Prupe.6G106800_v2.0.a1
TCP Family

Belongs to the chaperonin (HSP60) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
7588686 .. 7592315
3630 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G106800.1

Sequence Viewer

Length: 1758 bp
ATGGCGTCGGCCAACGCTCTTACTTCAGCTGCCATTCTCTGCTCGCCCAGTCAGAGTTTGAGGAGGAGGGTGAATCAGCAGCAAAATAATAGGGTGAATTACAAGCAATCAAGGGGCCGATTTGTTGTGAAGGCCGCTGCAAAAGATATAGCTTTTGACCAGAACTCAAGGCGTGCGCTACAGGCCGGAATTGATAAGCTTGCTGATGCAGTTGGCCTTACTCTTGGCCCTAGGGGGAGGAACGTTGTCTTGGACGAATATGGAAGTCCCAAAGTGGTGAATGATGGAGTAACAATTGCTAGAGCTATTGAGCTTCCTGATGCTATGGAAAATGCTGGTGCAGCTCTCATAAGGGAGGTTGCTAGCAAAACGAACGACTCAGCTGGTGATGGAACAACGACAGCATCAATTCTTGCTCGGGAGATAATCAAGCTTGGACTTTTGAGTGTCACCTCTGGTGCAAATCCTGTTTCAATAAAGAAGGGGATTGATAAAACTGTACACGGTCTGATAGAGGAGCTAGAGAATAAATCTAGGCCTGTTAAGGGTCGTGATGATGTTAAAGCTGTTGCTTCTATTTCTGCTGGGAACGATGAGTATATTGGGACAATGATTGCTGATGCCATCGACAAGGTGGGACCTGATGGTGTCCTATCCATTGAGTCATCATCCTCATTTGAGACAACCGTCGAAGTGGAAGAAGGAATGGAGATTGACAGAGGATATATCTCCCCTCAATTTGTTACGAACCCTGAGAAATTGATTGTTGAATTTGAGAATGCAAGAGTTTTGATTACTGACCAGAAAATTACAGCTATCAAGGACATAATTCCCCTTTTGGAGAAGACCACTCAGTTGAGAGCCCCTCTGCTTATAATTGCTGAGGATGTCTCTGGGGAGGCTTTGGCGACTCTTGTTGTGAACAAGTTGAGGGGCATAATTAATGTTGCTGCCATCAAAGCTCCTGGTTTTGGTGAACGGAGAAAGGCTCTCCTCCAAGATATCGCCATTTTAACAGGAGCTGAGTTTCAAGCCAATGATCTGGGTCTACTGGTGGAGAACACCTCAGTTGAGCAGCTTGGTTTGGCCCGAAAGGTGACAATCTCAAAGGACTCCACTACCATAATTGCTGATGCAGCTTCAAAAGATGAGTTGCAAGCTAGGATTGCACAGCTGAAGAAGGAGTTATCTGAGACAGATTCTGTTTATGACTCGGAAAAATTGGCTGAGCGGATTGCTAAATTATCAGGTGGAGTTGCTGTTATAAAGGTGGGAGCTGCTACAGAGACCGAACTTGAGGACCGTAAGCTTCGTATTGAGGATGCCAAGAATGCCACTTTTGCTGCCATAGAGGAAGGTATTGTGCCTGGTGGTGGTGCCGCCTTGGTGCATCTGTCAACATATGTCCCTGCACTCAAGCAAAAACTTGTAGATGCAGATGAGCAGCTAGGTGCTGACATTGTGCAGAAGGCACTCGTATCACCAGCAGCATTAATAGCTCAAAATGCTGGAATTGAAGGTGAAGTGGTTGTGGAGAAAATAAAGGATAGTGAATGGGAGGTTGGTTACAACGCAATGACAGACAAGTACGAGAACTTGGTGGAAGCCGGTGTTATTGACCCAGCAAAGGTAACAAGATGTGCTTTACAGAATGCAGCTTCGGTTGCCGGAATGGTGTTGACCACTCAAGCCATCGTGGTGGAAAAGCCTAAGCCCAAGTCACCTGCGGCTGCTGCTGCACAAGGTCTTACTGTGTAA

Protein Analysis

586

Amino Acids

61.88

Weight (kDa)

5.14

Isoelectric Point (pI)

