Belongs to the Casparian strip membrane proteins (CASP) family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28370 |
| fragaria_vesca | FvH4_3g32060 |
| malus_domestica | MD03G1119100.v1.1 MD11G1136900.v1.1 |
| prunus_persica | Prupe.6G102400_v2.0.a1 |
| pyrus_communis | pycom11g11350 |
| rosa_chinensis | RchiOBHm_Chr5g0058781 |
| rosa_laevigata | RLG00000035248 |
| rosa_multiflora | Rmu_sc0008874.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00021620 |
| rosa_rugosa | Rorug05G0319100 |
| rosa_samantha | Rh5AG383800 Rh5CG419600 Rh5DG411400 |
| rosa_wichuraiana | Rw5G036170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 56, 110 |
| AccBSI | CCGCTC | 2 cut(s) | 73, 164 |
| AciI | CCGC | 8 cut(s) | 71, 120, 156, 159, 162, 298, 387, 492 |
| AclI | AACGTT | 1 cut(s) | 365 |
| AclWI | GGATC | 2 cut(s) | 25, 356 |
| AcoI | YGGCCR | 2 cut(s) | 177, 264 |
| AcsI | RAATTY | 1 cut(s) | 514 |
| AcyI | GRCGYC | 1 cut(s) | 57 |
| AfaI | GTAC | 1 cut(s) | 42 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 19, 76, 88 |
| AgsI | TTSAA | 3 cut(s) | 35, 455, 514 |
| AjnI | CCWGG | 1 cut(s) | 482 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 384, 416 |
| AluBI | AGCT | 6 cut(s) | 145, 230, 255, 377, 426, 461 |
| AluI | AGCT | 6 cut(s) | 145, 230, 255, 377, 426, 461 |
| Alw21I | GWGCWC | 1 cut(s) | 448 |
| Alw44I | GTGCAC | 1 cut(s) | 444 |
| AlwI | GGATC | 2 cut(s) | 25, 356 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 233 |
| AoxI | GGCC | 3 cut(s) | 177, 264, 471 |
| ApaLI | GTGCAC | 1 cut(s) | 444 |
| ApeKI | GCWGC | 5 cut(s) | 227, 230, 255, 371, 374 |
| ApoI | RAATTY | 1 cut(s) | 514 |
| AspLEI | GCGC | 2 cut(s) | 59, 135 |
| AspS9I | GGNCC | 2 cut(s) | 79, 91 |
| AsuC2I | CCSGG | 3 cut(s) | 77, 99, 108 |
| AsuHPI | GGTGA | 4 cut(s) | 17, 325, 353, 481 |
| AvaII | GGWCC | 2 cut(s) | 79, 91 |
| BaeGI | GKGCMC | 2 cut(s) | 433, 448 |
| BalI | TGGCCA | 2 cut(s) | 179, 266 |
| BanI | GGYRCC | 2 cut(s) | 56, 110 |
| Bbv12I | GWGCWC | 1 cut(s) | 448 |
| BbvI | GCAGC | 5 cut(s) | 217, 239, 242, 358, 386 |
| BccI | CCATC | 3 cut(s) | 321, 338, 508 |
| BceAI | ACGGC | 3 cut(s) | 44, 70, 133 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 296, 306, 330, 340 |
| BciT130I | CCWGG | 1 cut(s) | 484 |
| BcnI | CCSGG | 3 cut(s) | 77, 99, 108 |
| BfaI | CTAG | 1 cut(s) | 290 |
| BfmI | CTRYAG | 2 cut(s) | 372, 462 |
