
Cfr13I GGNCC 1 cut(s) 361
Cfr9I CCCGGG 1 cut(s) 621
ClaI ATCGAT 2 cut(s) 275, 489
Csp6I GTAC 2 cut(s) 197, 838
CspCI CAANNNNNGTGG 2 cut(s) 259, 294
CviAII CATG 6 cut(s) 131, 241, 319, 601, 629, 778
CviQI GTAC 2 cut(s) 197, 838
DdeI CTNAG 4 cut(s) 15, 27, 783, 828
DpnI GATC 6 cut(s) 60, 210, 245, 317, 521, 552
DpnII GATC 6 cut(s) 58, 208, 243, 315, 519, 550
DraI TTTAAA 1 cut(s) 736
Eam1104I CTCTTC 3 cut(s) 330, 541, 658
EarI CTCTTC 3 cut(s) 330, 541, 658
Ecl136II GAGCTC 3 cut(s) 298, 340, 745
Eco130I CCWWGG 1 cut(s) 311
Eco24I GRGCYC 3 cut(s) 300, 342, 747
Eco47I GGWCC 1 cut(s) 361
Eco47III AGCGCT 1 cut(s) 32
Eco53kI GAGCTC 3 cut(s) 298, 340, 745
Eco57I CTGAAG 1 cut(s) 412
Eco72I CACGTG 1 cut(s) 464
Eco88I CYCGRG 1 cut(s) 621
EcoICRI GAGCTC 3 cut(s) 298, 340, 745
EcoRII CCWGG 1 cut(s) 66
EcoT14I CCWWGG 1 cut(s) 311
EcoT22I ATGCAT 1 cut(s) 729
EcoT38I GRGCYC 3 cut(s) 300, 342, 747
ErhI CCWWGG 1 cut(s) 311
FaeI CATG 6 cut(s) 134, 244, 322, 604, 632, 781
FalI AAGNNNNNCTT 2 cut(s) 410, 442
FaqI GGGAC 2 cut(s) 443, 639
FatI CATG 6 cut(s) 130, 240, 318, 600, 628, 777
FbaI TGATCA 2 cut(s) 58, 243
FblI GTMKAC 1 cut(s) 144
FokI GGATG 2 cut(s) 294, 629
FriOI GRGCYC 3 cut(s) 300, 342, 747
FspBI CTAG 5 cut(s) 108, 236, 395, 455, 707
GlaI GCGC 1 cut(s) 32
GsuI CTGGAG 2 cut(s) 89, 556
HaeII RGCGCY 1 cut(s) 34
HapII CCGG 1 cut(s) 622
HhaI GCGC 1 cut(s) 33
Hin1II CATG 6 cut(s) 134, 244, 322, 604, 632, 781
Hin6I GCGC 1 cut(s) 31
HinP1I GCGC 1 cut(s) 31
HinfI GANTC 4 cut(s) 4, 325, 377, 467
HpaII CCGG 1 cut(s) 622
HphI GGTGA 1 cut(s) 427
Hpy166II GTNNAC 4 cut(s) 92, 145, 199, 529
Hpy188I TCNGA 4 cut(s) 382, 431, 568, 784
Hpy188III TCNNGA 6 cut(s) 206, 301, 319, 535, 590, 601
Hpy8I GTNNAC 4 cut(s) 92, 145, 199, 529
HpyAV CCTTC 1 cut(s) 412
HpyCH4III ACNGT 2 cut(s) 450, 804
HpyCH4IV ACGT 3 cut(s) 147, 463, 836
HpyCH4V TGCA 3 cut(s) 446, 682, 727
HpyF10VI GCNNNNNNNGC 3 cut(s) 304, 688, 829
HpyF3I CTNAG 4 cut(s) 15, 27, 783, 828
HpySE526I ACGT 3 cut(s) 147, 463, 836
Hsp92II CATG 6 cut(s) 134, 244, 322, 604, 632, 781
HspAI GCGC 1 cut(s) 31
Ksp22I TGATCA 2 cut(s) 58, 243
Kzo9I GATC 6 cut(s) 58, 208, 243, 315, 519, 550
LguI GCTCTTC 1 cut(s) 330
LmnI GCTCC 4 cut(s) 285, 345, 742, 750
LweI GCATC 2 cut(s) 316, 714
MaeI CTAG 5 cut(s) 108, 236, 395, 455, 707
MaeII ACGT 3 cut(s) 147, 463, 836
MaeIII GTNAC 2 cut(s) 150, 450
MalI GATC 6 cut(s) 60, 210, 245, 317, 521, 552
MboI GATC 6 cut(s) 58, 208, 243, 315, 519, 550
MboII GAAGA 6 cut(s) 85, 334, 347, 386, 558, 675
MflI RGATCY 1 cut(s) 550
