Prupe.6G224500_v2.0.a1

DnaJ domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
22919038 .. 22924637
5600 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G224500.4

Sequence Viewer

Length: 1584 bp
ATGGCTTCTCATCCCGGAGATTTGCTTCGCCATCGTCCATTTCCTCTGCTCTCAATTCGACCAAATCCAAGGTGTTATCTCTTATTTATCTTCAATCAGAGTACCGGAACTCGGTGGTTAAGTAGCAGAACCGAGTCAGCTCGGGCCGAGTTCACCTCGGAGAACGCCTATGAGGTCTTAGGCGTTTCAGAAACCAGCTCATTTGCCGAAATCAAAGCTTCTTTCCACAAATTGGCGAAACAGACTCATCCGGACCTCGCCGAGTCCAAGAACGATTCCGATGCTTCCCGCAGATTCGTGCAAATCCTCGCCGCCTATGAGATTCTTTCAGATTGCGAAAAGAGGGCCCATTATGACAGGGACCTGTTATCTCAGAGAAATTTTATGCAGAAAAATTCTGGGTGCGGCATGACATTGCACATGTACAAGCGTCATCTAACTACATACAAGCAGATGGAAGTTGTTGAATGGTTGAAGTGGTATAGACTTGCTATAAATGATGTGCTGTCAGAGAGGAAGGTGGTTGTTGGAACAGGTTATTTTGATGTTCTTGAGGGAGATTTTTATTCAGCCATACATGCGGCGTACTATGGCCCTCTAATTGAGTCTATGGACCTTCTTCCTGACTGCTTTGAAGCTGAAGAGAGATCTGTGTATGAAACCCCAGAGGTGCTGCATTTTGTTTCAGGCCGTGATCTTTTTGGGATGGTCTGCCTGGTCAATATAGTTCCAGAGTTATCATCTTACAGCAATAAGAAATTAAGTTATTCCACATCTGCGGGTTTGGGGATTTGTCAATCTGTTCAGGACTTGAGAATCTGCATGAATTCTGGTGGTGTTGATGATGCTGGAAATGCTCATGTGCGAACCTGGGATGTTACAGATGAAACATCAGATGCATATAAAGATTTAGAATTGCATATATCTGGGAGGGTGGTTGCTACGGCCACCAGAGCCCCTCCAAAAAGCTACTCTGATGGGATGCAGAATGAAGAGTCTGATCACATTCGTGTATTTCTGAGCTCTAATGAAAATCCTGTCCATACCAGCGAAGGGTTTACTGAAGATTCTTTTTCAGGTGCTGCCGTTGGATCGAGGATTCTATTGGGAACTATAACCGGATTAGGGACTAGCTCAGAAGAAGGGTCTGGCCTTGTCTACAATAGCAGTGGTACCAAAACCCATGTGATTATGAAGCATAGAACATTGCTGGTGAAACACATGTTTTGGTATGAATTGGGAGAAAAGGTTTCTGTTTGTGAGTGTAGATGCAGTAGAGCCCAGTTACCACCAAGCAAATATTGGCTGTTTGAGCCTCGCTGTGGCATGCATGATATAGGTGGTTGGTATATTGAAACATTTGGCAGAGATAAGAAAGGCCGGATGTTGCCATCACAACGGTATTGGGATGGCTTTGATGCAGGCAAACAATTTGAACGGAGACTCCATCCTGCAATGTATCTTCTTGCTCTTGCATATAGAACTTTGGATCTTGAAGATGCAAAAAGAAGGAAAAGTGCATTCAGGGATGTTGTTGACAAACGGATTTTTAAATTTCTCAATTGGTGCAAAAGACTTGTTTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

528

Amino Acids

59.95

Weight (kDa)

6.81

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1172
AccB1I GGYRCC 1 cut(s) 1172
AccB7I CCANNNNNTGG 1 cut(s) 232
AccI GTMKAC 1 cut(s) 1158
AccIII TCCGGA 1 cut(s) 250
