Rh7BG070900

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
4810995 .. 4812614
1620 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG070900.1

Sequence Viewer

Length: 993 bp
ATGACCCATATTTCTCATTATCCCTCTCAGCAACTCCACACAAAACAGAAAGCCAAGCCAGAAAAGATGAGTCCTACAACAATAATAGCCATCCTCCTGGTTCTCCTCACATGCCTTTGGTCACTCATCTCTGCTTCCTCCAAATCAAAACACAAAAAACTACCACCCGGCCCTCGGTCACTGCCAATAATCGGAAATCTCCACATGCTAGGCAACCTCCCCCATCGAAGCCTCCAACGCCTGGCCAAAAAATATGGACACATCATGTCCATCCGTCTAGGCAGTGTTCCGACCATAGTAGTCTCCTCCCCAAAAGCCGCAGAGCTATTCCTCAAAACTCATGACACTAATTTCGCCAGCCGGCCCAAAATCCAAGCCTCGGAGTACATATCCTACGGCACAAAGGGCATGGCCTTTTCCGAATATGGTCCCTATTGGCGCCATGTAAGGAAGCTCTGTACGCTTCAGCTTTTCTGTCCAGCAAAAATAGAGGCTTTCGCGCCGCTGAGAAAGGATGAGCTGGGAGTGCTGCTGAGAAAGCTCAAGAAAGCTGCAGAGGAAGGTGGTGTTGTGGATGTTAGTGAGGATATTGGTGTGATGAATGAGGACATTACGTACAGGATGGTGTTGGGTTGTAAAAGGGATGATCAGTTTGATTTGAAAGCCATTGTTGAGGAAACGTCTTTCTTGGCTGGGGCTTTCAATATATCTGATTTTGTTCCTTCCCTTGCTGCACTTGATATTCAGGGGTTGACTAAGCGAATGAAGAAAGTTAGCAAGACAATCGATCAGCTCTTGGAGAAGATAATTGACGACCATGAACAAGTTGCTAAAACTACGAGTGGGAAACAAGGGAAGCATGAGGACTTTGTAGACGTCTTGCTTTCATTAATGAACCAACCGTTGAACCCGAATGATGAGCAAGTACACTTCCTTGATCGAACAAATGTGAAAGCCATCTTACTAGACATGATAACGCGCGGCGGCTTTTGA

Protein Analysis

330

Amino Acids

36.9

Weight (kDa)

9.37

Isoelectric Point (pI)

