RchiOBHm_Chr7g0185081

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
5327921 .. 5329904
1984 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16514

Sequence Viewer

Length: 984 bp
ATGAATGAGGACATTACGTACAGGATGGTGTTGGGTTGTAAAAGGGATGATCAGTTTGATTTGAAAGCCATCGTTGAGGAAACGTCTTTCTTGGCTGGGGCTTTCAATATATCTGATTTTGTTCCTTCCCTTGCTGCACTTGATATTCAGTGGTTGACTAAGCGAATGAGGAAAGTTAGCAAGACAATCGATCAGCTCTTAGAGAAGATAATTGACGACCATGAACAAGTTGCTAAAACTACGAGTGGGAAACAAGGCAAGCATGAGGACTTTGTAGACGTCTTGCTTTCATTAATGAACCAACCGTTGAACCCGAATGATGAGCAAGTTCATTTTCTTGATCGAACAAATGTGAAAGCCATCTTACTAGACATGCTTACGGCGGCTTTTGATACTTCGGCCTCATCGATTGTTTGGAGCCTTTCCGAGCTCTTAAGGCATCCAAGGGTCATGAAGAAACTCCAAAAAGAGCTCCAAACTGTAGTTGGCATGGACCGAATGGTGGAAGAGACTGATTTGCCAAAGCTAGATTACTTGAATATGGTGGTCAAGGAGAGCTTCAGACTACACCCAGTTGGACCATTACTAGTCCCACATGAATCTATCGAGGACATTGCAATAGATGGATACGACATACCTAAGAAGTCGCGGATCATTGTAAACATCTGGAGCATTGGAAGAGATCCTAGTGTATGGTCGGAAAATGTTGAGGAATTTTATCCTGAAAGGTTCATGAACAACAATATAGAACTCCGGGGACATGACTTTCAGCTCATCCCATTTGGGTCTGGCCGAAGAGGTTGTCTAGGTCTGCAATTAGGGCTAACCACAGTTCGGATAGTTCTGGCACAGCTGGTGCACTGCTTTAACTGGGAGCTCCCAACCGGCATGCTACCTCAAGACTTGGACATGTCTGAGAAATTCGGTTTATCAATGTCAAAGGCCAAACACTTGCTTGCTAAGCCGACCTACCGTCTTCTGTAG

Protein Analysis

327

Amino Acids

37.38

Weight (kDa)

5.64

Isoelectric Point (pI)