AciI CCGC 5 cut(s) 289, 312, 405, 581, 779
AclWI GGATC 2 cut(s) 1099, 1497
AcoI YGGCCR 1 cut(s) 945
AcsI RAATTY 4 cut(s) 379, 394, 826, 1553
AcuI CTGAAG 2 cut(s) 660, 1083
AfaI GTAC 4 cut(s) 103, 425, 587, 1174
AfiI CCNNNNNNNGG 5 cut(s) 111, 232, 1053, 1125, 1322
AflIII ACRYGT 2 cut(s) 420, 1221
AgsI TTSAA 7 cut(s) 94, 467, 475, 635, 1355, 1436, 1496
AjnI CCWGG 2 cut(s) 714, 869
AleI CACNNNNGTG 1 cut(s) 1008
AloI GAACNNNNNNTCC 2 cut(s) 1428, 1460
AluBI AGCT 7 cut(s) 140, 198, 218, 638, 969, 1023, 1134
AluI AGCT 7 cut(s) 140, 198, 218, 638, 969, 1023, 1134
Alw21I GWGCWC 1 cut(s) 1025
Alw26I GTCTC 1 cut(s) 1435
AlwI GGATC 2 cut(s) 1099, 1497
AlwNI CAGNNNCTG 1 cut(s) 1082
Ama87I CYCGRG 1 cut(s) 141
Aor13HI TCCGGA 1 cut(s) 250
AoxI GGCC 7 cut(s) 144, 345, 592, 688, 945, 1150, 1378
ApaI GGGCCC 1 cut(s) 349
ApeKI GCWGC 2 cut(s) 673, 1082
ApoI RAATTY 4 cut(s) 379, 394, 826, 1553
Asp718I GGTACC 1 cut(s) 1172
AspS9I GGNCC 7 cut(s) 144, 253, 345, 346, 361, 593, 613
AsuC2I CCSGG 1 cut(s) 15
AsuHPI GGTGA 2 cut(s) 145, 1225
AvaI CYCGRG 1 cut(s) 141
AvaII GGWCC 3 cut(s) 253, 361, 613
BaeGI GKGCMC 1 cut(s) 349
BanI GGYRCC 1 cut(s) 1172
BanII GRGCYC 4 cut(s) 349, 958, 1025, 1282
Bbv12I GWGCWC 1 cut(s) 1025
BbvI GCAGC 2 cut(s) 660, 1069
BccI CCATC 7 cut(s) 39, 448, 700, 971, 1399, 1403, 1455
BceAI ACGGC 3 cut(s) 675, 960, 1070
BcgI CGANNNNNNTGC 2 cut(s) 263, 297
BciT130I CCWGG 2 cut(s) 716, 871
BclI TGATCA 1 cut(s) 1000
BcnI CCSGG 1 cut(s) 15
BcoDI GTCTC 1 cut(s) 1435
BfaI CTAG 1 cut(s) 1131
BglII AGATCT 1 cut(s) 647
BisI GCNGC 5 cut(s) 312, 406, 582, 674, 1083
BlsI GCNGC 5 cut(s) 313, 407, 583, 675, 1084
Bme1390I CCNGG 3 cut(s) 15, 716, 871
Bme18I GGWCC 3 cut(s) 253, 361, 613
BmeT110I CYCGRG 1 cut(s) 141
BmgT120I GGNCC 7 cut(s) 144, 253, 345, 346, 361, 593, 613
BmiI GGNNCC 3 cut(s) 347, 362, 1174
BmrFI CCNGG 3 cut(s) 15, 716, 871
BmrI ACTGGG 1 cut(s) 1276
BmsI GCATC 7 cut(s) 271, 835, 886, 972, 1259, 1408, 1489
BmuI ACTGGG 1 cut(s) 1276
BplI GAGNNNNNCTC 2 cut(s) 140, 172
BpuEI CTTGAG 2 cut(s) 572, 832
BpuMI CCSGG 1 cut(s) 15
BsaJI CCNNGG 3 cut(s) 68, 156, 870
BsaWI WCCGGW 3 cut(s) 104, 250, 1118
