Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0000282

Physical Location & Seq

Genomic Coordinates Forward (+)

41151406 .. 41155638

Gene Structure 4233 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G029600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGAGTCCTTCAACAATGACCATCCTTCTCTTCTTCGTTGCCCTCATCTTGTCTCTCATCAAGCTACCTCCTGGACCTTTGGCACTACCAGTCATTGGCAATCTCCCACATCGCAGCCTCCAACACTTGGCCAAAAAATATGGACCCATAATGTCTATTCGTCTAGGGAATGTACGCGCCATACTAGTCTCATCCCCAAAAGCAGCAAAGCTATTCCTCAGAACCCATGACGCCAATTTCGCTAGCCGGCCAAGAGTCCAGGCCTCGGAGCACCTAGCTTATGGCATGAATGGCCTGGTCTTTGCCGAGTACGGCCCCTATTGGCGCCATGTGAGGAAGCTCTGCACCCTCGAGCTTCTTTGTCCCTCGAAAGCCGAGGCTTTTGCGCCACTGCGAAGGGAGGAGATAGGGTTGTTGGTGCTGTCGCTGAAGAAAGTTGGAGAGGGAAGTGAGGTGGTGGATGTTACTAACAAGATTTATGGCGTTAATGAGGATATAACGTATAGGATGGTATTGGGTTTTGCAAAAGATGATGGTAGGTTTGGTTTGAAGAAAATTGTTCAGGAAGCTATGTTGTTGACCGGAGCATTCAACATAGCTGATTTTGTGCCCTTCCTCGGTCCATTTGATTTTCAGGGATTGACTAAGCGCTTAAAGAAAGTTAGCAAGACGATTGATCAACTCCTGGAGAAGATAATAGATGAGCGTGAACAAGTTGACAACACTAGGAGTTGGAAACAAAGCCAGCATGAGGACTTTGTAGACGTGTTACTTTCGTTAATGAACCAACCATTGAACCCGAATGATAAGCAAGTACACTTTCTTGATCGAATAAATGTGAAAGCCATCTTACTAGACATGATCACGGCAGCTTTTGATACTTCAGCCACAACGATTGTTTGGAGCCTTGCCGAGCTCTTGAGGCATCCAAGGATCATGAAGAATCTCCAAGAAGAGCTCCAAAGTGTGGTTGGTATGGACCAAATGGTGGAAGAATCTGATTTGCCCAAGCTAGATTACTTGAGTATGGTGGTGAAGGAGAGCTTCAGACTACACCCAGTTGCACCGTTACTAGTCCCACGTGAATCCATCGAGGACATTACAATCGATGGATATGACATACCCAAGAATTCTCGGATCATAGTAAACATCTGGAGTATTGGAAGAGATCCTAATGTTTGGTCAGAAAATGTGGAGGAATTTTTTCCTGAAAGGTTCATGAACATCAATATAGACCTTCGGGGACATGACTTTCAGCTCATCCCATTTGGGTTTGGGCGAAGAGGGTGTCCGGGTATGCAATTAGGGCTAACCATAGTTCAGCTAGTTCTGGCACAGCTGGTGCATTGCTTTAAATGGGAGCTCCCAAATGGCTTGCTACCTCAACACTTGGACATGTCTGAGGATTTCGGCTTATCACTGTCAAAGGTCAAACACTTGCTTGCTAAGCCAACGTACCATCTTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0008150 GO:0008152 GO:0009058 GO:0012505 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0031090 GO:0031984 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0055114 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

489

Amino Acids

55.41

Weight (kDa)

7.25

Isoelectric Point (pI)