39.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 9 - 317 1.2e-75 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000282)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 282
AccI GTMKAC 1 cut(s) 276
AccII CGCG 1 cut(s) 649
AciI CCGC 2 cut(s) 383, 649
AclWI GGATC 2 cut(s) 659, 677
AcoI YGGCCR 1 cut(s) 790
AcsI RAATTY 2 cut(s) 713, 920
AcuI CTGAAG 1 cut(s) 544
AcyI GRCGYC 1 cut(s) 279
AfaI GTAC 1 cut(s) 20
AfiI CCNNNNNNNGG 2 cut(s) 502, 834
AflII CTTAAG 1 cut(s) 433
AflIII ACRYGT 1 cut(s) 909
AgsI TTSAA 4 cut(s) 64, 106, 310, 538
AhdI GACNNNNNGTC 1 cut(s) 972
AhlI ACTAGT 1 cut(s) 586
AluBI AGCT 8 cut(s) 196, 430, 472, 526, 558, 772, 853, 877
AluI AGCT 8 cut(s) 196, 430, 472, 526, 558, 772, 853, 877
Alw21I GWGCWC 4 cut(s) 432, 474, 861, 879
Alw26I GTCTC 1 cut(s) 503
Alw44I GTGCAC 1 cut(s) 857
AlwI GGATC 2 cut(s) 659, 677
AoxI GGCC 3 cut(s) 399, 790, 942
ApaLI GTGCAC 1 cut(s) 857
ApeKI GCWGC 1 cut(s) 134
ApoI RAATTY 2 cut(s) 713, 920
ArsI GACNNNNNNTTYG 2 cut(s) 787, 819
AseI ATTAAT 1 cut(s) 293
AspS9I GGNCC 2 cut(s) 493, 578
AsuC2I CCSGG 1 cut(s) 755
AvaII GGWCC 2 cut(s) 493, 578
BaeGI GKGCMC 1 cut(s) 861
BanII GRGCYC 3 cut(s) 432, 474, 879
BbsI GAAGAC 1 cut(s) 968
Bbv12I GWGCWC 4 cut(s) 432, 474, 861, 879
BbvI GCAGC 1 cut(s) 121
BccI CCATC 4 cut(s) 19, 77, 368, 617
BceAI ACGGC 1 cut(s) 396
BcgI CGANNNNNNTGC 4 cut(s) 169, 203, 596, 630
BciVI GTATCC 1 cut(s) 620
BclI TGATCA 1 cut(s) 49
BcnI CCSGG 1 cut(s) 755
BcoDI GTCTC 1 cut(s) 503
BcuI ACTAGT 1 cut(s) 586
BfaI CTAG 5 cut(s) 368, 527, 587, 687, 806
BfmI CTRYAG 2 cut(s) 480, 980
BfrI CTTAAG 1 cut(s) 433
BfuI GTATCC 1 cut(s) 620
BisI GCNGC 2 cut(s) 135, 384
BlpI GCTNAGC 1 cut(s) 960
BlsI GCNGC 2 cut(s) 136, 385
Bme1390I CCNGG 1 cut(s) 755
Bme18I GGWCC 2 cut(s) 493, 578
BmeRI GACNNNNNGTC 1 cut(s) 972
BmgT120I GGNCC 2 cut(s) 493, 578
BmiI GGNNCC 1 cut(s) 419
BmrFI CCNGG 1 cut(s) 755
BmrI ACTGGG 2 cut(s) 566, 880
BmsI GCATC 1 cut(s) 448
BmuI ACTGGG 2 cut(s) 566, 880
BpiI GAAGAC 1 cut(s) 968
BpmI CTGGAG 1 cut(s) 688
Bpu1102I GCTNAGC 1 cut(s) 960
BpuEI CTTGAG 1 cut(s) 882
BpuMI CCSGG 1 cut(s) 755
Bsa29I ATCGAT 2 cut(s) 189, 407
BsaAI YACGTR 1 cut(s) 18
BsaHI GRCGYC 1 cut(s) 279
BsaJI CCNNGG 2 cut(s) 443, 754
Bsc4I CCNNNNNNNGG 2 cut(s) 502, 834
Bse118I RCCGGY 1 cut(s) 884
Bse1I ACTGG 2 cut(s) 572, 875
