Prupe.6G277000_v2.0.a1

Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
26047385 .. 26051050
3666 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G277000.1

Sequence Viewer

Length: 1296 bp
ATGGCTTCCAACCAAGAATGCCTCTTGGAAAATGGCACAAGCAGTGAGGAGGAAGTGCACCTTGGCAGGACCGCTAGACAATTGTCGGCGTCTGCATTGCGCAAGAAGTCGGATCCTACACTGCCAAACAGTGTTCAAAATGGACATCTCAGGGAGTTGCTTGTTAATCTTCAGGTTGTTCTTCTGGGGACCAAGCTTGCGGTTCTCCTTCCCACCATTCCTCTGTCCATTTTTGCTGTGTATTATGGCTTTGGAAAGCCCTGGATTTTCACTCTAAGCTTACTTGCATTAACCTTACTTGCTGAGCGCATCAGTTTTCTCACAGAACAAATATCATACTACACTGGTCCAACAGTGGGAGGGCTCCTAAATGCAACATTTGGTAATGCCACAGAGCTGATTATAGCAATATCTGCTCTAAGTCATGGAAAAGTAGCCTTGCTCAAGTATTCTCTCTTGGGTTCAGTTCTTTCTAACCTTCTTTTGGTCCTTGGAACCTCCCTTTTCTGTGGTGGTCTTGCTAACCTCAGAAGGGAGCAAAAATTTGAAAGAAGACAGGCCAATGTGAACTCTCTCCTTCTACTTCTAGCAACATTCTGCCACACGCTCCCAATGCTGCTTCAATATGCTGGGGACTCTGCTGCAACAAAAGACCAAACACTCCAATTCTCAAGGGCCATTAGTATCCTAATGCTACTTTCTTATATTGCATTCATGTTCTTCCAGTTGTGGACTCACCACGGATTTTTCGAATTGCAGCAAGTATCAGAAGTTGATGGTGATGAAGATGTTGAAGAAGAAGTGGCTGAGATAGGTTTCTGGAGTGGATTTGCTTGGCTGTTTGCTGTCACTGCCATCACAGCTTTGTTGTCTGAGTATGTTGTGGGCACAATTGAGGATGCATCAAAATCTTGGGGTTTGTCTTTCAGCTTCCTCAGCCTCATCCTGGTACCAATTCTTGGAAATGCAGCTGAGCATGCAGGATCAATCATTTTTGCTTTCAAGAACAAGTTGGACATATCATTAGGAGTCTCTTTGGGGTCTGCAACTCAGGTCGCCATGTTCGTGGTCCCGTGCTGCGTCGTTGTTGCTTGGATAATGGGCATCAACATGGATCTTAACTTCAATCTCATTGAAACAGTGTCTCTTGCTCTAGCAGTGATCACCACAGCCTTTGCTTTACAGGATGGCACTTCCCATTATGTGAAAGGGTTGGTTCTTATTTTCTGCTACATTGTTATTGGAATCTGCTTCTTTGTATTCGAAACGCCGGTTGACCAAACAGCATCAACTTGA

Protein Analysis

432

Amino Acids

46.91

Weight (kDa)

5.12

Isoelectric Point (pI)