44.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 55 - 326 7e-38 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000282)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12350 FvH4_5g12380 FvH4_5g12392 FvH4_5g12400 FvH4_5g12430
malus_domestica MD06G1213300.v1.1 MD06G1213500.v1.1 MD06G1213700.v1.1 MD06G1213800.v1.1 MD06G1213900.v1.1 MD06G1214000.v1.1 MD06G1214400.v1.1 MD14G1224300.v1.1 MD14G1224400.v1.1 MD14G1224600.v1.1 MD14G1224700.v1.1 MD14G1224800.v1.1 MD14G1224900.v1.1 MD14G1225100.v1.1 MD14G1225400.v1.1
prunus_persica Prupe.5G219700_v2.0.a1 Prupe.5G219800_v2.0.a1 Prupe.5G219900_v2.0.a1 Prupe.8G078500_v2.0.a1
pyrus_communis pycom06g19100 pycom14g18590 pycom14g18600 pycom14g18610 pycom14g18660
rosa_chinensis RchiOBHm_Chr0c12g0499591 RchiOBHm_Chr2g0140591 RchiOBHm_Chr2g0140631 RchiOBHm_Chr2g0140641 RchiOBHm_Chr2g0140651 RchiOBHm_Chr4g0417991 RchiOBHm_Chr4g0418001 RchiOBHm_Chr4g0418101 RchiOBHm_Chr4g0418111 RchiOBHm_Chr4g0418121 RchiOBHm_Chr6g0280191 RchiOBHm_Chr6g0280241 RchiOBHm_Chr6g0280251 RchiOBHm_Chr7g0185031 RchiOBHm_Chr7g0185051 RchiOBHm_Chr7g0185081 RchiOBHm_Chr7g0185091 RchiOBHm_Chr7g0185111 RchiOBHm_Chr7g0185131 RchiOBHm_Chr7g0185151 RchiOBHm_Chr7g0185161 RchiOBHm_Chr7g0185191 RchiOBHm_Chr7g0222431
rosa_laevigata RLG00000002061 RLG00000004934 RLG00000004935 RLG00000004937 RLG00000013071 RLG00000013077 RLG00000019621 RLG00000019881 RLG00000019884 RLG00000019887 RLG00000019888 RLG00000028839
rosa_multiflora Rmu_co8014370.1_g000001 Rmu_co8334683.1_g000001 Rmu_co8440383.1_g000001 Rmu_sc0002826.1_g000008 Rmu_sc0002826.1_g000009 Rmu_sc0002826.1_g000030 Rmu_sc0004483.1_g000005 Rmu_sc0004638.1_g000003 Rmu_sc0004638.1_g000004 Rmu_sc0005756.1_g000003 Rmu_sc0006493.1_g000023 Rmu_sc0006493.1_g000024 Rmu_sc0007137.1_g000017 Rmu_sc0008496.1_g000022 Rmu_sc0008769.1_g000003 Rmu_sc0013612.1_g000026 Rmu_sc0013864.1_g000001 Rmu_sc0013864.1_g000007 Rmu_sc0013864.1_g000008 Rmu_sc0030128.1_g000001 Rmu_sc0041660.1_g000001 Rmu_ssc0000289.1_g000001
rosa_roxburghii Rroxscaffold_2G00104640 Rroxscaffold_3G00253970 Rroxscaffold_3G00269170 Rroxscaffold_3G00269200 Rroxscaffold_3G00269210 Rroxscaffold_3G00269220 Rroxscaffold_3G00269230 Rroxscaffold_7G00188320
rosa_rugosa Rorug01G0052300 Rorug05G0212000 Rorug06G0130700 Rorug06G0131100 Rorug06G0466200 Rorug06G0466300 Rorug06G0466400 Rorug06G0466500 Rorug06G0466700 Rorug07G0208500 Rorug07G0294600