Bse3DI GCAATG 1 cut(s) 612
BseCI ATCGAT 2 cut(s) 189, 407
BseDI CCNNGG 2 cut(s) 443, 754
BseGI GGATG 4 cut(s) 30, 52, 439, 774
BseLI CCNNNNNNNGG 2 cut(s) 502, 834
BseMI GCAATG 1 cut(s) 612
BseMII CTCAG 1 cut(s) 906
BseNI ACTGG 2 cut(s) 572, 875
BseSI GKGCMC 1 cut(s) 861
BseXI GCAGC 1 cut(s) 121
BseYI CCCAGC 1 cut(s) 95
BsgI GTGCAG 1 cut(s) 120
Bsh1236I CGCG 1 cut(s) 649
BshFI GGCC 3 cut(s) 401, 792, 944
BshVI ATCGAT 2 cut(s) 189, 407
BsiHKAI GWGCWC 4 cut(s) 432, 474, 861, 879
BsiSI CCGG 2 cut(s) 754, 885
BslFI GGGAC 2 cut(s) 575, 771
BslI CCNNNNNNNGG 2 cut(s) 502, 834
BsmAI GTCTC 1 cut(s) 503
BsmFI GGGAC 2 cut(s) 575, 771
BsnI GGCC 3 cut(s) 401, 792, 944
Bsp1286I GDGCHC 4 cut(s) 432, 474, 861, 879
Bsp143I GATC 5 cut(s) 49, 190, 340, 651, 682
Bsp1720I GCTNAGC 1 cut(s) 960
BspACI CCGC 2 cut(s) 383, 649
BspANI GGCC 3 cut(s) 401, 792, 944
BspCNI CTCAG 1 cut(s) 907
BspDI ATCGAT 2 cut(s) 189, 407
BspFNI CGCG 1 cut(s) 649
BspHI TCATGA 2 cut(s) 450, 732
BspLI GGNNCC 1 cut(s) 419
BspPI GGATC 2 cut(s) 659, 677
BspTI CTTAAG 1 cut(s) 433
BsrDI GCAATG 1 cut(s) 612
BsrFI RCCGGY 1 cut(s) 884
BsrI ACTGG 2 cut(s) 572, 875
BssAI RCCGGY 1 cut(s) 884
BssECI CCNNGG 2 cut(s) 443, 754
BssMI GATC 5 cut(s) 49, 190, 340, 651, 682
BssNI GRCGYC 1 cut(s) 279
BssT1I CCWWGG 1 cut(s) 443
Bst4CI ACNGT 4 cut(s) 306, 481, 832, 974
Bst6I CTCTTC 3 cut(s) 501, 673, 790
BstACI GRCGYC 1 cut(s) 279
BstAFI CTTAAG 1 cut(s) 433
BstBAI YACGTR 1 cut(s) 18
BstC8I GCNNGC 3 cut(s) 260, 890, 957
BstDEI CTNAG 5 cut(s) 159, 199, 639, 915, 960
BstF5I GGATG 4 cut(s) 30, 52, 439, 774
BstFNI CGCG 1 cut(s) 649
BstKTI GATC 5 cut(s) 52, 193, 343, 654, 685
BstMAI GTCTC 1 cut(s) 503
BstMBI GATC 5 cut(s) 49, 190, 340, 651, 682
BstMWI GCNNNNNNNGC 3 cut(s) 436, 820, 961
BstNSI RCATGY 3 cut(s) 376, 892, 913
BstSCI CCNGG 1 cut(s) 753
BstSFI CTRYAG 2 cut(s) 480, 980
BstSLI GKGCMC 1 cut(s) 861
BstSNI TACGTA 1 cut(s) 18
BstUI CGCG 1 cut(s) 649
BstV1I GCAGC 1 cut(s) 121
BstV2I GAAGAC 1 cut(s) 968
BstX2I RGATCY 1 cut(s) 682
BstYI RGATCY 1 cut(s) 682
Bsu15I ATCGAT 2 cut(s) 189, 407
BsuI GTATCC 1 cut(s) 620
BsuRI GGCC 3 cut(s) 401, 792, 944
BsuTUI ATCGAT 2 cut(s) 189, 407
BtsCI GGATG 4 cut(s) 30, 52, 439, 774
BtsI GCAGTG 1 cut(s) 859
BtsIMutI CAGTG 2 cut(s) 155, 859
Cac8I GCNNGC 3 cut(s) 260, 890, 957
CciI TCATGA 2 cut(s) 450, 732
Cfr10I RCCGGY 1 cut(s) 884
