heat shock
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G56000 AT5G56010 AT5G56030 AT5G56030 |
| fragaria_vesca | FvH4_3g42240 FvH4_3g42240 FvH4_3g42240 FvH4_3g42240 FvH4_3g42240 |
| malus_domestica | MD03G1036600.v1.1 MD09G1000500.v1.1 MD11G1037400.v1.1 |
| prunus_persica | Prupe.6G028600_v2.0.a1 |
| pyrus_communis | pycom03g02800 pycom11g03100 |
| rosa_chinensis | RchiOBHm_Chr5g0075541 |
| rosa_laevigata | RLG00000036574 |
| rosa_multiflora | Rmu_sc0003437.1_g000003 Rmu_sc0024773.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00006010 |
| rosa_rugosa | Rorug05G0440100 Rorug05G0440200 |
| rosa_samantha | Rh5AG497500 Rh5BG518400 Rh5CG542000 Rh5DG530700 |
| rosa_wichuraiana | Rw5G046120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1688 |
| Acc65I | GGTACC | 1 cut(s) | 284 |
| AccB1I | GGYRCC | 2 cut(s) | 284, 302 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 870 |
| AccBSI | CCGCTC | 1 cut(s) | 1323 |
| AccI | GTMKAC | 1 cut(s) | 1692 |
| AciI | CCGC | 6 cut(s) | 5, 330, 458, 568, 1009, 1323 |
| AclWI | GGATC | 5 cut(s) | 745, 1039, 1098, 1969, 1982 |
| AcoI | YGGCCR | 1 cut(s) | 327 |
| AcsI | RAATTY | 1 cut(s) | 311 |
| AcuI | CTGAAG | 1 cut(s) | 1466 |
| AfaI | GTAC | 5 cut(s) | 286, 514, 554, 1496, 1793 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 294, 538, 574, 870, 1474, 1840, 2050 |
| AflIII | ACRYGT | 1 cut(s) | 1794 |
| AgeI | ACCGGT | 1 cut(s) | 1397 |
| AgsI | TTSAA | 6 cut(s) | 560, 925, 1110, 1141, 1606, 1990 |
| AjnI | CCWGG | 2 cut(s) | 27, 753 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1631, 1663 |
| AleI | CACNNNNGTG | 1 cut(s) | 769 |
| Alw21I | GWGCWC | 1 cut(s) | 105 |
| Alw26I | GTCTC | 8 cut(s) | 2, 8, 456, 477, 1346, 1543, 1562, 1910 |
| AlwI | GGATC | 5 cut(s) | 745, 1039, 1098, 1969, 1982 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 49 |
| AoxI | GGCC | 5 cut(s) | 30, 327, 927, 1372, 1764 |
| ApeKI | GCWGC | 2 cut(s) | 1123, 2076 |
| ApoI | RAATTY | 1 cut(s) | 311 |
| AsiGI | ACCGGT | 1 cut(s) | 1397 |
| Asp718I | GGTACC | 1 cut(s) | 284 |
| AspLEI | GCGC | 1 cut(s) | 567 |
| AspS9I | GGNCC | 4 cut(s) | 541, 1372, 1465, 1894 |
| AvaII | GGWCC | 3 cut(s) | 541, 1465, 1894 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 268, 301 |
| BamHI | GGATCC | 1 cut(s) | 1974 |
| BanI | GGYRCC | 2 cut(s) | 284, 302 |
| BanII | GRGCYC | 2 cut(s) | 105, 955 |
| BbsI | GAAGAC | 5 cut(s) | 641, 1009, 1215, 1584, 1814 |
| Bbv12I | GWGCWC | 1 cut(s) | 105 |
