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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G67550 |
| fragaria_vesca | FvH4_1g17730 FvH4_1g17750 FvH4_1g17750 |
| malus_domestica | MD02G1186300.v1.1 |
| prunus_persica | Prupe.6G220300_v2.0.a1 Prupe.6G220300_v2.0.a1 |
| pyrus_communis | pycom02g15130 pycom02g15140 |
| rosa_chinensis | RchiOBHm_Chr2g0108061 |
| rosa_laevigata | RLG00000017637 |
| rosa_roxburghii | Rroxscaffold_2G00135650 |
| rosa_rugosa | Rorug02G0149900 Rorug02G0150000 |
| rosa_samantha | Rh2AG199200 Rh2BG212000 Rh2CG203800 Rh2DG206800 |
| rosa_wichuraiana | Rw2G015810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 726 |
| AccB1I | GGYRCC | 1 cut(s) | 726 |
| AciI | CCGC | 2 cut(s) | 185, 565 |
| AclWI | GGATC | 5 cut(s) | 110, 524, 880, 896, 1151 |
| AcsI | RAATTY | 3 cut(s) | 274, 970, 1308 |
| AfaI | GTAC | 5 cut(s) | 30, 292, 622, 657, 728 |
| AfeI | AGCGCT | 1 cut(s) | 911 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 285, 652, 1061, 1140 |
| AflIII | ACRYGT | 1 cut(s) | 830 |
| AjnI | CCWGG | 3 cut(s) | 450, 730, 1220 |
| AluBI | AGCT | 9 cut(s) | 102, 549, 674, 839, 882, 922, 1080, 1278, 1452 |
| AluI | AGCT | 9 cut(s) | 102, 549, 674, 839, 882, 922, 1080, 1278, 1452 |
| Alw26I | GTCTC | 1 cut(s) | 103 |
| AlwI | GGATC | 5 cut(s) | 110, 524, 880, 896, 1151 |
| Ama87I | CYCGRG | 1 cut(s) | 1200 |
| Aor51HI | AGCGCT | 1 cut(s) | 911 |
| AoxI | GGCC | 4 cut(s) | 1064, 1218, 1337, 1368 |
| ApeKI | GCWGC | 3 cut(s) | 99, 520, 718 |
| ApoI | RAATTY | 3 cut(s) | 274, 970, 1308 |
| Asp718I | GGTACC | 1 cut(s) | 726 |
| AspLEI | GCGC | 3 cut(s) | 126, 391, 912 |
| AspS9I | GGNCC | 3 cut(s) | 316, 1064, 1368 |
| AsuC2I | CCSGG | 1 cut(s) | 1063 |
| AsuHPI | GGTGA | 3 cut(s) | 60, 1432, 1462 |
| AvaI | CYCGRG | 1 cut(s) | 1200 |
| AvaII | GGWCC | 1 cut(s) | 316 |
| BanI | GGYRCC | 1 cut(s) | 726 |
| BbsI | GAAGAC | 1 cut(s) | 422 |
| BbvI | GCAGC | 3 cut(s) | 111, 507, 705 |
| BccI | CCATC | 6 cut(s) | 341, 482, 919, 1115, 1298, 1475 |
| BciT130I | CCWGG | 3 cut(s) | 452, 732, 1222 |
| BcnI | CCSGG | 1 cut(s) | 1063 |
| BcoDI | GTCTC | 1 cut(s) | 103 |
| BfaI | CTAG | 3 cut(s) | 365, 1253, 1385 |
| BfmI | CTRYAG | 1 cut(s) | 1075 |
| BfoI | RGCGCY | 2 cut(s) | 392, 913 |
| BglII | AGATCT | 1 cut(s) | 407 |
| BisI | GCNGC | 4 cut(s) | 100, 186, 521, 719 |
| BlpI | GCTNAGC | 1 cut(s) | 1274 |
| BlsI | GCNGC | 4 cut(s) | 101, 187, 522, 720 |