42.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	23 - 471	2e-97	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000282)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica	MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica	Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis	pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis	RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata	RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora	Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa	Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha	Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana	Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	324
AccB7I	CCANNNNNTGG	4 cut(s)	95, 127, 967, 988
AccI	GTMKAC	1 cut(s)	762
AccII	CGCG	1 cut(s)	177
AclWI	GGATC	3 cut(s)	941, 1145, 1163
AcoI	YGGCCR	2 cut(s)	129, 248
AcsI	RAATTY	2 cut(s)	1129, 1199
AcuI	CTGAAG	3 cut(s)	449, 867, 1030
AcvI	CACGTG	1 cut(s)	1082
AcyI	GRCGYC	2 cut(s)	231, 325
AfaI	GTAC	4 cut(s)	174, 311, 816, 1457
AfeI	AGCGCT	1 cut(s)	650
AfiI	CCNNNNNNNGG	7 cut(s)	95, 127, 265, 617, 751, 967, 988
AflIII	ACRYGT	2 cut(s)	765, 1395
AgsI	TTSAA	4 cut(s)	12, 550, 592, 796
AhlI	ACTAGT	2 cut(s)	184, 1072
AjiI	CACGTC	1 cut(s)	766
AjnI	CCWGG	4 cut(s)	70, 258, 294, 684
Alw21I	GWGCWC	4 cut(s)	273, 918, 960, 1365
Alw26I	GTCTC	2 cut(s)	57, 193
AlwI	GGATC	3 cut(s)	941, 1145, 1163
Ama87I	CYCGRG	1 cut(s)	350
Aor51HI	AGCGCT	1 cut(s)	650
AoxI	GGCC	5 cut(s)	129, 248, 261, 292, 313
ApeKI	GCWGC	3 cut(s)	114, 203, 869
ApoI	RAATTY	2 cut(s)	1129, 1199
ArsI	GACNNNNNNTTYG	4 cut(s)	221, 253, 1273, 1305
Asp700I	GAANNNNTTC	1 cut(s)	1203
AspLEI	GCGC	4 cut(s)	179, 327, 388, 651
AspS9I	GGNCC	5 cut(s)	74, 143, 314, 620, 979
AsuC2I	CCSGG	1 cut(s)	1293
AsuHPI	GGTGA	1 cut(s)	1045
AsuNHI	GCTAGC	1 cut(s)	242
AvaI	CYCGRG	1 cut(s)	350
AvaII	GGWCC	4 cut(s)	74, 143, 620, 979
BaeGI	GKGCMC	1 cut(s)	612
BalI	TGGCCA	1 cut(s)	131
BanI	GGYRCC	1 cut(s)	324
BanII	GRGCYC	3 cut(s)	918, 960, 1365
BbrPI	CACGTG	1 cut(s)	1082
Bbv12I	GWGCWC	4 cut(s)	273, 918, 960, 1365
BbvI	GCAGC	3 cut(s)	126, 215, 881
BccI	CCATC	7 cut(s)	29, 502, 527, 854, 1097, 1103, 1467
BceAI	ACGGC	2 cut(s)	328, 882
BcgI	CGANNNNNNTGC	2 cut(s)	365, 399
BciT130I	CCWGG	4 cut(s)	72, 260, 296, 686
BclI	TGATCA	2 cut(s)	676, 861
BcnI	CCSGG	1 cut(s)	1293
BcoDI	GTCTC	2 cut(s)	57, 193
BcuI	ACTAGT	2 cut(s)	184, 1072
