Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0016363

Physical Location & Seq

Genomic Coordinates Reverse (-)

38719664 .. 38723106

Gene Structure 3443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00416850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1296 bp

ATGGATTCAAACAAAGAACACCTCTTGGAAAATGGCAACTTGAAGAGCACGAGTAGTAACGAGGAGGAGGTTCACCATGGCATGACTGCTAGACGATTGTCATCTTCTTCGCTGCAAAACAAGTCGGTTCCTACACTACTACCTTTTAGTGTGCAAAATGGGAAGGTTAGGAAGGTACTCATCAATTTTCAGGTTGTTCTTTTGGGGACCAGGCTTTCGGTACTCCTTCCCACCATTCCTCTATCCTTTGTTGCTGTCTACTGTGGCTTTGGAAAGGCCTGGGTTTTTTCTATGAGCTTGCTTGGACTAACCTTACTCGCTGAGCGAGTCAGCTTTCTCACAGAACAAGTATCATACTACACTGGTCCAACAGTGGGAGGGCTTCTAAATGCAACATTCGGAAATGCCACAGAGCTAATTATCGCAATTTCAGCTCTAAGTCAAAACAAATTGCAGTTGCTCAAGTACTCTCTCTTGGGTTCAGTTCTTTCAAATCTTCTTTTAGTCCTCGGGACGTCGCTTTTCTGTGGTGGCCTTGCCAACCTTAGAAGTGAGCAAAAATTCGAAAGAAGGCAGGCCCATGTGAACTCGCTCCTTCTAATGCTAGGTGCATTCTGTCACATGCTGCCTATGTTGCTTCCATATGCCGGGGACTCTACTGTAACAGAAGGCCAAACACTCGAGCTATCAAGGGCCCTTTGTATCATTATGCTGCTTTCATATGCTACATACCTGTTCTTCCAGTTATGGACTCACCGCACATTTTTCGAATCACTCGAAGAATCAAATGATGAGGATGAGGATGATGATGTGGCTGTAGTAGGTTTCTGGAGTGGATTTGTTTGGTTATTTGTTGTTACAATCACCACAGCTTGGTTGTCTGAGTATGTGGTTGGCACAATTGAGGATGCATCAAAATCTTGGGGTTTGTCTGTGAGCTTCCTCAGCCTCATCTTGGTTCCAATTCTTGGAAATACAGCTGAGCATGCAGGTTCAATCATATTTGCTCTTAAAAACAAGTTGGATATATCTTTAGGAATCTCTTTGGGATCTGCAACTCAGATCCTTATGTTCGTGGTGCCATCGTGCGTTGTAGTTGCTTGGATAATGGGCATTAACATGGATATTAACTTCAATCTCATCGAGACGGTGTCTCTTGCTCTAGCAGTGATCACCACATCAATTGCTTTACAGGATGGAACTTCCCATTATGTGAAAGGATTGGTTCTTATTCTCTGCTACATTGTTATTGGGATCTGCTTTTTTATATTCGAAACACCAATGGATGACAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006793 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006882 GO:0008150 GO:0008152 GO:0008324 GO:0009605 GO:0009607 GO:0009624 GO:0009705 GO:0009987 GO:0010035 GO:0010038 GO:0015075 GO:0015077 GO:0015078 GO:0015085 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015368 GO:0015369 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030026 GO:0031090 GO:0034220 GO:0042221 GO:0042592 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046916 GO:0048878 GO:0050801 GO:0050896 GO:0051139 GO:0051179 GO:0051234 GO:0051592 GO:0051704 GO:0051707 GO:0055062 GO:0055065 GO:0055069 GO:0055071 GO:0055074 GO:0055076 GO:0055080 GO:0055081 GO:0055082 GO:0055083 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0072503 GO:0072505 GO:0072506 GO:0072507 GO:0072511 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805 GO:0099516 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_Ca_ex

Protein Analysis

431

Amino Acids

47.21

Weight (kDa)

5.11

Isoelectric Point (pI)

