Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0005956

Physical Location & Seq

Genomic Coordinates Forward (+)

84433403 .. 84437613

Gene Structure 4211 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG497500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGTATGGTGTTCTATTTATGCAGGCTCTTGACAAGATTAGATTTGAGAGCTTGACTGACAAGAGCAAGCTTGAGTCTCAGCCAGAGCTCTTTATCCACATTATCCCCGACAAGACCAACAACACATTGACTATTATTGACAGTGGTATTGGGATGACAAAGGCTGATTTGGTCAACAACCTTGGTACCATTGCAAGGTCTGGAACCAAGGAATTCATGGAAGCCTTGGCTGCTGGTGCTGATGTTAGCATGATTGGTCAGTTTGGTGTTGGGTTCTACTCTGCATATCTTGTTGCTGAGAAGGTCATTGTCACCACCAAGCACAATGATGATGAGCAGTACATCTGGGAGTCTCAAGCTGGAGGATCTTTCACAGTGACCAGGGACTCTGGTGAGCCTCTTGGCAGGGGTACAAAGATCTGCCTTCACCTAAAGGAGGACCAACTTGAGTACCTTGAAGAGCGCAGACTCAAGGATTTGATCAAGAAGCACTCTGAGTTCATCAGCTACCCAATTTCCTTGTGGATTGAGAAGACCACTGAGAAGGAGATTTCTGATGATGAGGATGAAGAAGAAAAGAAGGAAGAGGAAGGAAAGGTAGAGGAAGTTGACGAAGAGAAGGAGAAGGAGGAGAAGAAAAAGAAGAAAATCCAGGAAATTTCTCATGAATGGTCATTGGTTAACAAGCAAAAGCCCATCTGGATGAGGAAGCCAGAAGAAATCAACAAGGAAGAGTACTCTGCTTTTTACAAGAGTCTTACCAATGACTGGGAAGAGCACCTTTCTGTCAAGCACTTCTCAGTTGAGGGTCAGCTGGAATTCAAGGCCATCCTCTTTGTTCCCAAGAGGGCTCCATTTGATCTCTTCGACACAAGGAAGAAGCCCAACAACATCAAGCTCTATGTCCGCCGTGTCTTTATCATGGACAACTGTGAGGAGTTGATCCCTGAATACCTTGGCTTTGTAAAGGGTATTGTTGACTCTGAGGATCTTCCCCTCAATATTTCCAGAGAGATGTTGCAGCAGAACAAGATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGTATTGAGATGTTCACTGAGATTTCTGAGAACAAGGAGGACTACAACAAGTTCTACGAGTCTTTCTCGAAGAACCTCAAGCTCGGAATCCACGAGGACTCCCAGAACAAGACCAAGCTTGCTGATTTGTTGAGGTACCACTCAACCAAGAGTGGTGATGAGATGACCAGCCTTAAGGACTATGTCACAAGGATGAAGGAGGGCCAGCAAGATATCTACTACATCACCGGTGAAAGCAAGAAGGCAGTTGAGAACTCTCCTTTCCTAGAGAAGCTTAAGAAGAAGGGATATGAGGTTCTGTTCATGGTTGATGCCATTGATGAGTATGCAGTTGGTCAGCTCAAGGAGTATGAGGGCAAAAAGCTTGTCTCTGCCACCAAGGAAGGTCTCAAGCTTGATGAGACTGAGGATGAGGCAAAGAAGAAAGAAGAGTTGAAGGAGAAGTTTGAGGGACTCTGCAAGGTTGTCAAGGATGTGTTGGGTGACCGTGTTGAGAAGGTTGTTGTGTCTGACCGTGTGGTCGATTCTCCCTGCTGTTTGGTGACTGGCGAGTATGGCTGGACTGCCAACATGGAAAGGATCATGAAGGCTCAGGCTTTGAGGGATAACAGCATGGCTGGTTACATGTCTTCCAAGAAGACCATGGAGATCAACCCCGAGAACCCAATCATGGAGGAGCTCAGAAAGAGGGCTGATGCAGACAAGAACGACAAGTCAGTGAAGGACCTTGTGCTCCTTCTCTTTGAGACTGCCCTGCTTACCTCTGGGTTCAGCCTTGATGACCCCAACACCTTCGGCAACAGGATCCACAGGATGTTGAAGCTTGGACTGAGCATTGATGATGATGCCGTTGATGGTGATGCTGACATGCCCCCGTTGGAGGATGTTGATGCCGAGGCTGAGAGCAAGATGGAGGAAGTCGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 ko04151 ko04217 ko04612 ko04621 ko04626 ko04657 ko04659 ko04914 ko04915 ko05200 ko05215 ko05418 map04141 map04151 map04217 map04612 map04621 map04626 map04657 map04659 map04914 map04915 map05200 map05215 map05418

