Rorug07G0208500

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
18356647 .. 18359104
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0208500.1

Sequence Viewer

Length: 1140 bp
ATGGGTAGCATAGCAACAAGGTGGAGGCTTCTGAGCGGCGAGAACGAGTGGGCGGGTTTATTGGATCCTCTCGATATTGATCTCCGCCGCTACATCATTCACTATGGTGAAAGGGCCGGAGCCATAGGCGATGGCTTCATCAAGGAAACAAAATCAAGCAACTGTGGACTTCCGCGATATGCAAAGAGCCAATTCTTCACCAAGGTGGGTTTGGAGAACTACAACCCTTATAAGTACGTGGTGAAGAAGTATTTGTATGCAGCAACAATGTTATCTCCCGGCAGATCGAACTGGTTGGCTTATGTTGCGGTGGCAACGGATGAGGGAAAGGAAGTGTTGGGGAGGAGGGACATTTTGATTTCATGGAGAGGAACTGTGCTGGACGAAGAGGCCGGAATTGATTTGTTGTTCGATTTAGTCTCGGCTTCTGATATTCTGGGAAGTGAGAGTGGAGCTAAGGTGCACCATGGTTGGCATTCCTATTACACTAATGTGGACCCTGTTTCTCCATACACTAAAACTAGTTGTAGAGACCAGGTTTTAGCTACAATTAGAGAAGTAGTGGACCAATACAAGGATGAGGAAATAAGCGTAACTGTCACTGGCTACAGCATGGGTGCTGCATTTGCAATCTTGAATGCAACGGACATTGTTTACAATAGATACAATGTGCCTACTGCATATCCAGATAAAGCCTGCCTTGTTACATCCATTGTGTTCGCTAGCCCTCGTCTCGGAGACGAAGGATTCAGAAAAGTATTCAGTAGTCTCGAAAACCTTCATGTCTTACGCATCACAAATCTCCACGATGTTATAACTATTCTACCGCCATCAAGCAGTTATGTTCACGTTGGAAAAGAGTTGGAAATCGACACTCTCAAATCTCCCTACTTGAAGGATGCATCGCAGTCCCTACACAATTTGGAAGTTTACCTTCATGGAGTTGCAGGAACACAAGGGATAAATGGTTTCAAATTGGAGGTTTATCGTGATCTTGCATTAGTGAACAAAAAGCTGGATGGTCTAAACGACGAACATAATGTAGTTGCTAATTGGTGGACAGAGAAGAACAAGTCTATGGTTCAAATGGATAATGGCTCCTGGGTTTTGATGGATCGTGAGAAAGATGATGATAATTGA

Protein Analysis

379

Amino Acids

42.51

Weight (kDa)

5.52

Isoelectric Point (pI)