| BmcAI | AGTACT | 1 cut(s) | 292 |
| Bme1390I | CCNGG | 4 cut(s) | 452, 732, 1063, 1222 |
| Bme18I | GGWCC | 1 cut(s) | 316 |
| BmeT110I | CYCGRG | 1 cut(s) | 1200 |
| BmgT120I | GGNCC | 3 cut(s) | 316, 1064, 1368 |
| BmiI | GGNNCC | 2 cut(s) | 439, 728 |
| BmrFI | CCNGG | 4 cut(s) | 452, 732, 1063, 1222 |
| BmrI | ACTGGG | 3 cut(s) | 184, 1083, 1106 |
| BmsI | GCATC | 2 cut(s) | 386, 1093 |
| BmuI | ACTGGG | 3 cut(s) | 184, 1083, 1106 |
| BpiI | GAAGAC | 1 cut(s) | 422 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 439, 471 |
| BpmI | CTGGAG | 1 cut(s) | 240 |
| Bpu10I | CCTNAGC | 1 cut(s) | 906 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1274 |
| BpuMI | CCSGG | 1 cut(s) | 1063 |
| BsaAI | YACGTR | 2 cut(s) | 652, 1043 |
| BsaI | GGTCTC | 1 cut(s) | 103 |
| BsaJI | CCNNGG | 3 cut(s) | 537, 730, 1221 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 12, 42, 314, 344 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 285, 652, 1061, 1140 |
| Bse1I | ACTGG | 4 cut(s) | 179, 796, 1089, 1112 |
| Bse3DI | GCAATG | 2 cut(s) | 501, 1330 |
| BseBI | CCWGG | 3 cut(s) | 452, 732, 1222 |
| BseDI | CCNNGG | 3 cut(s) | 537, 730, 1221 |
| BseGI | GGATG | 4 cut(s) | 234, 560, 1107, 1309 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 285, 652, 1061, 1140 |
| BseMI | GCAATG | 2 cut(s) | 501, 1330 |
| BseMII | CTCAG | 4 cut(s) | 897, 927, 1113, 1265 |
| BseNI | ACTGG | 4 cut(s) | 179, 796, 1089, 1112 |
| BseRI | GAGGAG | 1 cut(s) | 701 |
| BseXI | GCAGC | 3 cut(s) | 111, 507, 705 |
| BshFI | GGCC | 4 cut(s) | 1066, 1220, 1339, 1370 |
| BshNI | GGYRCC | 1 cut(s) | 726 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1200 |
| BsiSI | CCGG | 1 cut(s) | 1062 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 285, 652, 1061, 1140 |
| BsmAI | GTCTC | 1 cut(s) | 103 |
| BsmI | GAATGC | 1 cut(s) | 1292 |
| BsnI | GGCC | 4 cut(s) | 1066, 1220, 1339, 1370 |
| Bso31I | GGTCTC | 1 cut(s) | 103 |
| BsoBI | CYCGRG | 1 cut(s) | 1200 |
| Bsp143I | GATC | 7 cut(s) | 115, 407, 529, 628, 885, 901, 1143 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1274 |
| BspACI | CCGC | 2 cut(s) | 185, 565 |
| BspANI | GGCC | 4 cut(s) | 1066, 1220, 1339, 1370 |
| BspCNI | CTCAG | 4 cut(s) | 898, 926, 1112, 1266 |
| BspLI | GGNNCC | 2 cut(s) | 439, 728 |
| BspPI | GGATC | 5 cut(s) | 110, 524, 880, 896, 1151 |
| BspT107I | GGYRCC | 1 cut(s) | 726 |
| BspTNI | GGTCTC | 1 cut(s) | 103 |
| BsrDI | GCAATG | 2 cut(s) | 501, 1330 |