Pfam Domains

Protein Families

HATPase_c HSP90

Protein Analysis

664

Amino Acids

76.35

Weight (kDa)

5.03

Isoelectric Point (pI)

38.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c	PF02518	27 - 147	6.8e-06	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3	PF13589	34 - 113	3.5e-07	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90	PF00183	150 - 648	8.9e-240	Hsp90 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005956)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56000 AT5G56010 AT5G56030 AT5G56030
fragaria_vesca	FvH4_3g42240 FvH4_3g42240 FvH4_3g42240 FvH4_3g42240 FvH4_3g42240
malus_domestica	MD03G1036600.v1.1 MD09G1000500.v1.1 MD11G1037400.v1.1
prunus_persica	Prupe.6G028600_v2.0.a1
pyrus_communis	pycom03g02800 pycom11g03100
rosa_chinensis	RchiOBHm_Chr5g0075541
rosa_laevigata	RLG00000036574
rosa_multiflora	Rmu_sc0003437.1_g000003 Rmu_sc0024773.1_g000002
rosa_roxburghii	Rroxscaffold_1G00006010
rosa_rugosa	Rorug05G0440100 Rorug05G0440200
rosa_samantha	Rh5AG497500 Rh5BG518400 Rh5CG542000 Rh5DG530700
rosa_wichuraiana	Rw5G046120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1586
Acc65I	GGTACC	2 cut(s)	185, 1203
AccB1I	GGYRCC	2 cut(s)	185, 1203
AccB7I	CCANNNNNTGG	1 cut(s)	768
AccI	GTMKAC	1 cut(s)	1989
AciI	CCGC	2 cut(s)	907, 1048
AclWI	GGATC	6 cut(s)	373, 937, 996, 1655, 1867, 1880
AcsI	RAATTY	3 cut(s)	212, 657, 818
AfaI	GTAC	6 cut(s)	187, 341, 412, 452, 737, 1205
AfiI	CCNNNNNNNGG	5 cut(s)	195, 436, 768, 1738, 1948
AflII	CTTAAG	2 cut(s)	1241, 1343
AflIII	ACRYGT	1 cut(s)	1692
AgeI	ACCGGT	1 cut(s)	1295
AgsI	TTSAA	5 cut(s)	458, 823, 1039, 1504, 1888
AjnI	CCWGG	2 cut(s)	380, 651
AloI	GAACNNNNNNTCC	2 cut(s)	1347, 1379
Alw21I	GWGCWC	4 cut(s)	90, 780, 1749, 1803
Alw26I	GTCTC	6 cut(s)	81, 357, 1441, 1460, 1463, 1808
AlwI	GGATC	6 cut(s)	373, 937, 996, 1655, 1867, 1880
Ama87I	CYCGRG	1 cut(s)	1724
AoxI	GGCC	2 cut(s)	825, 1270
ApeKI	GCWGC	2 cut(s)	230, 1021
ApoI	RAATTY	3 cut(s)	212, 657, 818
ArsI	GACNNNNNNTTYG	2 cut(s)	1419, 1451