Cfr13I GGNCC 2 cut(s) 493, 578
ClaI ATCGAT 2 cut(s) 189, 407
Csp6I GTAC 1 cut(s) 19
CviQI GTAC 1 cut(s) 19
DdeI CTNAG 5 cut(s) 159, 199, 639, 915, 960
DpnI GATC 5 cut(s) 51, 192, 342, 653, 684
DpnII GATC 5 cut(s) 49, 190, 340, 651, 682
DriI GACNNNNNGTC 1 cut(s) 972
EaeI YGGCCR 1 cut(s) 790
Eam1104I CTCTTC 3 cut(s) 501, 673, 790
Eam1105I GACNNNNNGTC 1 cut(s) 972
EarI CTCTTC 3 cut(s) 501, 673, 790
Ecl136II GAGCTC 3 cut(s) 430, 472, 877
Eco105I TACGTA 1 cut(s) 18
Eco130I CCWWGG 1 cut(s) 443
Eco24I GRGCYC 3 cut(s) 432, 474, 879
Eco47I GGWCC 2 cut(s) 493, 578
Eco53kI GAGCTC 3 cut(s) 430, 472, 877
Eco57I CTGAAG 1 cut(s) 544
EcoICRI GAGCTC 3 cut(s) 430, 472, 877
EcoT14I CCWWGG 1 cut(s) 443
EcoT38I GRGCYC 3 cut(s) 432, 474, 879
ErhI CCWWGG 1 cut(s) 443
FalI AAGNNNNNCTT 2 cut(s) 542, 574
FaqI GGGAC 2 cut(s) 575, 771
FbaI TGATCA 1 cut(s) 49
FblI GTMKAC 1 cut(s) 276
Fnu4HI GCNGC 2 cut(s) 135, 384
FokI GGATG 4 cut(s) 37, 59, 426, 761
FriOI GRGCYC 3 cut(s) 432, 474, 879
Fsp4HI GCNGC 2 cut(s) 135, 384
FspBI CTAG 5 cut(s) 368, 527, 587, 687, 806
GluI GCNGC 2 cut(s) 135, 384
GsaI CCCAGC 1 cut(s) 99
GsuI CTGGAG 1 cut(s) 688
HaeIII GGCC 3 cut(s) 401, 792, 944
HapII CCGG 2 cut(s) 754, 885
Hin1I GRCGYC 1 cut(s) 279
HincII GTYRAC 1 cut(s) 156
HindII GTYRAC 1 cut(s) 156
HinfI GANTC 1 cut(s) 599
HpaII CCGG 2 cut(s) 754, 885
Hpy166II GTNNAC 4 cut(s) 156, 277, 661, 859
Hpy188I TCNGA 6 cut(s) 115, 427, 563, 700, 837, 916
Hpy188III TCNNGA 6 cut(s) 338, 451, 667, 722, 733, 899
Hpy8I GTNNAC 4 cut(s) 156, 277, 661, 859
HpyAV CCTTC 1 cut(s) 135
HpyCH4III ACNGT 4 cut(s) 306, 481, 832, 974
HpyCH4IV ACGT 3 cut(s) 17, 83, 279
HpyCH4V TGCA 4 cut(s) 137, 617, 814, 859
HpyF10VI GCNNNNNNNGC 3 cut(s) 436, 820, 961
HpyF3I CTNAG 5 cut(s) 159, 199, 639, 915, 960
HpySE526I ACGT 3 cut(s) 17, 83, 279
Hsp92I GRCGYC 1 cut(s) 279
Ksp22I TGATCA 1 cut(s) 49
Kzo9I GATC 5 cut(s) 49, 190, 340, 651, 682
LmnI GCTCC 5 cut(s) 417, 477, 669, 874, 882
Lsp1109I GCAGC 1 cut(s) 121
LweI GCATC 1 cut(s) 448
MaeI CTAG 5 cut(s) 368, 527, 587, 687, 806
MaeII ACGT 3 cut(s) 17, 83, 279
MalI GATC 5 cut(s) 51, 192, 342, 653, 684
MboI GATC 5 cut(s) 49, 190, 340, 651, 682
MboII GAAGA 6 cut(s) 217, 466, 518, 690, 807, 968
MflI RGATCY 1 cut(s) 682
MhlI GDGCHC 4 cut(s) 432, 474, 861, 879
MluCI AATT 4 cut(s) 210, 713, 815, 920
MmeI TCCRAC 2 cut(s) 556, 678