31.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016363)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 101
Acc65I GGTACC 1 cut(s) 949
AccB1I GGYRCC 1 cut(s) 949
AccB7I CCANNNNNTGG 1 cut(s) 959
AciI CCGC 2 cut(s) 72, 200
AclWI GGATC 4 cut(s) 107, 120, 991, 1122
AcsI RAATTY 1 cut(s) 542
AcuI CTGAAG 1 cut(s) 155
AcyI GRCGYC 1 cut(s) 89
AfaI GTAC 1 cut(s) 951
AfiI CCNNNNNNNGG 5 cut(s) 356, 484, 532, 946, 959
AgsI TTSAA 7 cut(s) 137, 548, 623, 794, 1003, 1126, 1136
AjnI CCWGG 2 cut(s) 260, 945
AjuI GAANNNNNNNTTGG 2 cut(s) 45, 77
AluBI AGCT 6 cut(s) 196, 279, 397, 863, 930, 971
AluI AGCT 6 cut(s) 196, 279, 397, 863, 930, 971
Alw21I GWGCWC 1 cut(s) 60
Alw26I GTCTC 2 cut(s) 1036, 1149
Alw44I GTGCAC 1 cut(s) 56
AlwI GGATC 4 cut(s) 107, 120, 991, 1122
AoxI GGCC 2 cut(s) 558, 675
ApaLI GTGCAC 1 cut(s) 56
ApeKI GCWGC 5 cut(s) 616, 641, 757, 968, 1077
ApoI RAATTY 1 cut(s) 542
Asp718I GGTACC 1 cut(s) 949
AspLEI GCGC 2 cut(s) 102, 309
AspS9I GGNCC 6 cut(s) 69, 189, 347, 487, 675, 1069
AsuHPI GGTGA 3 cut(s) 728, 791, 1156
AsuII TTCGAA 2 cut(s) 750, 1263
AvaII GGWCC 5 cut(s) 69, 189, 347, 487, 1069
BaeGI GKGCMC 2 cut(s) 60, 890
BamHI GGATCC 1 cut(s) 112
BanI GGYRCC 1 cut(s) 949
BanII GRGCYC 1 cut(s) 366
BbsI GAAGAC 1 cut(s) 559
Bbv12I GWGCWC 1 cut(s) 60
BbvCI CCTCAGC 1 cut(s) 935
BbvI GCAGC 5 cut(s) 603, 628, 769, 980, 1064
BccI CCATC 3 cut(s) 770, 863, 1181
BciT130I CCWGG 2 cut(s) 262, 947
BciVI GTATCC 1 cut(s) 695
BclI TGATCA 1 cut(s) 1161
BcoDI GTCTC 2 cut(s) 1036, 1149
BfaI CTAG 3 cut(s) 75, 587, 1154
BfuI GTATCC 1 cut(s) 695
BisI GCNGC 5 cut(s) 617, 642, 758, 969, 1078
BlpI GCTNAGC 2 cut(s) 303, 972
BlsI GCNGC 5 cut(s) 618, 643, 759, 970, 1079
Bme1390I CCNGG 2 cut(s) 262, 947
Bme18I GGWCC 5 cut(s) 69, 189, 347, 487, 1069
BmgT120I GGNCC 6 cut(s) 69, 189, 347, 487, 675, 1069
BmiI GGNNCC 6 cut(s) 114, 190, 365, 496, 951, 1071
BmrFI CCNGG 2 cut(s) 262, 947
BmsI GCATC 4 cut(s) 318, 889, 911, 1113
BoxI GACNNNNGTC 1 cut(s) 82
BpiI GAAGAC 1 cut(s) 559
BpmI CTGGAG 1 cut(s) 841
Bpu10I CCTNAGC 1 cut(s) 935
Bpu1102I GCTNAGC 2 cut(s) 303, 972
Bpu14I TTCGAA 2 cut(s) 750, 1263
BpuEI CTTGAG 2 cut(s) 428, 655
BsaHI GRCGYC 1 cut(s) 89
BsaJI CCNNGG 4 cut(s) 61, 260, 490, 739
Bsc4I CCNNNNNNNGG 5 cut(s) 356, 484, 532, 946, 959
Bse118I RCCGGY 1 cut(s) 1270
Bse1I ACTGG 2 cut(s) 349, 724
Bse3DI GCAATG 1 cut(s) 95
BseBI CCWGG 2 cut(s) 262, 947
BseDI CCNNGG 4 cut(s) 61, 260, 490, 739
BseGI GGATG 3 cut(s) 904, 942, 1192
BseLI CCNNNNNNNGG 5 cut(s) 356, 484, 532, 946, 959
BseMI GCAATG 1 cut(s) 95
