RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g26340 |
| malus_domestica | MD03G1156000.v1.1 MD11G1173600.v1.1 |
| prunus_persica | Prupe.6G145300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0048581 |
| rosa_laevigata | RLG00000034537 |
| rosa_multiflora | Rmu_sc0007341.1_g000023 |
| rosa_roxburghii | Rroxscaffold_1G00033250 |
| rosa_rugosa | Rorug05G0239700 |
| rosa_samantha | Rh5AG319300 Rh5BG329700 Rh5DG340900 |
| rosa_wichuraiana | Rw0G021250 Rw5G029860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1164 |
| AccBSI | CCGCTC | 2 cut(s) | 253, 277 |
| AccII | CGCG | 1 cut(s) | 996 |
| AccIII | TCCGGA | 1 cut(s) | 348 |
| AciI | CCGC | 8 cut(s) | 202, 205, 253, 275, 743, 807, 935, 994 |
| AclWI | GGATC | 7 cut(s) | 56, 92, 354, 455, 647, 894, 958 |
| AcoI | YGGCCR | 1 cut(s) | 1077 |
| AcsI | RAATTY | 3 cut(s) | 587, 595, 1171 |
| AcuI | CTGAAG | 1 cut(s) | 1034 |
| AcvI | CACGTG | 1 cut(s) | 982 |
| AcyI | GRCGYC | 1 cut(s) | 246 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 829, 1164 |
| AflIII | ACRYGT | 1 cut(s) | 703 |
| AgsI | TTSAA | 8 cut(s) | 488, 586, 592, 631, 643, 751, 928, 1100 |
| AjnI | CCWGG | 1 cut(s) | 1186 |
| Alw21I | GWGCWC | 3 cut(s) | 227, 613, 768 |
| Alw26I | GTCTC | 2 cut(s) | 276, 836 |
| Alw44I | GTGCAC | 1 cut(s) | 223 |
| AlwI | GGATC | 7 cut(s) | 56, 92, 354, 455, 647, 894, 958 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 818 |
| Ama87I | CYCGRG | 1 cut(s) | 606 |
| Aor13HI | TCCGGA | 1 cut(s) | 348 |
| AoxI | GGCC | 3 cut(s) | 429, 520, 1077 |
| ApaLI | GTGCAC | 1 cut(s) | 223 |
| ApeKI | GCWGC | 2 cut(s) | 396, 407 |
| ApoI | RAATTY | 3 cut(s) | 587, 595, 1171 |
| AspLEI | GCGC | 3 cut(s) | 674, 812, 998 |
| AspS9I | GGNCC | 1 cut(s) | 387 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| AsuNHI | GCTAGC | 1 cut(s) | 943 |
| AvaI | CYCGRG | 1 cut(s) | 606 |
| AvaII | GGWCC | 1 cut(s) | 387 |
| AxyI | CCTNAGG | 1 cut(s) | 968 |
| BaeGI | GKGCMC | 1 cut(s) | 227 |
| BalI | TGGCCA | 1 cut(s) | 1079 |
| BanII | GRGCYC | 2 cut(s) | 613, 768 |
| BauI | CACGAG | 1 cut(s) | 692 |
| BbrPI | CACGTG | 1 cut(s) | 982 |
| Bbv12I | GWGCWC | 3 cut(s) | 227, 613, 768 |
| BbvI | GCAGC | 2 cut(s) | 383, 394 |
| BccI | CCATC | 6 cut(s) | 80, 108, 472, 539, 1025, 1219 |
| BceAI | ACGGC | 2 cut(s) | 187, 782 |
| BciT130I | CCWGG | 1 cut(s) | 1188 |
| BciVI | GTATCC | 1 cut(s) | 249 |
| BcoDI | GTCTC | 2 cut(s) | 276, 836 |