MnlI CCTC 8 cut(s) 70, 162, 259, 412, 601, 703, 791, 906
MseI TTAA 3 cut(s) 293, 434, 867
MspA1I CMGCKG 1 cut(s) 853
MspCI CTTAAG 1 cut(s) 433
MspI CCGG 2 cut(s) 754, 885
MspR9I CCNGG 1 cut(s) 755
MvnI CGCG 1 cut(s) 649
MwoI GCNNNNNNNGC 3 cut(s) 436, 820, 961
NciI CCSGG 1 cut(s) 755
NdeII GATC 5 cut(s) 49, 190, 340, 651, 682
NlaIV GGNNCC 1 cut(s) 419
NspI RCATGY 3 cut(s) 376, 892, 913
PaeI GCATGC 1 cut(s) 892
PagI TCATGA 2 cut(s) 450, 732
PciI ACATGT 1 cut(s) 909
PcsI WCGNNNNNNNCGW 1 cut(s) 404
PfeI GAWTC 1 cut(s) 599
PkrI GCNGC 2 cut(s) 136, 385
Ppu21I YACGTR 1 cut(s) 18
PscI ACATGT 1 cut(s) 909
PshBI ATTAAT 1 cut(s) 293
Psp124BI GAGCTC 3 cut(s) 432, 474, 879
PspFI CCCAGC 1 cut(s) 95
PspN4I GGNNCC 1 cut(s) 419
PspPI GGNCC 2 cut(s) 493, 578
PsuI RGATCY 1 cut(s) 682
PvuII CAGCTG 1 cut(s) 853
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
SacI GAGCTC 3 cut(s) 432, 474, 879
SaqAI TTAA 3 cut(s) 293, 434, 867
SatI GCNGC 2 cut(s) 135, 384
Sau3AI GATC 5 cut(s) 49, 190, 340, 651, 682
Sau96I GGNCC 2 cut(s) 493, 578
ScrFI CCNGG 1 cut(s) 755
SduI GDGCHC 4 cut(s) 432, 474, 861, 879
SfaNI GCATC 1 cut(s) 448
SfcI CTRYAG 2 cut(s) 480, 980
SinI GGWCC 2 cut(s) 493, 578
SmlI CTYRAG 2 cut(s) 433, 897
SmoI CTYRAG 2 cut(s) 433, 897
SnaBI TACGTA 1 cut(s) 18
SpeI ACTAGT 1 cut(s) 586
SphI GCATGC 1 cut(s) 892
Sse9I AATT 4 cut(s) 210, 713, 815, 920
SsiI CCGC 2 cut(s) 383, 649
SspMI CTAG 5 cut(s) 368, 527, 587, 687, 806
SstI GAGCTC 3 cut(s) 432, 474, 879
StyD4I CCNGG 1 cut(s) 753
StyI CCWWGG 1 cut(s) 443
TaaI ACNGT 4 cut(s) 306, 481, 832, 974
TaiI ACGT 3 cut(s) 20, 86, 282
TaqI TCGA 4 cut(s) 189, 343, 407, 606
TaqII GACCGA 1 cut(s) 510
TasI AATT 4 cut(s) 210, 713, 815, 920
TauI GCSGC 1 cut(s) 386
TfiI GAWTC 1 cut(s) 599
Tru1I TTAA 3 cut(s) 293, 434, 867
Tru9I TTAA 3 cut(s) 293, 434, 867
TscAI CASTG 2 cut(s) 155, 866
TseI GCWGC 1 cut(s) 134
TspDTI ATGAA 9 cut(s) 17, 237, 279, 311, 320, 467, 612, 721, 749
TspRI CASTG 2 cut(s) 155, 866
Vha464I CTTAAG 1 cut(s) 433
VneI GTGCAC 1 cut(s) 857
VpaK11BI GGWCC 2 cut(s) 493, 578
VspI ATTAAT 1 cut(s) 293
XapI RAATTY 2 cut(s) 713, 920
XceI RCATGY 3 cut(s) 376, 892, 913
XcmI CCANNNNNNNNNTGG 1 cut(s) 482
XmiI GTMKAC 1 cut(s) 276
XspI CTAG 5 cut(s) 368, 527, 587, 687, 806
ZraI GACGTC 1 cut(s) 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.