AsiGI	ACCGGT	1 cut(s)	1295
Asp718I	GGTACC	2 cut(s)	185, 1203
AspLEI	GCGC	1 cut(s)	465
AspS9I	GGNCC	3 cut(s)	439, 1270, 1792
AvaI	CYCGRG	1 cut(s)	1724
AvaII	GGWCC	2 cut(s)	439, 1792
BaeI	ACNNNNGTAYC	4 cut(s)	169, 202, 434, 467
BamHI	GGATCC	1 cut(s)	1872
BanI	GGYRCC	2 cut(s)	185, 1203
BanII	GRGCYC	3 cut(s)	90, 853, 1749
BauI	CACGAG	1 cut(s)	1160
BbsI	GAAGAC	3 cut(s)	539, 1689, 1712
Bbv12I	GWGCWC	4 cut(s)	90, 780, 1749, 1803
BbvI	GCAGC	2 cut(s)	217, 1033
BccI	CCATC	4 cut(s)	704, 836, 1916, 1972
BceAI	ACGGC	2 cut(s)	894, 1901
BciT130I	CCWGG	2 cut(s)	382, 653
BclI	TGATCA	1 cut(s)	480
BcoDI	GTCTC	6 cut(s)	81, 357, 1441, 1460, 1463, 1808
BfaI	CTAG	1 cut(s)	1334
BfrI	CTTAAG	2 cut(s)	1241, 1343
BglII	AGATCT	2 cut(s)	417, 1032
BisI	GCNGC	2 cut(s)	231, 1022
BlsI	GCNGC	2 cut(s)	232, 1023
BmcAI	AGTACT	1 cut(s)	737
Bme1390I	CCNGG	2 cut(s)	382, 653
Bme18I	GGWCC	2 cut(s)	439, 1792
BmeT110I	CYCGRG	1 cut(s)	1724
BmgT120I	GGNCC	3 cut(s)	439, 1270, 1792
BmiI	GGNNCC	5 cut(s)	187, 205, 852, 1205, 1874
BmrFI	CCNGG	2 cut(s)	382, 653
BmrI	ACTGGG	1 cut(s)	778
BmsI	GCATC	5 cut(s)	1369, 1753, 1903, 1918, 1948
BmuI	ACTGGG	1 cut(s)	778
BpiI	GAAGAC	3 cut(s)	539, 1689, 1712
BplI	GAGNNNNNCTC	2 cut(s)	1118, 1150
BpmI	CTGGAG	1 cut(s)	381
Bpu10I	CCTNAGC	1 cut(s)	1659
BpuEI	CTTGAG	7 cut(s)	92, 339, 455, 467, 1130, 1394, 1442
BsaI	GGTCTC	1 cut(s)	1460
BsaJI	CCNNGG	8 cut(s)	181, 207, 225, 381, 955, 1446, 1710, 1962
BsaWI	WCCGGW	1 cut(s)	1295
BsaXI	ACNNNNNCTCC	2 cut(s)	1151, 1181
Bsc4I	CCNNNNNNNGG	5 cut(s)	195, 436, 768, 1738, 1948
Bse118I	RCCGGY	1 cut(s)	1295
Bse1I	ACTGG	2 cut(s)	773, 1618
Bse3DI	GCAATG	1 cut(s)	189
BseBI	CCWGG	2 cut(s)	382, 653
BseDI	CCNNGG	8 cut(s)	181, 207, 225, 381, 955, 1446, 1710, 1962
BseLI	CCNNNNNNNGG	5 cut(s)	195, 436, 768, 1738, 1948
BseMI	GCAATG	1 cut(s)	189
BseNI	ACTGG	2 cut(s)	773, 1618
BseRI	GAGGAG	3 cut(s)	644, 950, 1757
BseXI	GCAGC	2 cut(s)	217, 1033
BshFI	GGCC	2 cut(s)	827, 1272
BshNI	GGYRCC	2 cut(s)	185, 1203
BshTI	ACCGGT	1 cut(s)	1295