| BbvCI | CCTCAGC | 1 cut(s) | 2070 |
| BbvI | GCAGC | 2 cut(s) | 1135, 2088 |
| BccI | CCATC | 4 cut(s) | 167, 938, 1844, 2077 |
| BceAI | ACGGC | 1 cut(s) | 996 |
| BciT130I | CCWGG | 2 cut(s) | 29, 755 |
| BclI | TGATCA | 1 cut(s) | 57 |
| BcoDI | GTCTC | 8 cut(s) | 2, 8, 456, 477, 1346, 1543, 1562, 1910 |
| BfmI | CTRYAG | 1 cut(s) | 73 |
| BfoI | RGCGCY | 1 cut(s) | 568 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 29 |
| BglII | AGATCT | 2 cut(s) | 87, 1134 |
| BisI | GCNGC | 4 cut(s) | 330, 568, 1124, 2077 |
| BlsI | GCNGC | 4 cut(s) | 331, 569, 1125, 2078 |
| Bme1390I | CCNGG | 2 cut(s) | 29, 755 |
| Bme18I | GGWCC | 3 cut(s) | 541, 1465, 1894 |
| BmgT120I | GGNCC | 4 cut(s) | 541, 1372, 1465, 1894 |
| BmiI | GGNNCC | 4 cut(s) | 286, 304, 954, 1976 |
| BmrFI | CCNGG | 2 cut(s) | 29, 755 |
| BmrI | ACTGGG | 1 cut(s) | 880 |
| BmsI | GCATC | 9 cut(s) | 112, 889, 1471, 1855, 2005, 2020, 2028, 2050, 2056 |
| BmuI | ACTGGG | 1 cut(s) | 880 |
| BpiI | GAAGAC | 5 cut(s) | 641, 1009, 1215, 1584, 1814 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1220, 1252 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1761, 2070 |
| BsaI | GGTCTC | 1 cut(s) | 1562 |
| BsaJI | CCNNGG | 5 cut(s) | 280, 306, 1057, 1548, 1812 |
| BsaWI | WCCGGW | 1 cut(s) | 1397 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 294, 538, 574, 870, 1474, 1840, 2050 |
| Bse118I | RCCGGY | 1 cut(s) | 1397 |
| Bse1I | ACTGG | 2 cut(s) | 875, 1338 |
| Bse3DI | GCAATG | 1 cut(s) | 288 |
| BseBI | CCWGG | 2 cut(s) | 29, 755 |
| BseDI | CCNNGG | 5 cut(s) | 280, 306, 1057, 1548, 1812 |
| BseGI | GGATG | 8 cut(s) | 201, 258, 712, 810, 930, 1146, 1368, 1648 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 294, 538, 574, 870, 1474, 1840, 2050 |
| BseMI | GCAATG | 1 cut(s) | 288 |
| BseNI | ACTGG | 2 cut(s) | 875, 1338 |
| BseRI | GAGGAG | 6 cut(s) | 746, 833, 890, 1052, 1859, 1916 |
| BseXI | GCAGC | 2 cut(s) | 1135, 2088 |
| BseYI | CCCAGC | 1 cut(s) | 1787 |
| BshFI | GGCC | 5 cut(s) | 32, 329, 929, 1374, 1766 |
| BshNI | GGYRCC | 2 cut(s) | 284, 302 |
| BshTI | ACCGGT | 1 cut(s) | 1397 |
| BsiHKAI | GWGCWC | 1 cut(s) | 105 |
| BsiSI | CCGG | 1 cut(s) | 1398 |
| BslFI | GGGAC | 1 cut(s) | 1635 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 294, 538, 574, 870, 1474, 1840, 2050 |
| BsmAI | GTCTC | 8 cut(s) | 2, 8, 456, 477, 1346, 1543, 1562, 1910 |
| BsmBI | CGTCTC | 1 cut(s) | 8 |
| BsmFI | GGGAC | 1 cut(s) | 1635 |
| BsnI | GGCC | 5 cut(s) | 32, 329, 929, 1374, 1766 |