| BfoI | RGCGCY | 1 cut(s) | 60 |
| BisI | GCNGC | 7 cut(s) | 159, 162, 228, 231, 256, 372, 375 |
| BlsI | GCNGC | 7 cut(s) | 160, 163, 229, 232, 257, 373, 376 |
| Bme1390I | CCNGG | 4 cut(s) | 77, 99, 108, 484 |
| Bme18I | GGWCC | 2 cut(s) | 79, 91 |
| BmgT120I | GGNCC | 2 cut(s) | 79, 91 |
| BmiI | GGNNCC | 3 cut(s) | 58, 80, 112 |
| BmrFI | CCNGG | 4 cut(s) | 77, 99, 108, 484 |
| BmrI | ACTGGG | 1 cut(s) | 23 |
| BmuI | ACTGGG | 1 cut(s) | 23 |
| BpuMI | CCSGG | 3 cut(s) | 77, 99, 108 |
| BsaHI | GRCGYC | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 4 cut(s) | 13, 115, 337, 468 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 19, 76, 88 |
| Bse1I | ACTGG | 2 cut(s) | 29, 531 |
| BseBI | CCWGG | 1 cut(s) | 484 |
| BseDI | CCNNGG | 4 cut(s) | 13, 115, 337, 468 |
| BseGI | GGATG | 2 cut(s) | 353, 530 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 19, 76, 88 |
| BseMII | CTCAG | 1 cut(s) | 213 |
| BseNI | ACTGG | 2 cut(s) | 29, 531 |
| BseSI | GKGCMC | 2 cut(s) | 433, 448 |
| BseXI | GCAGC | 5 cut(s) | 217, 239, 242, 358, 386 |
| BseYI | CCCAGC | 1 cut(s) | 141 |
| BshFI | GGCC | 3 cut(s) | 179, 266, 473 |
| BshNI | GGYRCC | 2 cut(s) | 56, 110 |
| BsiHKAI | GWGCWC | 1 cut(s) | 448 |
| BsiSI | CCGG | 3 cut(s) | 76, 98, 108 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 19, 76, 88 |
| BsnI | GGCC | 3 cut(s) | 179, 266, 473 |
| Bsp1286I | GDGCHC | 2 cut(s) | 433, 448 |
| Bsp143I | GATC | 3 cut(s) | 17, 348, 415 |
| Bsp19I | CCATGG | 2 cut(s) | 13, 468 |
| BspACI | CCGC | 8 cut(s) | 71, 120, 156, 159, 162, 298, 387, 492 |
| BspANI | GGCC | 3 cut(s) | 179, 266, 473 |
| BspCNI | CTCAG | 1 cut(s) | 212 |
| BspLI | GGNNCC | 3 cut(s) | 58, 80, 112 |
| BspMAI | CTGCAG | 1 cut(s) | 376 |
| BspPI | GGATC | 2 cut(s) | 25, 356 |
| BspQI | GCTCTTC | 1 cut(s) | 152 |
| BspT107I | GGYRCC | 2 cut(s) | 56, 110 |
| BsrBI | CCGCTC | 2 cut(s) | 73, 164 |
| BsrI | ACTGG | 2 cut(s) | 29, 531 |
| BssECI | CCNNGG | 4 cut(s) | 13, 115, 337, 468 |
| BssMI | GATC | 3 cut(s) | 17, 348, 415 |
| BssNI | GRCGYC | 1 cut(s) | 57 |
| BssT1I | CCWWGG | 3 cut(s) | 13, 337, 468 |
| Bst2UI | CCWGG | 1 cut(s) | 484 |
| Bst4CI | ACNGT | 2 cut(s) | 400, 450 |
| Bst6I | CTCTTC | 1 cut(s) | 152 |
| BstACI | GRCGYC | 1 cut(s) | 57 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 380 |
| BstC8I | GCNNGC | 1 cut(s) | 104 |
