Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004483.1

Orthogroup ID

OG0000282

Physical Location & Seq

Genomic Coordinates Reverse (-)

18863 .. 23028

Gene Structure 4166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004483.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

atgagtccttcaacaattaccatccttctcctcttcgttgccctcatctggtttctcatcgctgcagccttctcaaaaccaaagcacaagaagctacctcctggacctttggcactaccggtcattggtcaccttcatatgctaggcaatctcccacatcgcagcctccaacacttggccaaaaaatatggacccataatgtctattcgccttgggaatgtatccaccatactagtctcgtccccgaaagctgcagagctattcctcaaaactcatgacgccaatttcgcgagcaggccgacagtccaggcctcagagcacctagcttatggcacaatgggcctggcgtttgccaagtacggcccctattggcgccatgtgaggaagctctgtaccctcgagcttctttgtccctcgaaagcggaggcttttgcgccgctgcgaagggaggagatagaactgttggtgcagtcgctgaagaaagctggagagggaggtgaggtggtggatgttagtgacaagatttatggcgttggtgaggatataacgtataggatgatattgggttgcacaaaggatgatgctaggtttggtttgaaggagattgttcaccaagtttcgttgttaaccggggcatttaacgtagctgattttgtgcccttcctcggtccatttgattttcagggattgaccaagcgtttaaagaaagttagcaagacgatcgatcaactcctggagaagataatagacgagcatgaacaagttgccaacactaagagtgggaaacaaggccatgaggactttgtagacgtgttgcttgcgttaacgaaccgaccgttgaacccgaatgatgagcaagtacacttccttgatcgaacaaatgtgaaagccatcttactagacatgataacgggggcttttgatacttcagccacatcaattgtttggagccttgccgagctcttgaggcatccaaggatcatgaagaatctccaagaagagatccaaagtgtggttggtatggaccgaatggtggaagaatctgatttgcccaagctggattacttgagtatggtggtaaaggagagcttcagactacacccagttgtaccgttactagtcccacatgaatccatcgaggacattaccatcgatggatatgacatacccaagaagtcgcggatcatagtaaacatctggagcattggaagagatcctaatgtttggtcagaaaatgttgaggagttttatcctgaaaggttcatgaacaacaatatagacctccggggacataactttcagcttatcccatttgggtctgggcgaagagggtgtccgggtatgcaattagggctaaccacagttcggctagttctggcacagctggttcattgctttaactgggagctcccaaatggcttgctacctcaagacttggacatgtccgaggatttcggcttatcactgtcaaaagccaaacacttggttgctaagccaacgtaccgtcttacgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0055114 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

504

Amino Acids

56.53

Weight (kDa)

7.02

Isoelectric Point (pI)