BsiHKAI	GWGCWC	4 cut(s)	90, 780, 1749, 1803
BsiHKCI	CYCGRG	1 cut(s)	1724
BsiSI	CCGG	1 cut(s)	1296
BslFI	GGGAC	2 cut(s)	398, 1533
BslI	CCNNNNNNNGG	5 cut(s)	195, 436, 768, 1738, 1948
BsmAI	GTCTC	6 cut(s)	81, 357, 1441, 1460, 1463, 1808
BsmFI	GGGAC	2 cut(s)	398, 1533
BsnI	GGCC	2 cut(s)	827, 1272
Bso31I	GGTCTC	1 cut(s)	1460
BsoBI	CYCGRG	1 cut(s)	1724
Bsp1286I	GDGCHC	5 cut(s)	90, 780, 853, 1749, 1803
Bsp19I	CCATGG	1 cut(s)	1710
BspACI	CCGC	2 cut(s)	907, 1048
BspANI	GGCC	2 cut(s)	827, 1272
BspHI	TCATGA	2 cut(s)	664, 1650
BspLI	GGNNCC	5 cut(s)	187, 205, 852, 1205, 1874
BspPI	GGATC	6 cut(s)	373, 937, 996, 1655, 1867, 1880
BspQI	GCTCTTC	2 cut(s)	453, 768
BspT107I	GGYRCC	2 cut(s)	185, 1203
BspTI	CTTAAG	2 cut(s)	1241, 1343
BspTNI	GGTCTC	1 cut(s)	1460
BsrDI	GCAATG	1 cut(s)	189
BsrFI	RCCGGY	1 cut(s)	1295
BsrI	ACTGG	2 cut(s)	773, 1618
BssAI	RCCGGY	1 cut(s)	1295
BssECI	CCNNGG	8 cut(s)	181, 207, 225, 381, 955, 1446, 1710, 1962
BssSI	CACGAG	1 cut(s)	1160
BssT1I	CCWWGG	6 cut(s)	181, 207, 225, 955, 1446, 1710
Bst2BI	CACGAG	1 cut(s)	1160
Bst2UI	CCWGG	2 cut(s)	382, 653
Bst4CI	ACNGT	5 cut(s)	143, 376, 932, 1556, 1583
Bst6I	CTCTTC	7 cut(s)	453, 579, 609, 726, 768, 869, 1491
BstAFI	CTTAAG	2 cut(s)	1241, 1343
BstC8I	GCNNGC	4 cut(s)	24, 68, 1188, 1274
BstDSI	CCRYGG	1 cut(s)	1710
BstEII	GGTNACC	1 cut(s)	1550
BstENI	CCTNNNNNAGG	1 cut(s)	434
BstHHI	GCGC	1 cut(s)	465
BstMAI	GTCTC	6 cut(s)	81, 357, 1441, 1460, 1463, 1808
BstMWI	GCNNNNNNNGC	3 cut(s)	230, 236, 1623
BstNI	CCWGG	2 cut(s)	382, 653
BstNSI	RCATGY	2 cut(s)	1696, 1939
BstPI	GGTNACC	1 cut(s)	1550
BstSCI	CCNGG	2 cut(s)	380, 651
BstV1I	GCAGC	2 cut(s)	217, 1033
BstV2I	GAAGAC	3 cut(s)	539, 1689, 1712
BstX2I	RGATCY	5 cut(s)	365, 417, 988, 1032, 1872
BstYI	RGATCY	5 cut(s)	365, 417, 988, 1032, 1872
BsuRI	GGCC	2 cut(s)	827, 1272
BtgI	CCRYGG	1 cut(s)	1710
BtsIMutI	CAGTG	5 cut(s)	148, 381, 537, 1083, 1791
Cac8I	GCNNGC	4 cut(s)	24, 68, 1188, 1274
CciI	TCATGA	2 cut(s)	664, 1650
CfoI	GCGC	1 cut(s)	465