| Bso31I | GGTCTC | 1 cut(s) | 1562 |
| Bsp1286I | GDGCHC | 2 cut(s) | 105, 955 |
| Bsp19I | CCATGG | 1 cut(s) | 1812 |
| BspACI | CCGC | 6 cut(s) | 5, 330, 458, 568, 1009, 1323 |
| BspANI | GGCC | 5 cut(s) | 32, 329, 929, 1374, 1766 |
| BspHI | TCATGA | 1 cut(s) | 1752 |
| BspLI | GGNNCC | 4 cut(s) | 286, 304, 954, 1976 |
| BspPI | GGATC | 5 cut(s) | 745, 1039, 1098, 1969, 1982 |
| BspQI | GCTCTTC | 1 cut(s) | 555 |
| BspT107I | GGYRCC | 2 cut(s) | 284, 302 |
| BspTNI | GGTCTC | 1 cut(s) | 1562 |
| BsrBI | CCGCTC | 1 cut(s) | 1323 |
| BsrDI | GCAATG | 1 cut(s) | 288 |
| BsrFI | RCCGGY | 1 cut(s) | 1397 |
| BsrI | ACTGG | 2 cut(s) | 875, 1338 |
| BssAI | RCCGGY | 1 cut(s) | 1397 |
| BssECI | CCNNGG | 5 cut(s) | 280, 306, 1057, 1548, 1812 |
| BssT1I | CCWWGG | 4 cut(s) | 306, 1057, 1548, 1812 |
| Bst2UI | CCWGG | 2 cut(s) | 29, 755 |
| Bst4CI | ACNGT | 5 cut(s) | 242, 475, 1034, 1685, 2027 |
| Bst6I | CTCTTC | 8 cut(s) | 531, 555, 681, 711, 828, 1323, 1475, 1593 |
| BstC8I | GCNNGC | 2 cut(s) | 167, 1290 |
| BstDSI | CCRYGG | 1 cut(s) | 1812 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 536 |
| BstF5I | GGATG | 8 cut(s) | 201, 258, 712, 810, 930, 1146, 1368, 1648 |
| BstH2I | RGCGCY | 1 cut(s) | 568 |
| BstHHI | GCGC | 1 cut(s) | 567 |
| BstMAI | GTCTC | 8 cut(s) | 2, 8, 456, 477, 1346, 1543, 1562, 1910 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 29, 122, 329, 335, 1725 |
| BstNI | CCWGG | 2 cut(s) | 29, 755 |
| BstNSI | RCATGY | 1 cut(s) | 1798 |
| BstSCI | CCNGG | 2 cut(s) | 27, 753 |
| BstSFI | CTRYAG | 1 cut(s) | 73 |
| BstV1I | GCAGC | 2 cut(s) | 1135, 2088 |
| BstV2I | GAAGAC | 5 cut(s) | 641, 1009, 1215, 1584, 1814 |
| BstX2I | RGATCY | 5 cut(s) | 87, 750, 1090, 1134, 1974 |
| BstYI | RGATCY | 5 cut(s) | 87, 750, 1090, 1134, 1974 |
| BsuRI | GGCC | 5 cut(s) | 32, 329, 929, 1374, 1766 |
| BtgI | CCRYGG | 1 cut(s) | 1812 |
| BtsCI | GGATG | 8 cut(s) | 201, 258, 712, 810, 930, 1146, 1368, 1648 |
| BtsIMutI | CAGTG | 3 cut(s) | 247, 639, 1893 |
| Cac8I | GCNNGC | 2 cut(s) | 167, 1290 |
| CaiI | CAGNNNCTG | 1 cut(s) | 49 |
| CciI | TCATGA | 1 cut(s) | 1752 |
| CfoI | GCGC | 1 cut(s) | 567 |
| Cfr10I | RCCGGY | 1 cut(s) | 1397 |
| Cfr13I | GGNCC | 4 cut(s) | 541, 1372, 1465, 1894 |
| CseI | GACGC | 1 cut(s) | 2063 |
| Csp6I | GTAC | 5 cut(s) | 285, 513, 553, 1495, 1792 |
| CspAI | ACCGGT | 1 cut(s) | 1397 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 425, 460 |