28.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 120 - 278 2.1e-26 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000282)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 231, 815
AccBSI CCGCTC 1 cut(s) 36
AccII CGCG 1 cut(s) 175
AciI CCGC 7 cut(s) 36, 53, 85, 88, 173, 308, 827
AclWI GGATC 3 cut(s) 59, 72, 1122
AfaI GTAC 1 cut(s) 236
AfiI CCNNNNNNNGG 2 cut(s) 574, 734
AgsI TTSAA 4 cut(s) 637, 895, 973, 1085
AhlI ACTAGT 1 cut(s) 521
AjnI CCWGG 2 cut(s) 534, 1100
AleI CACNNNNGTG 3 cut(s) 105, 203, 491
AluBI AGCT 3 cut(s) 455, 545, 1015
AluI AGCT 3 cut(s) 455, 545, 1015
Alw21I GWGCWC 1 cut(s) 465
Alw26I GTCTC 5 cut(s) 424, 525, 732, 737, 773
Alw44I GTGCAC 1 cut(s) 461
AlwI GGATC 3 cut(s) 59, 72, 1122
AoxI GGCC 2 cut(s) 114, 390
ApaLI GTGCAC 1 cut(s) 461
ApeKI GCWGC 2 cut(s) 260, 620
Asp700I GAANNNNTTC 1 cut(s) 777
AspS9I GGNCC 3 cut(s) 114, 496, 565
AsuC2I CCSGG 1 cut(s) 279
AsuHPI GGTGA 3 cut(s) 119, 190, 253
AsuNHI GCTAGC 1 cut(s) 722
AvaII GGWCC 2 cut(s) 496, 565
BaeGI GKGCMC 1 cut(s) 465
BamHI GGATCC 1 cut(s) 64
Bbv12I GWGCWC 1 cut(s) 465
BbvI GCAGC 2 cut(s) 272, 607
BccI CCATC 4 cut(s) 125, 838, 1013, 1105
BciT130I CCWGG 2 cut(s) 536, 1102
BcnI CCSGG 1 cut(s) 279
BcoDI GTCTC 5 cut(s) 424, 525, 732, 737, 773
BcuI ACTAGT 1 cut(s) 521
BfaI CTAG 2 cut(s) 522, 723
BfmI CTRYAG 1 cut(s) 607
BisI GCNGC 4 cut(s) 37, 88, 261, 621
BlsI GCNGC 4 cut(s) 38, 89, 262, 622
Bme1390I CCNGG 3 cut(s) 279, 536, 1102
Bme18I GGWCC 2 cut(s) 496, 565
BmgT120I GGNCC 3 cut(s) 114, 496, 565
BmiI GGNNCC 4 cut(s) 66, 121, 498, 1099
BmrFI CCNGG 3 cut(s) 279, 536, 1102
BmsI GCATC 3 cut(s) 801, 889, 911
BmtI GCTAGC 1 cut(s) 726
Bpu10I CCTNAGC 1 cut(s) 456
BpuMI CCSGG 1 cut(s) 279
BsaAI YACGTR 1 cut(s) 238
BsaBI GATNNNNATC 1 cut(s) 78
BsaI GGTCTC 1 cut(s) 525
BsaJI CCNNGG 3 cut(s) 201, 466, 1101
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
Bsc4I CCNNNNNNNGG 2 cut(s) 574, 734
Bse1I ACTGG 2 cut(s) 296, 607
Bse8I GATNNNNATC 1 cut(s) 78
BseBI CCWGG 2 cut(s) 536, 1102
BseDI CCNNGG 3 cut(s) 201, 466, 1101
BseGI GGATG 5 cut(s) 325, 583, 707, 904, 1024
BseJI GATNNNNATC 1 cut(s) 78
BseLI CCNNNNNNNGG 2 cut(s) 574, 734
BseMII CTCAG 1 cut(s) 23
BseNI ACTGG 2 cut(s) 296, 607
BseRI GAGGAG 1 cut(s) 358
BseSI GKGCMC 1 cut(s) 465
BseXI GCAGC 2 cut(s) 272, 607
Bsh1236I CGCG 1 cut(s) 175
BshFI GGCC 2 cut(s) 116, 392
BsiHKAI GWGCWC 1 cut(s) 465
BsiSI CCGG 3 cut(s) 117, 279, 393
BslFI GGGAC 2 cut(s) 362, 895
BslI CCNNNNNNNGG 2 cut(s) 574, 734
BsmAI GTCTC 5 cut(s) 424, 525, 732, 737, 773
BsmBI CGTCTC 2 cut(s) 732, 737
BsmFI GGGAC 2 cut(s) 362, 895
BsmI GAATGC 2 cut(s) 475, 643
BsnI GGCC 2 cut(s) 116, 392
Bso31I GGTCTC 1 cut(s) 525
Bsp1286I GDGCHC 1 cut(s) 465
Bsp143I GATC 5 cut(s) 64, 79, 284, 991, 1114
Bsp19I CCATGG 1 cut(s) 466
BspACI CCGC 7 cut(s) 36, 53, 85, 88, 173, 308, 827
BspANI GGCC 2 cut(s) 116, 392