| BsrI | ACTGG | 4 cut(s) | 179, 796, 1089, 1112 |
| BssECI | CCNNGG | 3 cut(s) | 537, 730, 1221 |
| BssMI | GATC | 7 cut(s) | 115, 407, 529, 628, 885, 901, 1143 |
| BssT1I | CCWWGG | 1 cut(s) | 537 |
| Bst2UI | CCWGG | 3 cut(s) | 452, 732, 1222 |
| Bst4CI | ACNGT | 4 cut(s) | 320, 872, 953, 1414 |
| BstBAI | YACGTR | 2 cut(s) | 652, 1043 |
| BstC8I | GCNNGC | 3 cut(s) | 345, 1337, 1481 |
| BstDEI | CTNAG | 6 cut(s) | 878, 898, 906, 913, 1099, 1274 |
| BstF5I | GGATG | 4 cut(s) | 234, 560, 1107, 1309 |
| BstH2I | RGCGCY | 2 cut(s) | 392, 913 |
| BstHHI | GCGC | 3 cut(s) | 126, 391, 912 |
| BstKTI | GATC | 7 cut(s) | 118, 410, 532, 631, 888, 904, 1146 |
| BstMAI | GTCTC | 1 cut(s) | 103 |
| BstMBI | GATC | 7 cut(s) | 115, 407, 529, 628, 885, 901, 1143 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 185, 374, 461, 505 |
| BstNI | CCWGG | 3 cut(s) | 452, 732, 1222 |
| BstNSI | RCATGY | 2 cut(s) | 834, 1176 |
| BstSCI | CCNGG | 4 cut(s) | 450, 730, 1061, 1220 |
| BstSFI | CTRYAG | 1 cut(s) | 1075 |
| BstSNI | TACGTA | 1 cut(s) | 1043 |
| BstV1I | GCAGC | 3 cut(s) | 111, 507, 705 |
| BstV2I | GAAGAC | 1 cut(s) | 422 |
| BstX2I | RGATCY | 2 cut(s) | 407, 901 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1396 |
| BstYI | RGATCY | 2 cut(s) | 407, 901 |
| BsuRI | GGCC | 4 cut(s) | 1066, 1220, 1339, 1370 |
| BtsCI | GGATG | 4 cut(s) | 234, 560, 1107, 1309 |
| Cac8I | GCNNGC | 3 cut(s) | 345, 1337, 1481 |
| CfoI | GCGC | 3 cut(s) | 126, 391, 912 |
| Cfr13I | GGNCC | 3 cut(s) | 316, 1064, 1368 |
| Csp6I | GTAC | 5 cut(s) | 29, 291, 621, 656, 727 |
| CviQI | GTAC | 5 cut(s) | 29, 291, 621, 656, 727 |
| DdeI | CTNAG | 6 cut(s) | 878, 898, 906, 913, 1099, 1274 |
| DpnI | GATC | 7 cut(s) | 117, 409, 531, 630, 887, 903, 1145 |
| DpnII | GATC | 7 cut(s) | 115, 407, 529, 628, 885, 901, 1143 |
| DraI | TTTAAA | 1 cut(s) | 159 |
| Eco105I | TACGTA | 1 cut(s) | 1043 |
| Eco130I | CCWWGG | 1 cut(s) | 537 |
| Eco31I | GGTCTC | 1 cut(s) | 103 |
| Eco47I | GGWCC | 1 cut(s) | 316 |
| Eco47III | AGCGCT | 1 cut(s) | 911 |
| Eco88I | CYCGRG | 1 cut(s) | 1200 |
| EcoRI | GAATTC | 2 cut(s) | 274, 970 |
| EcoRII | CCWGG | 3 cut(s) | 450, 730, 1220 |
| EcoT14I | CCWWGG | 1 cut(s) | 537 |
| ErhI | CCWWGG | 1 cut(s) | 537 |
| FauI | CCCGC | 1 cut(s) | 572 |
| FauNDI | CATATG | 1 cut(s) | 504 |
| Fnu4HI | GCNGC | 4 cut(s) | 100, 186, 521, 719 |
| FokI | GGATG | 4 cut(s) | 241, 547, 1094, 1316 |