BfaI	CTAG	9 cut(s)	164, 185, 243, 275, 726, 854, 1013, 1073, 1325
BfoI	RGCGCY	2 cut(s)	328, 652
BisI	GCNGC	3 cut(s)	115, 204, 870
BlpI	GCTNAGC	1 cut(s)	1446
BlsI	GCNGC	3 cut(s)	116, 205, 871
Bme1390I	CCNGG	5 cut(s)	72, 260, 296, 686, 1293
Bme18I	GGWCC	4 cut(s)	74, 143, 620, 979
BmeT110I	CYCGRG	1 cut(s)	350
BmgBI	CACGTC	1 cut(s)	766
BmgT120I	GGNCC	5 cut(s)	74, 143, 314, 620, 979
BmiI	GGNNCC	4 cut(s)	145, 316, 326, 905
BmrFI	CCNGG	5 cut(s)	72, 260, 296, 686, 1293
BmrI	ACTGGG	1 cut(s)	1052
BmsI	GCATC	1 cut(s)	934
BmtI	GCTAGC	1 cut(s)	246
BmuI	ACTGGG	1 cut(s)	1052
BpmI	CTGGAG	2 cut(s)	707, 1174
Bpu1102I	GCTNAGC	1 cut(s)	1446
BpuEI	CTTGAG	2 cut(s)	940, 1042
BpuMI	CCSGG	1 cut(s)	1293
Bsa29I	ATCGAT	1 cut(s)	1107
BsaAI	YACGTR	1 cut(s)	1082
BsaHI	GRCGYC	2 cut(s)	231, 325
BsaJI	CCNNGG	4 cut(s)	264, 375, 616, 929
BsaWI	WCCGGW	1 cut(s)	581
BsaXI	ACNNNNNCTCC	2 cut(s)	395, 425
Bsc4I	CCNNNNNNNGG	7 cut(s)	95, 127, 265, 617, 751, 967, 988
Bse118I	RCCGGY	1 cut(s)	246
Bse1I	ACTGG	2 cut(s)	89, 1058
Bse3DI	GCAATG	1 cut(s)	1345
BseBI	CCWGG	4 cut(s)	72, 260, 296, 686
BseCI	ATCGAT	1 cut(s)	1107
BseDI	CCNNGG	4 cut(s)	264, 375, 616, 929
BseGI	GGATG	6 cut(s)	21, 191, 466, 513, 925, 1260
BseLI	CCNNNNNNNGG	7 cut(s)	95, 127, 265, 617, 751, 967, 988
BseMI	GCAATG	1 cut(s)	1345
BseMII	CTCAG	2 cut(s)	232, 1392
BseNI	ACTGG	2 cut(s)	89, 1058
BseRI	GAGGAG	1 cut(s)	416
BseSI	GKGCMC	1 cut(s)	612
BseXI	GCAGC	3 cut(s)	126, 215, 881
BsgI	GTGCAG	1 cut(s)	328
Bsh1236I	CGCG	1 cut(s)	177
BshFI	GGCC	5 cut(s)	131, 250, 263, 294, 315
BshNI	GGYRCC	1 cut(s)	324
BshVI	ATCGAT	1 cut(s)	1107
BsiHKAI	GWGCWC	4 cut(s)	273, 918, 960, 1365
BsiHKCI	CYCGRG	1 cut(s)	350
BsiSI	CCGG	3 cut(s)	247, 582, 1292
BslFI	GGGAC	3 cut(s)	348, 1061, 1257
BslI	CCNNNNNNNGG	7 cut(s)	95, 127, 265, 617, 751, 967, 988
BsmAI	GTCTC	2 cut(s)	57, 193
BsmFI	GGGAC	3 cut(s)	348, 1061, 1257
BsmI	GAATGC	1 cut(s)	587
BsnI	GGCC	5 cut(s)	131, 250, 263, 294, 315
BsoBI	CYCGRG	1 cut(s)	350
Bsp1286I	GDGCHC	5 cut(s)	273, 612, 918, 960, 1365
Bsp143I	GATC	6 cut(s)	676, 826, 861, 933, 1137, 1168
Bsp1720I	GCTNAGC	1 cut(s)	1446
BspANI	GGCC	5 cut(s)	131, 250, 263, 294, 315
BspCNI	CTCAG	2 cut(s)	231, 1393
BspDI	ATCGAT	1 cut(s)	1107
BspFNI	CGCG	1 cut(s)	177
BspHI	TCATGA	2 cut(s)	936, 1218
