Rmu_sc0030128.1_g000001

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0030128.1
Physical Location & Seq
Reverse (-)
835 .. 2532
1698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0030128.1_g000001.1.cds

Sequence Viewer

Length: 996 bp
ctgggagtgctgccgagaaagctcaagaaagctgcagaggaaggtggtgttgtggatgttagtgaggatattggtgtgatgaatgaggacattacgtacaggatggtgttgagttgtaaaagggatgatcagtttgatttgaaagccatcgttgaggaaacatctttcttggctggggctttcaatatatctgattttgttccttcccttggtgcacttgatattcaggggttgactaagcgaatgaagaaagttagcaagacaatcgatcagctcttggagaagataattgacgaccatgaacaagttgctaaaactacgagtgggaaacaaggtaagcatgagcactttgtagacgtcttgctttcattaatgaaccaaccgttgaacccgaatgatgagcaagttcattttcttgatcgaacaaatgtgaaagccatcttactagacatgcttacggcggcttctgatacttcggcctcatcgattgtttggagcctttccgagctcttgaggcatccaagggtcatgaagaaactccaaaaagagctccaaactgtggttggcatggaccgaatggtggaagaaactgatttgccaaagctagattacttgaatatggacattgcaatagatggatacgacatacctaagaagtcgcggatcattgtaaacatctggagcattggaagagatcctagtgtatggtcgaaaaatgttgaggaattttatcctgaaaggttcatgaacaacaatatagaactccggggacatgactttcagctcatcccatttgggtctggccgaagaggttgtccaggtctgcaattagggctaaccacagttcggatagttctggcacagctggtgcactgctttaactgggagctcccaaccggcatgctacctcaagacttggacatgtctgagaaattcggtttatctatgtcgaaggccaaacacttgcttgctaagccgacctaccgtcttctgtag

Protein Analysis

331

Amino Acids

37.38

Weight (kDa)

5.96

Isoelectric Point (pI)

