Domain of unknown function (DUF4228)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G06980 AT2G30230 |
| fragaria_vesca | FvH4_3g39820 |
| malus_domestica | MD03G1057000.v1.1 MD11G1058700.v1.1 |
| prunus_persica | Prupe.6G047800_v2.0.a1 |
| pyrus_communis | pycom03g04530 pycom11g04880 |
| rosa_chinensis | RchiOBHm_Chr5g0071711 |
| rosa_laevigata | RLG00000036243 |
| rosa_multiflora | Rmu_sc0022933.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00009470 |
| rosa_rugosa | Rorug05G0414300 |
| rosa_samantha | Rh5BG490000 Rh5CG514000 Rh5DG500800 |
| rosa_wichuraiana | Rw5G043710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 417 |
| AccIII | TCCGGA | 1 cut(s) | 63 |
| AciI | CCGC | 6 cut(s) | 45, 220, 288, 343, 388, 421 |
| AclWI | GGATC | 5 cut(s) | 55, 74, 118, 235, 399 |
| AcoI | YGGCCR | 1 cut(s) | 403 |
| AcyI | GRCGYC | 1 cut(s) | 174 |
| AfaI | GTAC | 1 cut(s) | 337 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 417 |
| AgsI | TTSAA | 1 cut(s) | 79 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 162, 194 |
| AluBI | AGCT | 3 cut(s) | 50, 165, 214 |
| AluI | AGCT | 3 cut(s) | 50, 165, 214 |
| Alw21I | GWGCWC | 3 cut(s) | 52, 216, 317 |
| Alw26I | GTCTC | 1 cut(s) | 200 |
| AlwI | GGATC | 5 cut(s) | 55, 74, 118, 235, 399 |
| Ama87I | CYCGRG | 1 cut(s) | 431 |
| Aor13HI | TCCGGA | 1 cut(s) | 63 |
| AoxI | GGCC | 4 cut(s) | 399, 403, 408, 422 |
| ApeKI | GCWGC | 1 cut(s) | 225 |
| AspS9I | GGNCC | 2 cut(s) | 399, 408 |
| AsuC2I | CCSGG | 2 cut(s) | 398, 407 |
| AsuHPI | GGTGA | 3 cut(s) | 131, 192, 433 |
| AvaI | CYCGRG | 1 cut(s) | 431 |
| BanII | GRGCYC | 2 cut(s) | 52, 216 |
| BbsI | GAAGAC | 1 cut(s) | 369 |
| Bbv12I | GWGCWC | 3 cut(s) | 52, 216, 317 |
| BbvI | GCAGC | 1 cut(s) | 237 |
| BceAI | ACGGC | 2 cut(s) | 286, 401 |
| BcnI | CCSGG | 2 cut(s) | 398, 407 |
| BcoDI | GTCTC | 1 cut(s) | 200 |
| BfaI | CTAG | 1 cut(s) | 285 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 402, 407 |
| BisI | GCNGC | 3 cut(s) | 226, 289, 422 |
| BlsI | GCNGC | 3 cut(s) | 227, 290, 423 |
| Bme1390I | CCNGG | 2 cut(s) | 398, 407 |
| BmeT110I | CYCGRG | 1 cut(s) | 431 |
| BmgT120I | GGNCC | 2 cut(s) | 399, 408 |
| BmrFI | CCNGG | 2 cut(s) | 398, 407 |
| BmsI | GCATC | 2 cut(s) | 237, 447 |
| BpiI | GAAGAC | 1 cut(s) | 369 |
| BpuEI | CTTGAG | 1 cut(s) | 200 |
| BpuMI | CCSGG | 2 cut(s) | 398, 407 |
| BsaAI | YACGTR | 1 cut(s) | 88 |
| BsaBI | GATNNNNATC | 1 cut(s) | 65 |
| BsaHI | GRCGYC | 1 cut(s) | 174 |
| BsaJI | CCNNGG | 1 cut(s) | 169 |
| BsaWI | WCCGGW | 3 cut(s) | 63, 202, 259 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 417 |