39.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000282)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica	MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica	Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis	pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis	RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata	RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora	Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa	Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha	Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana	Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	372
AccB7I	CCANNNNNTGG	2 cut(s)	175, 1012
AccI	GTMKAC	1 cut(s)	807
AccII	CGCG	2 cut(s)	290, 1180
AciI	CCGC	3 cut(s)	422, 437, 1180
AclWI	GGATC	4 cut(s)	986, 997, 1190, 1208
AcoI	YGGCCR	1 cut(s)	177
AcuI	CTGAAG	3 cut(s)	497, 912, 1075
AcyI	GRCGYC	2 cut(s)	279, 373
AfaI	GTAC	5 cut(s)	359, 394, 861, 1110, 1502
AfiI	CCNNNNNNNGG	7 cut(s)	48, 125, 175, 665, 1012, 1033, 1365
AflIII	ACRYGT	2 cut(s)	810, 1440
AgeI	ACCGGT	1 cut(s)	118
AgsI	TTSAA	3 cut(s)	12, 598, 841
AhlI	ACTAGT	2 cut(s)	232, 1117
AjiI	CACGTC	1 cut(s)	811
AjnI	CCWGG	4 cut(s)	100, 306, 342, 732
Alw21I	GWGCWC	3 cut(s)	321, 963, 1410
Alw26I	GTCTC	1 cut(s)	241
AlwI	GGATC	4 cut(s)	986, 997, 1190, 1208
AlwNI	CAGNNNCTG	1 cut(s)	475
Ama87I	CYCGRG	1 cut(s)	398
AoxI	GGCC	6 cut(s)	177, 296, 309, 340, 361, 790
ApeKI	GCWGC	5 cut(s)	62, 65, 162, 251, 439
ArsI	GACNNNNNNTTYG	4 cut(s)	269, 301, 1318, 1350
AsiGI	ACCGGT	1 cut(s)	118
AspLEI	GCGC	2 cut(s)	375, 436
AspS9I	GGNCC	6 cut(s)	104, 191, 340, 362, 668, 1024
AsuC2I	CCSGG	3 cut(s)	631, 1286, 1338
AsuHPI	GGTGA	4 cut(s)	122, 509, 548, 602
AvaI	CYCGRG	1 cut(s)	398
AvaII	GGWCC	4 cut(s)	104, 191, 668, 1024
BaeGI	GKGCMC	1 cut(s)	660
BalI	TGGCCA	1 cut(s)	179
BanI	GGYRCC	1 cut(s)	372
BanII	GRGCYC	2 cut(s)	963, 1410
Bbv12I	GWGCWC	3 cut(s)	321, 963, 1410
BbvI	GCAGC	5 cut(s)	49, 77, 174, 238, 426
BccI	CCATC	5 cut(s)	29, 899, 1142, 1148, 1157
BceAI	ACGGC	1 cut(s)	376
BcgI	CGANNNNNNTGC	2 cut(s)	703, 737
BciT130I	CCWGG	4 cut(s)	102, 308, 344, 734
BciVI	GTATCC	1 cut(s)	232
BcnI	CCSGG	3 cut(s)	631, 1286, 1338
BcoDI	GTCTC	1 cut(s)	241
BcuI	ACTAGT	2 cut(s)	232, 1117
BfaI	CTAG	7 cut(s)	143, 233, 323, 585, 899, 1118, 1370
BfmI	CTRYAG	2 cut(s)	63, 252
BfoI	RGCGCY	1 cut(s)	376
BfuI	GTATCC	1 cut(s)	232
BisI	GCNGC	6 cut(s)	63, 66, 163, 252, 437, 440