36.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000282)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 360
AccB7I CCANNNNNTGG 1 cut(s) 559
AccI GTMKAC 1 cut(s) 354
AccII CGCG 1 cut(s) 661
AciI CCGC 2 cut(s) 461, 661
AclWI GGATC 2 cut(s) 671, 689
AcoI YGGCCR 1 cut(s) 802
AcsI RAATTY 2 cut(s) 725, 932
AcyI GRCGYC 1 cut(s) 357
AfaI GTAC 1 cut(s) 98
AfiI CCNNNNNNNGG 4 cut(s) 209, 559, 580, 846
AflIII ACRYGT 1 cut(s) 921
AgsI TTSAA 4 cut(s) 142, 184, 388, 616
AhdI GACNNNNNGTC 1 cut(s) 984
AjnI CCWGG 1 cut(s) 817
AluBI AGCT 9 cut(s) 22, 32, 274, 508, 550, 604, 784, 865, 889
AluI AGCT 9 cut(s) 22, 32, 274, 508, 550, 604, 784, 865, 889
Alw21I GWGCWC 6 cut(s) 217, 348, 510, 552, 873, 891
Alw44I GTGCAC 2 cut(s) 213, 869
AlwI GGATC 2 cut(s) 671, 689
AoxI GGCC 3 cut(s) 477, 802, 954
ApaLI GTGCAC 2 cut(s) 213, 869
ApeKI GCWGC 2 cut(s) 10, 32
ApoI RAATTY 2 cut(s) 725, 932
ArsI GACNNNNNNTTYG 2 cut(s) 799, 831
AseI ATTAAT 1 cut(s) 371
AspS9I GGNCC 1 cut(s) 571
AsuC2I CCSGG 1 cut(s) 767
AvaII GGWCC 1 cut(s) 571
BaeGI GKGCMC 2 cut(s) 217, 873
BanII GRGCYC 3 cut(s) 510, 552, 891
BbsI GAAGAC 1 cut(s) 980
Bbv12I GWGCWC 6 cut(s) 217, 348, 510, 552, 873, 891
BbvI GCAGC 1 cut(s) 19
BccI CCATC 4 cut(s) 97, 155, 446, 629
BceAI ACGGC 1 cut(s) 474
BcgI CGANNNNNNTGC 2 cut(s) 247, 281
BciT130I CCWGG 1 cut(s) 819
BciVI GTATCC 1 cut(s) 632
BclI TGATCA 1 cut(s) 127
BcnI CCSGG 1 cut(s) 767
BfaI CTAG 3 cut(s) 446, 605, 699
BfmI CTRYAG 2 cut(s) 33, 992
BfuI GTATCC 1 cut(s) 632
BisI GCNGC 3 cut(s) 11, 33, 462
BlpI GCTNAGC 1 cut(s) 972
BlsI GCNGC 3 cut(s) 12, 34, 463
Bme1390I CCNGG 2 cut(s) 767, 819
Bme18I GGWCC 1 cut(s) 571
BmeRI GACNNNNNGTC 1 cut(s) 984
BmgT120I GGNCC 1 cut(s) 571
BmiI GGNNCC 1 cut(s) 497
BmrFI CCNGG 2 cut(s) 767, 819
BmrI ACTGGG 1 cut(s) 892
BmsI GCATC 1 cut(s) 526
BmuI ACTGGG 1 cut(s) 892
BpiI GAAGAC 1 cut(s) 980
BpmI CTGGAG 1 cut(s) 700
Bpu1102I GCTNAGC 1 cut(s) 972
BpuEI CTTGAG 3 cut(s) 8, 532, 894
BpuMI CCSGG 1 cut(s) 767
Bsa29I ATCGAT 2 cut(s) 267, 485
BsaAI YACGTR 1 cut(s) 96
BsaHI GRCGYC 1 cut(s) 357
BsaJI CCNNGG 3 cut(s) 208, 521, 766
Bsc4I CCNNNNNNNGG 4 cut(s) 209, 559, 580, 846
Bse118I RCCGGY 1 cut(s) 896
Bse1I ACTGG 1 cut(s) 887
Bse3DI GCAATG 1 cut(s) 624
BseBI CCWGG 1 cut(s) 819
BseCI ATCGAT 2 cut(s) 267, 485
BseDI CCNNGG 3 cut(s) 208, 521, 766
BseGI GGATG 5 cut(s) 61, 108, 130, 517, 786
BseLI CCNNNNNNNGG 4 cut(s) 209, 559, 580, 846