| CviQI | GTAC | 5 cut(s) | 285, 513, 553, 1495, 1792 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1688 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1688 |
| EaeI | YGGCCR | 1 cut(s) | 327 |
| Eam1104I | CTCTTC | 8 cut(s) | 531, 555, 681, 711, 828, 1323, 1475, 1593 |
| EarI | CTCTTC | 8 cut(s) | 531, 555, 681, 711, 828, 1323, 1475, 1593 |
| EciI | GGCGGA | 2 cut(s) | 20, 998 |
| Ecl136II | GAGCTC | 1 cut(s) | 103 |
| Eco130I | CCWWGG | 4 cut(s) | 306, 1057, 1548, 1812 |
| Eco147I | AGGCCT | 1 cut(s) | 1766 |
| Eco24I | GRGCYC | 2 cut(s) | 105, 955 |
| Eco31I | GGTCTC | 1 cut(s) | 1562 |
| Eco32I | GATATC | 1 cut(s) | 1307 |
| Eco47I | GGWCC | 3 cut(s) | 541, 1465, 1894 |
| Eco53kI | GAGCTC | 1 cut(s) | 103 |
| Eco57I | CTGAAG | 1 cut(s) | 1466 |
| EcoICRI | GAGCTC | 1 cut(s) | 103 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 536 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1465, 1894 |
| EcoRII | CCWGG | 2 cut(s) | 27, 753 |
| EcoRV | GATATC | 1 cut(s) | 1307 |
| EcoT14I | CCWWGG | 4 cut(s) | 306, 1057, 1548, 1812 |
| EcoT38I | GRGCYC | 2 cut(s) | 105, 955 |
| ErhI | CCWWGG | 4 cut(s) | 306, 1057, 1548, 1812 |
| Esp3I | CGTCTC | 1 cut(s) | 8 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 74, 106 |
| FaqI | GGGAC | 1 cut(s) | 1635 |
| FauI | CCCGC | 1 cut(s) | 451 |
| FbaI | TGATCA | 1 cut(s) | 57 |
| FblI | GTMKAC | 1 cut(s) | 1692 |
| Fnu4HI | GCNGC | 4 cut(s) | 330, 568, 1124, 2077 |
| FokI | GGATG | 8 cut(s) | 188, 265, 719, 817, 917, 1133, 1375, 1655 |
| FriOI | GRGCYC | 2 cut(s) | 105, 955 |
| Fsp4HI | GCNGC | 4 cut(s) | 330, 568, 1124, 2077 |
| GlaI | GCGC | 1 cut(s) | 566 |
| GluI | GCNGC | 4 cut(s) | 330, 568, 1124, 2077 |
| GsaI | CCCAGC | 1 cut(s) | 1791 |
| HaeII | RGCGCY | 1 cut(s) | 568 |
| HaeIII | GGCC | 5 cut(s) | 32, 329, 929, 1374, 1766 |
| HapII | CCGG | 1 cut(s) | 1398 |
| HgaI | GACGC | 1 cut(s) | 2063 |
| HhaI | GCGC | 1 cut(s) | 567 |
| Hin6I | GCGC | 1 cut(s) | 565 |
| HinP1I | GCGC | 1 cut(s) | 565 |
| HincII | GTYRAC | 2 cut(s) | 1693, 2023 |
| HindII | GTYRAC | 2 cut(s) | 1693, 2023 |
| HindIII | AAGCTT | 6 cut(s) | 321, 1250, 1286, 1532, 1562, 1991 |
| HinfI | GANTC | 9 cut(s) | 449, 856, 1082, 1229, 1257, 1268, 1623, 1694, 1749 |
| HpaII | CCGG | 1 cut(s) | 1398 |
| Hpy166II | GTNNAC | 5 cut(s) | 274, 784, 1081, 1693, 2023 |
| Hpy188I | TCNGA | 7 cut(s) | 51, 121, 598, 658, 1087, 1304, 1681 |
| Hpy188III | TCNNGA | 7 cut(s) | 128, 625, 802, 1110, 1138, 1753, 1915 |
| Hpy8I | GTNNAC | 5 cut(s) | 274, 784, 1081, 1693, 2023 |