BspLI	GGNNCC	4 cut(s)	145, 316, 326, 905
BspOI	GCTAGC	1 cut(s)	246
BspPI	GGATC	3 cut(s)	941, 1145, 1163
BspQI	GCTCTTC	1 cut(s)	948
BspT107I	GGYRCC	1 cut(s)	324
BsrDI	GCAATG	1 cut(s)	1345
BsrFI	RCCGGY	1 cut(s)	246
BsrI	ACTGG	2 cut(s)	89, 1058
BssAI	RCCGGY	1 cut(s)	246
BssECI	CCNNGG	4 cut(s)	264, 375, 616, 929
BssMI	GATC	6 cut(s)	676, 826, 861, 933, 1137, 1168
BssNI	GRCGYC	2 cut(s)	231, 325
BssT1I	CCWWGG	1 cut(s)	929
Bst2UI	CCWGG	4 cut(s)	72, 260, 296, 686
Bst4CI	ACNGT	2 cut(s)	1068, 1422
Bst6I	CTCTTC	4 cut(s)	35, 948, 1159, 1276
BstACI	GRCGYC	2 cut(s)	231, 325
BstBAI	YACGTR	1 cut(s)	1082
BstC8I	GCNNGC	5 cut(s)	244, 248, 746, 1376, 1443
BstDEI	CTNAG	4 cut(s)	218, 645, 1401, 1446
BstF5I	GGATG	6 cut(s)	21, 191, 466, 513, 925, 1260
BstFNI	CGCG	1 cut(s)	177
BstH2I	RGCGCY	2 cut(s)	328, 652
BstHHI	GCGC	4 cut(s)	179, 327, 388, 651
BstKTI	GATC	6 cut(s)	679, 829, 864, 936, 1140, 1171
BstMAI	GTCTC	2 cut(s)	57, 193
BstMBI	GATC	6 cut(s)	676, 826, 861, 933, 1137, 1168
BstMWI	GCNNNNNNNGC	5 cut(s)	239, 291, 922, 1306, 1447
BstNI	CCWGG	4 cut(s)	72, 260, 296, 686
BstNSI	RCATGY	1 cut(s)	1399
BstSCI	CCNGG	5 cut(s)	70, 258, 294, 684, 1291
BstSLI	GKGCMC	1 cut(s)	612
BstUI	CGCG	1 cut(s)	177
BstV1I	GCAGC	3 cut(s)	126, 215, 881
BstX2I	RGATCY	1 cut(s)	1168
BstYI	RGATCY	1 cut(s)	1168
Bsu15I	ATCGAT	1 cut(s)	1107
BsuRI	GGCC	5 cut(s)	131, 250, 263, 294, 315
BsuTUI	ATCGAT	1 cut(s)	1107
BtgZI	GCGATG	1 cut(s)	95
BtrI	CACGTC	1 cut(s)	766
BtsCI	GGATG	6 cut(s)	21, 191, 466, 513, 925, 1260
BtsI	GCAGTG	1 cut(s)	389
BtsIMutI	CAGTG	2 cut(s)	389, 1418
Cac8I	GCNNGC	5 cut(s)	244, 248, 746, 1376, 1443
CciI	TCATGA	2 cut(s)	936, 1218
CfoI	GCGC	4 cut(s)	179, 327, 388, 651
Cfr10I	RCCGGY	1 cut(s)	246
Cfr13I	GGNCC	5 cut(s)	74, 143, 314, 620, 979
ClaI	ATCGAT	1 cut(s)	1107
CseI	GACGC	1 cut(s)	239
Csp6I	GTAC	4 cut(s)	173, 310, 815, 1456
CspCI	CAANNNNNGTGG	2 cut(s)	877, 912
CviAII	CATG	9 cut(s)	227, 286, 329, 749, 859, 937, 1219, 1247, 1396
CviQI	GTAC	4 cut(s)	173, 310, 815, 1456
DdeI	CTNAG	4 cut(s)	218, 645, 1401, 1446
DinI	GGCGCC	1 cut(s)	326
DpnI	GATC	6 cut(s)	678, 828, 863, 935, 1139, 1170
DpnII	GATC	6 cut(s)	676, 826, 861, 933, 1137, 1168
DraI	TTTAAA	1 cut(s)	1354
EaeI	YGGCCR	2 cut(s)	129, 248
Eam1104I	CTCTTC	4 cut(s)	35, 948, 1159, 1276