BseMI GCAATG 1 cut(s) 624
BseMII CTCAG 1 cut(s) 918
BseNI ACTGG 1 cut(s) 887
BseSI GKGCMC 2 cut(s) 217, 873
BseXI GCAGC 1 cut(s) 19
BseYI CCCAGC 1 cut(s) 173
Bsh1236I CGCG 1 cut(s) 661
BshFI GGCC 3 cut(s) 479, 804, 956
BshVI ATCGAT 2 cut(s) 267, 485
BsiHKAI GWGCWC 6 cut(s) 217, 348, 510, 552, 873, 891
BsiSI CCGG 2 cut(s) 766, 897
BslFI GGGAC 1 cut(s) 783
BslI CCNNNNNNNGG 4 cut(s) 209, 559, 580, 846
BsmFI GGGAC 1 cut(s) 783
BsnI GGCC 3 cut(s) 479, 804, 956
Bsp1286I GDGCHC 6 cut(s) 217, 348, 510, 552, 873, 891
Bsp143I GATC 5 cut(s) 127, 268, 418, 663, 694
Bsp1720I GCTNAGC 1 cut(s) 972
BspACI CCGC 2 cut(s) 461, 661
BspANI GGCC 3 cut(s) 479, 804, 956
BspCNI CTCAG 1 cut(s) 919
BspDI ATCGAT 2 cut(s) 267, 485
BspFNI CGCG 1 cut(s) 661
BspHI TCATGA 2 cut(s) 528, 744
BspLI GGNNCC 1 cut(s) 497
BspMAI CTGCAG 1 cut(s) 37
BspPI GGATC 2 cut(s) 671, 689
BsrDI GCAATG 1 cut(s) 624
BsrFI RCCGGY 1 cut(s) 896
BsrI ACTGG 1 cut(s) 887
BssAI RCCGGY 1 cut(s) 896
BssECI CCNNGG 3 cut(s) 208, 521, 766
BssMI GATC 5 cut(s) 127, 268, 418, 663, 694
BssNI GRCGYC 1 cut(s) 357
BssT1I CCWWGG 2 cut(s) 208, 521
Bst2UI CCWGG 1 cut(s) 819
Bst4CI ACNGT 4 cut(s) 384, 559, 844, 986
Bst6I CTCTTC 2 cut(s) 685, 802
BstACI GRCGYC 1 cut(s) 357
BstBAI YACGTR 1 cut(s) 96
BstC8I GCNNGC 2 cut(s) 902, 969
BstDEI CTNAG 4 cut(s) 237, 651, 927, 972
BstF5I GGATG 5 cut(s) 61, 108, 130, 517, 786
BstFNI CGCG 1 cut(s) 661
BstKTI GATC 5 cut(s) 130, 271, 421, 666, 697
BstMBI GATC 5 cut(s) 127, 268, 418, 663, 694
BstMWI GCNNNNNNNGC 4 cut(s) 19, 514, 832, 973
BstNI CCWGG 1 cut(s) 819
BstNSI RCATGY 3 cut(s) 454, 904, 925
BstSCI CCNGG 2 cut(s) 765, 817
BstSFI CTRYAG 2 cut(s) 33, 992
BstSLI GKGCMC 2 cut(s) 217, 873
BstSNI TACGTA 1 cut(s) 96
BstUI CGCG 1 cut(s) 661
BstV1I GCAGC 1 cut(s) 19
BstV2I GAAGAC 1 cut(s) 980
BstX2I RGATCY 1 cut(s) 694
BstYI RGATCY 1 cut(s) 694
Bsu15I ATCGAT 2 cut(s) 267, 485
BsuI GTATCC 1 cut(s) 632
BsuRI GGCC 3 cut(s) 479, 804, 956
BsuTUI ATCGAT 2 cut(s) 267, 485
BtsCI GGATG 5 cut(s) 61, 108, 130, 517, 786
BtsI GCAGTG 1 cut(s) 871
BtsIMutI CAGTG 1 cut(s) 871
Cac8I GCNNGC 2 cut(s) 902, 969
CciI TCATGA 2 cut(s) 528, 744
Cfr10I RCCGGY 1 cut(s) 896
Cfr13I GGNCC 1 cut(s) 571
ClaI ATCGAT 2 cut(s) 267, 485
Csp6I GTAC 1 cut(s) 97
CviAII CATG 9 cut(s) 299, 341, 451, 529, 568, 745, 773, 901, 922
CviQI GTAC 1 cut(s) 97
DdeI CTNAG 4 cut(s) 237, 651, 927, 972
DpnI GATC 5 cut(s) 129, 270, 420, 665, 696