| BstDEI | CTNAG | 1 cut(s) | 199 |
| BstDSI | CCRYGG | 3 cut(s) | 13, 115, 468 |
| BstF5I | GGATG | 2 cut(s) | 353, 530 |
| BstH2I | RGCGCY | 1 cut(s) | 60 |
| BstHHI | GCGC | 2 cut(s) | 59, 135 |
| BstKTI | GATC | 3 cut(s) | 20, 351, 418 |
| BstMBI | GATC | 3 cut(s) | 17, 348, 415 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 108, 117, 304, 380 |
| BstNI | CCWGG | 1 cut(s) | 484 |
| BstNSI | RCATGY | 1 cut(s) | 106 |
| BstSCI | CCNGG | 4 cut(s) | 75, 97, 106, 482 |
| BstSFI | CTRYAG | 2 cut(s) | 372, 462 |
| BstSLI | GKGCMC | 2 cut(s) | 433, 448 |
| BstV1I | GCAGC | 5 cut(s) | 217, 239, 242, 358, 386 |
| BsuRI | GGCC | 3 cut(s) | 179, 266, 473 |
| BtgI | CCRYGG | 3 cut(s) | 13, 115, 468 |
| BtsCI | GGATG | 2 cut(s) | 353, 530 |
| BtsI | GCAGTG | 1 cut(s) | 248 |
| BtsIMutI | CAGTG | 2 cut(s) | 248, 524 |
| Cac8I | GCNNGC | 1 cut(s) | 104 |
| CaiI | CAGNNNCTG | 1 cut(s) | 233 |
| CfoI | GCGC | 2 cut(s) | 59, 135 |
| Cfr13I | GGNCC | 2 cut(s) | 79, 91 |
| Csp6I | GTAC | 1 cut(s) | 41 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 422, 457 |
| CviAII | CATG | 4 cut(s) | 14, 103, 175, 469 |
| CviQI | GTAC | 1 cut(s) | 41 |
| DdeI | CTNAG | 1 cut(s) | 199 |
| DinI | GGCGCC | 1 cut(s) | 58 |
| DpnI | GATC | 3 cut(s) | 19, 350, 417 |
| DpnII | GATC | 3 cut(s) | 17, 348, 415 |
| EaeI | YGGCCR | 2 cut(s) | 177, 264 |
| Eam1104I | CTCTTC | 1 cut(s) | 152 |
| EarI | CTCTTC | 1 cut(s) | 152 |
| EciI | GGCGGA | 2 cut(s) | 145, 313 |
| Eco130I | CCWWGG | 3 cut(s) | 13, 337, 468 |
| Eco47I | GGWCC | 2 cut(s) | 79, 91 |
| EcoO109I | RGGNCCY | 1 cut(s) | 91 |
| EcoRII | CCWGG | 1 cut(s) | 482 |
| EcoT14I | CCWWGG | 3 cut(s) | 13, 337, 468 |
| EgeI | GGCGCC | 1 cut(s) | 58 |
| EheI | GGCGCC | 1 cut(s) | 58 |
| ErhI | CCWWGG | 3 cut(s) | 13, 337, 468 |
| FaeI | CATG | 4 cut(s) | 17, 106, 178, 472 |
| FaiI | YATR | 7 cut(s) | 15, 104, 176, 282, 407, 470, 479 |
| FatI | CATG | 4 cut(s) | 13, 102, 174, 468 |
| FauI | CCCGC | 1 cut(s) | 78 |
| Fnu4HI | GCNGC | 7 cut(s) | 159, 162, 228, 231, 256, 372, 375 |
| FokI | GGATG | 2 cut(s) | 340, 517 |
| Fsp4HI | GCNGC | 7 cut(s) | 159, 162, 228, 231, 256, 372, 375 |
| FspBI | CTAG | 1 cut(s) | 290 |
| GlaI | GCGC | 2 cut(s) | 58, 134 |
| GluI | GCNGC | 7 cut(s) | 159, 162, 228, 231, 256, 372, 375 |
| GsaI | CCCAGC | 1 cut(s) | 145 |
| HaeII | RGCGCY | 1 cut(s) | 60 |
| HaeIII | GGCC | 3 cut(s) | 179, 266, 473 |