| Hpy99I | CGWCG | 1 cut(s) | 2015 |
| HpyCH4III | ACNGT | 5 cut(s) | 242, 475, 1034, 1685, 2027 |
| HpyCH4IV | ACGT | 1 cut(s) | 17 |
| HpyCH4V | TGCA | 6 cut(s) | 293, 395, 1123, 1173, 1629, 1868 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 29, 122, 329, 335, 1725 |
| HpySE526I | ACGT | 1 cut(s) | 17 |
| HspAI | GCGC | 1 cut(s) | 565 |
| KpnI | GGTACC | 1 cut(s) | 288 |
| Ksp22I | TGATCA | 1 cut(s) | 57 |
| LguI | GCTCTTC | 1 cut(s) | 555 |
| LmnI | GCTCC | 4 cut(s) | 877, 958, 1039, 1846 |
| Lsp1109I | GCAGC | 2 cut(s) | 1135, 2088 |
| LweI | GCATC | 9 cut(s) | 112, 889, 1471, 1855, 2005, 2020, 2028, 2050, 2056 |
| MaeII | ACGT | 1 cut(s) | 17 |
| MaeIII | GTNAC | 7 cut(s) | 110, 409, 475, 762, 1354, 1652, 1711 |
| MbiI | CCGCTC | 1 cut(s) | 1323 |
| MflI | RGATCY | 5 cut(s) | 87, 750, 1090, 1134, 1974 |
| MhlI | GDGCHC | 2 cut(s) | 105, 955 |
| MluCI | AATT | 1 cut(s) | 311 |
| MlyI | GAGTC | 7 cut(s) | 458, 865, 1076, 1238, 1262, 1617, 1688 |
| MseI | TTAA | 4 cut(s) | 585, 1068, 1101, 2098 |
| MslI | CAYNNNNRTG | 3 cut(s) | 426, 769, 1178 |
| MspA1I | CMGCKG | 1 cut(s) | 332 |
| MspI | CCGG | 1 cut(s) | 1398 |
| MspR9I | CCNGG | 2 cut(s) | 29, 755 |
| MvaI | CCWGG | 2 cut(s) | 29, 755 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 29, 122, 329, 335, 1725 |
| NcoI | CCATGG | 1 cut(s) | 1812 |
| NlaIV | GGNNCC | 4 cut(s) | 286, 304, 954, 1976 |
| NmeAIII | GCCGAG | 2 cut(s) | 58, 483 |
| NmuCI | GTSAC | 5 cut(s) | 475, 762, 1354, 1652, 1711 |
| NspI | RCATGY | 1 cut(s) | 1798 |
| OliI | CACNNNNGTG | 1 cut(s) | 769 |
| PagI | TCATGA | 1 cut(s) | 1752 |
| PceI | AGGCCT | 1 cut(s) | 1766 |
| PciI | ACATGT | 1 cut(s) | 1794 |
| PciSI | GCTCTTC | 1 cut(s) | 555 |
| PfeI | GAWTC | 2 cut(s) | 1257, 1749 |
| PflFI | GACNNNGTC | 1 cut(s) | 401 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 870 |
| PfoI | TCCNGGA | 1 cut(s) | 753 |
| PinAI | ACCGGT | 1 cut(s) | 1397 |
| PkrI | GCNGC | 4 cut(s) | 331, 569, 1125, 2078 |
| PleI | GAGTC | 7 cut(s) | 457, 864, 1076, 1237, 1262, 1617, 1688 |
| PpsI | GAGTC | 7 cut(s) | 457, 864, 1076, 1237, 1262, 1617, 1688 |
| PpuMI | RGGWCCY | 2 cut(s) | 1465, 1894 |
| PscI | ACATGT | 1 cut(s) | 1794 |
| Psp124BI | GAGCTC | 1 cut(s) | 105 |
| Psp5II | RGGWCCY | 2 cut(s) | 1465, 1894 |
| Psp6I | CCWGG | 2 cut(s) | 27, 753 |
| PspFI | CCCAGC | 1 cut(s) | 1787 |
| PspGI | CCWGG | 2 cut(s) | 27, 753 |
| PspN4I | GGNNCC | 4 cut(s) | 286, 304, 954, 1976 |
| PspPI | GGNCC | 4 cut(s) | 541, 1372, 1465, 1894 |