33.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016669)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G28000
fragaria_vesca FvH4_3g31450
malus_domestica MD03G1124000.v1.1 MD11G1141000.v1.1
prunus_persica Prupe.6G106800_v2.0.a1
pyrus_communis pycom11g11710
rosa_chinensis RchiOBHm_Chr5g0058151
rosa_laevigata RLG00000035195
rosa_multiflora Rmu_sc0000367.1_g000017
rosa_roxburghii Rroxscaffold_1G00022440
rosa_rugosa Rorug05G0311700
rosa_samantha Rh5AG380000 Rh5CG414900
rosa_wichuraiana Rw5G035760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 875, 1265
AarI CACCTGC 1 cut(s) 1732
Acc36I ACCTGC 1 cut(s) 1732
AccB1I GGYRCC 1 cut(s) 1376
AccBSI CCGCTC 1 cut(s) 1231
AccI GTMKAC 1 cut(s) 1048
AciI CCGC 4 cut(s) 135, 1231, 1380, 1727
AclI AACGTT 1 cut(s) 243
AcoI YGGCCR 1 cut(s) 9
AcsI RAATTY 1 cut(s) 770
AcuI CTGAAG 2 cut(s) 9, 1196
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 2 cut(s) 501, 1589
AfiI CCNNNNNNNGG 4 cut(s) 545, 971, 1373, 1627
AgsI TTSAA 5 cut(s) 474, 770, 1031, 1143, 1517
AjnI CCWGG 2 cut(s) 964, 1366
AjuI GAANNNNNNNTTGG 4 cut(s) 233, 265, 1545, 1577
Alw26I GTCTC 4 cut(s) 674, 895, 1187, 1280
AlwNI CAGNNNCTG 2 cut(s) 1022, 1202
Ama87I CYCGRG 1 cut(s) 417
AoxI GGCC 8 cut(s) 9, 115, 132, 183, 214, 226, 536, 1086
ApoI RAATTY 1 cut(s) 770
AseI ATTAAT 2 cut(s) 942, 1493
AspA2I CCTAGG 1 cut(s) 230
AspLEI GCGC 1 cut(s) 178
AspS9I GGNCC 5 cut(s) 115, 227, 638, 1087, 1300
AsuNHI GCTAGC 1 cut(s) 362
AvaI CYCGRG 1 cut(s) 417
AvaII GGWCC 2 cut(s) 638, 1300
AvrII CCTAGG 1 cut(s) 230
BanI GGYRCC 1 cut(s) 1376
BanII GRGCYC 1 cut(s) 865
BbsI GAAGAC 1 cut(s) 851
BbvCI CCTCAGC 1 cut(s) 882
BccI CCATC 6 cut(s) 278, 383, 632, 638, 962, 1700
BciT130I CCWGG 2 cut(s) 966, 1368
BcoDI GTCTC 4 cut(s) 674, 895, 1187, 1280
BfaI CTAG 7 cut(s) 231, 300, 363, 521, 534, 1161, 1448
BfmI CTRYAG 2 cut(s) 179, 1281
BfuAI ACCTGC 1 cut(s) 1732
BlnI CCTAGG 1 cut(s) 230
BlpI GCTNAGC 1 cut(s) 1227
Bme1390I CCNGG 2 cut(s) 966, 1368
Bme18I GGWCC 2 cut(s) 638, 1300
BmeT110I CYCGRG 1 cut(s) 417
BmgT120I GGNCC 5 cut(s) 115, 227, 638, 1087, 1300
BmiI GGNNCC 3 cut(s) 116, 639, 1378
BmrFI CCNGG 2 cut(s) 966, 1368
BmrI ACTGGG 1 cut(s) 42
BmsI GCATC 8 cut(s) 196, 310, 413, 610, 1123, 1312, 1399, 1423
BmtI GCTAGC 1 cut(s) 366
BmuI ACTGGG 1 cut(s) 42
BoxI GACNNNNGTC 1 cut(s) 686
BpiI GAAGAC 1 cut(s) 851
BplI GAGNNNNNCTC 8 cut(s) 850, 882, 875, 907, 973, 1005, 1049, 1081
Bpu10I CCTNAGC 2 cut(s) 882, 1710
Bpu1102I GCTNAGC 1 cut(s) 1227
BpuEI CTTGAG 4 cut(s) 151, 1316, 1400, 1671