| Bse118I | RCCGGY | 2 cut(s) | 116, 401 |
| Bse8I | GATNNNNATC | 1 cut(s) | 65 |
| BseAI | TCCGGA | 1 cut(s) | 63 |
| BseDI | CCNNGG | 1 cut(s) | 169 |
| BseJI | GATNNNNATC | 1 cut(s) | 65 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 417 |
| BseMII | CTCAG | 1 cut(s) | 143 |
| BseX3I | CGGCCG | 1 cut(s) | 403 |
| BseXI | GCAGC | 1 cut(s) | 237 |
| BseYI | CCCAGC | 1 cut(s) | 161 |
| Bsh1285I | CGRYCG | 2 cut(s) | 343, 406 |
| BshFI | GGCC | 4 cut(s) | 401, 405, 410, 424 |
| BsiEI | CGRYCG | 2 cut(s) | 343, 406 |
| BsiHKAI | GWGCWC | 3 cut(s) | 52, 216, 317 |
| BsiHKCI | CYCGRG | 1 cut(s) | 431 |
| BsiSI | CCGG | 7 cut(s) | 64, 117, 203, 260, 397, 402, 406 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 417 |
| BsmAI | GTCTC | 1 cut(s) | 200 |
| BsmBI | CGTCTC | 1 cut(s) | 200 |
| BsmI | GAATGC | 1 cut(s) | 103 |
| BsnI | GGCC | 4 cut(s) | 401, 405, 410, 424 |
| BsoBI | CYCGRG | 1 cut(s) | 431 |
| Bsp1286I | GDGCHC | 3 cut(s) | 52, 216, 317 |
| Bsp13I | TCCGGA | 1 cut(s) | 63 |
| Bsp143I | GATC | 5 cut(s) | 60, 66, 123, 240, 391 |
| BspACI | CCGC | 6 cut(s) | 45, 220, 288, 343, 388, 421 |
| BspANI | GGCC | 4 cut(s) | 401, 405, 410, 424 |
| BspCNI | CTCAG | 1 cut(s) | 144 |
| BspEI | TCCGGA | 1 cut(s) | 63 |
| BspPI | GGATC | 5 cut(s) | 55, 74, 118, 235, 399 |
| BsrFI | RCCGGY | 2 cut(s) | 116, 401 |
| BssAI | RCCGGY | 2 cut(s) | 116, 401 |
| BssECI | CCNNGG | 1 cut(s) | 169 |
| BssMI | GATC | 5 cut(s) | 60, 66, 123, 240, 391 |
| BssNI | GRCGYC | 1 cut(s) | 174 |
| BssT1I | CCWWGG | 1 cut(s) | 169 |
| Bst4CI | ACNGT | 2 cut(s) | 11, 415 |
| Bst6I | CTCTTC | 1 cut(s) | 269 |
| BstACI | GRCGYC | 1 cut(s) | 174 |
| BstBAI | YACGTR | 1 cut(s) | 88 |
| BstC8I | GCNNGC | 1 cut(s) | 403 |
| BstDEI | CTNAG | 2 cut(s) | 14, 152 |
| BstKTI | GATC | 5 cut(s) | 63, 69, 126, 243, 394 |
| BstMAI | GTCTC | 1 cut(s) | 200 |
| BstMBI | GATC | 5 cut(s) | 60, 66, 123, 240, 391 |
| BstMCI | CGRYCG | 2 cut(s) | 343, 406 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 162, 171, 402, 407 |
| BstSCI | CCNGG | 2 cut(s) | 396, 405 |
| BstSNI | TACGTA | 1 cut(s) | 88 |
| BstV1I | GCAGC | 1 cut(s) | 237 |
| BstV2I | GAAGAC | 1 cut(s) | 369 |
| BstX2I | RGATCY | 1 cut(s) | 123 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 80 |
| BstYI | RGATCY | 1 cut(s) | 123 |
| BstZI | CGGCCG | 1 cut(s) | 403 |
| BsuRI | GGCC | 4 cut(s) | 401, 405, 410, 424 |
| BtsIMutI | CAGTG | 1 cut(s) | 363 |
| Cac8I | GCNNGC | 1 cut(s) | 403 |
| Cfr10I | RCCGGY | 2 cut(s) | 116, 401 |
| Cfr13I | GGNCC | 2 cut(s) | 399, 408 |
| CseI | GACGC | 1 cut(s) | 163 |
| Csp6I | GTAC | 1 cut(s) | 336 |