BspCNI CTCAG 1 cut(s) 24
BspFNI CGCG 1 cut(s) 175
BspLI GGNNCC 4 cut(s) 66, 121, 498, 1099
BspOI GCTAGC 1 cut(s) 726
BspPI GGATC 3 cut(s) 59, 72, 1122
BspTNI GGTCTC 1 cut(s) 525
BsrBI CCGCTC 1 cut(s) 36
BsrI ACTGG 2 cut(s) 296, 607
BssECI CCNNGG 3 cut(s) 201, 466, 1101
BssMI GATC 5 cut(s) 64, 79, 284, 991, 1114
BssT1I CCWWGG 2 cut(s) 201, 466
Bst2UI CCWGG 2 cut(s) 536, 1102
Bst4CI ACNGT 3 cut(s) 164, 376, 598
Bst6I CTCTTC 1 cut(s) 381
BstBAI YACGTR 1 cut(s) 238
BstC8I GCNNGC 2 cut(s) 697, 724
BstDEI CTNAG 2 cut(s) 32, 456
BstDSI CCRYGG 1 cut(s) 466
BstF5I GGATG 5 cut(s) 325, 583, 707, 904, 1024
BstFNI CGCG 1 cut(s) 175
BstKTI GATC 5 cut(s) 67, 82, 287, 994, 1117
BstMAI GTCTC 5 cut(s) 424, 525, 732, 737, 773
BstMBI GATC 5 cut(s) 64, 79, 284, 991, 1114
BstMWI GCNNNNNNNGC 2 cut(s) 305, 626
BstNI CCWGG 2 cut(s) 536, 1102
BstSCI CCNGG 3 cut(s) 277, 534, 1100
BstSFI CTRYAG 1 cut(s) 607
BstSLI GKGCMC 1 cut(s) 465
BstUI CGCG 1 cut(s) 175
BstV1I GCAGC 2 cut(s) 272, 607
BstX2I RGATCY 1 cut(s) 64
BstYI RGATCY 1 cut(s) 64
BsuRI GGCC 2 cut(s) 116, 392
BtgI CCRYGG 1 cut(s) 466
BtgZI GCGATG 2 cut(s) 144, 888
BtsCI GGATG 5 cut(s) 325, 583, 707, 904, 1024
BtsIMutI CAGTG 1 cut(s) 600
Cac8I GCNNGC 2 cut(s) 697, 724
Cfr13I GGNCC 3 cut(s) 114, 496, 565
CsiI ACCWGGT 1 cut(s) 534
Csp6I GTAC 1 cut(s) 235
CviAII CATG 5 cut(s) 363, 467, 613, 782, 938
CviQI GTAC 1 cut(s) 235
DdeI CTNAG 2 cut(s) 32, 456
DpnI GATC 5 cut(s) 66, 81, 286, 993, 1116
DpnII GATC 5 cut(s) 64, 79, 284, 991, 1114
Eam1104I CTCTTC 1 cut(s) 381
EarI CTCTTC 1 cut(s) 381
EciI GGCGGA 1 cut(s) 74
Eco130I CCWWGG 2 cut(s) 201, 466
Eco31I GGTCTC 1 cut(s) 525
Eco47I GGWCC 2 cut(s) 496, 565
EcoRII CCWGG 2 cut(s) 534, 1100
EcoT14I CCWWGG 2 cut(s) 201, 466
EcoT22I ATGCAT 1 cut(s) 904
ErhI CCWWGG 2 cut(s) 201, 466
Esp3I CGTCTC 2 cut(s) 732, 737
FaeI CATG 5 cut(s) 366, 470, 616, 785, 941
FalI AAGNNNNNCTT 4 cut(s) 684, 716, 918, 950
FaqI GGGAC 2 cut(s) 362, 895
FatI CATG 5 cut(s) 362, 466, 612, 781, 937
FauI CCCGC 1 cut(s) 46
Fnu4HI GCNGC 4 cut(s) 37, 88, 261, 621
FokI GGATG 5 cut(s) 332, 590, 694, 911, 1031
Fsp4HI GCNGC 4 cut(s) 37, 88, 261, 621
FspBI CTAG 2 cut(s) 522, 723
GluI GCNGC 4 cut(s) 37, 88, 261, 621
HaeIII GGCC 2 cut(s) 116, 392
HapII CCGG 3 cut(s) 117, 279, 393
Hin1II CATG 5 cut(s) 366, 470, 616, 785, 941
HinfI GANTC 1 cut(s) 747
HpaII CCGG 3 cut(s) 117, 279, 393
HphI GGTGA 3 cut(s) 119, 190, 253
Hpy166II GTNNAC 9 cut(s) 167, 463, 496, 565, 655, 847, 931, 1006, 1059
Hpy188I TCNGA 4 cut(s) 33, 430, 737, 752
Hpy188III TCNNGA 6 cut(s) 71, 634, 686, 770, 989, 1118
Hpy8I GTNNAC 9 cut(s) 167, 463, 496, 565, 655, 847, 931, 1006, 1059
Hpy99I CGWCG 1 cut(s) 1034
HpyAV CCTTC 4 cut(s) 737, 788, 889, 944
HpyCH4III ACNGT 3 cut(s) 164, 376, 598
HpyCH4IV ACGT 2 cut(s) 237, 849
HpyF10VI GCNNNNNNNGC 2 cut(s) 305, 626
HpyF3I CTNAG 2 cut(s) 32, 456
HpySE526I ACGT 2 cut(s) 237, 849