| BfaI | CTAG | 1 cut(s) | 944 |
| BfmI | CTRYAG | 2 cut(s) | 408, 1021 |
| BfoI | RGCGCY | 1 cut(s) | 675 |
| BfuI | GTATCC | 1 cut(s) | 249 |
| BglII | AGATCT | 2 cut(s) | 178, 529 |
| BisI | GCNGC | 6 cut(s) | 205, 397, 408, 744, 808, 936 |
| BlsI | GCNGC | 6 cut(s) | 206, 398, 409, 745, 809, 937 |
| Bme1390I | CCNGG | 1 cut(s) | 1188 |
| Bme18I | GGWCC | 1 cut(s) | 387 |
| BmeT110I | CYCGRG | 1 cut(s) | 606 |
| BmgT120I | GGNCC | 1 cut(s) | 387 |
| BmiI | GGNNCC | 1 cut(s) | 450 |
| BmrFI | CCNGG | 1 cut(s) | 1188 |
| BmsI | GCATC | 1 cut(s) | 114 |
| BmtI | GCTAGC | 1 cut(s) | 947 |
| BpmI | CTGGAG | 1 cut(s) | 1141 |
| BpuEI | CTTGAG | 1 cut(s) | 860 |
| BsaAI | YACGTR | 2 cut(s) | 427, 982 |
| BsaBI | GATNNNNATC | 1 cut(s) | 875 |
| BsaHI | GRCGYC | 1 cut(s) | 246 |
| BsaJI | CCNNGG | 5 cut(s) | 675, 738, 773, 798, 1122 |
| BsaWI | WCCGGW | 1 cut(s) | 348 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 829, 1164 |
| Bse1I | ACTGG | 1 cut(s) | 661 |
| Bse21I | CCTNAGG | 1 cut(s) | 968 |
| Bse3DI | GCAATG | 2 cut(s) | 340, 363 |
| Bse8I | GATNNNNATC | 1 cut(s) | 875 |
| BseAI | TCCGGA | 1 cut(s) | 348 |
| BseBI | CCWGG | 1 cut(s) | 1188 |
| BseDI | CCNNGG | 5 cut(s) | 675, 738, 773, 798, 1122 |
| BseGI | GGATG | 2 cut(s) | 718, 905 |
| BseJI | GATNNNNATC | 1 cut(s) | 875 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 829, 1164 |
| BseMI | GCAATG | 2 cut(s) | 340, 363 |
| BseMII | CTCAG | 2 cut(s) | 138, 370 |
| BseNI | ACTGG | 1 cut(s) | 661 |
| BseSI | GKGCMC | 1 cut(s) | 227 |
| BseXI | GCAGC | 2 cut(s) | 383, 394 |
| BseYI | CCCAGC | 1 cut(s) | 938 |
| BsgI | GTGCAG | 1 cut(s) | 924 |
| Bsh1236I | CGCG | 1 cut(s) | 996 |
| Bsh1285I | CGRYCG | 1 cut(s) | 97 |
| BshFI | GGCC | 3 cut(s) | 431, 522, 1079 |
| BsiEI | CGRYCG | 1 cut(s) | 97 |
| BsiHKAI | GWGCWC | 3 cut(s) | 227, 613, 768 |
| BsiHKCI | CYCGRG | 1 cut(s) | 606 |
| BsiSI | CCGG | 1 cut(s) | 349 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 829, 1164 |
| BsmAI | GTCTC | 2 cut(s) | 276, 836 |
| BsmI | GAATGC | 1 cut(s) | 1182 |
| BsnI | GGCC | 3 cut(s) | 431, 522, 1079 |
| BsoBI | CYCGRG | 1 cut(s) | 606 |
| Bsp1286I | GDGCHC | 3 cut(s) | 227, 613, 768 |
| Bsp13I | TCCGGA | 1 cut(s) | 348 |
| Bsp19I | CCATGG | 1 cut(s) | 773 |
| BspACI | CCGC | 8 cut(s) | 202, 205, 253, 275, 743, 807, 935, 994 |
| BspANI | GGCC | 3 cut(s) | 431, 522, 1079 |
| BspCNI | CTCAG | 2 cut(s) | 137, 369 |