BlpI	GCTNAGC	1 cut(s)	1491
BlsI	GCNGC	6 cut(s)	64, 67, 164, 253, 438, 441
Bme1390I	CCNGG	7 cut(s)	102, 308, 344, 631, 734, 1286, 1338
Bme18I	GGWCC	4 cut(s)	104, 191, 668, 1024
BmeT110I	CYCGRG	1 cut(s)	398
BmgBI	CACGTC	1 cut(s)	811
BmgT120I	GGNCC	6 cut(s)	104, 191, 340, 362, 668, 1024
BmiI	GGNNCC	4 cut(s)	193, 364, 374, 950
BmrFI	CCNGG	7 cut(s)	102, 308, 344, 631, 734, 1286, 1338
BmrI	ACTGGG	2 cut(s)	1097, 1411
BmsI	GCATC	2 cut(s)	571, 979
BmuI	ACTGGG	2 cut(s)	1097, 1411
BpmI	CTGGAG	3 cut(s)	507, 755, 1219
Bpu1102I	GCTNAGC	1 cut(s)	1491
BpuEI	CTTGAG	3 cut(s)	985, 1087, 1413
BpuMI	CCSGG	3 cut(s)	631, 1286, 1338
Bsa29I	ATCGAT	2 cut(s)	723, 1152
BsaAI	YACGTR	1 cut(s)	1512
BsaHI	GRCGYC	2 cut(s)	279, 373
BsaJI	CCNNGG	6 cut(s)	211, 630, 664, 974, 1285, 1446
BsaWI	WCCGGW	1 cut(s)	118
BsaXI	ACNNNNNCTCC	2 cut(s)	486, 516
Bsc4I	CCNNNNNNNGG	7 cut(s)	48, 125, 175, 665, 1012, 1033, 1365
Bse118I	RCCGGY	1 cut(s)	118
Bse1I	ACTGG	2 cut(s)	1103, 1406
Bse3DI	GCAATG	1 cut(s)	1390
BseBI	CCWGG	4 cut(s)	102, 308, 344, 734
BseCI	ATCGAT	2 cut(s)	723, 1152
BseDI	CCNNGG	6 cut(s)	211, 630, 664, 974, 1285, 1446
BseGI	GGATG	5 cut(s)	21, 514, 561, 583, 970
BseLI	CCNNNNNNNGG	7 cut(s)	48, 125, 175, 665, 1012, 1033, 1365
BseMI	GCAATG	1 cut(s)	1390
BseMII	CTCAG	1 cut(s)	327
BseNI	ACTGG	2 cut(s)	1103, 1406
BseRI	GAGGAG	3 cut(s)	20, 464, 1256
BseSI	GKGCMC	1 cut(s)	660
BseXI	GCAGC	5 cut(s)	49, 77, 174, 238, 426
BsgI	GTGCAG	1 cut(s)	488
Bsh1236I	CGCG	2 cut(s)	290, 1180
Bsh1285I	CGRYCG	2 cut(s)	723, 836
BshFI	GGCC	6 cut(s)	179, 298, 311, 342, 363, 792
BshNI	GGYRCC	1 cut(s)	372
BshTI	ACCGGT	1 cut(s)	118
BshVI	ATCGAT	2 cut(s)	723, 1152
BsiEI	CGRYCG	2 cut(s)	723, 836
BsiHKAI	GWGCWC	3 cut(s)	321, 963, 1410
BsiHKCI	CYCGRG	1 cut(s)	398
BsiSI	CCGG	4 cut(s)	119, 630, 1285, 1337
BslFI	GGGAC	4 cut(s)	226, 396, 1106, 1302
BslI	CCNNNNNNNGG	7 cut(s)	48, 125, 175, 665, 1012, 1033, 1365
BsmAI	GTCTC	1 cut(s)	241
BsmFI	GGGAC	4 cut(s)	226, 396, 1106, 1302
BsnI	GGCC	6 cut(s)	179, 298, 311, 342, 363, 792
BsoBI	CYCGRG	1 cut(s)	398
Bsp1286I	GDGCHC	4 cut(s)	321, 660, 963, 1410
Bsp143I	GATC	7 cut(s)	720, 724, 871, 978, 1002, 1182, 1213
Bsp1720I	GCTNAGC	1 cut(s)	1491
Bsp68I	TCGCGA	1 cut(s)	290
BspACI	CCGC	3 cut(s)	422, 437, 1180
BspANI	GGCC	6 cut(s)	179, 298, 311, 342, 363, 792
BspCNI	CTCAG	1 cut(s)	326
BspDI	ATCGAT	2 cut(s)	723, 1152
BspFNI	CGCG	2 cut(s)	290, 1180
BspHI	TCATGA	3 cut(s)	274, 981, 1263