BseMII CTCAG 8 cut(s) 163, 294, 541, 798, 864, 949, 963, 1064
BseNI ACTGG 2 cut(s) 349, 724
BseRI GAGGAG 1 cut(s) 62
BseSI GKGCMC 2 cut(s) 60, 890
BseXI GCAGC 5 cut(s) 603, 628, 769, 980, 1064
BseYI CCCAGC 1 cut(s) 629
BshFI GGCC 2 cut(s) 560, 677
BshNI GGYRCC 1 cut(s) 949
BsiHKAI GWGCWC 1 cut(s) 60
BsiSI CCGG 1 cut(s) 1271
BslFI GGGAC 3 cut(s) 202, 647, 1055
BslI CCNNNNNNNGG 5 cut(s) 356, 484, 532, 946, 959
BsmAI GTCTC 2 cut(s) 1036, 1149
BsmFI GGGAC 3 cut(s) 202, 647, 1055
BsmI GAATGC 2 cut(s) 23, 710
BsnI GGCC 2 cut(s) 560, 677
Bsp119I TTCGAA 2 cut(s) 750, 1263
Bsp1286I GDGCHC 3 cut(s) 60, 366, 890
Bsp143I GATC 4 cut(s) 112, 983, 1114, 1161
Bsp1720I GCTNAGC 2 cut(s) 303, 972
BspACI CCGC 2 cut(s) 72, 200
BspANI GGCC 2 cut(s) 560, 677
BspCNI CTCAG 8 cut(s) 162, 295, 540, 799, 865, 948, 964, 1063
BspLI GGNNCC 6 cut(s) 114, 190, 365, 496, 951, 1071
BspPI GGATC 4 cut(s) 107, 120, 991, 1122
BspT104I TTCGAA 2 cut(s) 750, 1263
BspT107I GGYRCC 1 cut(s) 949
BsrDI GCAATG 1 cut(s) 95
BsrFI RCCGGY 1 cut(s) 1270
BsrI ACTGG 2 cut(s) 349, 724
BssAI RCCGGY 1 cut(s) 1270
BssECI CCNNGG 4 cut(s) 61, 260, 490, 739
BssMI GATC 4 cut(s) 112, 983, 1114, 1161
BssNI GRCGYC 1 cut(s) 89
BssT1I CCWWGG 2 cut(s) 61, 490
Bst2UI CCWGG 2 cut(s) 262, 947
Bst4CI ACNGT 3 cut(s) 131, 355, 1141
BstACI GRCGYC 1 cut(s) 89
BstAPI GCANNNNNTGC 1 cut(s) 413
BstBI TTCGAA 2 cut(s) 750, 1263
BstC8I GCNNGC 2 cut(s) 198, 978
BstDSI CCRYGG 1 cut(s) 739
BstF5I GGATG 3 cut(s) 904, 942, 1192
BstHHI GCGC 2 cut(s) 102, 309
BstKTI GATC 4 cut(s) 115, 986, 1117, 1164
BstMAI GTCTC 2 cut(s) 1036, 1149
BstMBI GATC 4 cut(s) 112, 983, 1114, 1161
BstMWI GCNNNNNNNGC 6 cut(s) 413, 613, 851, 860, 936, 977
BstNI CCWGG 2 cut(s) 262, 947
BstNSI RCATGY 1 cut(s) 980
BstPAI GACNNNNGTC 1 cut(s) 82
BstSCI CCNGG 2 cut(s) 260, 945
BstSLI GKGCMC 2 cut(s) 60, 890
BstV1I GCAGC 5 cut(s) 603, 628, 769, 980, 1064
BstV2I GAAGAC 1 cut(s) 559
BstX2I RGATCY 2 cut(s) 112, 1114
BstXI CCANNNNNNTGG 1 cut(s) 1066
BstYI RGATCY 2 cut(s) 112, 1114
BsuI GTATCC 1 cut(s) 695
BsuRI GGCC 2 cut(s) 560, 677
BtgI CCRYGG 1 cut(s) 739
BtsCI GGATG 3 cut(s) 904, 942, 1192
BtsI GCAGTG 4 cut(s) 49, 119, 849, 1164
BtsIMutI CAGTG 8 cut(s) 49, 119, 136, 342, 360, 849, 1146, 1164
Cac8I GCNNGC 2 cut(s) 198, 978
CfoI GCGC 2 cut(s) 102, 309
Cfr10I RCCGGY 1 cut(s) 1270
Cfr13I GGNCC 6 cut(s) 69, 189, 347, 487, 675, 1069
CseI GACGC 2 cut(s) 78, 1069
Csp6I GTAC 1 cut(s) 950
CspCI CAANNNNNGTGG 2 cut(s) 1156, 1191
CviAII CATG 5 cut(s) 425, 715, 977, 1060, 1111
CviQI GTAC 1 cut(s) 950