| BspEI | TCCGGA | 1 cut(s) | 348 |
| BspFNI | CGCG | 1 cut(s) | 996 |
| BspHI | TCATGA | 2 cut(s) | 54, 1223 |
| BspLI | GGNNCC | 1 cut(s) | 450 |
| BspMAI | CTGCAG | 1 cut(s) | 412 |
| BspOI | GCTAGC | 1 cut(s) | 947 |
| BspPI | GGATC | 7 cut(s) | 56, 92, 354, 455, 647, 894, 958 |
| BspQI | GCTCTTC | 1 cut(s) | 840 |
| BsrBI | CCGCTC | 2 cut(s) | 253, 277 |
| BsrDI | GCAATG | 2 cut(s) | 340, 363 |
| BsrI | ACTGG | 1 cut(s) | 661 |
| BssECI | CCNNGG | 5 cut(s) | 675, 738, 773, 798, 1122 |
| BssNI | GRCGYC | 1 cut(s) | 246 |
| BssSI | CACGAG | 1 cut(s) | 692 |
| BssT1I | CCWWGG | 4 cut(s) | 675, 738, 773, 1122 |
| Bst2BI | CACGAG | 1 cut(s) | 692 |
| Bst2UI | CCWGG | 1 cut(s) | 1188 |
| Bst6I | CTCTTC | 1 cut(s) | 840 |
| BstACI | GRCGYC | 1 cut(s) | 246 |
| BstBAI | YACGTR | 2 cut(s) | 427, 982 |
| BstC8I | GCNNGC | 5 cut(s) | 142, 520, 915, 933, 945 |
| BstDEI | CTNAG | 3 cut(s) | 124, 356, 968 |
| BstDSI | CCRYGG | 2 cut(s) | 773, 798 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 827 |
| BstF5I | GGATG | 2 cut(s) | 718, 905 |
| BstFNI | CGCG | 1 cut(s) | 996 |
| BstH2I | RGCGCY | 1 cut(s) | 675 |
| BstHHI | GCGC | 3 cut(s) | 674, 812, 998 |
| BstMAI | GTCTC | 2 cut(s) | 276, 836 |
| BstMCI | CGRYCG | 1 cut(s) | 97 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 413, 546, 740, 944 |
| BstNI | CCWGG | 1 cut(s) | 1188 |
| BstNSI | RCATGY | 2 cut(s) | 707, 935 |
| BstSCI | CCNGG | 1 cut(s) | 1186 |
| BstSFI | CTRYAG | 2 cut(s) | 408, 1021 |
| BstSLI | GKGCMC | 1 cut(s) | 227 |
| BstUI | CGCG | 1 cut(s) | 996 |
| BstV1I | GCAGC | 2 cut(s) | 383, 394 |
| BstX2I | RGATCY | 6 cut(s) | 61, 178, 359, 529, 652, 963 |
| BstYI | RGATCY | 6 cut(s) | 61, 178, 359, 529, 652, 963 |
| Bsu36I | CCTNAGG | 1 cut(s) | 968 |
| BsuI | GTATCC | 1 cut(s) | 249 |
| BsuRI | GGCC | 3 cut(s) | 431, 522, 1079 |
| BtgI | CCRYGG | 2 cut(s) | 773, 798 |
| BtsCI | GGATG | 2 cut(s) | 718, 905 |
| BtsI | GCAGTG | 1 cut(s) | 1005 |
| BtsIMutI | CAGTG | 1 cut(s) | 1005 |
| Cac8I | GCNNGC | 5 cut(s) | 142, 520, 915, 933, 945 |
| CaiI | CAGNNNCTG | 1 cut(s) | 818 |
| CciI | TCATGA | 2 cut(s) | 54, 1223 |
| CfoI | GCGC | 3 cut(s) | 674, 812, 998 |
| Cfr13I | GGNCC | 1 cut(s) | 387 |
| CseI | GACGC | 2 cut(s) | 235, 723 |
| CviAII | CATG | 7 cut(s) | 55, 704, 774, 848, 932, 1179, 1224 |
| DdeI | CTNAG | 3 cut(s) | 124, 356, 968 |
| EaeI | YGGCCR | 1 cut(s) | 1077 |
| Eam1104I | CTCTTC | 1 cut(s) | 840 |