EarI	CTCTTC	4 cut(s)	35, 948, 1159, 1276
Ecl136II	GAGCTC	3 cut(s)	916, 958, 1363
Eco130I	CCWWGG	1 cut(s)	929
Eco147I	AGGCCT	1 cut(s)	263
Eco24I	GRGCYC	3 cut(s)	918, 960, 1365
Eco47I	GGWCC	4 cut(s)	74, 143, 620, 979
Eco47III	AGCGCT	1 cut(s)	650
Eco53kI	GAGCTC	3 cut(s)	916, 958, 1363
Eco57I	CTGAAG	3 cut(s)	449, 867, 1030
Eco72I	CACGTG	1 cut(s)	1082
Eco88I	CYCGRG	1 cut(s)	350
EcoICRI	GAGCTC	3 cut(s)	916, 958, 1363
EcoRI	GAATTC	1 cut(s)	1129
EcoRII	CCWGG	4 cut(s)	70, 258, 294, 684
EcoT14I	CCWWGG	1 cut(s)	929
EcoT38I	GRGCYC	3 cut(s)	918, 960, 1365
EgeI	GGCGCC	1 cut(s)	326
EheI	GGCGCC	1 cut(s)	326
ErhI	CCWWGG	1 cut(s)	929
FaeI	CATG	9 cut(s)	230, 289, 332, 752, 862, 940, 1222, 1250, 1399
FalI	AAGNNNNNCTT	2 cut(s)	1028, 1060
FaqI	GGGAC	3 cut(s)	348, 1061, 1257
FatI	CATG	9 cut(s)	226, 285, 328, 748, 858, 936, 1218, 1246, 1395
FbaI	TGATCA	2 cut(s)	676, 861
FblI	GTMKAC	1 cut(s)	762
Fnu4HI	GCNGC	3 cut(s)	115, 204, 870
FokI	GGATG	6 cut(s)	8, 178, 473, 520, 912, 1247
FriOI	GRGCYC	3 cut(s)	918, 960, 1365
Fsp4HI	GCNGC	3 cut(s)	115, 204, 870
FspBI	CTAG	9 cut(s)	164, 185, 243, 275, 726, 854, 1013, 1073, 1325
GlaI	GCGC	4 cut(s)	178, 326, 387, 650
GluI	GCNGC	3 cut(s)	115, 204, 870
GsuI	CTGGAG	2 cut(s)	707, 1174
HaeII	RGCGCY	2 cut(s)	328, 652
HaeIII	GGCC	5 cut(s)	131, 250, 263, 294, 315
HapII	CCGG	3 cut(s)	247, 582, 1292
HgaI	GACGC	1 cut(s)	239
HhaI	GCGC	4 cut(s)	179, 327, 388, 651
Hin1I	GRCGYC	2 cut(s)	231, 325
Hin1II	CATG	9 cut(s)	230, 289, 332, 752, 862, 940, 1222, 1250, 1399
Hin6I	GCGC	4 cut(s)	177, 325, 386, 649
HinP1I	GCGC	4 cut(s)	177, 325, 386, 649
HincII	GTYRAC	2 cut(s)	579, 718
HindII	GTYRAC	2 cut(s)	579, 718
HinfI	GANTC	5 cut(s)	4, 255, 943, 995, 1085
HpaII	CCGG	3 cut(s)	247, 582, 1292
HphI	GGTGA	1 cut(s)	1045
Hpy166II	GTNNAC	6 cut(s)	579, 710, 718, 763, 817, 1147
Hpy188I	TCNGA	7 cut(s)	221, 268, 1000, 1049, 1137, 1186, 1402
Hpy188III	TCNNGA	7 cut(s)	563, 824, 919, 937, 1153, 1208, 1219
Hpy8I	GTNNAC	6 cut(s)	579, 710, 718, 763, 817, 1147
HpyAV	CCTTC	6 cut(s)	18, 35, 390, 622, 1030, 1247
HpyCH4III	ACNGT	2 cut(s)	1068, 1422
HpyCH4IV	ACGT	4 cut(s)	500, 765, 1081, 1454
HpyCH4V	TGCA	5 cut(s)	345, 524, 1064, 1300, 1345
HpyF10VI	GCNNNNNNNGC	5 cut(s)	239, 291, 922, 1306, 1447
HpyF3I	CTNAG	4 cut(s)	218, 645, 1401, 1446