| CviQI | GTAC | 1 cut(s) | 336 |
| DdeI | CTNAG | 2 cut(s) | 14, 152 |
| DpnI | GATC | 5 cut(s) | 62, 68, 125, 242, 393 |
| DpnII | GATC | 5 cut(s) | 60, 66, 123, 240, 391 |
| EaeI | YGGCCR | 1 cut(s) | 403 |
| EagI | CGGCCG | 1 cut(s) | 403 |
| Eam1104I | CTCTTC | 1 cut(s) | 269 |
| EarI | CTCTTC | 1 cut(s) | 269 |
| Ecl136II | GAGCTC | 2 cut(s) | 50, 214 |
| EclXI | CGGCCG | 1 cut(s) | 403 |
| Eco105I | TACGTA | 1 cut(s) | 88 |
| Eco130I | CCWWGG | 1 cut(s) | 169 |
| Eco24I | GRGCYC | 2 cut(s) | 52, 216 |
| Eco52I | CGGCCG | 1 cut(s) | 403 |
| Eco53kI | GAGCTC | 2 cut(s) | 50, 214 |
| Eco88I | CYCGRG | 1 cut(s) | 431 |
| EcoICRI | GAGCTC | 2 cut(s) | 50, 214 |
| EcoT14I | CCWWGG | 1 cut(s) | 169 |
| EcoT38I | GRGCYC | 2 cut(s) | 52, 216 |
| ErhI | CCWWGG | 1 cut(s) | 169 |
| Esp3I | CGTCTC | 1 cut(s) | 200 |
| FaiI | YATR | 2 cut(s) | 257, 418 |
| FauI | CCCGC | 2 cut(s) | 213, 381 |
| Fnu4HI | GCNGC | 3 cut(s) | 226, 289, 422 |
| FriOI | GRGCYC | 2 cut(s) | 52, 216 |
| FseI | GGCCGGCC | 1 cut(s) | 405 |
| Fsp4HI | GCNGC | 3 cut(s) | 226, 289, 422 |
| FspBI | CTAG | 1 cut(s) | 285 |
| GluI | GCNGC | 3 cut(s) | 226, 289, 422 |
| GsaI | CCCAGC | 1 cut(s) | 165 |
| HaeIII | GGCC | 4 cut(s) | 401, 405, 410, 424 |
| HapII | CCGG | 7 cut(s) | 64, 117, 203, 260, 397, 402, 406 |
| HgaI | GACGC | 1 cut(s) | 163 |
| Hin1I | GRCGYC | 1 cut(s) | 174 |
| HpaII | CCGG | 7 cut(s) | 64, 117, 203, 260, 397, 402, 406 |
| HphI | GGTGA | 3 cut(s) | 131, 192, 433 |
| Hpy188I | TCNGA | 1 cut(s) | 153 |
| Hpy188III | TCNNGA | 6 cut(s) | 53, 64, 238, 244, 431, 433 |
| Hpy99I | CGWCG | 3 cut(s) | 179, 186, 307 |
| HpyCH4III | ACNGT | 2 cut(s) | 11, 415 |
| HpyCH4IV | ACGT | 2 cut(s) | 87, 147 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 162, 171, 402, 407 |
| HpyF3I | CTNAG | 2 cut(s) | 14, 152 |
| HpySE526I | ACGT | 2 cut(s) | 87, 147 |
| Hsp92I | GRCGYC | 1 cut(s) | 174 |
| Kpn2I | TCCGGA | 1 cut(s) | 63 |
| KroI | GCCGGC | 1 cut(s) | 401 |
| KroNI | GCCGGC | 1 cut(s) | 403 |
| Kzo9I | GATC | 5 cut(s) | 60, 66, 123, 240, 391 |
| LmnI | GCTCC | 3 cut(s) | 47, 170, 211 |
| LpnPI | CCDG | 9 cut(s) | 55, 77, 130, 175, 216, 273, 410, 415, 419 |
| Lsp1109I | GCAGC | 1 cut(s) | 237 |
| LweI | GCATC | 2 cut(s) | 237, 447 |
| MaeI | CTAG | 1 cut(s) | 285 |
| MaeII | ACGT | 2 cut(s) | 87, 147 |
| MaeIII | GTNAC | 3 cut(s) | 109, 361, 381 |
| MalI | GATC | 5 cut(s) | 62, 68, 125, 242, 393 |
| MboI | GATC | 5 cut(s) | 60, 66, 123, 240, 391 |
| MboII | GAAGA | 7 cut(s) | 104, 243, 277, 280, 283, 286, 369 |
| MflI | RGATCY | 1 cut(s) | 123 |
| MhlI | GDGCHC | 3 cut(s) | 52, 216, 317 |
| MnlI | CCTC | 2 cut(s) | 137, 435 |
