Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0014745

Physical Location & Seq

Genomic Coordinates Forward (+)

17710532 .. 17711623

Gene Structure 1092 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G232800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 624 bp

ATGGCCTGCCCATCATCAACAATATGCAGGACAACAACTGACTCTGCTTCCAAAATTTCATGCTTCTACAGCAACACCTCCTTGCTCCTCTTCTCCTCCACCATATCCAGCAAACGCCAGCGTTTCATCACTTGTTCATTAGACCCCATCTCAACTTCATCAACAACTTCTTCTTCTTCTTCTGGCTGTTCTTGGTCTTCAACATCTCAGAAAGGTAACATAACAAACAAAAAATCTCTTGAAATACAAAGAACCAAGGATGGGACTTTCTCAGTTGTACATAATGATGATCGCAAACCATCTGATCAAAAGAAGATCAAGAAAAGCAACAAGGACGAGACTAAGAAATCCGGTCCAAGAAAGCGACGACCTTTGTGGCAAAAGGTTTTCTTTGCATCCAAGAAGATGAGGAGTATTATCTTGCTCAATTTCATCACAATTGTCTATGCAAGTGACATTCCAGTTATCAAAGAAGTTGAAGCTATTATGGACCCGGCGGCCTTCTCAGCAGTGCGATTTGTCATGTCAGCCATCCCATTTCTGCCATTTGTGTTCCAATCACGAGATGATGTCCAGACCCGCAATGCAGGGATGGAGTTGGGGTTCTGGATCAGTCTAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

208

Amino Acids

23.04

Weight (kDa)

9.91

Isoelectric Point (pI)