HpySE526I	ACGT	4 cut(s)	500, 765, 1081, 1454
Hsp92I	GRCGYC	2 cut(s)	231, 325
Hsp92II	CATG	9 cut(s)	230, 289, 332, 752, 862, 940, 1222, 1250, 1399
HspAI	GCGC	4 cut(s)	177, 325, 386, 649
KasI	GGCGCC	1 cut(s)	324
KroI	GCCGGC	1 cut(s)	246
KroNI	GCCGGC	1 cut(s)	248
Ksp22I	TGATCA	2 cut(s)	676, 861
Kzo9I	GATC	6 cut(s)	676, 826, 861, 933, 1137, 1168
LguI	GCTCTTC	1 cut(s)	948
LmnI	GCTCC	6 cut(s)	268, 584, 903, 963, 1360, 1368
Lsp1109I	GCAGC	3 cut(s)	126, 215, 881
LweI	GCATC	1 cut(s)	934
MaeI	CTAG	9 cut(s)	164, 185, 243, 275, 726, 854, 1013, 1073, 1325
MaeII	ACGT	4 cut(s)	500, 765, 1081, 1454
MaeIII	GTNAC	3 cut(s)	463, 768, 1068
MalI	GATC	6 cut(s)	678, 828, 863, 935, 1139, 1170
MboI	GATC	6 cut(s)	676, 826, 861, 933, 1137, 1168
MflI	RGATCY	1 cut(s)	1168
MhlI	GDGCHC	5 cut(s)	273, 612, 918, 960, 1365
MlsI	TGGCCA	1 cut(s)	131
MluCI	AATT	5 cut(s)	235, 555, 1129, 1199, 1301
MluNI	TGGCCA	1 cut(s)	131
Mly113I	GGCGCC	1 cut(s)	325
MlyI	GAGTC	2 cut(s)	13, 264
MmeI	TCCRAC	3 cut(s)	145, 418, 713
Mox20I	TGGCCA	1 cut(s)	131
MroNI	GCCGGC	1 cut(s)	246
MroXI	GAANNNNTTC	1 cut(s)	1203
MscI	TGGCCA	1 cut(s)	131
MseI	TTAA	4 cut(s)	486, 653, 779, 1353
Msp20I	TGGCCA	1 cut(s)	131
MspA1I	CMGCKG	1 cut(s)	1339
MspI	CCGG	3 cut(s)	247, 582, 1292
MspR9I	CCNGG	5 cut(s)	72, 260, 296, 686, 1293
Mva1269I	GAATGC	1 cut(s)	587
MvaI	CCWGG	4 cut(s)	72, 260, 296, 686
MvnI	CGCG	1 cut(s)	177
MwoI	GCNNNNNNNGC	5 cut(s)	239, 291, 922, 1306, 1447
NaeI	GCCGGC	1 cut(s)	248
NarI	GGCGCC	1 cut(s)	325
NciI	CCSGG	1 cut(s)	1293
NdeII	GATC	6 cut(s)	676, 826, 861, 933, 1137, 1168
NgoMIV	GCCGGC	1 cut(s)	246
NheI	GCTAGC	1 cut(s)	242
NlaIII	CATG	9 cut(s)	230, 289, 332, 752, 862, 940, 1222, 1250, 1399
NlaIV	GGNNCC	4 cut(s)	145, 316, 326, 905
NmeAIII	GCCGAG	3 cut(s)	331, 400, 937
NspI	RCATGY	1 cut(s)	1399
PaeR7I	CTCGAG	1 cut(s)	350
PagI	TCATGA	2 cut(s)	936, 1218
PceI	AGGCCT	1 cut(s)	263
PciI	ACATGT	1 cut(s)	1395
PciSI	GCTCTTC	1 cut(s)	948
PctI	GAATGC	1 cut(s)	587
PdiI	GCCGGC	1 cut(s)	248
PdmI	GAANNNNTTC	1 cut(s)	1203
PfeI	GAWTC	3 cut(s)	943, 995, 1085
PflMI	CCANNNNNTGG	4 cut(s)	95, 127, 967, 988
PfoI	TCCNGGA	2 cut(s)	70, 684
PkrI	GCNGC	3 cut(s)	116, 205, 871
PleI	GAGTC	2 cut(s)	12, 263
PluTI	GGCGCC	1 cut(s)	328
PmaCI	CACGTG	1 cut(s)	1082
PmlI	CACGTG	1 cut(s)	1082