| MroI | TCCGGA | 1 cut(s) | 63 |
| MroNI | GCCGGC | 1 cut(s) | 401 |
| MseI | TTAA | 2 cut(s) | 294, 350 |
| MslI | CAYNNNNRTG | 1 cut(s) | 78 |
| MspI | CCGG | 7 cut(s) | 64, 117, 203, 260, 397, 402, 406 |
| MspR9I | CCNGG | 2 cut(s) | 398, 407 |
| Mva1269I | GAATGC | 1 cut(s) | 103 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 162, 171, 402, 407 |
| NaeI | GCCGGC | 1 cut(s) | 403 |
| NciI | CCSGG | 2 cut(s) | 398, 407 |
| NdeII | GATC | 5 cut(s) | 60, 66, 123, 240, 391 |
| NgoMIV | GCCGGC | 1 cut(s) | 401 |
| NmuCI | GTSAC | 3 cut(s) | 109, 361, 381 |
| PaeR7I | CTCGAG | 1 cut(s) | 431 |
| PctI | GAATGC | 1 cut(s) | 103 |
| PdiI | GCCGGC | 1 cut(s) | 403 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 417 |
| PkrI | GCNGC | 3 cut(s) | 227, 290, 423 |
| Ppu21I | YACGTR | 1 cut(s) | 88 |
| Psp124BI | GAGCTC | 2 cut(s) | 52, 216 |
| PspFI | CCCAGC | 1 cut(s) | 161 |
| PspPI | GGNCC | 2 cut(s) | 399, 408 |
| PsuI | RGATCY | 1 cut(s) | 123 |
| RigI | GGCCGGCC | 1 cut(s) | 405 |
| RsaI | GTAC | 1 cut(s) | 337 |
| RsaNI | GTAC | 1 cut(s) | 336 |
| RseI | CAYNNNNRTG | 1 cut(s) | 78 |
| SacI | GAGCTC | 2 cut(s) | 52, 216 |
| SaqAI | TTAA | 2 cut(s) | 294, 350 |
| SatI | GCNGC | 3 cut(s) | 226, 289, 422 |
| Sau3AI | GATC | 5 cut(s) | 60, 66, 123, 240, 391 |
| Sau96I | GGNCC | 2 cut(s) | 399, 408 |
| ScrFI | CCNGG | 2 cut(s) | 398, 407 |
| SduI | GDGCHC | 3 cut(s) | 52, 216, 317 |
| SetI | ASST | 6 cut(s) | 20, 52, 90, 150, 167, 216 |
| SfaNI | GCATC | 2 cut(s) | 237, 447 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 407 |
| Sfr274I | CTCGAG | 1 cut(s) | 431 |
| SlaI | CTCGAG | 1 cut(s) | 431 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 78 |
| SmlI | CTYRAG | 2 cut(s) | 215, 431 |
| SmoI | CTYRAG | 2 cut(s) | 215, 431 |
| SnaBI | TACGTA | 1 cut(s) | 88 |
| SsiI | CCGC | 6 cut(s) | 45, 220, 288, 343, 388, 421 |
| SspMI | CTAG | 1 cut(s) | 285 |
| SstI | GAGCTC | 2 cut(s) | 52, 216 |
| StyD4I | CCNGG | 2 cut(s) | 396, 405 |
| StyI | CCWWGG | 1 cut(s) | 169 |
| TaaI | ACNGT | 2 cut(s) | 11, 415 |
| TaiI | ACGT | 2 cut(s) | 90, 150 |
| TaqI | TCGA | 3 cut(s) | 129, 305, 432 |
| TauI | GCSGC | 2 cut(s) | 291, 424 |
| Tru1I | TTAA | 2 cut(s) | 294, 350 |
| Tru9I | TTAA | 2 cut(s) | 294, 350 |
| TscAI | CASTG | 1 cut(s) | 370 |
| TseFI | GTSAC | 3 cut(s) | 109, 361, 381 |
| TseI | GCWGC | 1 cut(s) | 225 |
| Tsp45I | GTSAC | 3 cut(s) | 109, 361, 381 |
| TspGWI | ACGGA | 1 cut(s) | 224 |
| TspRI | CASTG | 1 cut(s) | 370 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 417 |
| XhoI | CTCGAG | 1 cut(s) | 431 |
| XspI | CTAG | 1 cut(s) | 285 |