rosa_samantha Rh4AG137600 Rh6DG237300 Rh6DG237800 Rh7AG076200 Rh7AG076300 Rh7AG076500 Rh7AG076600 Rh7AG350700 Rh7BG070800 Rh7BG070900 Rh7BG071000 Rh7BG071100
rosa_wichuraiana Rw6G020990 Rw6G021010 Rw7G005900 Rw7G005910 Rw7G005920 Rw7G005940 Rw7G005950 Rw7G005970 Rw7G029600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 879
AccB1I GGYRCC 1 cut(s) 438
AccB7I CCANNNNNTGG 1 cut(s) 241
AccI GTMKAC 1 cut(s) 873
AccII CGCG 3 cut(s) 500, 979, 981
AciI CCGC 4 cut(s) 318, 503, 981, 984
AcoI YGGCCR 1 cut(s) 243
AcuI CTGAAG 1 cut(s) 449
AcyI GRCGYC 2 cut(s) 439, 876
AfaI GTAC 4 cut(s) 386, 460, 617, 927
AfiI CCNNNNNNNGG 4 cut(s) 174, 191, 241, 379
AgsI TTSAA 3 cut(s) 661, 703, 907
AjnI CCWGG 2 cut(s) 96, 240
AluBI AGCT 7 cut(s) 325, 454, 469, 520, 541, 551, 793
AluI AGCT 7 cut(s) 325, 454, 469, 520, 541, 551, 793
Alw26I GTCTC 1 cut(s) 307
AoxI GGCC 4 cut(s) 169, 243, 362, 411
ApeKI GCWGC 3 cut(s) 529, 551, 731
ArsI GACNNNNNNTTYG 2 cut(s) 335, 367
AseI ATTAAT 1 cut(s) 890
AspLEI GCGC 3 cut(s) 441, 502, 981
AspS9I GGNCC 3 cut(s) 170, 363, 428
AsuC2I CCSGG 1 cut(s) 168
AvaII GGWCC 1 cut(s) 428
BalI TGGCCA 1 cut(s) 245
BanI GGYRCC 1 cut(s) 438
BbvI GCAGC 3 cut(s) 516, 538, 718
BccI CCATC 5 cut(s) 98, 231, 278, 616, 965
BceAI ACGGC 1 cut(s) 412
BcgI CGANNNNNNTGC 2 cut(s) 766, 800
BciT130I CCWGG 2 cut(s) 98, 242
BclI TGATCA 1 cut(s) 646
BcnI CCSGG 1 cut(s) 168
BcoDI GTCTC 1 cut(s) 307
BfaI CTAG 3 cut(s) 209, 278, 965
BfmI CTRYAG 1 cut(s) 552
BfoI RGCGCY 1 cut(s) 442
BisI GCNGC 7 cut(s) 318, 503, 530, 552, 732, 982, 985
BlsI GCNGC 7 cut(s) 319, 504, 531, 553, 733, 983, 986
Bme1390I CCNGG 3 cut(s) 98, 168, 242
Bme18I GGWCC 1 cut(s) 428
BmgT120I GGNCC 3 cut(s) 170, 363, 428
BmiI GGNNCC 2 cut(s) 430, 440
BmrFI CCNGG 3 cut(s) 98, 168, 242
BpuEI CTTGAG 1 cut(s) 527
BpuMI CCSGG 1 cut(s) 168
Bsa29I ATCGAT 1 cut(s) 786
BsaAI YACGTR 1 cut(s) 615
BsaHI GRCGYC 2 cut(s) 439, 876
BsaJI CCNNGG 2 cut(s) 173, 378
Bsc4I CCNNNNNNNGG 4 cut(s) 174, 191, 241, 379
Bse118I RCCGGY 1 cut(s) 360
BseBI CCWGG 2 cut(s) 98, 242
BseCI ATCGAT 1 cut(s) 786
BseDI CCNNGG 2 cut(s) 173, 378
BseGI GGATG 6 cut(s) 90, 270, 520, 580, 627, 649
BseLI CCNNNNNNNGG 4 cut(s) 174, 191, 241, 379
BseMII CTCAG 3 cut(s) 41, 497, 524