BspLI	GGNNCC	4 cut(s)	193, 364, 374, 950
BspMAI	CTGCAG	2 cut(s)	67, 256
BspPI	GGATC	4 cut(s)	986, 997, 1190, 1208
BspT107I	GGYRCC	1 cut(s)	372
BsrDI	GCAATG	1 cut(s)	1390
BsrFI	RCCGGY	1 cut(s)	118
BsrI	ACTGG	2 cut(s)	1103, 1406
BssAI	RCCGGY	1 cut(s)	118
BssECI	CCNNGG	6 cut(s)	211, 630, 664, 974, 1285, 1446
BssMI	GATC	7 cut(s)	720, 724, 871, 978, 1002, 1182, 1213
BssNI	GRCGYC	2 cut(s)	279, 373
BssT1I	CCWWGG	2 cut(s)	211, 974
Bst2UI	CCWGG	4 cut(s)	102, 308, 344, 734
Bst4CI	ACNGT	7 cut(s)	304, 462, 837, 1113, 1363, 1467, 1505
Bst6I	CTCTTC	4 cut(s)	38, 993, 1204, 1321
BstACI	GRCGYC	2 cut(s)	279, 373
BstBAI	YACGTR	1 cut(s)	1512
BstC8I	GCNNGC	4 cut(s)	292, 296, 819, 1421
BstDEI	CTNAG	3 cut(s)	313, 774, 1491
BstEII	GGTNACC	1 cut(s)	128
BstF5I	GGATG	5 cut(s)	21, 514, 561, 583, 970
BstFNI	CGCG	2 cut(s)	290, 1180
BstH2I	RGCGCY	1 cut(s)	376
BstHHI	GCGC	2 cut(s)	375, 436
BstKTI	GATC	7 cut(s)	723, 727, 874, 981, 1005, 1185, 1216
BstMAI	GTCTC	1 cut(s)	241
BstMBI	GATC	7 cut(s)	720, 724, 871, 978, 1002, 1182, 1213
BstMCI	CGRYCG	2 cut(s)	723, 836
BstMWI	GCNNNNNNNGC	5 cut(s)	91, 287, 339, 967, 1351
BstNI	CCWGG	4 cut(s)	102, 308, 344, 734
BstNSI	RCATGY	1 cut(s)	1444
BstPI	GGTNACC	1 cut(s)	128
BstSCI	CCNGG	7 cut(s)	100, 306, 342, 629, 732, 1284, 1336
BstSFI	CTRYAG	2 cut(s)	63, 252
BstSLI	GKGCMC	1 cut(s)	660
BstSNI	TACGTA	1 cut(s)	1512
BstUI	CGCG	2 cut(s)	290, 1180
BstV1I	GCAGC	5 cut(s)	49, 77, 174, 238, 426
BstX2I	RGATCY	2 cut(s)	1002, 1213
BstXI	CCANNNNNNTGG	1 cut(s)	1483
BstYI	RGATCY	2 cut(s)	1002, 1213
Bsu15I	ATCGAT	2 cut(s)	723, 1152
BsuI	GTATCC	1 cut(s)	232
BsuRI	GGCC	6 cut(s)	179, 298, 311, 342, 363, 792
BsuTUI	ATCGAT	2 cut(s)	723, 1152
BtgZI	GCGATG	2 cut(s)	43, 143
BtrI	CACGTC	1 cut(s)	811
BtsCI	GGATG	5 cut(s)	21, 514, 561, 583, 970
BtsIMutI	CAGTG	1 cut(s)	1463
BtuMI	TCGCGA	1 cut(s)	290
Cac8I	GCNNGC	4 cut(s)	292, 296, 819, 1421
CaiI	CAGNNNCTG	1 cut(s)	475
CciI	TCATGA	3 cut(s)	274, 981, 1263
CfoI	GCGC	2 cut(s)	375, 436
Cfr10I	RCCGGY	1 cut(s)	118
Cfr13I	GGNCC	6 cut(s)	104, 191, 340, 362, 668, 1024
ClaI	ATCGAT	2 cut(s)	723, 1152
CseI	GACGC	1 cut(s)	287
Csp6I	GTAC	5 cut(s)	358, 393, 860, 1109, 1501
CspAI	ACCGGT	1 cut(s)	118
CspCI	CAANNNNNGTGG	2 cut(s)	922, 957
CviAII	CATG	9 cut(s)	275, 377, 755, 794, 904, 982, 1127, 1264, 1441
CviQI	GTAC	5 cut(s)	358, 393, 860, 1109, 1501
DdeI	CTNAG	3 cut(s)	313, 774, 1491
DinI	GGCGCC	1 cut(s)	374
DpnI	GATC	7 cut(s)	722, 726, 873, 980, 1004, 1184, 1215