| Fsp4HI | GCNGC | 4 cut(s) | 100, 186, 521, 719 |
| FspBI | CTAG | 3 cut(s) | 365, 1253, 1385 |
| GlaI | GCGC | 3 cut(s) | 125, 390, 911 |
| GluI | GCNGC | 4 cut(s) | 100, 186, 521, 719 |
| GsuI | CTGGAG | 1 cut(s) | 240 |
| HaeII | RGCGCY | 2 cut(s) | 392, 913 |
| HaeIII | GGCC | 4 cut(s) | 1066, 1220, 1339, 1370 |
| HapII | CCGG | 1 cut(s) | 1062 |
| HhaI | GCGC | 3 cut(s) | 126, 391, 912 |
| Hin6I | GCGC | 3 cut(s) | 124, 389, 910 |
| HinP1I | GCGC | 3 cut(s) | 124, 389, 910 |
| HindIII | AAGCTT | 1 cut(s) | 1450 |
| HinfI | GANTC | 1 cut(s) | 581 |
| HpaII | CCGG | 1 cut(s) | 1062 |
| HphI | GGTGA | 3 cut(s) | 60, 1432, 1462 |
| Hpy166II | GTNNAC | 1 cut(s) | 679 |
| Hpy188I | TCNGA | 6 cut(s) | 468, 479, 916, 1102, 1285, 1315 |
| Hpy188III | TCNNGA | 7 cut(s) | 106, 268, 905, 1200, 1253, 1436, 1456 |
| Hpy8I | GTNNAC | 1 cut(s) | 679 |
| HpyAV | CCTTC | 5 cut(s) | 274, 359, 427, 818, 1303 |
| HpyCH4III | ACNGT | 4 cut(s) | 320, 872, 953, 1414 |
| HpyCH4IV | ACGT | 3 cut(s) | 56, 651, 1042 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 185, 374, 461, 505 |
| HpyF3I | CTNAG | 6 cut(s) | 878, 898, 906, 913, 1099, 1274 |
| HpySE526I | ACGT | 3 cut(s) | 56, 651, 1042 |
| HspAI | GCGC | 3 cut(s) | 124, 389, 910 |
| KpnI | GGTACC | 1 cut(s) | 730 |
| Kzo9I | GATC | 7 cut(s) | 115, 407, 529, 628, 885, 901, 1143 |
| LmnI | GCTCC | 3 cut(s) | 91, 437, 1295 |
| Lsp1109I | GCAGC | 3 cut(s) | 111, 507, 705 |
| LweI | GCATC | 2 cut(s) | 386, 1093 |
| MaeI | CTAG | 3 cut(s) | 365, 1253, 1385 |
| MaeII | ACGT | 3 cut(s) | 56, 651, 1042 |
| MaeIII | GTNAC | 5 cut(s) | 320, 484, 979, 1151, 1420 |
| MalI | GATC | 7 cut(s) | 117, 409, 531, 630, 887, 903, 1145 |
| MboI | GATC | 7 cut(s) | 115, 407, 529, 628, 885, 901, 1143 |
| MboII | GAAGA | 6 cut(s) | 283, 328, 427, 629, 796, 1458 |
| MfeI | CAATTG | 1 cut(s) | 624 |
| MflI | RGATCY | 2 cut(s) | 407, 901 |
| MlyI | GAGTC | 1 cut(s) | 575 |
| MmeI | TCCRAC | 3 cut(s) | 1012, 1096, 1289 |
| MnlI | CCTC | 4 cut(s) | 140, 722, 1216, 1381 |
| MseI | TTAA | 6 cut(s) | 131, 158, 303, 767, 1344, 1406 |
| MslI | CAYNNNNRTG | 4 cut(s) | 73, 207, 338, 1394 |
| MspI | CCGG | 1 cut(s) | 1062 |
| MspR9I | CCNGG | 4 cut(s) | 452, 732, 1063, 1222 |
| MunI | CAATTG | 1 cut(s) | 624 |
| Mva1269I | GAATGC | 1 cut(s) | 1292 |
| MvaI | CCWGG | 3 cut(s) | 452, 732, 1222 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 185, 374, 461, 505 |
| NciI | CCSGG | 1 cut(s) | 1063 |