| HapII | CCGG | 3 cut(s) | 76, 98, 108 |
| HhaI | GCGC | 2 cut(s) | 59, 135 |
| Hin1I | GRCGYC | 1 cut(s) | 57 |
| Hin1II | CATG | 4 cut(s) | 17, 106, 178, 472 |
| Hin6I | GCGC | 2 cut(s) | 57, 133 |
| HinP1I | GCGC | 2 cut(s) | 57, 133 |
| HincII | GTYRAC | 1 cut(s) | 274 |
| HindII | GTYRAC | 1 cut(s) | 274 |
| HinfI | GANTC | 1 cut(s) | 393 |
| HpaII | CCGG | 3 cut(s) | 76, 98, 108 |
| HphI | GGTGA | 4 cut(s) | 17, 325, 353, 481 |
| Hpy166II | GTNNAC | 4 cut(s) | 25, 274, 446, 489 |
| Hpy188I | TCNGA | 2 cut(s) | 83, 190 |
| Hpy188III | TCNNGA | 3 cut(s) | 419, 511, 534 |
| Hpy8I | GTNNAC | 4 cut(s) | 25, 274, 446, 489 |
| HpyAV | CCTTC | 4 cut(s) | 82, 104, 296, 484 |
| HpyCH4III | ACNGT | 2 cut(s) | 400, 450 |
| HpyCH4IV | ACGT | 3 cut(s) | 6, 276, 365 |
| HpyCH4V | TGCA | 5 cut(s) | 227, 241, 307, 374, 446 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 108, 117, 304, 380 |
| HpyF3I | CTNAG | 1 cut(s) | 199 |
| HpySE526I | ACGT | 3 cut(s) | 6, 276, 365 |
| Hsp92I | GRCGYC | 1 cut(s) | 57 |
| Hsp92II | CATG | 4 cut(s) | 17, 106, 178, 472 |
| HspAI | GCGC | 2 cut(s) | 57, 133 |
| KasI | GGCGCC | 1 cut(s) | 56 |
| Kzo9I | GATC | 3 cut(s) | 17, 348, 415 |
| LguI | GCTCTTC | 1 cut(s) | 152 |
| LmnI | GCTCC | 2 cut(s) | 78, 252 |
| Lsp1109I | GCAGC | 5 cut(s) | 217, 239, 242, 358, 386 |
| MaeI | CTAG | 1 cut(s) | 290 |
| MaeII | ACGT | 3 cut(s) | 6, 276, 365 |
| MaeIII | GTNAC | 2 cut(s) | 202, 522 |
| MalI | GATC | 3 cut(s) | 19, 350, 417 |
| MbiI | CCGCTC | 2 cut(s) | 73, 164 |
| MboI | GATC | 3 cut(s) | 17, 348, 415 |
| MboII | GAAGA | 3 cut(s) | 47, 139, 142 |
| MhlI | GDGCHC | 2 cut(s) | 433, 448 |
| MlsI | TGGCCA | 2 cut(s) | 179, 266 |
| MluCI | AATT | 1 cut(s) | 514 |
| MluNI | TGGCCA | 2 cut(s) | 179, 266 |
| Mly113I | GGCGCC | 1 cut(s) | 57 |
| MnlI | CCTC | 3 cut(s) | 146, 196, 208 |
| Mox20I | TGGCCA | 2 cut(s) | 179, 266 |
| MscI | TGGCCA | 2 cut(s) | 179, 266 |
| MslI | CAYNNNNRTG | 1 cut(s) | 535 |
| Msp20I | TGGCCA | 2 cut(s) | 179, 266 |
| MspA1I | CMGCKG | 1 cut(s) | 230 |
| MspI | CCGG | 3 cut(s) | 76, 98, 108 |
| MspR9I | CCNGG | 4 cut(s) | 77, 99, 108, 484 |
| MvaI | CCWGG | 1 cut(s) | 484 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 108, 117, 304, 380 |
| NarI | GGCGCC | 1 cut(s) | 57 |
| NciI | CCSGG | 3 cut(s) | 77, 99, 108 |
| NcoI | CCATGG | 2 cut(s) | 13, 468 |