53.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014745)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g17290 FvH4_5g17290 FvH4_5g17290
malus_domestica	MD06G1226600.v1.1
prunus_persica	Prupe.5G232800_v2.0.a1 Prupe.5G232900_v2.0.a1
pyrus_communis	pycom06g20290
rosa_chinensis	RchiOBHm_Chr7g0178481
rosa_laevigata	RLG00000005443
rosa_multiflora	Rmu_sc0010235.1_g000003
rosa_roxburghii	Rroxscaffold_3G00274860
rosa_rugosa	Rorug06G0417500
rosa_samantha	Rh7AG016000 Rh7BG015600 Rh7CG016300 Rh7DG016000
rosa_wichuraiana	Rw7G001260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	497, 580
AclWI	GGATC	1 cut(s)	617
AcsI	RAATTY	1 cut(s)	54
AfaI	GTAC	1 cut(s)	279
AfiI	CCNNNNNNNGG	1 cut(s)	261
AgsI	TTSAA	3 cut(s)	201, 242, 479
AloI	GAACNNNNNNTCC	2 cut(s)	587, 619
AluBI	AGCT	1 cut(s)	482
AluI	AGCT	1 cut(s)	482
Alw26I	GTCTC	1 cut(s)	332
AlwI	GGATC	1 cut(s)	617
AoxI	GGCC	2 cut(s)	3, 498
ApoI	RAATTY	1 cut(s)	54
AspS9I	GGNCC	2 cut(s)	353, 490
AsuC2I	CCSGG	1 cut(s)	494
AvaII	GGWCC	2 cut(s)	353, 490
BauI	CACGAG	1 cut(s)	561
BbsI	GAAGAC	1 cut(s)	189
BccI	CCATC	6 cut(s)	19, 155, 254, 307, 539, 586
BclI	TGATCA	1 cut(s)	304
BcnI	CCSGG	1 cut(s)	494
BcoDI	GTCTC	1 cut(s)	332
BfaI	CTAG	1 cut(s)	617
BfmI	CTRYAG	1 cut(s)	67
BisI	GCNGC	1 cut(s)	498
BlsI	GCNGC	1 cut(s)	499
Bme1390I	CCNGG	1 cut(s)	494
Bme18I	GGWCC	2 cut(s)	353, 490
BmgT120I	GGNCC	2 cut(s)	353, 490
BmiI	GGNNCC	1 cut(s)	492
BmrFI	CCNGG	1 cut(s)	494
BmsI	GCATC	1 cut(s)	404
BpiI	GAAGAC	1 cut(s)	189
BpuMI	CCSGG	1 cut(s)	494
BsaJI	CCNNGG	1 cut(s)	255
BsaWI	WCCGGW	1 cut(s)	350
BsaXI	ACNNNNNCTCC	2 cut(s)	587, 617
Bsc4I	CCNNNNNNNGG	1 cut(s)	261
Bse1I	ACTGG	1 cut(s)	461
Bse3DI	GCAATG	1 cut(s)	589
BseDI	CCNNGG	1 cut(s)	255
BseGI	GGATG	4 cut(s)	265, 395, 531, 597
BseLI	CCNNNNNNNGG	1 cut(s)	261
BseMI	GCAATG	1 cut(s)	589
BseMII	CTCAG	3 cut(s)	221, 285, 519
BseNI	ACTGG	1 cut(s)	461
BseRI	GAGGAG	3 cut(s)	77, 85, 424
BshFI	GGCC	2 cut(s)	5, 500
BsiSI	CCGG	2 cut(s)	351, 494
BslFI	GGGAC	1 cut(s)	277
BslI	CCNNNNNNNGG	1 cut(s)	261
BsmAI	GTCTC	1 cut(s)	332
BsmFI	GGGAC	1 cut(s)	277
BsnI	GGCC	2 cut(s)	5, 500
Bsp1407I	TGTACA	1 cut(s)	277
Bsp143I	GATC	4 cut(s)	289, 304, 315, 609
BspACI	CCGC	2 cut(s)	497, 580
BspANI	GGCC	2 cut(s)	5, 500
BspCNI	CTCAG	3 cut(s)	220, 284, 518
BspLI	GGNNCC	1 cut(s)	492
BspPI	GGATC	1 cut(s)	617
BsrDI	GCAATG	1 cut(s)	589
BsrGI	TGTACA	1 cut(s)	277
BsrI	ACTGG	1 cut(s)	461
BssECI	CCNNGG	1 cut(s)	255
BssMI	GATC	4 cut(s)	289, 304, 315, 609
BssSI	CACGAG	1 cut(s)	561
BssT1I	CCWWGG	1 cut(s)	255
Bst2BI	CACGAG	1 cut(s)	561
Bst6I	CTCTTC	1 cut(s)	95
BstAUI	TGTACA	1 cut(s)	277
BstC8I	GCNNGC	2 cut(s)	7, 119
BstDEI	CTNAG	4 cut(s)	207, 271, 342, 505
BstF5I	GGATG	4 cut(s)	265, 395, 531, 597
BstKTI	GATC	4 cut(s)	292, 307, 318, 612
BstMAI	GTCTC	1 cut(s)	332
BstMBI	GATC	4 cut(s)	289, 304, 315, 609
BstMWI	GCNNNNNNNGC	2 cut(s)	69, 506
BstSCI	CCNGG	1 cut(s)	492
BstSFI	CTRYAG	1 cut(s)	67
BstV2I	GAAGAC	1 cut(s)	189
BsuRI	GGCC	2 cut(s)	5, 500
BtsCI	GGATG	4 cut(s)	265, 395, 531, 597
BtsI	GCAGTG	1 cut(s)	516