DpnII	GATC	7 cut(s)	720, 724, 871, 978, 1002, 1182, 1213
DraI	TTTAAA	1 cut(s)	702
EaeI	YGGCCR	1 cut(s)	177
Eam1104I	CTCTTC	4 cut(s)	38, 993, 1204, 1321
EarI	CTCTTC	4 cut(s)	38, 993, 1204, 1321
Ecl136II	GAGCTC	2 cut(s)	961, 1408
Eco105I	TACGTA	1 cut(s)	1512
Eco130I	CCWWGG	2 cut(s)	211, 974
Eco147I	AGGCCT	1 cut(s)	311
Eco24I	GRGCYC	2 cut(s)	963, 1410
Eco47I	GGWCC	4 cut(s)	104, 191, 668, 1024
Eco53kI	GAGCTC	2 cut(s)	961, 1408
Eco57I	CTGAAG	3 cut(s)	497, 912, 1075
Eco88I	CYCGRG	1 cut(s)	398
Eco91I	GGTNACC	1 cut(s)	128
EcoICRI	GAGCTC	2 cut(s)	961, 1408
EcoO65I	GGTNACC	1 cut(s)	128
EcoRII	CCWGG	4 cut(s)	100, 306, 342, 732
EcoT14I	CCWWGG	2 cut(s)	211, 974
EcoT38I	GRGCYC	2 cut(s)	963, 1410
EgeI	GGCGCC	1 cut(s)	374
EheI	GGCGCC	1 cut(s)	374
ErhI	CCWWGG	2 cut(s)	211, 974
FaeI	CATG	9 cut(s)	278, 380, 758, 797, 907, 985, 1130, 1267, 1444
FalI	AAGNNNNNCTT	2 cut(s)	1073, 1105
FaqI	GGGAC	4 cut(s)	226, 396, 1106, 1302
FatI	CATG	9 cut(s)	274, 376, 754, 793, 903, 981, 1126, 1263, 1440
FauNDI	CATATG	1 cut(s)	138
FblI	GTMKAC	1 cut(s)	807
Fnu4HI	GCNGC	6 cut(s)	63, 66, 163, 252, 437, 440
FokI	GGATG	5 cut(s)	8, 521, 568, 590, 957
FriOI	GRGCYC	2 cut(s)	963, 1410
Fsp4HI	GCNGC	6 cut(s)	63, 66, 163, 252, 437, 440
FspBI	CTAG	7 cut(s)	143, 233, 323, 585, 899, 1118, 1370
GlaI	GCGC	2 cut(s)	374, 435
GluI	GCNGC	6 cut(s)	63, 66, 163, 252, 437, 440
GsuI	CTGGAG	3 cut(s)	507, 755, 1219
HaeII	RGCGCY	1 cut(s)	376
HaeIII	GGCC	6 cut(s)	179, 298, 311, 342, 363, 792
HapII	CCGG	4 cut(s)	119, 630, 1285, 1337
HgaI	GACGC	1 cut(s)	287
HhaI	GCGC	2 cut(s)	375, 436
Hin1I	GRCGYC	2 cut(s)	279, 373
Hin1II	CATG	9 cut(s)	278, 380, 758, 797, 907, 985, 1130, 1267, 1444
Hin6I	GCGC	2 cut(s)	373, 434
HinP1I	GCGC	2 cut(s)	373, 434
HincII	GTYRAC	2 cut(s)	627, 825
HindII	GTYRAC	2 cut(s)	627, 825
HinfI	GANTC	4 cut(s)	4, 988, 1040, 1130
HpaI	GTTAAC	2 cut(s)	627, 825
HpaII	CCGG	4 cut(s)	119, 630, 1285, 1337
HphI	GGTGA	4 cut(s)	122, 509, 548, 602
Hpy166II	GTNNAC	6 cut(s)	610, 627, 808, 825, 862, 1192
Hpy188I	TCNGA	5 cut(s)	316, 1045, 1094, 1231, 1447
Hpy188III	TCNNGA	8 cut(s)	275, 289, 964, 982, 1198, 1253, 1264, 1430
Hpy8I	GTNNAC	6 cut(s)	610, 627, 808, 825, 862, 1192
HpyAV	CCTTC	7 cut(s)	18, 35, 79, 143, 438, 592, 670
HpyCH4III	ACNGT	7 cut(s)	304, 462, 837, 1113, 1363, 1467, 1505
HpyCH4IV	ACGT	5 cut(s)	548, 642, 810, 1499, 1511
HpyCH4V	TGCA	5 cut(s)	65, 254, 469, 570, 1345