Cfr10I	RCCGGY	1 cut(s)	1295
Cfr13I	GGNCC	3 cut(s)	439, 1270, 1792
Csp6I	GTAC	6 cut(s)	186, 340, 411, 451, 736, 1204
CspAI	ACCGGT	1 cut(s)	1295
CviQI	GTAC	6 cut(s)	186, 340, 411, 451, 736, 1204
DrdI	GACNNNNNNGTC	1 cut(s)	1586
DseDI	GACNNNNNNGTC	1 cut(s)	1586
Eam1104I	CTCTTC	7 cut(s)	453, 579, 609, 726, 768, 869, 1491
EarI	CTCTTC	7 cut(s)	453, 579, 609, 726, 768, 869, 1491
EciI	GGCGGA	1 cut(s)	896
Ecl136II	GAGCTC	2 cut(s)	88, 1747
Eco130I	CCWWGG	6 cut(s)	181, 207, 225, 955, 1446, 1710
Eco24I	GRGCYC	3 cut(s)	90, 853, 1749
Eco31I	GGTCTC	1 cut(s)	1460
Eco32I	GATATC	1 cut(s)	1282
Eco47I	GGWCC	2 cut(s)	439, 1792
Eco53kI	GAGCTC	2 cut(s)	88, 1747
Eco88I	CYCGRG	1 cut(s)	1724
Eco91I	GGTNACC	1 cut(s)	1550
EcoICRI	GAGCTC	2 cut(s)	88, 1747
EcoNI	CCTNNNNNAGG	1 cut(s)	434
EcoO109I	RGGNCCY	1 cut(s)	1792
EcoO65I	GGTNACC	1 cut(s)	1550
EcoRI	GAATTC	2 cut(s)	212, 818
EcoRII	CCWGG	2 cut(s)	380, 651
EcoRV	GATATC	1 cut(s)	1282
EcoT14I	CCWWGG	6 cut(s)	181, 207, 225, 955, 1446, 1710
EcoT38I	GRGCYC	3 cut(s)	90, 853, 1749
ErhI	CCWWGG	6 cut(s)	181, 207, 225, 955, 1446, 1710
FalI	AAGNNNNNCTT	2 cut(s)	765, 797
FaqI	GGGAC	2 cut(s)	398, 1533
FbaI	TGATCA	1 cut(s)	480
FblI	GTMKAC	1 cut(s)	1989
Fnu4HI	GCNGC	2 cut(s)	231, 1022
FriOI	GRGCYC	3 cut(s)	90, 853, 1749
Fsp4HI	GCNGC	2 cut(s)	231, 1022
FspBI	CTAG	1 cut(s)	1334
GlaI	GCGC	1 cut(s)	464
GluI	GCNGC	2 cut(s)	231, 1022
GsuI	CTGGAG	1 cut(s)	381
HaeIII	GGCC	2 cut(s)	827, 1272
HapII	CCGG	1 cut(s)	1296
HhaI	GCGC	1 cut(s)	465
Hin6I	GCGC	1 cut(s)	463
HinP1I	GCGC	1 cut(s)	463
HincII	GTYRAC	5 cut(s)	175, 610, 682, 979, 1990
HindII	GTYRAC	5 cut(s)	175, 610, 682, 979, 1990
HindIII	AAGCTT	6 cut(s)	68, 1184, 1340, 1430, 1460, 1889
HpaI	GTTAAC	1 cut(s)	682
HpaII	CCGG	1 cut(s)	1296
Hpy166II	GTNNAC	6 cut(s)	175, 610, 682, 979, 1083, 1990
Hpy188I	TCNGA	7 cut(s)	496, 556, 985, 1096, 1154, 1579, 1751
Hpy188III	TCNNGA	9 cut(s)	29, 201, 484, 665, 700, 1008, 1036, 1135, 1651
Hpy8I	GTNNAC	6 cut(s)	175, 610, 682, 979, 1083, 1990
HpyCH4III	ACNGT	5 cut(s)	143, 376, 932, 1556, 1583