| EarI | CTCTTC | 1 cut(s) | 840 |
| EciI | GGCGGA | 1 cut(s) | 191 |
| Ecl136II | GAGCTC | 2 cut(s) | 611, 766 |
| Eco130I | CCWWGG | 4 cut(s) | 675, 738, 773, 1122 |
| Eco24I | GRGCYC | 2 cut(s) | 613, 768 |
| Eco47I | GGWCC | 1 cut(s) | 387 |
| Eco53kI | GAGCTC | 2 cut(s) | 611, 766 |
| Eco57I | CTGAAG | 1 cut(s) | 1034 |
| Eco72I | CACGTG | 1 cut(s) | 982 |
| Eco81I | CCTNAGG | 1 cut(s) | 968 |
| Eco88I | CYCGRG | 1 cut(s) | 606 |
| EcoICRI | GAGCTC | 2 cut(s) | 611, 766 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 827 |
| EcoRI | GAATTC | 1 cut(s) | 1171 |
| EcoRII | CCWGG | 1 cut(s) | 1186 |
| EcoT14I | CCWWGG | 4 cut(s) | 675, 738, 773, 1122 |
| EcoT22I | ATGCAT | 1 cut(s) | 1184 |
| EcoT38I | GRGCYC | 2 cut(s) | 613, 768 |
| ErhI | CCWWGG | 4 cut(s) | 675, 738, 773, 1122 |
| FaeI | CATG | 7 cut(s) | 58, 707, 777, 851, 935, 1182, 1227 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 383, 415 |
| FatI | CATG | 7 cut(s) | 54, 703, 773, 847, 931, 1178, 1223 |
| Fnu4HI | GCNGC | 6 cut(s) | 205, 397, 408, 744, 808, 936 |
| FokI | GGATG | 2 cut(s) | 725, 912 |
| FriOI | GRGCYC | 2 cut(s) | 613, 768 |
| Fsp4HI | GCNGC | 6 cut(s) | 205, 397, 408, 744, 808, 936 |
| FspBI | CTAG | 1 cut(s) | 944 |
| GlaI | GCGC | 3 cut(s) | 673, 811, 997 |
| GluI | GCNGC | 6 cut(s) | 205, 397, 408, 744, 808, 936 |
| GsaI | CCCAGC | 1 cut(s) | 942 |
| GsuI | CTGGAG | 1 cut(s) | 1141 |
| HaeII | RGCGCY | 1 cut(s) | 675 |
| HaeIII | GGCC | 3 cut(s) | 431, 522, 1079 |
| HapII | CCGG | 1 cut(s) | 349 |
| HgaI | GACGC | 2 cut(s) | 235, 723 |
| HhaI | GCGC | 3 cut(s) | 674, 812, 998 |
| Hin1I | GRCGYC | 1 cut(s) | 246 |
| Hin1II | CATG | 7 cut(s) | 58, 707, 777, 851, 935, 1182, 1227 |
| Hin6I | GCGC | 3 cut(s) | 672, 810, 996 |
| HinP1I | GCGC | 3 cut(s) | 672, 810, 996 |
| HindIII | AAGCTT | 2 cut(s) | 216, 752 |
| HinfI | GANTC | 2 cut(s) | 566, 789 |
| HpaII | CCGG | 1 cut(s) | 349 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy166II | GTNNAC | 1 cut(s) | 225 |
| Hpy188I | TCNGA | 5 cut(s) | 359, 457, 504, 514, 720 |
| Hpy8I | GTNNAC | 1 cut(s) | 225 |
| Hpy99I | CGWCG | 2 cut(s) | 173, 251 |
| HpyAV | CCTTC | 4 cut(s) | 30, 797, 902, 1123 |
| HpyCH4IV | ACGT | 2 cut(s) | 426, 981 |
| HpyCH4V | TGCA | 7 cut(s) | 225, 410, 905, 1034, 1063, 1153, 1182 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 413, 546, 740, 944 |
| HpyF3I | CTNAG | 3 cut(s) | 124, 356, 968 |