BseRI GAGGAG 2 cut(s) 95, 295
BseXI GCAGC 3 cut(s) 516, 538, 718
BseYI CCCAGC 2 cut(s) 520, 692
BsgI GTGCAG 1 cut(s) 717
Bsh1236I CGCG 3 cut(s) 500, 979, 981
BshFI GGCC 4 cut(s) 171, 245, 364, 413
BshNI GGYRCC 1 cut(s) 438
BshVI ATCGAT 1 cut(s) 786
BsiSI CCGG 2 cut(s) 168, 361
BslFI GGGAC 1 cut(s) 414
BslI CCNNNNNNNGG 4 cut(s) 174, 191, 241, 379
BsmAI GTCTC 1 cut(s) 307
BsmFI GGGAC 1 cut(s) 414
BsnI GGCC 4 cut(s) 171, 245, 364, 413
Bsp143I GATC 3 cut(s) 646, 787, 937
BspACI CCGC 4 cut(s) 318, 503, 981, 984
BspANI GGCC 4 cut(s) 171, 245, 364, 413
BspCNI CTCAG 3 cut(s) 40, 498, 525
BspDI ATCGAT 1 cut(s) 786
BspFNI CGCG 3 cut(s) 500, 979, 981
BspHI TCATGA 1 cut(s) 340
BspLI GGNNCC 2 cut(s) 430, 440
BspMAI CTGCAG 1 cut(s) 556
BspT107I GGYRCC 1 cut(s) 438
BsrFI RCCGGY 1 cut(s) 360
BssAI RCCGGY 1 cut(s) 360
BssECI CCNNGG 2 cut(s) 173, 378
BssMI GATC 3 cut(s) 646, 787, 937
BssNI GRCGYC 2 cut(s) 439, 876
Bst2UI CCWGG 2 cut(s) 98, 242
Bst4CI ACNGT 1 cut(s) 903
BstACI GRCGYC 2 cut(s) 439, 876
BstBAI YACGTR 1 cut(s) 615
BstC8I GCNNGC 2 cut(s) 358, 362
BstDEI CTNAG 4 cut(s) 27, 506, 533, 756
BstF5I GGATG 6 cut(s) 90, 270, 520, 580, 627, 649
BstFNI CGCG 3 cut(s) 500, 979, 981
BstH2I RGCGCY 1 cut(s) 442
BstHHI GCGC 3 cut(s) 441, 502, 981
BstKTI GATC 3 cut(s) 649, 790, 940
BstMAI GTCTC 1 cut(s) 307
BstMBI GATC 3 cut(s) 646, 787, 937
BstMWI GCNNNNNNNGC 5 cut(s) 237, 405, 460, 526, 538
BstNI CCWGG 2 cut(s) 98, 242
BstNSI RCATGY 2 cut(s) 114, 208
BstSCI CCNGG 3 cut(s) 96, 166, 240
BstSFI CTRYAG 1 cut(s) 552
BstSNI TACGTA 1 cut(s) 615
BstUI CGCG 3 cut(s) 500, 979, 981
BstV1I GCAGC 3 cut(s) 516, 538, 718
BstXI CCANNNNNNTGG 1 cut(s) 97
Bsu15I ATCGAT 1 cut(s) 786
BsuRI GGCC 4 cut(s) 171, 245, 364, 413
BsuTUI ATCGAT 1 cut(s) 786
BtsCI GGATG 6 cut(s) 90, 270, 520, 580, 627, 649
BtsI GCAGTG 2 cut(s) 179, 289
BtsIMutI CAGTG 2 cut(s) 179, 289
Cac8I GCNNGC 2 cut(s) 358, 362
CciI TCATGA 1 cut(s) 340
CfoI GCGC 3 cut(s) 441, 502, 981
Cfr10I RCCGGY 1 cut(s) 360
Cfr13I GGNCC 3 cut(s) 170, 363, 428
ClaI ATCGAT 1 cut(s) 786
Csp6I GTAC 4 cut(s) 385, 459, 616, 926
CviAII CATG 9 cut(s) 111, 205, 265, 341, 409, 443, 818, 860, 970
CviQI GTAC 4 cut(s) 385, 459, 616, 926
DdeI CTNAG 4 cut(s) 27, 506, 533, 756
DinI GGCGCC 1 cut(s) 440
DpnI GATC 3 cut(s) 648, 789, 939
DpnII GATC 3 cut(s) 646, 787, 937