HpyCH4V	TGCA	7 cut(s)	22, 194, 284, 1021, 1397, 1527, 1766
HpyF10VI	GCNNNNNNNGC	3 cut(s)	230, 236, 1623
HspAI	GCGC	1 cut(s)	463
KpnI	GGTACC	2 cut(s)	189, 1207
Ksp22I	TGATCA	1 cut(s)	480
KspAI	GTTAAC	1 cut(s)	682
LguI	GCTCTTC	2 cut(s)	453, 768
LmnI	GCTCC	3 cut(s)	856, 1744, 1806
Lsp1109I	GCAGC	2 cut(s)	217, 1033
LweI	GCATC	5 cut(s)	1369, 1753, 1903, 1918, 1948
MaeI	CTAG	1 cut(s)	1334
MaeIII	GTNAC	6 cut(s)	310, 376, 1252, 1550, 1609, 1688
MflI	RGATCY	5 cut(s)	365, 417, 988, 1032, 1872
MhlI	GDGCHC	5 cut(s)	90, 780, 853, 1749, 1803
MluCI	AATT	4 cut(s)	212, 513, 657, 818
MlyI	GAGTC	9 cut(s)	83, 359, 380, 462, 763, 974, 1136, 1160, 1515
MmeI	TCCRAC	1 cut(s)	1926
MseI	TTAA	3 cut(s)	681, 1242, 1344
MslI	CAYNNNNRTG	3 cut(s)	327, 701, 1259
MspA1I	CMGCKG	1 cut(s)	814
MspCI	CTTAAG	2 cut(s)	1241, 1343
MspI	CCGG	1 cut(s)	1296
MspR9I	CCNGG	2 cut(s)	382, 653
MvaI	CCWGG	2 cut(s)	382, 653
MwoI	GCNNNNNNNGC	3 cut(s)	230, 236, 1623
NcoI	CCATGG	1 cut(s)	1710
NlaIV	GGNNCC	5 cut(s)	187, 205, 852, 1205, 1874
NmeAIII	GCCGAG	1 cut(s)	1987
NmuCI	GTSAC	5 cut(s)	310, 376, 1252, 1550, 1609
NspI	RCATGY	2 cut(s)	1696, 1939
PagI	TCATGA	2 cut(s)	664, 1650
PciI	ACATGT	1 cut(s)	1692
PciSI	GCTCTTC	2 cut(s)	453, 768
PcsI	WCGNNNNNNNCGW	1 cut(s)	1158
PfeI	GAWTC	2 cut(s)	1155, 1592
PflFI	GACNNNGTC	1 cut(s)	1250
PflMI	CCANNNNNTGG	1 cut(s)	768
PfoI	TCCNGGA	1 cut(s)	651
PinAI	ACCGGT	1 cut(s)	1295
PkrI	GCNGC	2 cut(s)	232, 1023
PleI	GAGTC	9 cut(s)	82, 358, 380, 462, 762, 974, 1135, 1160, 1515
PpsI	GAGTC	9 cut(s)	82, 358, 380, 462, 762, 974, 1135, 1160, 1515
PpuMI	RGGWCCY	1 cut(s)	1792
PscI	ACATGT	1 cut(s)	1692
Psp124BI	GAGCTC	2 cut(s)	90, 1749
Psp5II	RGGWCCY	1 cut(s)	1792
Psp6I	CCWGG	2 cut(s)	380, 651
PspEI	GGTNACC	1 cut(s)	1550
PspGI	CCWGG	2 cut(s)	380, 651
PspN4I	GGNNCC	5 cut(s)	187, 205, 852, 1205, 1874
PspPI	GGNCC	3 cut(s)	439, 1270, 1792
PspPPI	RGGWCCY	1 cut(s)	1792
PsuI	RGATCY	5 cut(s)	365, 417, 988, 1032, 1872
PsyI	GACNNNGTC	1 cut(s)	1250
PvuII	CAGCTG	1 cut(s)	814