Hsp92II CATG 5 cut(s) 366, 470, 616, 785, 941
Kzo9I GATC 5 cut(s) 64, 79, 284, 991, 1114
LmnI GCTCC 3 cut(s) 119, 452, 1103
Lsp1109I GCAGC 2 cut(s) 272, 607
LweI GCATC 3 cut(s) 801, 889, 911
MabI ACCWGGT 1 cut(s) 534
MaeI CTAG 2 cut(s) 522, 723
MaeII ACGT 2 cut(s) 237, 849
MaeIII GTNAC 3 cut(s) 592, 598, 703
MalI GATC 5 cut(s) 66, 81, 286, 993, 1116
MbiI CCGCTC 1 cut(s) 36
MboI GATC 5 cut(s) 64, 79, 284, 991, 1114
MboII GAAGA 4 cut(s) 187, 256, 398, 1078
MflI RGATCY 1 cut(s) 64
MhlI GDGCHC 1 cut(s) 465
MluCI AATT 7 cut(s) 191, 396, 549, 919, 974, 1051, 1135
MmeI TCCRAC 2 cut(s) 832, 843
Mph1103I ATGCAT 1 cut(s) 904
MroXI GAANNNNTTC 1 cut(s) 777
MslI CAYNNNNRTG 3 cut(s) 105, 203, 491
MspI CCGG 3 cut(s) 117, 279, 393
MspR9I CCNGG 3 cut(s) 279, 536, 1102
Mva1269I GAATGC 2 cut(s) 475, 643
MvaI CCWGG 2 cut(s) 536, 1102
MvnI CGCG 1 cut(s) 175
MwoI GCNNNNNNNGC 2 cut(s) 305, 626
NciI CCSGG 1 cut(s) 279
NcoI CCATGG 1 cut(s) 466
NdeII GATC 5 cut(s) 64, 79, 284, 991, 1114
NheI GCTAGC 1 cut(s) 722
NlaIII CATG 5 cut(s) 366, 470, 616, 785, 941
NlaIV GGNNCC 4 cut(s) 66, 121, 498, 1099
NmeAIII GCCGAG 1 cut(s) 401
NmuCI GTSAC 1 cut(s) 598
NsiI ATGCAT 1 cut(s) 904
OliI CACNNNNGTG 3 cut(s) 105, 203, 491
PctI GAATGC 2 cut(s) 475, 643
PdmI GAANNNNTTC 1 cut(s) 777
PfeI GAWTC 1 cut(s) 747
PkrI GCNGC 4 cut(s) 38, 89, 262, 622
Ppu21I YACGTR 1 cut(s) 238
PsiI TTATAA 2 cut(s) 231, 815
Psp6I CCWGG 2 cut(s) 534, 1100
PspGI CCWGG 2 cut(s) 534, 1100
PspN4I GGNNCC 4 cut(s) 66, 121, 498, 1099
PspPI GGNCC 3 cut(s) 114, 496, 565
PsuI RGATCY 1 cut(s) 64
RsaI GTAC 1 cut(s) 236
RsaNI GTAC 1 cut(s) 235
RseI CAYNNNNRTG 3 cut(s) 105, 203, 491
SatI GCNGC 4 cut(s) 37, 88, 261, 621
Sau3AI GATC 5 cut(s) 64, 79, 284, 991, 1114
Sau96I GGNCC 3 cut(s) 114, 496, 565
ScrFI CCNGG 3 cut(s) 279, 536, 1102
SduI GDGCHC 1 cut(s) 465
SexAI ACCWGGT 1 cut(s) 534
SfaNI GCATC 3 cut(s) 801, 889, 911
SfcI CTRYAG 1 cut(s) 607
SinI GGWCC 2 cut(s) 496, 565
SmiMI CAYNNNNRTG 3 cut(s) 105, 203, 491
SpeI ACTAGT 1 cut(s) 521
Sse9I AATT 7 cut(s) 191, 396, 549, 919, 974, 1051, 1135
SsiI CCGC 7 cut(s) 36, 53, 85, 88, 173, 308, 827
SspMI CTAG 2 cut(s) 522, 723
StyD4I CCNGG 3 cut(s) 277, 534, 1100
StyI CCWWGG 2 cut(s) 201, 466
TaaI ACNGT 3 cut(s) 164, 376, 598
TaiI ACGT 2 cut(s) 240, 852
TaqI TCGA 5 cut(s) 72, 287, 411, 771, 870
TasI AATT 7 cut(s) 191, 396, 549, 919, 974, 1051, 1135
TauI GCSGC 2 cut(s) 39, 90
TfiI GAWTC 1 cut(s) 747
TscAI CASTG 1 cut(s) 607
TseFI GTSAC 1 cut(s) 598
TseI GCWGC 2 cut(s) 260, 620
Tsp45I GTSAC 1 cut(s) 598
TspDTI ATGAA 4 cut(s) 127, 351, 770, 926
TspGWI ACGGA 2 cut(s) 332, 659
TspRI CASTG 1 cut(s) 607
VneI GTGCAC 1 cut(s) 461
VpaK11BI GGWCC 2 cut(s) 496, 565
XcmI CCANNNNNNNNNTGG 1 cut(s) 208
XmnI GAANNNNTTC 1 cut(s) 777
XspI CTAG 2 cut(s) 522, 723
Zsp2I ATGCAT 1 cut(s) 904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.