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1280
BsaJI CCNNGG 2 cut(s) 230, 1383
BsaXI ACNNNNNCTCC 2 cut(s) 1245, 1275
Bsc4I CCNNNNNNNGG 4 cut(s) 545, 971, 1373, 1627
Bse118I RCCGGY 1 cut(s) 1607
Bse1I ACTGG 2 cut(s) 48, 1056
Bse3DI GCAATG 1 cut(s) 1581
BseBI CCWGG 2 cut(s) 966, 1368
BseDI CCNNGG 2 cut(s) 230, 1383
BseGI GGATG 3 cut(s) 668, 892, 1327
BseLI CCNNNNNNNGG 4 cut(s) 545, 971, 1373, 1627
BseMI GCAATG 1 cut(s) 1581
BseMII CTCAG 8 cut(s) 393, 744, 866, 873, 1014, 1080, 1182, 1218
BseNI ACTGG 2 cut(s) 48, 1056
BseRI GAGGAG 4 cut(s) 76, 79, 530, 983
BseYI CCCAGC 2 cut(s) 584, 1621
BsgI GTGCAG 4 cut(s) 360, 1395, 1484, 1722
BshFI GGCC 8 cut(s) 11, 117, 134, 185, 216, 228, 538, 1088
BshNI GGYRCC 1 cut(s) 1376
BsiHKCI CYCGRG 1 cut(s) 417
BsiSI CCGG 3 cut(s) 186, 1608, 1668
BslFI GGGAC 4 cut(s) 252, 619, 651, 1391
BslI CCNNNNNNNGG 4 cut(s) 545, 971, 1373, 1627
BsmAI GTCTC 4 cut(s) 674, 895, 1187, 1280
BsmFI GGGAC 4 cut(s) 252, 619, 651, 1391
BsmI GAATGC 3 cut(s) 784, 1336, 1657
BsnI GGCC 8 cut(s) 11, 117, 134, 185, 216, 228, 538, 1088
Bso31I GGTCTC 1 cut(s) 1280
BsoBI CYCGRG 1 cut(s) 417
Bsp1286I GDGCHC 1 cut(s) 865
Bsp1407I TGTACA 1 cut(s) 499
Bsp143I GATC 1 cut(s) 1039
Bsp1720I GCTNAGC 1 cut(s) 1227
BspACI CCGC 4 cut(s) 135, 1231, 1380, 1727
BspANI GGCC 8 cut(s) 11, 117, 134, 185, 216, 228, 538, 1088
BspCNI CTCAG 8 cut(s) 392, 745, 865, 874, 1015, 1079, 1183, 1219
BspLI GGNNCC 3 cut(s) 116, 639, 1378
BspMI ACCTGC 1 cut(s) 1732
BspOI GCTAGC 1 cut(s) 366
BspT107I GGYRCC 1 cut(s) 1376
BspTNI GGTCTC 1 cut(s) 1280
BsrBI CCGCTC 1 cut(s) 1231
BsrDI GCAATG 1 cut(s) 1581
BsrFI RCCGGY 1 cut(s) 1607
BsrGI TGTACA 1 cut(s) 499
BsrI ACTGG 2 cut(s) 48, 1056
BssAI RCCGGY 1 cut(s) 1607
BssECI CCNNGG 2 cut(s) 230, 1383
BssMI GATC 1 cut(s) 1039
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 230, 1383
Bst2UI CCWGG 2 cut(s) 966, 1368
Bst4CI ACNGT 5 cut(s) 499, 506, 688, 1304, 1753
BstACI GRCGYC 1 cut(s) 5
BstAUI TGTACA 1 cut(s) 499
BstC8I GCNNGC 5 cut(s) 44, 174, 201, 364, 1158
BstDEI CTNAG 9 cut(s) 379, 753, 852, 882, 1023, 1066, 1191, 1227, 1710
BstF5I GGATG 3 cut(s) 668, 892, 1327
BstHHI GCGC 1 cut(s) 178
BstKTI GATC 1 cut(s) 1042
BstMAI GTCTC 4 cut(s) 674, 895, 1187, 1280
BstMBI GATC 1 cut(s) 1039
BstNI CCWGG 2 cut(s) 966, 1368
BstPAI GACNNNNGTC 1 cut(s) 686
BstSCI CCNGG 2 cut(s) 964, 1366
BstSFI CTRYAG 2 cut(s) 179, 1281
BstV2I GAAGAC 1 cut(s) 851
BstXI CCANNNNNNTGG 2 cut(s) 1042, 1699
BsuRI GGCC 8 cut(s) 11, 117, 134, 185, 216, 228, 538, 1088
BtsCI GGATG 3 cut(s) 668, 892, 1327
BveI ACCTGC 1 cut(s) 1732