EaeI YGGCCR 1 cut(s) 243
Eco105I TACGTA 1 cut(s) 615
Eco47I GGWCC 1 cut(s) 428
Eco57I CTGAAG 1 cut(s) 449
EcoRII CCWGG 2 cut(s) 96, 240
EgeI GGCGCC 1 cut(s) 440
EheI GGCGCC 1 cut(s) 440
FaeI CATG 9 cut(s) 114, 208, 268, 344, 412, 446, 821, 863, 973
FaqI GGGAC 1 cut(s) 414
FatI CATG 9 cut(s) 110, 204, 264, 340, 408, 442, 817, 859, 969
FbaI TGATCA 1 cut(s) 646
FblI GTMKAC 1 cut(s) 873
Fnu4HI GCNGC 7 cut(s) 318, 503, 530, 552, 732, 982, 985
FokI GGATG 6 cut(s) 77, 257, 527, 587, 634, 656
Fsp4HI GCNGC 7 cut(s) 318, 503, 530, 552, 732, 982, 985
FspBI CTAG 3 cut(s) 209, 278, 965
GlaI GCGC 3 cut(s) 440, 501, 980
GluI GCNGC 7 cut(s) 318, 503, 530, 552, 732, 982, 985
GsaI CCCAGC 2 cut(s) 524, 696
HaeII RGCGCY 1 cut(s) 442
HaeIII GGCC 4 cut(s) 171, 245, 364, 413
HapII CCGG 2 cut(s) 168, 361
HhaI GCGC 3 cut(s) 441, 502, 981
Hin1I GRCGYC 2 cut(s) 439, 876
Hin1II CATG 9 cut(s) 114, 208, 268, 344, 412, 446, 821, 863, 973
Hin6I GCGC 3 cut(s) 439, 500, 979
HinP1I GCGC 3 cut(s) 439, 500, 979
HincII GTYRAC 1 cut(s) 753
HindII GTYRAC 1 cut(s) 753
HinfI GANTC 1 cut(s) 70
HpaII CCGG 2 cut(s) 168, 361
Hpy166II GTNNAC 3 cut(s) 753, 874, 928
Hpy188I TCNGA 5 cut(s) 194, 291, 382, 421, 712
Hpy188III TCNNGA 2 cut(s) 341, 544
Hpy8I GTNNAC 3 cut(s) 753, 874, 928
HpyAV CCTTC 2 cut(s) 554, 732
HpyCH4III ACNGT 1 cut(s) 903
HpyCH4IV ACGT 3 cut(s) 614, 680, 876
HpyCH4V TGCA 2 cut(s) 554, 734
HpyF10VI GCNNNNNNNGC 5 cut(s) 237, 405, 460, 526, 538
HpyF3I CTNAG 4 cut(s) 27, 506, 533, 756
HpySE526I ACGT 3 cut(s) 614, 680, 876
Hsp92I GRCGYC 2 cut(s) 439, 876
Hsp92II CATG 9 cut(s) 114, 208, 268, 344, 412, 446, 821, 863, 973
HspAI GCGC 3 cut(s) 439, 500, 979
KasI GGCGCC 1 cut(s) 438
KroI GCCGGC 1 cut(s) 360
KroNI GCCGGC 1 cut(s) 362
Ksp22I TGATCA 1 cut(s) 646
Kzo9I GATC 3 cut(s) 646, 787, 937
Lsp1109I GCAGC 3 cut(s) 516, 538, 718
MaeI CTAG 3 cut(s) 209, 278, 965
MaeII ACGT 3 cut(s) 614, 680, 876
MaeIII GTNAC 2 cut(s) 120, 177
MalI GATC 3 cut(s) 648, 789, 939
MboI GATC 3 cut(s) 646, 787, 937
MboII GAAGA 2 cut(s) 778, 814
MlsI TGGCCA 1 cut(s) 245
MluCI AATT 2 cut(s) 349, 807
MluNI TGGCCA 1 cut(s) 245
Mly113I GGCGCC 1 cut(s) 439
MlyI GAGTC 1 cut(s) 79
MmeI TCCRAC 2 cut(s) 259, 314
Mox20I TGGCCA 1 cut(s) 245
MroNI GCCGGC 1 cut(s) 360
MscI TGGCCA 1 cut(s) 245
MseI TTAA 1 cut(s) 890