RsaI	GTAC	6 cut(s)	187, 341, 412, 452, 737, 1205
RsaNI	GTAC	6 cut(s)	186, 340, 411, 451, 736, 1204
RseI	CAYNNNNRTG	3 cut(s)	327, 701, 1259
SacI	GAGCTC	2 cut(s)	90, 1749
SalI	GTCGAC	1 cut(s)	1988
SapI	GCTCTTC	2 cut(s)	453, 768
SaqAI	TTAA	3 cut(s)	681, 1242, 1344
SatI	GCNGC	2 cut(s)	231, 1022
Sau96I	GGNCC	3 cut(s)	439, 1270, 1792
ScaI	AGTACT	1 cut(s)	737
SchI	GAGTC	9 cut(s)	83, 359, 380, 462, 763, 974, 1136, 1160, 1515
ScrFI	CCNGG	2 cut(s)	382, 653
SduI	GDGCHC	5 cut(s)	90, 780, 853, 1749, 1803
SfaNI	GCATC	5 cut(s)	1369, 1753, 1903, 1918, 1948
SgrAI	CRCCGGYG	1 cut(s)	1295
SinI	GGWCC	2 cut(s)	439, 1792
SmiMI	CAYNNNNRTG	3 cut(s)	327, 701, 1259
SmlI	CTYRAG	9 cut(s)	71, 354, 446, 470, 1145, 1241, 1343, 1409, 1457
SmoI	CTYRAG	9 cut(s)	71, 354, 446, 470, 1145, 1241, 1343, 1409, 1457
Sse9I	AATT	4 cut(s)	212, 513, 657, 818
SsiI	CCGC	2 cut(s)	907, 1048
SspI	AATATT	1 cut(s)	1003
SspMI	CTAG	1 cut(s)	1334
SstI	GAGCTC	2 cut(s)	90, 1749
StyD4I	CCNGG	2 cut(s)	380, 651
StyI	CCWWGG	6 cut(s)	181, 207, 225, 955, 1446, 1710
TaaI	ACNGT	5 cut(s)	143, 376, 932, 1556, 1583
TaqI	TCGA	4 cut(s)	867, 1136, 1590, 1989
TasI	AATT	4 cut(s)	212, 513, 657, 818
TatI	WGTACW	2 cut(s)	339, 735
TfiI	GAWTC	2 cut(s)	1155, 1592
Tru1I	TTAA	3 cut(s)	681, 1242, 1344
Tru9I	TTAA	3 cut(s)	681, 1242, 1344
TscAI	CASTG	5 cut(s)	148, 381, 544, 1090, 1791
TseFI	GTSAC	5 cut(s)	310, 376, 1252, 1550, 1609
TseI	GCWGC	2 cut(s)	230, 1021
Tsp45I	GTSAC	5 cut(s)	310, 376, 1252, 1550, 1609
TspDTI	ATGAA	7 cut(s)	205, 490, 582, 681, 1277, 1360, 1667
TspRI	CASTG	5 cut(s)	148, 381, 544, 1090, 1791
Tth111I	GACNNNGTC	1 cut(s)	1250
Van91I	CCANNNNNTGG	1 cut(s)	768
Vha464I	CTTAAG	2 cut(s)	1241, 1343
VpaK11BI	GGWCC	2 cut(s)	439, 1792
XagI	CCTNNNNNAGG	1 cut(s)	434
XapI	RAATTY	3 cut(s)	212, 657, 818
XceI	RCATGY	2 cut(s)	1696, 1939
XcmI	CCANNNNNNNNNTGG	3 cut(s)	214, 519, 1708
XmiI	GTMKAC	1 cut(s)	1989
XspI	CTAG	1 cut(s)	1334
ZrmI	AGTACT	1 cut(s)	737

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.