DpnII GATC 5 cut(s) 127, 268, 418, 663, 694
DriI GACNNNNNGTC 1 cut(s) 984
EaeI YGGCCR 1 cut(s) 802
Eam1104I CTCTTC 2 cut(s) 685, 802
Eam1105I GACNNNNNGTC 1 cut(s) 984
EarI CTCTTC 2 cut(s) 685, 802
Ecl136II GAGCTC 3 cut(s) 508, 550, 889
Eco105I TACGTA 1 cut(s) 96
Eco130I CCWWGG 2 cut(s) 208, 521
Eco24I GRGCYC 3 cut(s) 510, 552, 891
Eco47I GGWCC 1 cut(s) 571
Eco53kI GAGCTC 3 cut(s) 508, 550, 889
EcoICRI GAGCTC 3 cut(s) 508, 550, 889
EcoRII CCWGG 1 cut(s) 817
EcoT14I CCWWGG 2 cut(s) 208, 521
EcoT38I GRGCYC 3 cut(s) 510, 552, 891
ErhI CCWWGG 2 cut(s) 208, 521
FaeI CATG 9 cut(s) 302, 344, 454, 532, 571, 748, 776, 904, 925
FaqI GGGAC 1 cut(s) 783
FatI CATG 9 cut(s) 298, 340, 450, 528, 567, 744, 772, 900, 921
FbaI TGATCA 1 cut(s) 127
FblI GTMKAC 1 cut(s) 354
Fnu4HI GCNGC 3 cut(s) 11, 33, 462
FokI GGATG 5 cut(s) 68, 115, 137, 504, 773
FriOI GRGCYC 3 cut(s) 510, 552, 891
Fsp4HI GCNGC 3 cut(s) 11, 33, 462
FspBI CTAG 3 cut(s) 446, 605, 699
GluI GCNGC 3 cut(s) 11, 33, 462
GsaI CCCAGC 1 cut(s) 177
GsuI CTGGAG 1 cut(s) 700
HaeIII GGCC 3 cut(s) 479, 804, 956
HapII CCGG 2 cut(s) 766, 897
Hin1I GRCGYC 1 cut(s) 357
Hin1II CATG 9 cut(s) 302, 344, 454, 532, 571, 748, 776, 904, 925
HincII GTYRAC 1 cut(s) 234
HindII GTYRAC 1 cut(s) 234
HpaII CCGG 2 cut(s) 766, 897
Hpy166II GTNNAC 5 cut(s) 215, 234, 355, 673, 871
Hpy188I TCNGA 5 cut(s) 193, 469, 505, 849, 928
Hpy188III TCNNGA 8 cut(s) 25, 416, 511, 529, 679, 734, 745, 911
Hpy8I GTNNAC 5 cut(s) 215, 234, 355, 673, 871
HpyAV CCTTC 3 cut(s) 35, 213, 946
HpyCH4III ACNGT 4 cut(s) 384, 559, 844, 986
HpyCH4IV ACGT 2 cut(s) 95, 357
HpyCH4V TGCA 5 cut(s) 35, 215, 629, 826, 871
HpyF10VI GCNNNNNNNGC 4 cut(s) 19, 514, 832, 973
HpyF3I CTNAG 4 cut(s) 237, 651, 927, 972
HpySE526I ACGT 2 cut(s) 95, 357
Hsp92I GRCGYC 1 cut(s) 357
Hsp92II CATG 9 cut(s) 302, 344, 454, 532, 571, 748, 776, 904, 925
Ksp22I TGATCA 1 cut(s) 127
Kzo9I GATC 5 cut(s) 127, 268, 418, 663, 694
LmnI GCTCC 5 cut(s) 495, 555, 681, 886, 894
Lsp1109I GCAGC 1 cut(s) 19
LweI GCATC 1 cut(s) 526
MaeI CTAG 3 cut(s) 446, 605, 699
MaeII ACGT 2 cut(s) 95, 357
MalI GATC 5 cut(s) 129, 270, 420, 665, 696
MboI GATC 5 cut(s) 127, 268, 418, 663, 694
MboII GAAGA 7 cut(s) 259, 295, 544, 596, 702, 819, 980
MflI RGATCY 1 cut(s) 694
MhlI GDGCHC 6 cut(s) 217, 348, 510, 552, 873, 891
MluCI AATT 4 cut(s) 288, 725, 827, 932
MnlI CCTC 9 cut(s) 31, 58, 79, 148, 490, 507, 715, 803, 918