| HpySE526I | ACGT | 2 cut(s) | 426, 981 |
| Hsp92I | GRCGYC | 1 cut(s) | 246 |
| Hsp92II | CATG | 7 cut(s) | 58, 707, 777, 851, 935, 1182, 1227 |
| HspAI | GCGC | 3 cut(s) | 672, 810, 996 |
| Kpn2I | TCCGGA | 1 cut(s) | 348 |
| LguI | GCTCTTC | 1 cut(s) | 840 |
| LmnI | GCTCC | 3 cut(s) | 413, 454, 763 |
| Lsp1109I | GCAGC | 2 cut(s) | 383, 394 |
| LweI | GCATC | 1 cut(s) | 114 |
| MaeI | CTAG | 1 cut(s) | 944 |
| MaeII | ACGT | 2 cut(s) | 426, 981 |
| MaeIII | GTNAC | 3 cut(s) | 67, 148, 989 |
| MbiI | CCGCTC | 2 cut(s) | 253, 277 |
| MboII | GAAGA | 9 cut(s) | 491, 792, 827, 973, 1040, 1167, 1180, 1206, 1212 |
| MflI | RGATCY | 6 cut(s) | 61, 178, 359, 529, 652, 963 |
| MhlI | GDGCHC | 3 cut(s) | 227, 613, 768 |
| MlsI | TGGCCA | 1 cut(s) | 1079 |
| MluCI | AATT | 8 cut(s) | 39, 320, 587, 595, 621, 920, 1148, 1171 |
| MluNI | TGGCCA | 1 cut(s) | 1079 |
| MlyI | GAGTC | 1 cut(s) | 575 |
| Mox20I | TGGCCA | 1 cut(s) | 1079 |
| Mph1103I | ATGCAT | 1 cut(s) | 1184 |
| MroI | TCCGGA | 1 cut(s) | 348 |
| MscI | TGGCCA | 1 cut(s) | 1079 |
| MseI | TTAA | 2 cut(s) | 297, 1116 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1222 |
| Msp20I | TGGCCA | 1 cut(s) | 1079 |
| MspI | CCGG | 1 cut(s) | 349 |
| MspR9I | CCNGG | 1 cut(s) | 1188 |
| Mva1269I | GAATGC | 1 cut(s) | 1182 |
| MvaI | CCWGG | 1 cut(s) | 1188 |
| MvnI | CGCG | 1 cut(s) | 996 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 413, 546, 740, 944 |
| NcoI | CCATGG | 1 cut(s) | 773 |
| NheI | GCTAGC | 1 cut(s) | 943 |
| NlaIII | CATG | 7 cut(s) | 58, 707, 777, 851, 935, 1182, 1227 |
| NlaIV | GGNNCC | 1 cut(s) | 450 |
| NmuCI | GTSAC | 3 cut(s) | 67, 148, 989 |
| NsiI | ATGCAT | 1 cut(s) | 1184 |
| NspI | RCATGY | 2 cut(s) | 707, 935 |
| PaeI | GCATGC | 1 cut(s) | 935 |
| PaeR7I | CTCGAG | 1 cut(s) | 606 |
| PagI | TCATGA | 2 cut(s) | 54, 1223 |
| PciI | ACATGT | 1 cut(s) | 703 |
| PciSI | GCTCTTC | 1 cut(s) | 840 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 983 |
| PctI | GAATGC | 1 cut(s) | 1182 |
| PfeI | GAWTC | 1 cut(s) | 789 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1164 |
| PkrI | GCNGC | 6 cut(s) | 206, 398, 409, 745, 809, 937 |
| Ple19I | CGATCG | 1 cut(s) | 97 |
| PleI | GAGTC | 1 cut(s) | 574 |
| PmaCI | CACGTG | 1 cut(s) | 982 |
| PmlI | CACGTG | 1 cut(s) | 982 |
| PpsI | GAGTC | 1 cut(s) | 574 |
| Ppu21I | YACGTR | 2 cut(s) | 427, 982 |
| PscI | ACATGT | 1 cut(s) | 703 |