DpnI GATC 4 cut(s) 114, 985, 1116, 1163
DpnII GATC 4 cut(s) 112, 983, 1114, 1161
Eco130I CCWWGG 2 cut(s) 61, 490
Eco24I GRGCYC 1 cut(s) 366
Eco47I GGWCC 5 cut(s) 69, 189, 347, 487, 1069
Eco57I CTGAAG 1 cut(s) 155
EcoRII CCWGG 2 cut(s) 260, 945
EcoT14I CCWWGG 2 cut(s) 61, 490
EcoT22I ATGCAT 1 cut(s) 904
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 2 cut(s) 61, 490
FaeI CATG 5 cut(s) 428, 718, 980, 1063, 1114
FalI AAGNNNNNCTT 2 cut(s) 45, 77
FaqI GGGAC 3 cut(s) 202, 647, 1055
FatI CATG 5 cut(s) 424, 714, 976, 1059, 1110
FbaI TGATCA 1 cut(s) 1161
Fnu4HI GCNGC 5 cut(s) 617, 642, 758, 969, 1078
FokI GGATG 3 cut(s) 911, 929, 1199
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 5 cut(s) 617, 642, 758, 969, 1078
FspBI CTAG 3 cut(s) 75, 587, 1154
FspI TGCGCA 1 cut(s) 101
GlaI GCGC 2 cut(s) 101, 308
GluI GCNGC 5 cut(s) 617, 642, 758, 969, 1078
GsaI CCCAGC 1 cut(s) 633
GsuI CTGGAG 1 cut(s) 841
HaeIII GGCC 2 cut(s) 560, 677
HapII CCGG 1 cut(s) 1271
HgaI GACGC 2 cut(s) 78, 1069
HhaI GCGC 2 cut(s) 102, 309
Hin1I GRCGYC 1 cut(s) 89
Hin1II CATG 5 cut(s) 428, 718, 980, 1063, 1114
Hin6I GCGC 2 cut(s) 100, 307
HinP1I GCGC 2 cut(s) 100, 307
HincII GTYRAC 1 cut(s) 1276
HindII GTYRAC 1 cut(s) 1276
HindIII AAGCTT 2 cut(s) 194, 277
HinfI GANTC 4 cut(s) 635, 733, 1029, 1245
HpaII CCGG 1 cut(s) 1271
HphI GGTGA 3 cut(s) 728, 791, 1156
Hpy166II GTNNAC 4 cut(s) 58, 568, 732, 1276
Hpy188I TCNGA 4 cut(s) 112, 530, 769, 874
Hpy188III TCNNGA 2 cut(s) 820, 1003
Hpy8I GTNNAC 4 cut(s) 58, 568, 732, 1276
Hpy99I CGWCG 1 cut(s) 1085
HpyAV CCTTC 4 cut(s) 218, 488, 525, 587
HpyCH4III ACNGT 3 cut(s) 131, 355, 1141
HpyF10VI GCNNNNNNNGC 6 cut(s) 413, 613, 851, 860, 936, 977
Hsp92I GRCGYC 1 cut(s) 89
Hsp92II CATG 5 cut(s) 428, 718, 980, 1063, 1114
HspAI GCGC 2 cut(s) 100, 307
KpnI GGTACC 1 cut(s) 953
Ksp22I TGATCA 1 cut(s) 1161
Kzo9I GATC 4 cut(s) 112, 983, 1114, 1161
LmnI GCTCC 3 cut(s) 369, 535, 612
Lsp1109I GCAGC 5 cut(s) 603, 628, 769, 980, 1064
LweI GCATC 4 cut(s) 318, 889, 911, 1113
MaeI CTAG 3 cut(s) 75, 587, 1154
MaeIII GTNAC 1 cut(s) 847
MalI GATC 4 cut(s) 114, 985, 1116, 1163
MboI GATC 4 cut(s) 112, 983, 1114, 1161
MboII GAAGA 7 cut(s) 161, 173, 564, 712, 797, 806, 809
MfeI CAATTG 2 cut(s) 80, 891
MflI RGATCY 2 cut(s) 112, 1114
MhlI GDGCHC 3 cut(s) 60, 366, 890
MluCI AATT 6 cut(s) 80, 542, 665, 752, 891, 954
MlyI GAGTC 3 cut(s) 629, 727, 1038
MmeI TCCRAC 4 cut(s) 33, 90, 374, 993
Mph1103I ATGCAT 1 cut(s) 904
MseI TTAA 3 cut(s) 165, 290, 1119
MslI CAYNNNNRTG 2 cut(s) 1064, 1109
MspA1I CMGCKG 1 cut(s) 971