HpyF10VI	GCNNNNNNNGC	5 cut(s)	91, 287, 339, 967, 1351
HpyF3I	CTNAG	3 cut(s)	313, 774, 1491
HpySE526I	ACGT	5 cut(s)	548, 642, 810, 1499, 1511
Hsp92I	GRCGYC	2 cut(s)	279, 373
Hsp92II	CATG	9 cut(s)	278, 380, 758, 797, 907, 985, 1130, 1267, 1444
HspAI	GCGC	2 cut(s)	373, 434
KasI	GGCGCC	1 cut(s)	372
KspAI	GTTAAC	2 cut(s)	627, 825
Kzo9I	GATC	7 cut(s)	720, 724, 871, 978, 1002, 1182, 1213
LmnI	GCTCC	4 cut(s)	948, 1200, 1405, 1413
Lsp1109I	GCAGC	5 cut(s)	49, 77, 174, 238, 426
LweI	GCATC	2 cut(s)	571, 979
MaeI	CTAG	7 cut(s)	143, 233, 323, 585, 899, 1118, 1370
MaeII	ACGT	5 cut(s)	548, 642, 810, 1499, 1511
MaeIII	GTNAC	3 cut(s)	128, 515, 1113
MalI	GATC	7 cut(s)	722, 726, 873, 980, 1004, 1184, 1215
MboI	GATC	7 cut(s)	720, 724, 871, 978, 1002, 1182, 1213
MboII	GAAGA	8 cut(s)	25, 490, 751, 997, 1010, 1049, 1221, 1338
MfeI	CAATTG	1 cut(s)	939
MflI	RGATCY	2 cut(s)	1002, 1213
MhlI	GDGCHC	4 cut(s)	321, 660, 963, 1410
MlsI	TGGCCA	1 cut(s)	179
MluCI	AATT	4 cut(s)	15, 283, 939, 1346
MluNI	TGGCCA	1 cut(s)	179
Mly113I	GGCGCC	1 cut(s)	373
MlyI	GAGTC	1 cut(s)	13
MmeI	TCCRAC	1 cut(s)	193
Mox20I	TGGCCA	1 cut(s)	179
MscI	TGGCCA	1 cut(s)	179
MseI	TTAA	5 cut(s)	626, 639, 701, 824, 1398
Msp20I	TGGCCA	1 cut(s)	179
MspA1I	CMGCKG	2 cut(s)	439, 1384
MspI	CCGG	4 cut(s)	119, 630, 1285, 1337
MspR9I	CCNGG	7 cut(s)	102, 308, 344, 631, 734, 1286, 1338
MunI	CAATTG	1 cut(s)	939
MvaI	CCWGG	4 cut(s)	102, 308, 344, 734
MvnI	CGCG	2 cut(s)	290, 1180
MwoI	GCNNNNNNNGC	5 cut(s)	91, 287, 339, 967, 1351
NarI	GGCGCC	1 cut(s)	373
NciI	CCSGG	3 cut(s)	631, 1286, 1338
NdeI	CATATG	1 cut(s)	138
NdeII	GATC	7 cut(s)	720, 724, 871, 978, 1002, 1182, 1213
NlaIII	CATG	9 cut(s)	278, 380, 758, 797, 907, 985, 1130, 1267, 1444
NlaIV	GGNNCC	4 cut(s)	193, 364, 374, 950
NmeAIII	GCCGAG	1 cut(s)	982
NmuCI	GTSAC	2 cut(s)	128, 515
NruI	TCGCGA	1 cut(s)	290
NspI	RCATGY	1 cut(s)	1444
PaeR7I	CTCGAG	1 cut(s)	398
PagI	TCATGA	3 cut(s)	274, 981, 1263
PceI	AGGCCT	1 cut(s)	311
PciI	ACATGT	1 cut(s)	1440
PcsI	WCGNNNNNNNCGW	1 cut(s)	833
PfeI	GAWTC	3 cut(s)	988, 1040, 1130
PflMI	CCANNNNNTGG	2 cut(s)	175, 1012
PfoI	TCCNGGA	2 cut(s)	100, 732
PinAI	ACCGGT	1 cut(s)	118
PkrI	GCNGC	6 cut(s)	64, 67, 164, 253, 438, 441
Ple19I	CGATCG	1 cut(s)	723
PleI	GAGTC	1 cut(s)	12
PluTI	GGCGCC	1 cut(s)	376
PpsI	GAGTC	1 cut(s)	12
Ppu21I	YACGTR	1 cut(s)	1512
PscI	ACATGT	1 cut(s)	1440
Psp124BI	GAGCTC	2 cut(s)	963, 1410
Psp6I	CCWGG	4 cut(s)	100, 306, 342, 732