BtsIMutI	CAGTG	1 cut(s)	516
Cac8I	GCNNGC	2 cut(s)	7, 119
Cfr13I	GGNCC	2 cut(s)	353, 490
Csp6I	GTAC	1 cut(s)	278
CviAII	CATG	2 cut(s)	60, 523
CviJI	RGCY	5 cut(s)	5, 186, 482, 500, 530
CviKI_1	RGCY	5 cut(s)	5, 186, 482, 500, 530
CviQI	GTAC	1 cut(s)	278
DdeI	CTNAG	4 cut(s)	207, 271, 342, 505
DpnI	GATC	4 cut(s)	291, 306, 317, 611
DpnII	GATC	4 cut(s)	289, 304, 315, 609
Eam1104I	CTCTTC	1 cut(s)	95
EarI	CTCTTC	1 cut(s)	95
Eco130I	CCWWGG	1 cut(s)	255
Eco47I	GGWCC	2 cut(s)	353, 490
EcoT14I	CCWWGG	1 cut(s)	255
ErhI	CCWWGG	1 cut(s)	255
FaeI	CATG	2 cut(s)	63, 526
FaiI	YATR	8 cut(s)	25, 61, 104, 221, 282, 447, 488, 524
FalI	AAGNNNNNCTT	2 cut(s)	374, 406
FaqI	GGGAC	1 cut(s)	277
FatI	CATG	2 cut(s)	59, 522
FauI	CCCGC	1 cut(s)	587
FbaI	TGATCA	1 cut(s)	304
Fnu4HI	GCNGC	1 cut(s)	498
FokI	GGATG	4 cut(s)	272, 382, 518, 604
Fsp4HI	GCNGC	1 cut(s)	498
FspBI	CTAG	1 cut(s)	617
GluI	GCNGC	1 cut(s)	498
HaeIII	GGCC	2 cut(s)	5, 500
HapII	CCGG	2 cut(s)	351, 494
Hin1II	CATG	2 cut(s)	63, 526
HinfI	GANTC	1 cut(s)	41
HpaII	CCGG	2 cut(s)	351, 494
Hpy188I	TCNGA	2 cut(s)	210, 304
Hpy188III	TCNNGA	5 cut(s)	239, 319, 561, 574, 607
Hpy99I	CGWCG	1 cut(s)	369
HpyAV	CCTTC	1 cut(s)	511
HpyCH4V	TGCA	4 cut(s)	27, 395, 449, 587
HpyF10VI	GCNNNNNNNGC	2 cut(s)	69, 506
HpyF3I	CTNAG	4 cut(s)	207, 271, 342, 505
Hsp92II	CATG	2 cut(s)	63, 526
Ksp22I	TGATCA	1 cut(s)	304
Kzo9I	GATC	4 cut(s)	289, 304, 315, 609
LmnI	GCTCC	1 cut(s)	90
LweI	GCATC	1 cut(s)	404
MaeI	CTAG	1 cut(s)	617
MaeIII	GTNAC	2 cut(s)	215, 452
MalI	GATC	4 cut(s)	291, 306, 317, 611
MboI	GATC	4 cut(s)	289, 304, 315, 609
MboII	GAAGA	8 cut(s)	82, 162, 165, 168, 171, 189, 325, 415
MfeI	CAATTG	1 cut(s)	438
MluCI	AATT	3 cut(s)	54, 427, 438
MlyI	GAGTC	1 cut(s)	35
MnlI	CCTC	4 cut(s)	88, 98, 106, 402
MslI	CAYNNNNRTG	1 cut(s)	285
MspI	CCGG	2 cut(s)	351, 494
MspR9I	CCNGG	1 cut(s)	494
MunI	CAATTG	1 cut(s)	438
MwoI	GCNNNNNNNGC	2 cut(s)	69, 506
NciI	CCSGG	1 cut(s)	494
NdeII	GATC	4 cut(s)	289, 304, 315, 609
NlaIII	CATG	2 cut(s)	63, 526
NlaIV	GGNNCC	1 cut(s)	492
NmuCI	GTSAC	1 cut(s)	452
PkrI	GCNGC	1 cut(s)	499
PleI	GAGTC	1 cut(s)	35
PpsI	GAGTC	1 cut(s)	35
PspN4I	GGNNCC	1 cut(s)	492
PspPI	GGNCC	2 cut(s)	353, 490
RsaI	GTAC	1 cut(s)	279
RsaNI	GTAC	1 cut(s)	278
RseI	CAYNNNNRTG	1 cut(s)	285
SatI	GCNGC	1 cut(s)	498
Sau3AI	GATC	4 cut(s)	289, 304, 315, 609
Sau96I	GGNCC	2 cut(s)	353, 490
SchI	GAGTC	1 cut(s)	35
ScrFI	CCNGG	1 cut(s)	494
SetI	ASST	5 cut(s)	80, 217, 373, 387, 484
SfaNI	GCATC	1 cut(s)	404
SfcI	CTRYAG	1 cut(s)	67
SinI	GGWCC	2 cut(s)	353, 490
SmiMI	CAYNNNNRTG	1 cut(s)	285
Sse9I	AATT	3 cut(s)	54, 427, 438
SsiI	CCGC	2 cut(s)	497, 580
SspMI	CTAG	1 cut(s)	617
StyD4I	CCNGG	1 cut(s)	492
StyI	CCWWGG	1 cut(s)	255
TasI	AATT	3 cut(s)	54, 427, 438
TatI	WGTACW	1 cut(s)	277
TauI	GCSGC	1 cut(s)	500
TscAI	CASTG	1 cut(s)	516
TseFI	GTSAC	1 cut(s)	452
Tsp45I	GTSAC	1 cut(s)	452
TspDTI	ATGAA	5 cut(s)	48, 115, 126, 147, 421
TspRI	CASTG	1 cut(s)	516
VpaK11BI	GGWCC	2 cut(s)	353, 490
XapI	RAATTY	1 cut(s)	54
XspI	CTAG	1 cut(s)	617

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.