MseI TTAA 2 cut(s) 371, 879
MspA1I CMGCKG 1 cut(s) 865
MspI CCGG 2 cut(s) 766, 897
MspR9I CCNGG 2 cut(s) 767, 819
MvaI CCWGG 1 cut(s) 819
MvnI CGCG 1 cut(s) 661
MwoI GCNNNNNNNGC 4 cut(s) 19, 514, 832, 973
NciI CCSGG 1 cut(s) 767
NdeII GATC 5 cut(s) 127, 268, 418, 663, 694
NlaIII CATG 9 cut(s) 302, 344, 454, 532, 571, 748, 776, 904, 925
NlaIV GGNNCC 1 cut(s) 497
NmeAIII GCCGAG 1 cut(s) 39
NspI RCATGY 3 cut(s) 454, 904, 925
PaeI GCATGC 1 cut(s) 904
PagI TCATGA 2 cut(s) 528, 744
PciI ACATGT 1 cut(s) 921
PcsI WCGNNNNNNNCGW 1 cut(s) 482
PflMI CCANNNNNTGG 1 cut(s) 559
PkrI GCNGC 3 cut(s) 12, 34, 463
Ppu21I YACGTR 1 cut(s) 96
PscI ACATGT 1 cut(s) 921
PshBI ATTAAT 1 cut(s) 371
Psp124BI GAGCTC 3 cut(s) 510, 552, 891
Psp6I CCWGG 1 cut(s) 817
PspFI CCCAGC 1 cut(s) 173
PspGI CCWGG 1 cut(s) 817
PspN4I GGNNCC 1 cut(s) 497
PspPI GGNCC 1 cut(s) 571
PstI CTGCAG 1 cut(s) 37
PsuI RGATCY 1 cut(s) 694
PvuII CAGCTG 1 cut(s) 865
RsaI GTAC 1 cut(s) 98
RsaNI GTAC 1 cut(s) 97
SacI GAGCTC 3 cut(s) 510, 552, 891
SaqAI TTAA 2 cut(s) 371, 879
SatI GCNGC 3 cut(s) 11, 33, 462
Sau3AI GATC 5 cut(s) 127, 268, 418, 663, 694
Sau96I GGNCC 1 cut(s) 571
ScrFI CCNGG 2 cut(s) 767, 819
SduI GDGCHC 6 cut(s) 217, 348, 510, 552, 873, 891
SfaNI GCATC 1 cut(s) 526
SfcI CTRYAG 2 cut(s) 33, 992
SinI GGWCC 1 cut(s) 571
SmlI CTYRAG 3 cut(s) 23, 511, 909
SmoI CTYRAG 3 cut(s) 23, 511, 909
SnaBI TACGTA 1 cut(s) 96
SphI GCATGC 1 cut(s) 904
Sse9I AATT 4 cut(s) 288, 725, 827, 932
SsiI CCGC 2 cut(s) 461, 661
SspMI CTAG 3 cut(s) 446, 605, 699
SstI GAGCTC 3 cut(s) 510, 552, 891
StyD4I CCNGG 2 cut(s) 765, 817
StyI CCWWGG 2 cut(s) 208, 521
TaaI ACNGT 4 cut(s) 384, 559, 844, 986
TaiI ACGT 2 cut(s) 98, 360
TaqI TCGA 5 cut(s) 267, 421, 485, 710, 950
TaqII GACCGA 1 cut(s) 588
TasI AATT 4 cut(s) 288, 725, 827, 932
TauI GCSGC 1 cut(s) 464
Tru1I TTAA 2 cut(s) 371, 879
Tru9I TTAA 2 cut(s) 371, 879
TscAI CASTG 1 cut(s) 878
TseI GCWGC 2 cut(s) 10, 32
TspDTI ATGAA 9 cut(s) 95, 260, 315, 357, 389, 398, 545, 733, 761
TspRI CASTG 1 cut(s) 878
Van91I CCANNNNNTGG 1 cut(s) 559
VneI GTGCAC 2 cut(s) 213, 869
VpaK11BI GGWCC 1 cut(s) 571
VspI ATTAAT 1 cut(s) 371
XapI RAATTY 2 cut(s) 725, 932
XceI RCATGY 3 cut(s) 454, 904, 925
XcmI CCANNNNNNNNNTGG 1 cut(s) 560
XmiI GTMKAC 1 cut(s) 354
XspI CTAG 3 cut(s) 446, 605, 699
ZraI GACGTC 1 cut(s) 358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.