Cac8I GCNNGC 5 cut(s) 44, 174, 201, 364, 1158
CaiI CAGNNNCTG 2 cut(s) 1022, 1202
CfoI GCGC 1 cut(s) 178
Cfr10I RCCGGY 1 cut(s) 1607
Cfr13I GGNCC 5 cut(s) 115, 227, 638, 1087, 1300
Csp6I GTAC 2 cut(s) 500, 1588
CviQI GTAC 2 cut(s) 500, 1588
DdeI CTNAG 9 cut(s) 379, 753, 852, 882, 1023, 1066, 1191, 1227, 1710
DpnI GATC 1 cut(s) 1041
DpnII GATC 1 cut(s) 1039
EaeI YGGCCR 1 cut(s) 9
Eco130I CCWWGG 2 cut(s) 230, 1383
Eco147I AGGCCT 1 cut(s) 538
Eco24I GRGCYC 1 cut(s) 865
Eco31I GGTCTC 1 cut(s) 1280
Eco32I GATATC 1 cut(s) 1003
Eco47I GGWCC 2 cut(s) 638, 1300
Eco57I CTGAAG 2 cut(s) 9, 1196
Eco88I CYCGRG 1 cut(s) 417
EcoO109I RGGNCCY 1 cut(s) 638
EcoRII CCWGG 2 cut(s) 964, 1366
EcoRV GATATC 1 cut(s) 1003
EcoT14I CCWWGG 2 cut(s) 230, 1383
EcoT38I GRGCYC 1 cut(s) 865
ErhI CCWWGG 2 cut(s) 230, 1383
FalI AAGNNNNNCTT 2 cut(s) 1627, 1659
FaqI GGGAC 4 cut(s) 252, 619, 651, 1391
FauNDI CATATG 1 cut(s) 1402
FblI GTMKAC 1 cut(s) 1048
FokI GGATG 3 cut(s) 655, 899, 1334
FriOI GRGCYC 1 cut(s) 865
FspBI CTAG 7 cut(s) 231, 300, 363, 521, 534, 1161, 1448
GlaI GCGC 1 cut(s) 177
GsaI CCCAGC 2 cut(s) 588, 1625
HaeIII GGCC 8 cut(s) 11, 117, 134, 185, 216, 228, 538, 1088
HapII CCGG 3 cut(s) 186, 1608, 1668
HhaI GCGC 1 cut(s) 178
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 1 cut(s) 176
HinP1I GCGC 1 cut(s) 176
HincII GTYRAC 2 cut(s) 1398, 1680
HindII GTYRAC 2 cut(s) 1398, 1680
HindIII AAGCTT 3 cut(s) 197, 431, 1307
HinfI GANTC 7 cut(s) 73, 377, 662, 910, 1112, 1199, 1211
HpaII CCGG 3 cut(s) 186, 1608, 1668
Hpy166II GTNNAC 6 cut(s) 502, 922, 977, 1049, 1398, 1680
Hpy188I TCNGA 4 cut(s) 54, 510, 1192, 1216
Hpy188III TCNNGA 3 cut(s) 317, 419, 551
Hpy8I GTNNAC 6 cut(s) 502, 922, 977, 1049, 1398, 1680
Hpy99I CGWCG 2 cut(s) 10, 692
HpyAV CCTTC 7 cut(s) 124, 475, 695, 1174, 1349, 1462, 1511
HpyCH4III ACNGT 5 cut(s) 499, 506, 688, 1304, 1753
HpyCH4IV ACGT 1 cut(s) 243
HpyF3I CTNAG 9 cut(s) 379, 753, 852, 882, 1023, 1066, 1191, 1227, 1710
HpySE526I ACGT 1 cut(s) 243
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 1 cut(s) 176
Kzo9I GATC 1 cut(s) 1039
LmnI GCTCC 4 cut(s) 517, 967, 1019, 1274
LweI GCATC 8 cut(s) 196, 310, 413, 610, 1123, 1312, 1399, 1423
MaeI CTAG 7 cut(s) 231, 300, 363, 521, 534, 1161, 1448
MaeII ACGT 1 cut(s) 243
MaeIII GTNAC 7 cut(s) 289, 448, 742, 1096, 1565, 1630, 1719
MalI GATC 1 cut(s) 1041
MbiI CCGCTC 1 cut(s) 1231
MboI GATC 1 cut(s) 1039
MboII GAAGA 3 cut(s) 710, 856, 1189
MfeI CAATTG 1 cut(s) 294
MhlI GDGCHC 1 cut(s) 865
MlyI GAGTC 5 cut(s) 371, 671, 904, 1106, 1205