Msp20I TGGCCA 1 cut(s) 245
MspA1I CMGCKG 1 cut(s) 505
MspI CCGG 2 cut(s) 168, 361
MspR9I CCNGG 3 cut(s) 98, 168, 242
MvaI CCWGG 2 cut(s) 98, 242
MvnI CGCG 3 cut(s) 500, 979, 981
MwoI GCNNNNNNNGC 5 cut(s) 237, 405, 460, 526, 538
NaeI GCCGGC 1 cut(s) 362
NarI GGCGCC 1 cut(s) 439
NciI CCSGG 1 cut(s) 168
NdeII GATC 3 cut(s) 646, 787, 937
NgoMIV GCCGGC 1 cut(s) 360
NlaIII CATG 9 cut(s) 114, 208, 268, 344, 412, 446, 821, 863, 973
NlaIV GGNNCC 2 cut(s) 430, 440
NmuCI GTSAC 2 cut(s) 120, 177
NspI RCATGY 2 cut(s) 114, 208
PagI TCATGA 1 cut(s) 340
PdiI GCCGGC 1 cut(s) 362
PflMI CCANNNNNTGG 1 cut(s) 241
PkrI GCNGC 7 cut(s) 319, 504, 531, 553, 733, 983, 986
PleI GAGTC 1 cut(s) 78
PluTI GGCGCC 1 cut(s) 442
PpsI GAGTC 1 cut(s) 78
Ppu21I YACGTR 1 cut(s) 615
PshBI ATTAAT 1 cut(s) 890
Psp6I CCWGG 2 cut(s) 96, 240
PspFI CCCAGC 2 cut(s) 520, 692
PspGI CCWGG 2 cut(s) 96, 240
PspN4I GGNNCC 2 cut(s) 430, 440
PspPI GGNCC 3 cut(s) 170, 363, 428
PstI CTGCAG 1 cut(s) 556
RsaI GTAC 4 cut(s) 386, 460, 617, 927
RsaNI GTAC 4 cut(s) 385, 459, 616, 926
SaqAI TTAA 1 cut(s) 890
SatI GCNGC 7 cut(s) 318, 503, 530, 552, 732, 982, 985
Sau3AI GATC 3 cut(s) 646, 787, 937
Sau96I GGNCC 3 cut(s) 170, 363, 428
SchI GAGTC 1 cut(s) 79
ScrFI CCNGG 3 cut(s) 98, 168, 242
SfcI CTRYAG 1 cut(s) 552
SfoI GGCGCC 1 cut(s) 440
SinI GGWCC 1 cut(s) 428
SmlI CTYRAG 1 cut(s) 542
SmoI CTYRAG 1 cut(s) 542
SnaBI TACGTA 1 cut(s) 615
Sse9I AATT 2 cut(s) 349, 807
SsiI CCGC 4 cut(s) 318, 503, 981, 984
SspDI GGCGCC 1 cut(s) 438
SspMI CTAG 3 cut(s) 209, 278, 965
StyD4I CCNGG 3 cut(s) 96, 166, 240
TaaI ACNGT 1 cut(s) 903
TaiI ACGT 3 cut(s) 617, 683, 879
TaqI TCGA 3 cut(s) 226, 786, 940
TaqII GACCGA 1 cut(s) 165
TasI AATT 2 cut(s) 349, 807
TatI WGTACW 2 cut(s) 384, 925
TauI GCSGC 4 cut(s) 320, 505, 984, 987
Tru1I TTAA 1 cut(s) 890
Tru9I TTAA 1 cut(s) 890
TscAI CASTG 2 cut(s) 186, 289
TseFI GTSAC 2 cut(s) 120, 177
TseI GCWGC 3 cut(s) 529, 551, 731
Tsp45I GTSAC 2 cut(s) 120, 177
TspDTI ATGAA 5 cut(s) 614, 779, 834, 876, 908
TspGWI ACGGA 1 cut(s) 263
TspRI CASTG 2 cut(s) 186, 289
Van91I CCANNNNNTGG 1 cut(s) 241
VpaK11BI GGWCC 1 cut(s) 428
VspI ATTAAT 1 cut(s) 890
XceI RCATGY 2 cut(s) 114, 208
XmiI GTMKAC 1 cut(s) 873
XspI CTAG 3 cut(s) 209, 278, 965
ZraI GACGTC 1 cut(s) 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.