BsaXI ACNNNNNCTCC 4 cut(s) 1233, 1263, 1428, 1458
Bsc4I CCNNNNNNNGG 5 cut(s) 111, 232, 1053, 1125, 1322
Bse1I ACTGG 1 cut(s) 1282
Bse3DI GCAATG 3 cut(s) 413, 1205, 1461
BseAI TCCGGA 1 cut(s) 250
BseBI CCWGG 2 cut(s) 716, 871
BseDI CCNNGG 3 cut(s) 68, 156, 870
BseGI GGATG 9 cut(s) 10, 247, 711, 880, 987, 1389, 1414, 1447, 1534
BseLI CCNNNNNNNGG 5 cut(s) 111, 232, 1053, 1125, 1322
BseMI GCAATG 3 cut(s) 413, 1205, 1461
BseMII CTCAG 3 cut(s) 386, 1010, 1149
BseNI ACTGG 1 cut(s) 1282
BseSI GKGCMC 1 cut(s) 349
BseXI GCAGC 2 cut(s) 660, 1069
BshFI GGCC 7 cut(s) 146, 347, 594, 690, 947, 1152, 1380
BshNI GGYRCC 1 cut(s) 1172
BsiHKAI GWGCWC 1 cut(s) 1025
BsiHKCI CYCGRG 1 cut(s) 141
BsiSI CCGG 5 cut(s) 15, 105, 251, 1119, 1381
BslFI GGGAC 2 cut(s) 374, 1141
BslI CCNNNNNNNGG 5 cut(s) 111, 232, 1053, 1125, 1322
BsmAI GTCTC 1 cut(s) 1435
BsmFI GGGAC 2 cut(s) 374, 1141
BsmI GAATGC 1 cut(s) 1520
BsnI GGCC 7 cut(s) 146, 347, 594, 690, 947, 1152, 1380
BsoBI CYCGRG 1 cut(s) 141
Bsp120I GGGCCC 1 cut(s) 345
Bsp1286I GDGCHC 4 cut(s) 349, 958, 1025, 1282
Bsp13I TCCGGA 1 cut(s) 250
Bsp1407I TGTACA 1 cut(s) 423
Bsp143I GATC 5 cut(s) 647, 694, 1000, 1091, 1489
BspACI CCGC 5 cut(s) 289, 312, 405, 581, 779
BspANI GGCC 7 cut(s) 146, 347, 594, 690, 947, 1152, 1380
BspCNI CTCAG 3 cut(s) 385, 1011, 1148
BspEI TCCGGA 1 cut(s) 250
BspLI GGNNCC 3 cut(s) 347, 362, 1174
BspPI GGATC 2 cut(s) 1099, 1497
BspT107I GGYRCC 1 cut(s) 1172
BsrDI GCAATG 3 cut(s) 413, 1205, 1461
BsrGI TGTACA 1 cut(s) 423
BsrI ACTGG 1 cut(s) 1282
BssECI CCNNGG 3 cut(s) 68, 156, 870
BssMI GATC 5 cut(s) 647, 694, 1000, 1091, 1489
BssT1I CCWWGG 1 cut(s) 68
Bst2UI CCWGG 2 cut(s) 716, 871
Bst4CI ACNGT 1 cut(s) 1401
Bst6I CTCTTC 2 cut(s) 636, 987
BstAUI TGTACA 1 cut(s) 423
BstC8I GCNNGC 2 cut(s) 1328, 1423
BstDEI CTNAG 4 cut(s) 178, 372, 1019, 1135
BstF5I GGATG 9 cut(s) 10, 247, 711, 880, 987, 1389, 1414, 1447, 1534
BstKTI GATC 5 cut(s) 650, 697, 1003, 1094, 1492
BstMAI GTCTC 1 cut(s) 1435
BstMBI GATC 5 cut(s) 647, 694, 1000, 1091, 1489
BstMWI GCNNNNNNNGC 4 cut(s) 578, 854, 953, 1312
BstNI CCWGG 2 cut(s) 716, 871