MseI TTAA 5 cut(s) 543, 561, 942, 1013, 1493
MslI CAYNNNNRTG 1 cut(s) 1697
MspA1I CMGCKG 4 cut(s) 29, 137, 383, 1174
MspI CCGG 3 cut(s) 186, 1608, 1668
MspR9I CCNGG 2 cut(s) 966, 1368
MunI CAATTG 1 cut(s) 294
Mva1269I GAATGC 3 cut(s) 784, 1336, 1657
MvaI CCWGG 2 cut(s) 966, 1368
NdeI CATATG 1 cut(s) 1402
NdeII GATC 1 cut(s) 1039
NheI GCTAGC 1 cut(s) 362
NlaIV GGNNCC 3 cut(s) 116, 639, 1378
NmuCI GTSAC 3 cut(s) 448, 1096, 1719
PaqCI CACCTGC 1 cut(s) 1732
PceI AGGCCT 1 cut(s) 538
PctI GAATGC 3 cut(s) 784, 1336, 1657
PfeI GAWTC 2 cut(s) 73, 1199
PleI GAGTC 5 cut(s) 371, 670, 904, 1106, 1205
PpsI GAGTC 5 cut(s) 371, 670, 904, 1106, 1205
PpuMI RGGWCCY 1 cut(s) 638
PshAI GACNNNNGTC 1 cut(s) 686
PshBI ATTAAT 2 cut(s) 942, 1493
PsiI TTATAA 2 cut(s) 875, 1265
Psp1406I AACGTT 1 cut(s) 243
Psp5II RGGWCCY 1 cut(s) 638
Psp6I CCWGG 2 cut(s) 964, 1366
PspFI CCCAGC 2 cut(s) 584, 1621
PspGI CCWGG 2 cut(s) 964, 1366
PspN4I GGNNCC 3 cut(s) 116, 639, 1378
PspPI GGNCC 5 cut(s) 115, 227, 638, 1087, 1300
PspPPI RGGWCCY 1 cut(s) 638
PstNI CAGNNNCTG 2 cut(s) 1022, 1202
PvuII CAGCTG 3 cut(s) 29, 383, 1174
RsaI GTAC 2 cut(s) 501, 1589
RsaNI GTAC 2 cut(s) 500, 1588
RseI CAYNNNNRTG 1 cut(s) 1697
SaqAI TTAA 5 cut(s) 543, 561, 942, 1013, 1493
Sau3AI GATC 1 cut(s) 1039
Sau96I GGNCC 5 cut(s) 115, 227, 638, 1087, 1300
SchI GAGTC 5 cut(s) 371, 671, 904, 1106, 1205
ScrFI CCNGG 2 cut(s) 966, 1368
SduI GDGCHC 1 cut(s) 865
SfaNI GCATC 8 cut(s) 196, 310, 413, 610, 1123, 1312, 1399, 1423
SfcI CTRYAG 2 cut(s) 179, 1281
SinI GGWCC 2 cut(s) 638, 1300
SmiMI CAYNNNNRTG 1 cut(s) 1697
SmlI CTYRAG 4 cut(s) 166, 1295, 1415, 1686
SmoI CTYRAG 4 cut(s) 166, 1295, 1415, 1686
SseBI AGGCCT 1 cut(s) 538
SsiI CCGC 4 cut(s) 135, 1231, 1380, 1727
SspMI CTAG 7 cut(s) 231, 300, 363, 521, 534, 1161, 1448
StuI AGGCCT 1 cut(s) 538
StyD4I CCNGG 2 cut(s) 964, 1366
StyI CCWWGG 2 cut(s) 230, 1383
TaaI ACNGT 5 cut(s) 499, 506, 688, 1304, 1753
TaiI ACGT 1 cut(s) 246
TaqI TCGA 2 cut(s) 627, 690
TaqII GACCGA 1 cut(s) 1304
TatI WGTACW 1 cut(s) 499
TauI GCSGC 3 cut(s) 137, 1382, 1730
TfiI GAWTC 2 cut(s) 73, 1199
Tru1I TTAA 5 cut(s) 543, 561, 942, 1013, 1493
Tru9I TTAA 5 cut(s) 543, 561, 942, 1013, 1493
TseFI GTSAC 3 cut(s) 448, 1096, 1719
Tsp45I GTSAC 3 cut(s) 448, 1096, 1719
TspGWI ACGGA 1 cut(s) 994
VpaK11BI GGWCC 2 cut(s) 638, 1300
VspI ATTAAT 2 cut(s) 942, 1493
XapI RAATTY 1 cut(s) 770
XcmI CCANNNNNNNNNTGG 1 cut(s) 631
XmaJI CCTAGG 1 cut(s) 230
XmiI GTMKAC 1 cut(s) 1048
XspI CTAG 7 cut(s) 231, 300, 363, 521, 534, 1161, 1448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.