| PspPPI | RGGWCCY | 2 cut(s) | 1465, 1894 |
| PstNI | CAGNNNCTG | 1 cut(s) | 49 |
| PsuI | RGATCY | 5 cut(s) | 87, 750, 1090, 1134, 1974 |
| PsyI | GACNNNGTC | 1 cut(s) | 401 |
| RsaI | GTAC | 5 cut(s) | 286, 514, 554, 1496, 1793 |
| RsaNI | GTAC | 5 cut(s) | 285, 513, 553, 1495, 1792 |
| RseI | CAYNNNNRTG | 3 cut(s) | 426, 769, 1178 |
| SacI | GAGCTC | 1 cut(s) | 105 |
| SalI | GTCGAC | 1 cut(s) | 1691 |
| SapI | GCTCTTC | 1 cut(s) | 555 |
| SaqAI | TTAA | 4 cut(s) | 585, 1068, 1101, 2098 |
| SatI | GCNGC | 4 cut(s) | 330, 568, 1124, 2077 |
| Sau96I | GGNCC | 4 cut(s) | 541, 1372, 1465, 1894 |
| SchI | GAGTC | 7 cut(s) | 458, 865, 1076, 1238, 1262, 1617, 1688 |
| ScrFI | CCNGG | 2 cut(s) | 29, 755 |
| SduI | GDGCHC | 2 cut(s) | 105, 955 |
| SfaNI | GCATC | 9 cut(s) | 112, 889, 1471, 1855, 2005, 2020, 2028, 2050, 2056 |
| SfcI | CTRYAG | 1 cut(s) | 73 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1397 |
| SinI | GGWCC | 3 cut(s) | 541, 1465, 1894 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 426, 769, 1178 |
| Sse9I | AATT | 1 cut(s) | 311 |
| SseBI | AGGCCT | 1 cut(s) | 1766 |
| SsiI | CCGC | 6 cut(s) | 5, 330, 458, 568, 1009, 1323 |
| SstI | GAGCTC | 1 cut(s) | 105 |
| StuI | AGGCCT | 1 cut(s) | 1766 |
| StyD4I | CCNGG | 2 cut(s) | 27, 753 |
| StyI | CCWWGG | 4 cut(s) | 306, 1057, 1548, 1812 |
| TaaI | ACNGT | 5 cut(s) | 242, 475, 1034, 1685, 2027 |
| TaiI | ACGT | 1 cut(s) | 20 |
| TaqI | TCGA | 4 cut(s) | 171, 1692, 1799, 1914 |
| TaqII | GACCGA | 1 cut(s) | 344 |
| TasI | AATT | 1 cut(s) | 311 |
| TauI | GCSGC | 2 cut(s) | 332, 570 |
| TfiI | GAWTC | 2 cut(s) | 1257, 1749 |
| Tru1I | TTAA | 4 cut(s) | 585, 1068, 1101, 2098 |
| Tru9I | TTAA | 4 cut(s) | 585, 1068, 1101, 2098 |
| TscAI | CASTG | 3 cut(s) | 247, 646, 1893 |
| TseFI | GTSAC | 5 cut(s) | 475, 762, 1354, 1652, 1711 |
| TseI | GCWGC | 2 cut(s) | 1123, 2076 |
| Tsp45I | GTSAC | 5 cut(s) | 475, 762, 1354, 1652, 1711 |
| TspDTI | ATGAA | 6 cut(s) | 592, 729, 1009, 1379, 1462, 1769 |
| TspGWI | ACGGA | 3 cut(s) | 86, 945, 1139 |
| TspRI | CASTG | 3 cut(s) | 247, 646, 1893 |
| Tth111I | GACNNNGTC | 1 cut(s) | 401 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 870 |
| VpaK11BI | GGWCC | 3 cut(s) | 541, 1465, 1894 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 536 |
| XapI | RAATTY | 1 cut(s) | 311 |
| XceI | RCATGY | 1 cut(s) | 1798 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 265, 313, 621 |
| XmiI | GTMKAC | 1 cut(s) | 1692 |