| Psp124BI | GAGCTC | 2 cut(s) | 613, 768 |
| Psp6I | CCWGG | 1 cut(s) | 1186 |
| PspCI | CACGTG | 1 cut(s) | 982 |
| PspFI | CCCAGC | 1 cut(s) | 938 |
| PspGI | CCWGG | 1 cut(s) | 1186 |
| PspN4I | GGNNCC | 1 cut(s) | 450 |
| PspPI | GGNCC | 1 cut(s) | 387 |
| PstI | CTGCAG | 1 cut(s) | 412 |
| PstNI | CAGNNNCTG | 1 cut(s) | 818 |
| PsuI | RGATCY | 6 cut(s) | 61, 178, 359, 529, 652, 963 |
| PvuI | CGATCG | 1 cut(s) | 97 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1222 |
| SacI | GAGCTC | 2 cut(s) | 613, 768 |
| SapI | GCTCTTC | 1 cut(s) | 840 |
| SaqAI | TTAA | 2 cut(s) | 297, 1116 |
| SatI | GCNGC | 6 cut(s) | 205, 397, 408, 744, 808, 936 |
| Sau96I | GGNCC | 1 cut(s) | 387 |
| SchI | GAGTC | 1 cut(s) | 575 |
| ScrFI | CCNGG | 1 cut(s) | 1188 |
| SduI | GDGCHC | 3 cut(s) | 227, 613, 768 |
| SfaNI | GCATC | 1 cut(s) | 114 |
| SfcI | CTRYAG | 2 cut(s) | 408, 1021 |
| Sfr274I | CTCGAG | 1 cut(s) | 606 |
| SinI | GGWCC | 1 cut(s) | 387 |
| SlaI | CTCGAG | 1 cut(s) | 606 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1222 |
| SmlI | CTYRAG | 2 cut(s) | 606, 839 |
| SmoI | CTYRAG | 2 cut(s) | 606, 839 |
| SphI | GCATGC | 1 cut(s) | 935 |
| Sse9I | AATT | 8 cut(s) | 39, 320, 587, 595, 621, 920, 1148, 1171 |
| SsiI | CCGC | 8 cut(s) | 202, 205, 253, 275, 743, 807, 935, 994 |
| SspMI | CTAG | 1 cut(s) | 944 |
| SstI | GAGCTC | 2 cut(s) | 613, 768 |
| StyD4I | CCNGG | 1 cut(s) | 1186 |
| StyI | CCWWGG | 4 cut(s) | 675, 738, 773, 1122 |
| TaiI | ACGT | 2 cut(s) | 429, 984 |
| TasI | AATT | 8 cut(s) | 39, 320, 587, 595, 621, 920, 1148, 1171 |
| TauI | GCSGC | 4 cut(s) | 207, 746, 810, 938 |
| TfiI | GAWTC | 1 cut(s) | 789 |
| Tru1I | TTAA | 2 cut(s) | 297, 1116 |
| Tru9I | TTAA | 2 cut(s) | 297, 1116 |
| TscAI | CASTG | 1 cut(s) | 1005 |
| TseFI | GTSAC | 3 cut(s) | 67, 148, 989 |
| TseI | GCWGC | 2 cut(s) | 396, 407 |
| Tsp45I | GTSAC | 3 cut(s) | 67, 148, 989 |
| TspDTI | ATGAA | 5 cut(s) | 33, 864, 1167, 1206, 1212 |
| TspRI | CASTG | 1 cut(s) | 1005 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1164 |
| VneI | GTGCAC | 1 cut(s) | 223 |
| VpaK11BI | GGWCC | 1 cut(s) | 387 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 827 |
| XapI | RAATTY | 3 cut(s) | 587, 595, 1171 |
| XceI | RCATGY | 2 cut(s) | 707, 935 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 397, 1087 |
| XhoI | CTCGAG | 1 cut(s) | 606 |
| XspI | CTAG | 1 cut(s) | 944 |
| Zsp2I | ATGCAT | 1 cut(s) | 1184 |