BstNSI RCATGY 4 cut(s) 424, 581, 1225, 1330
BstSCI CCNGG 3 cut(s) 13, 714, 869
BstSLI GKGCMC 1 cut(s) 349
BstV1I GCAGC 2 cut(s) 660, 1069
BstX2I RGATCY 2 cut(s) 647, 1489
BstYI RGATCY 2 cut(s) 647, 1489
BsuRI GGCC 7 cut(s) 146, 347, 594, 690, 947, 1152, 1380
BtsCI GGATG 9 cut(s) 10, 247, 711, 880, 987, 1389, 1414, 1447, 1534
BtsI GCAGTG 1 cut(s) 1174
BtsIMutI CAGTG 1 cut(s) 1174
Cac8I GCNNGC 2 cut(s) 1328, 1423
CaiI CAGNNNCTG 1 cut(s) 1082
Cfr13I GGNCC 7 cut(s) 144, 253, 345, 346, 361, 593, 613
CseI GACGC 1 cut(s) 419
Csp6I GTAC 4 cut(s) 102, 424, 586, 1173
CspCI CAANNNNNGTGG 2 cut(s) 1150, 1185
CviAII CATG 9 cut(s) 409, 421, 578, 823, 860, 1184, 1222, 1327, 1331
CviQI GTAC 4 cut(s) 102, 424, 586, 1173
DdeI CTNAG 4 cut(s) 178, 372, 1019, 1135
DpnI GATC 5 cut(s) 649, 696, 1002, 1093, 1491
DpnII GATC 5 cut(s) 647, 694, 1000, 1091, 1489
DraI TTTAAA 1 cut(s) 1552
EaeI YGGCCR 1 cut(s) 945
Eam1104I CTCTTC 2 cut(s) 636, 987
EarI CTCTTC 2 cut(s) 636, 987
Ecl136II GAGCTC 1 cut(s) 1023
Eco130I CCWWGG 1 cut(s) 68
Eco24I GRGCYC 4 cut(s) 349, 958, 1025, 1282
Eco47I GGWCC 3 cut(s) 253, 361, 613
Eco53kI GAGCTC 1 cut(s) 1023
Eco57I CTGAAG 2 cut(s) 660, 1083
Eco88I CYCGRG 1 cut(s) 141
EcoICRI GAGCTC 1 cut(s) 1023
EcoO109I RGGNCCY 2 cut(s) 345, 361
EcoRI GAATTC 1 cut(s) 826
EcoRII CCWGG 2 cut(s) 714, 869
EcoT14I CCWWGG 1 cut(s) 68
EcoT22I ATGCAT 2 cut(s) 901, 1332
EcoT38I GRGCYC 4 cut(s) 349, 958, 1025, 1282
ErhI CCWWGG 1 cut(s) 68
FaeI CATG 9 cut(s) 412, 424, 581, 826, 863, 1187, 1225, 1330, 1334
FaqI GGGAC 2 cut(s) 374, 1141
FatI CATG 9 cut(s) 408, 420, 577, 822, 859, 1183, 1221, 1326, 1330
FauI CCCGC 2 cut(s) 296, 772
FbaI TGATCA 1 cut(s) 1000
FblI GTMKAC 1 cut(s) 1158
Fnu4HI GCNGC 5 cut(s) 312, 406, 582, 674, 1083
FokI GGATG 8 cut(s) 234, 718, 887, 994, 1396, 1421, 1434, 1541
FriOI GRGCYC 4 cut(s) 349, 958, 1025, 1282
Fsp4HI GCNGC 5 cut(s) 312, 406, 582, 674, 1083
FspBI CTAG 1 cut(s) 1131
GluI GCNGC 5 cut(s) 312, 406, 582, 674, 1083
HaeIII GGCC 7 cut(s) 146, 347, 594, 690, 947, 1152, 1380
HapII CCGG 5 cut(s) 15, 105, 251, 1119, 1381
HgaI GACGC 1 cut(s) 419