PpsI	GAGTC	2 cut(s)	12, 263
Ppu21I	YACGTR	1 cut(s)	1082
PscI	ACATGT	1 cut(s)	1395
Psp124BI	GAGCTC	3 cut(s)	918, 960, 1365
Psp6I	CCWGG	4 cut(s)	70, 258, 294, 684
PspCI	CACGTG	1 cut(s)	1082
PspGI	CCWGG	4 cut(s)	70, 258, 294, 684
PspN4I	GGNNCC	4 cut(s)	145, 316, 326, 905
PspPI	GGNCC	5 cut(s)	74, 143, 314, 620, 979
PspXI	VCTCGAGB	1 cut(s)	350
PsuI	RGATCY	1 cut(s)	1168
PvuII	CAGCTG	1 cut(s)	1339
RsaI	GTAC	4 cut(s)	174, 311, 816, 1457
RsaNI	GTAC	4 cut(s)	173, 310, 815, 1456
SacI	GAGCTC	3 cut(s)	918, 960, 1365
SapI	GCTCTTC	1 cut(s)	948
SaqAI	TTAA	4 cut(s)	486, 653, 779, 1353
SatI	GCNGC	3 cut(s)	115, 204, 870
Sau3AI	GATC	6 cut(s)	676, 826, 861, 933, 1137, 1168
Sau96I	GGNCC	5 cut(s)	74, 143, 314, 620, 979
SchI	GAGTC	2 cut(s)	13, 264
ScrFI	CCNGG	5 cut(s)	72, 260, 296, 686, 1293
SduI	GDGCHC	5 cut(s)	273, 612, 918, 960, 1365
SfaNI	GCATC	1 cut(s)	934
SfoI	GGCGCC	1 cut(s)	326
Sfr274I	CTCGAG	1 cut(s)	350
SinI	GGWCC	4 cut(s)	74, 143, 620, 979
SlaI	CTCGAG	1 cut(s)	350
SmlI	CTYRAG	3 cut(s)	350, 919, 1021
SmoI	CTYRAG	3 cut(s)	350, 919, 1021
SpeI	ACTAGT	2 cut(s)	184, 1072
Sse9I	AATT	5 cut(s)	235, 555, 1129, 1199, 1301
SseBI	AGGCCT	1 cut(s)	263
SspDI	GGCGCC	1 cut(s)	324
SspMI	CTAG	9 cut(s)	164, 185, 243, 275, 726, 854, 1013, 1073, 1325
SstI	GAGCTC	3 cut(s)	918, 960, 1365
StuI	AGGCCT	1 cut(s)	263
StyD4I	CCNGG	5 cut(s)	70, 258, 294, 684, 1291
StyI	CCWWGG	1 cut(s)	929
TaaI	ACNGT	2 cut(s)	1068, 1422
TaiI	ACGT	4 cut(s)	503, 768, 1084, 1457
TaqI	TCGA	5 cut(s)	351, 368, 829, 1092, 1107
TaqII	GACCGA	1 cut(s)	608
TasI	AATT	5 cut(s)	235, 555, 1129, 1199, 1301
TatI	WGTACW	1 cut(s)	814
TfiI	GAWTC	3 cut(s)	943, 995, 1085
Tru1I	TTAA	4 cut(s)	486, 653, 779, 1353
Tru9I	TTAA	4 cut(s)	486, 653, 779, 1353
TscAI	CASTG	2 cut(s)	396, 1425
TseI	GCWGC	3 cut(s)	114, 203, 869
TspDTI	ATGAA	5 cut(s)	302, 797, 953, 1207, 1235
TspRI	CASTG	2 cut(s)	396, 1425
Van91I	CCANNNNNTGG	4 cut(s)	95, 127, 967, 988
VpaK11BI	GGWCC	4 cut(s)	74, 143, 620, 979
XapI	RAATTY	2 cut(s)	1129, 1199
XceI	RCATGY	1 cut(s)	1399
XcmI	CCANNNNNNNNNTGG	1 cut(s)	968
XhoI	CTCGAG	1 cut(s)	350
XmiI	GTMKAC	1 cut(s)	762
XmnI	GAANNNNTTC	1 cut(s)	1203
XspI	CTAG	9 cut(s)	164, 185, 243, 275, 726, 854, 1013, 1073, 1325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.