MhlI GDGCHC 3 cut(s) 300, 342, 747
MluCI AATT 2 cut(s) 581, 683
MmeI TCCRAC 1 cut(s) 95
MnlI CCTC 7 cut(s) 127, 297, 469, 571, 659, 774, 778
Mph1103I ATGCAT 1 cut(s) 729
MroXI GAANNNNTTC 1 cut(s) 585
MseI TTAA 3 cut(s) 35, 161, 735
MspA1I CMGCKG 1 cut(s) 721
MspI CCGG 1 cut(s) 622
MspR9I CCNGG 3 cut(s) 68, 622, 623
MvaI CCWGG 1 cut(s) 68
MvnI CGCG 1 cut(s) 517
MwoI GCNNNNNNNGC 3 cut(s) 304, 688, 829
NciI CCSGG 2 cut(s) 622, 623
NdeII GATC 6 cut(s) 58, 208, 243, 315, 519, 550
NlaIII CATG 6 cut(s) 134, 244, 322, 604, 632, 781
NlaIV GGNNCC 1 cut(s) 287
NmeAIII GCCGAG 1 cut(s) 319
NsiI ATGCAT 1 cut(s) 729
NspI RCATGY 1 cut(s) 781
PagI TCATGA 2 cut(s) 318, 600
PciI ACATGT 1 cut(s) 777
PciSI GCTCTTC 1 cut(s) 330
PdmI GAANNNNTTC 1 cut(s) 585
PfeI GAWTC 4 cut(s) 4, 325, 377, 467
PflMI CCANNNNNTGG 2 cut(s) 349, 370
PfoI TCCNGGA 1 cut(s) 66
PmaCI CACGTG 1 cut(s) 464
PmlI CACGTG 1 cut(s) 464
Ppu21I YACGTR 1 cut(s) 464
PscI ACATGT 1 cut(s) 777
Psp124BI GAGCTC 3 cut(s) 300, 342, 747
Psp6I CCWGG 1 cut(s) 66
PspCI CACGTG 1 cut(s) 464
PspGI CCWGG 1 cut(s) 66
PspN4I GGNNCC 1 cut(s) 287
PspPI GGNCC 1 cut(s) 361
PsuI RGATCY 1 cut(s) 550
PvuII CAGCTG 1 cut(s) 721
RsaI GTAC 2 cut(s) 198, 839
RsaNI GTAC 2 cut(s) 197, 838
SacI GAGCTC 3 cut(s) 300, 342, 747
SapI GCTCTTC 1 cut(s) 330
SaqAI TTAA 3 cut(s) 35, 161, 735
Sau3AI GATC 6 cut(s) 58, 208, 243, 315, 519, 550
Sau96I GGNCC 1 cut(s) 361
ScrFI CCNGG 3 cut(s) 68, 622, 623
SduI GDGCHC 3 cut(s) 300, 342, 747
SfaNI GCATC 2 cut(s) 316, 714
SinI GGWCC 1 cut(s) 361
SmaI CCCGGG 1 cut(s) 623
SmlI CTYRAG 2 cut(s) 301, 403
SmoI CTYRAG 2 cut(s) 301, 403
SpeI ACTAGT 1 cut(s) 454
Sse9I AATT 2 cut(s) 581, 683
SsiI CCGC 1 cut(s) 517
SspMI CTAG 5 cut(s) 108, 236, 395, 455, 707
SstI GAGCTC 3 cut(s) 300, 342, 747
StyD4I CCNGG 3 cut(s) 66, 620, 621
StyI CCWWGG 1 cut(s) 311
TaaI ACNGT 2 cut(s) 450, 804
TaiI ACGT 3 cut(s) 150, 466, 839
TaqI TCGA 4 cut(s) 211, 275, 474, 489
TasI AATT 2 cut(s) 581, 683
TatI WGTACW 1 cut(s) 196
TfiI GAWTC 4 cut(s) 4, 325, 377, 467
Tru1I TTAA 3 cut(s) 35, 161, 735
Tru9I TTAA 3 cut(s) 35, 161, 735
TscAI CASTG 1 cut(s) 807
TspDTI ATGAA 4 cut(s) 179, 335, 589, 617
TspMI CCCGGG 1 cut(s) 621
TspRI CASTG 1 cut(s) 807
Van91I CCANNNNNTGG 2 cut(s) 349, 370
VpaK11BI GGWCC 1 cut(s) 361
XapI RAATTY 1 cut(s) 581
XceI RCATGY 1 cut(s) 781
XcmI CCANNNNNNNNNTGG 1 cut(s) 350
XmaI CCCGGG 1 cut(s) 621
XmiI GTMKAC 1 cut(s) 144
XmnI GAANNNNTTC 1 cut(s) 585
XspI CTAG 5 cut(s) 108, 236, 395, 455, 707
Zsp2I ATGCAT 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.