| NdeI | CATATG | 1 cut(s) | 504 |
| NdeII | GATC | 7 cut(s) | 115, 407, 529, 628, 885, 901, 1143 |
| NlaIV | GGNNCC | 2 cut(s) | 439, 728 |
| NmuCI | GTSAC | 2 cut(s) | 320, 1420 |
| NspI | RCATGY | 2 cut(s) | 834, 1176 |
| PciI | ACATGT | 1 cut(s) | 830 |
| PctI | GAATGC | 1 cut(s) | 1292 |
| PkrI | GCNGC | 4 cut(s) | 101, 187, 522, 720 |
| PleI | GAGTC | 1 cut(s) | 575 |
| PpsI | GAGTC | 1 cut(s) | 575 |
| Ppu21I | YACGTR | 2 cut(s) | 652, 1043 |
| PscI | ACATGT | 1 cut(s) | 830 |
| Psp6I | CCWGG | 3 cut(s) | 450, 730, 1220 |
| PspGI | CCWGG | 3 cut(s) | 450, 730, 1220 |
| PspN4I | GGNNCC | 2 cut(s) | 439, 728 |
| PspPI | GGNCC | 3 cut(s) | 316, 1064, 1368 |
| PsuI | RGATCY | 2 cut(s) | 407, 901 |
| RsaI | GTAC | 5 cut(s) | 30, 292, 622, 657, 728 |
| RsaNI | GTAC | 5 cut(s) | 29, 291, 621, 656, 727 |
| RseI | CAYNNNNRTG | 4 cut(s) | 73, 207, 338, 1394 |
| SaqAI | TTAA | 6 cut(s) | 131, 158, 303, 767, 1344, 1406 |
| SatI | GCNGC | 4 cut(s) | 100, 186, 521, 719 |
| Sau3AI | GATC | 7 cut(s) | 115, 407, 529, 628, 885, 901, 1143 |
| Sau96I | GGNCC | 3 cut(s) | 316, 1064, 1368 |
| ScaI | AGTACT | 1 cut(s) | 292 |
| SchI | GAGTC | 1 cut(s) | 575 |
| ScrFI | CCNGG | 4 cut(s) | 452, 732, 1063, 1222 |
| SfaNI | GCATC | 2 cut(s) | 386, 1093 |
| SfcI | CTRYAG | 1 cut(s) | 1075 |
| SinI | GGWCC | 1 cut(s) | 316 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 73, 207, 338, 1394 |
| SnaBI | TACGTA | 1 cut(s) | 1043 |
| SsiI | CCGC | 2 cut(s) | 185, 565 |
| SspI | AATATT | 1 cut(s) | 592 |
| SspMI | CTAG | 3 cut(s) | 365, 1253, 1385 |
| StyD4I | CCNGG | 4 cut(s) | 450, 730, 1061, 1220 |
| StyI | CCWWGG | 1 cut(s) | 537 |
| TaaI | ACNGT | 4 cut(s) | 320, 872, 953, 1414 |
| TaiI | ACGT | 3 cut(s) | 59, 654, 1045 |
| TaqI | TCGA | 3 cut(s) | 631, 798, 884 |
| TatI | WGTACW | 1 cut(s) | 290 |
| TauI | GCSGC | 1 cut(s) | 188 |
| Tru1I | TTAA | 6 cut(s) | 131, 158, 303, 767, 1344, 1406 |
| Tru9I | TTAA | 6 cut(s) | 131, 158, 303, 767, 1344, 1406 |
| TseFI | GTSAC | 2 cut(s) | 320, 1420 |
| TseI | GCWGC | 3 cut(s) | 99, 520, 718 |
| Tsp45I | GTSAC | 2 cut(s) | 320, 1420 |
| TspDTI | ATGAA | 4 cut(s) | 316, 328, 428, 946 |
| TspGWI | ACGGA | 1 cut(s) | 437 |
| VpaK11BI | GGWCC | 1 cut(s) | 316 |
| XapI | RAATTY | 3 cut(s) | 274, 970, 1308 |
| XbaI | TCTAGA | 1 cut(s) | 1252 |
| XceI | RCATGY | 2 cut(s) | 834, 1176 |
| XspI | CTAG | 3 cut(s) | 365, 1253, 1385 |
| ZrmI | AGTACT | 1 cut(s) | 292 |