Hin1II CATG 9 cut(s) 412, 424, 581, 826, 863, 1187, 1225, 1330, 1334
HincII GTYRAC 1 cut(s) 1537
HindII GTYRAC 1 cut(s) 1537
HindIII AAGCTT 1 cut(s) 216
HpaII CCGG 5 cut(s) 15, 105, 251, 1119, 1381
HphI GGTGA 2 cut(s) 145, 1225
Hpy166II GTNNAC 4 cut(s) 153, 1059, 1159, 1537
Hpy188III TCNNGA 6 cut(s) 251, 551, 623, 731, 806, 1493
Hpy8I GTNNAC 4 cut(s) 153, 1059, 1159, 1537
HpyAV CCTTC 5 cut(s) 511, 626, 1046, 1136, 1503
HpyCH4III ACNGT 1 cut(s) 1401
HpyF10VI GCNNNNNNNGC 4 cut(s) 578, 854, 953, 1312
HpyF3I CTNAG 4 cut(s) 178, 372, 1019, 1135
Hsp92II CATG 9 cut(s) 412, 424, 581, 826, 863, 1187, 1225, 1330, 1334
Kpn2I TCCGGA 1 cut(s) 250
KpnI GGTACC 1 cut(s) 1176
Ksp22I TGATCA 1 cut(s) 1000
Kzo9I GATC 5 cut(s) 647, 694, 1000, 1091, 1489
Lsp1109I GCAGC 2 cut(s) 660, 1069
LweI GCATC 7 cut(s) 271, 835, 886, 972, 1259, 1408, 1489
MaeI CTAG 1 cut(s) 1131
MaeIII GTNAC 2 cut(s) 877, 1284
MalI GATC 5 cut(s) 649, 696, 1002, 1093, 1491
MboI GATC 5 cut(s) 647, 694, 1000, 1091, 1489
MboII GAAGA 8 cut(s) 82, 611, 653, 1004, 1076, 1151, 1454, 1508
MfeI CAATTG 1 cut(s) 1561
MflI RGATCY 2 cut(s) 647, 1489
MhlI GDGCHC 4 cut(s) 349, 958, 1025, 1282
MlyI GAGTC 6 cut(s) 143, 238, 272, 614, 1004, 1437
MmeI TCCRAC 2 cut(s) 508, 1069
Mph1103I ATGCAT 2 cut(s) 901, 1332
MroI TCCGGA 1 cut(s) 250
MseI TTAA 3 cut(s) 119, 761, 1551
MslI CAYNNNNRTG 1 cut(s) 1008
MspI CCGG 5 cut(s) 15, 105, 251, 1119, 1381
MspR9I CCNGG 3 cut(s) 15, 716, 871
MunI CAATTG 1 cut(s) 1561
Mva1269I GAATGC 1 cut(s) 1520
MvaI CCWGG 2 cut(s) 716, 871
MwoI GCNNNNNNNGC 4 cut(s) 578, 854, 953, 1312
NciI CCSGG 1 cut(s) 15
NdeII GATC 5 cut(s) 647, 694, 1000, 1091, 1489
NlaIII CATG 9 cut(s) 412, 424, 581, 826, 863, 1187, 1225, 1330, 1334
NlaIV GGNNCC 3 cut(s) 347, 362, 1174
NmeAIII GCCGAG 2 cut(s) 172, 286
NsiI ATGCAT 2 cut(s) 901, 1332
NspI RCATGY 4 cut(s) 424, 581, 1225, 1330
OliI CACNNNNGTG 1 cut(s) 1008
PaeI GCATGC 1 cut(s) 1330
PciI ACATGT 2 cut(s) 420, 1221
PctI GAATGC 1 cut(s) 1520
PfeI GAWTC 6 cut(s) 275, 294, 322, 816, 1067, 1099
PflMI CCANNNNNTGG 1 cut(s) 232
PfoI TCCNGGA 1 cut(s) 13