MspI CCGG 1 cut(s) 1271
MspR9I CCNGG 2 cut(s) 262, 947
MunI CAATTG 2 cut(s) 80, 891
Mva1269I GAATGC 2 cut(s) 23, 710
MvaI CCWGG 2 cut(s) 262, 947
MwoI GCNNNNNNNGC 6 cut(s) 413, 613, 851, 860, 936, 977
NdeII GATC 4 cut(s) 112, 983, 1114, 1161
NlaIII CATG 5 cut(s) 428, 718, 980, 1063, 1114
NlaIV GGNNCC 6 cut(s) 114, 190, 365, 496, 951, 1071
NmuCI GTSAC 1 cut(s) 847
NsbI TGCGCA 1 cut(s) 101
NsiI ATGCAT 1 cut(s) 904
NspI RCATGY 1 cut(s) 980
NspV TTCGAA 2 cut(s) 750, 1263
PaeI GCATGC 1 cut(s) 980
PcsI WCGNNNNNNNCGW 2 cut(s) 747, 1062
PctI GAATGC 2 cut(s) 23, 710
PfeI GAWTC 1 cut(s) 1245
PflMI CCANNNNNTGG 1 cut(s) 959
PkrI GCNGC 5 cut(s) 618, 643, 759, 970, 1079
PleI GAGTC 3 cut(s) 629, 727, 1037
PpsI GAGTC 3 cut(s) 629, 727, 1037
PshAI GACNNNNGTC 1 cut(s) 82
Psp6I CCWGG 2 cut(s) 260, 945
PspFI CCCAGC 1 cut(s) 629
PspGI CCWGG 2 cut(s) 260, 945
PspN4I GGNNCC 6 cut(s) 114, 190, 365, 496, 951, 1071
PspPI GGNCC 6 cut(s) 69, 189, 347, 487, 675, 1069
PsuI RGATCY 2 cut(s) 112, 1114
PvuII CAGCTG 1 cut(s) 971
RsaI GTAC 1 cut(s) 951
RsaNI GTAC 1 cut(s) 950
RseI CAYNNNNRTG 2 cut(s) 1064, 1109
SaqAI TTAA 3 cut(s) 165, 290, 1119
SatI GCNGC 5 cut(s) 617, 642, 758, 969, 1078
Sau3AI GATC 4 cut(s) 112, 983, 1114, 1161
Sau96I GGNCC 6 cut(s) 69, 189, 347, 487, 675, 1069
SchI GAGTC 3 cut(s) 629, 727, 1038
ScrFI CCNGG 2 cut(s) 262, 947
SduI GDGCHC 3 cut(s) 60, 366, 890
SfaNI GCATC 4 cut(s) 318, 889, 911, 1113
SfuI TTCGAA 2 cut(s) 750, 1263
SinI GGWCC 5 cut(s) 69, 189, 347, 487, 1069
SmiMI CAYNNNNRTG 2 cut(s) 1064, 1109
SmlI CTYRAG 2 cut(s) 443, 670
SmoI CTYRAG 2 cut(s) 443, 670
SphI GCATGC 1 cut(s) 980
Sse9I AATT 6 cut(s) 80, 542, 665, 752, 891, 954
SsiI CCGC 2 cut(s) 72, 200
SspMI CTAG 3 cut(s) 75, 587, 1154
StyD4I CCNGG 2 cut(s) 260, 945
StyI CCWWGG 2 cut(s) 61, 490
TaaI ACNGT 3 cut(s) 131, 355, 1141
TaqI TCGA 2 cut(s) 750, 1263
TasI AATT 6 cut(s) 80, 542, 665, 752, 891, 954
TfiI GAWTC 1 cut(s) 1245
Tru1I TTAA 3 cut(s) 165, 290, 1119
Tru9I TTAA 3 cut(s) 165, 290, 1119
TscAI CASTG 8 cut(s) 49, 126, 136, 349, 360, 856, 1146, 1164
TseFI GTSAC 1 cut(s) 847
TseI GCWGC 5 cut(s) 616, 641, 757, 968, 1077
Tsp45I GTSAC 1 cut(s) 847
TspDTI ATGAA 2 cut(s) 703, 798
TspGWI ACGGA 1 cut(s) 756
TspRI CASTG 8 cut(s) 49, 126, 136, 349, 360, 856, 1146, 1164
Van91I CCANNNNNTGG 1 cut(s) 959
VneI GTGCAC 1 cut(s) 56
VpaK11BI GGWCC 5 cut(s) 69, 189, 347, 487, 1069
XapI RAATTY 1 cut(s) 542
XceI RCATGY 1 cut(s) 980
XspI CTAG 3 cut(s) 75, 587, 1154
Zsp2I ATGCAT 1 cut(s) 904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.