PspEI	GGTNACC	1 cut(s)	128
PspGI	CCWGG	4 cut(s)	100, 306, 342, 732
PspN4I	GGNNCC	4 cut(s)	193, 364, 374, 950
PspPI	GGNCC	6 cut(s)	104, 191, 340, 362, 668, 1024
PspXI	VCTCGAGB	1 cut(s)	398
PstI	CTGCAG	2 cut(s)	67, 256
PstNI	CAGNNNCTG	1 cut(s)	475
PsuI	RGATCY	2 cut(s)	1002, 1213
PvuI	CGATCG	1 cut(s)	723
PvuII	CAGCTG	1 cut(s)	1384
RruI	TCGCGA	1 cut(s)	290
RsaI	GTAC	5 cut(s)	359, 394, 861, 1110, 1502
RsaNI	GTAC	5 cut(s)	358, 393, 860, 1109, 1501
SacI	GAGCTC	2 cut(s)	963, 1410
SaqAI	TTAA	5 cut(s)	626, 639, 701, 824, 1398
SatI	GCNGC	6 cut(s)	63, 66, 163, 252, 437, 440
Sau3AI	GATC	7 cut(s)	720, 724, 871, 978, 1002, 1182, 1213
Sau96I	GGNCC	6 cut(s)	104, 191, 340, 362, 668, 1024
SchI	GAGTC	1 cut(s)	13
ScrFI	CCNGG	7 cut(s)	102, 308, 344, 631, 734, 1286, 1338
SduI	GDGCHC	4 cut(s)	321, 660, 963, 1410
SfaNI	GCATC	2 cut(s)	571, 979
SfcI	CTRYAG	2 cut(s)	63, 252
SfoI	GGCGCC	1 cut(s)	374
Sfr274I	CTCGAG	1 cut(s)	398
SinI	GGWCC	4 cut(s)	104, 191, 668, 1024
SlaI	CTCGAG	1 cut(s)	398
SmlI	CTYRAG	4 cut(s)	398, 964, 1066, 1428
SmoI	CTYRAG	4 cut(s)	398, 964, 1066, 1428
SnaBI	TACGTA	1 cut(s)	1512
SpeI	ACTAGT	2 cut(s)	232, 1117
Sse9I	AATT	4 cut(s)	15, 283, 939, 1346
SseBI	AGGCCT	1 cut(s)	311
SsiI	CCGC	3 cut(s)	422, 437, 1180
SspDI	GGCGCC	1 cut(s)	372
SspMI	CTAG	7 cut(s)	143, 233, 323, 585, 899, 1118, 1370
SstI	GAGCTC	2 cut(s)	963, 1410
StuI	AGGCCT	1 cut(s)	311
StyD4I	CCNGG	7 cut(s)	100, 306, 342, 629, 732, 1284, 1336
StyI	CCWWGG	2 cut(s)	211, 974
TaaI	ACNGT	7 cut(s)	304, 462, 837, 1113, 1363, 1467, 1505
TaiI	ACGT	5 cut(s)	551, 645, 813, 1502, 1514
TaqI	TCGA	6 cut(s)	399, 416, 723, 874, 1137, 1152
TaqII	GACCGA	2 cut(s)	656, 1041
TasI	AATT	4 cut(s)	15, 283, 939, 1346
TatI	WGTACW	1 cut(s)	859
TauI	GCSGC	1 cut(s)	439
TfiI	GAWTC	3 cut(s)	988, 1040, 1130
Tru1I	TTAA	5 cut(s)	626, 639, 701, 824, 1398
Tru9I	TTAA	5 cut(s)	626, 639, 701, 824, 1398
TscAI	CASTG	1 cut(s)	1470
TseFI	GTSAC	2 cut(s)	128, 515
TseI	GCWGC	5 cut(s)	62, 65, 162, 251, 439
Tsp45I	GTSAC	2 cut(s)	128, 515
TspDTI	ATGAA	7 cut(s)	125, 771, 998, 1143, 1252, 1280, 1379
TspRI	CASTG	1 cut(s)	1470
Van91I	CCANNNNNTGG	2 cut(s)	175, 1012
VpaK11BI	GGWCC	4 cut(s)	104, 191, 668, 1024
XceI	RCATGY	1 cut(s)	1444
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1013
XhoI	CTCGAG	1 cut(s)	398
XmiI	GTMKAC	1 cut(s)	807
XspI	CTAG	7 cut(s)	143, 233, 323, 585, 899, 1118, 1370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.