PkrI GCNGC 5 cut(s) 313, 407, 583, 675, 1084
PleI GAGTC 6 cut(s) 142, 238, 271, 613, 1003, 1437
PpsI GAGTC 6 cut(s) 142, 238, 271, 613, 1003, 1437
PpuMI RGGWCCY 1 cut(s) 361
PscI ACATGT 2 cut(s) 420, 1221
Psp124BI GAGCTC 1 cut(s) 1025
Psp5II RGGWCCY 1 cut(s) 361
Psp6I CCWGG 2 cut(s) 714, 869
PspGI CCWGG 2 cut(s) 714, 869
PspN4I GGNNCC 3 cut(s) 347, 362, 1174
PspOMI GGGCCC 1 cut(s) 345
PspPI GGNCC 7 cut(s) 144, 253, 345, 346, 361, 593, 613
PspPPI RGGWCCY 1 cut(s) 361
PstNI CAGNNNCTG 1 cut(s) 1082
PsuI RGATCY 2 cut(s) 647, 1489
RsaI GTAC 4 cut(s) 103, 425, 587, 1174
RsaNI GTAC 4 cut(s) 102, 424, 586, 1173
RseI CAYNNNNRTG 1 cut(s) 1008
SacI GAGCTC 1 cut(s) 1025
SaqAI TTAA 3 cut(s) 119, 761, 1551
SatI GCNGC 5 cut(s) 312, 406, 582, 674, 1083
Sau3AI GATC 5 cut(s) 647, 694, 1000, 1091, 1489
Sau96I GGNCC 7 cut(s) 144, 253, 345, 346, 361, 593, 613
SchI GAGTC 6 cut(s) 143, 238, 272, 614, 1004, 1437
ScrFI CCNGG 3 cut(s) 15, 716, 871
SduI GDGCHC 4 cut(s) 349, 958, 1025, 1282
SfaNI GCATC 7 cut(s) 271, 835, 886, 972, 1259, 1408, 1489
SinI GGWCC 3 cut(s) 253, 361, 613
SmiMI CAYNNNNRTG 1 cut(s) 1008
SmlI CTYRAG 2 cut(s) 551, 811
SmoI CTYRAG 2 cut(s) 551, 811
SphI GCATGC 1 cut(s) 1330
SsiI CCGC 5 cut(s) 289, 312, 405, 581, 779
SspI AATATT 1 cut(s) 1301
SspMI CTAG 1 cut(s) 1131
SstI GAGCTC 1 cut(s) 1025
StyD4I CCNGG 3 cut(s) 13, 714, 869
StyI CCWWGG 1 cut(s) 68
TaaI ACNGT 1 cut(s) 1401
TaqI TCGA 2 cut(s) 58, 1094
TatI WGTACW 1 cut(s) 423
TauI GCSGC 3 cut(s) 314, 408, 584
TfiI GAWTC 6 cut(s) 275, 294, 322, 816, 1067, 1099
Tru1I TTAA 3 cut(s) 119, 761, 1551
Tru9I TTAA 3 cut(s) 119, 761, 1551
TscAI CASTG 1 cut(s) 1174
TseI GCWGC 2 cut(s) 673, 1082
TspDTI ATGAA 7 cut(s) 672, 839, 900, 1005, 1044, 1208, 1248
TspGWI ACGGA 2 cut(s) 1453, 1558
TspRI CASTG 1 cut(s) 1174
Van91I CCANNNNNTGG 1 cut(s) 232
VpaK11BI GGWCC 3 cut(s) 253, 361, 613
XapI RAATTY 4 cut(s) 379, 394, 826, 1553
XceI RCATGY 4 cut(s) 424, 581, 1225, 1330
XcmI CCANNNNNNNNNTGG 1 cut(s) 1299
XmiI GTMKAC 1 cut(s) 1158
XspI CTAG 1 cut(s) 1131
Zsp2I ATGCAT 2 cut(s) 901, 1332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.