| NdeII | GATC | 3 cut(s) | 17, 348, 415 |
| NlaIII | CATG | 4 cut(s) | 17, 106, 178, 472 |
| NlaIV | GGNNCC | 3 cut(s) | 58, 80, 112 |
| NmuCI | GTSAC | 2 cut(s) | 202, 522 |
| NspI | RCATGY | 1 cut(s) | 106 |
| PaeI | GCATGC | 1 cut(s) | 106 |
| PciSI | GCTCTTC | 1 cut(s) | 152 |
| PfeI | GAWTC | 1 cut(s) | 393 |
| PkrI | GCNGC | 7 cut(s) | 160, 163, 229, 232, 257, 373, 376 |
| PluTI | GGCGCC | 1 cut(s) | 60 |
| PpuMI | RGGWCCY | 1 cut(s) | 91 |
| Psp1406I | AACGTT | 1 cut(s) | 365 |
| Psp5II | RGGWCCY | 1 cut(s) | 91 |
| Psp6I | CCWGG | 1 cut(s) | 482 |
| PspFI | CCCAGC | 1 cut(s) | 141 |
| PspGI | CCWGG | 1 cut(s) | 482 |
| PspN4I | GGNNCC | 3 cut(s) | 58, 80, 112 |
| PspPI | GGNCC | 2 cut(s) | 79, 91 |
| PspPPI | RGGWCCY | 1 cut(s) | 91 |
| PstI | CTGCAG | 1 cut(s) | 376 |
| PstNI | CAGNNNCTG | 1 cut(s) | 233 |
| PvuII | CAGCTG | 1 cut(s) | 230 |
| RsaI | GTAC | 1 cut(s) | 42 |
| RsaNI | GTAC | 1 cut(s) | 41 |
| RseI | CAYNNNNRTG | 1 cut(s) | 535 |
| SapI | GCTCTTC | 1 cut(s) | 152 |
| SatI | GCNGC | 7 cut(s) | 159, 162, 228, 231, 256, 372, 375 |
| Sau3AI | GATC | 3 cut(s) | 17, 348, 415 |
| Sau96I | GGNCC | 2 cut(s) | 79, 91 |
| ScrFI | CCNGG | 4 cut(s) | 77, 99, 108, 484 |
| SduI | GDGCHC | 2 cut(s) | 433, 448 |
| SfcI | CTRYAG | 2 cut(s) | 372, 462 |
| SfoI | GGCGCC | 1 cut(s) | 58 |
| SinI | GGWCC | 2 cut(s) | 79, 91 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 535 |
| SphI | GCATGC | 1 cut(s) | 106 |
| Sse9I | AATT | 1 cut(s) | 514 |
| SsiI | CCGC | 8 cut(s) | 71, 120, 156, 159, 162, 298, 387, 492 |
| SspDI | GGCGCC | 1 cut(s) | 56 |
| SspMI | CTAG | 1 cut(s) | 290 |
| StyD4I | CCNGG | 4 cut(s) | 75, 97, 106, 482 |
| StyI | CCWWGG | 3 cut(s) | 13, 337, 468 |
| TaaI | ACNGT | 2 cut(s) | 400, 450 |
| TaiI | ACGT | 3 cut(s) | 9, 279, 368 |
| TaqI | TCGA | 1 cut(s) | 316 |
| TasI | AATT | 1 cut(s) | 514 |
| TauI | GCSGC | 2 cut(s) | 161, 164 |
| TfiI | GAWTC | 1 cut(s) | 393 |
| TscAI | CASTG | 2 cut(s) | 248, 531 |
| TseFI | GTSAC | 2 cut(s) | 202, 522 |
| TseI | GCWGC | 5 cut(s) | 227, 230, 255, 371, 374 |
| Tsp45I | GTSAC | 2 cut(s) | 202, 522 |
| TspDTI | ATGAA | 3 cut(s) | 17, 101, 466 |
| TspRI | CASTG | 2 cut(s) | 248, 531 |
| VneI | GTGCAC | 1 cut(s) | 444 |
| VpaK11BI | GGWCC | 2 cut(s) | 79, 91 |
| XapI | RAATTY | 1 cut(s) | 514 |
| XceI | RCATGY | 1 cut(s) | 106 |
| XspI | CTAG | 1 cut(s) | 290 |