35.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_Ca_ex	PF01699	93 - 250	6.7e-20	Sodium/calcium exchanger protein
Na_Ca_ex	PF01699	279 - 417	5.9e-19	Sodium/calcium exchanger protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016363)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g11490
malus_domestica	MD04G1151900.v1.1
prunus_persica	Prupe.6G277000_v2.0.a1
pyrus_communis	pycom04g13790
rosa_chinensis	RchiOBHm_Chr3g0463181
rosa_laevigata	RLG00000024805
rosa_roxburghii	Rroxscaffold_6G00416850 Rroxscaffold_6G00416870
rosa_rugosa	Rorug03G0062100.1
rosa_samantha	Rh3AG120300 Rh3BG124700 Rh3CG126700 Rh3DG125700
rosa_wichuraiana	Rw3G010180 Rw3G010210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	518
Acc36I	ACCTGC	1 cut(s)	980
AccB1I	GGYRCC	1 cut(s)	1078
AccB7I	CCANNNNNTGG	2 cut(s)	873, 968
AccI	GTMKAC	1 cut(s)	258
AciI	CCGC	1 cut(s)	757
AclWI	GGATC	3 cut(s)	1057, 1057, 1262
AcsI	RAATTY	1 cut(s)	560
AcyI	GRCGYC	1 cut(s)	515
AfaI	GTAC	3 cut(s)	177, 222, 467
AfiI	CCNNNNNNNGG	5 cut(s)	374, 647, 873, 955, 968
AgsI	TTSAA	5 cut(s)	9, 43, 492, 996, 1135
AjnI	CCWGG	2 cut(s)	209, 278
AluBI	AGCT	8 cut(s)	297, 333, 415, 434, 685, 872, 939, 980
AluI	AGCT	8 cut(s)	297, 333, 415, 434, 685, 872, 939, 980
Alw21I	GWGCWC	1 cut(s)	50
Alw26I	GTCTC	2 cut(s)	1139, 1158
AlwI	GGATC	3 cut(s)	1057, 1057, 1262
Ama87I	CYCGRG	2 cut(s)	509, 680
AoxI	GGCC	5 cut(s)	276, 532, 576, 670, 693
ApaI	GGGCCC	1 cut(s)	697
ApeKI	GCWGC	3 cut(s)	112, 625, 712
ApoI	RAATTY	1 cut(s)	560
ArsI	GACNNNNNNTTYG	2 cut(s)	199, 231
AspS9I	GGNCC	5 cut(s)	207, 365, 577, 693, 694
AsuC2I	CCSGG	1 cut(s)	649
AsuHPI	GGTGA	4 cut(s)	65, 746, 856, 1165
AsuII	TTCGAA	3 cut(s)	564, 768, 1272
AvaI	CYCGRG	2 cut(s)	509, 680
AvaII	GGWCC	2 cut(s)	207, 365
BaeGI	GKGCMC	1 cut(s)	697
BanI	GGYRCC	1 cut(s)	1078
BanII	GRGCYC	1 cut(s)	697
BauI	CACGAG	1 cut(s)	49
Bbv12I	GWGCWC	1 cut(s)	50
BbvCI	CCTCAGC	1 cut(s)	944
BbvI	GCAGC	3 cut(s)	99, 612, 699
BccI	CCATC	2 cut(s)	1090, 1190
BcgI	CGANNNNNNTGC	2 cut(s)	748, 782
BciT130I	CCWGG	2 cut(s)	211, 280
BclI	TGATCA	1 cut(s)	1170
BcnI	CCSGG	1 cut(s)	649
BcoDI	GTCTC	2 cut(s)	1139, 1158
BfaI	CTAG	4 cut(s)	90, 605, 1163, 1294
BfmI	CTRYAG	1 cut(s)	816
BfuAI	ACCTGC	1 cut(s)	980
BisI	GCNGC	3 cut(s)	113, 626, 713
BlpI	GCTNAGC	2 cut(s)	321, 981
BlsI	GCNGC	3 cut(s)	114, 627, 714
BmcAI	AGTACT	1 cut(s)	467
Bme1390I	CCNGG	3 cut(s)	211, 280, 649
Bme18I	GGWCC	2 cut(s)	207, 365
BmeT110I	CYCGRG	2 cut(s)	509, 680
BmgT120I	GGNCC	5 cut(s)	207, 365, 577, 693, 694
BmiI	GGNNCC	5 cut(s)	129, 208, 695, 960, 1080
BmrFI	CCNGG	3 cut(s)	211, 280, 649
BmsI	GCATC	2 cut(s)	898, 920
BoxI	GACNNNNGTC	1 cut(s)	97
BpmI	CTGGAG	1 cut(s)	850
Bpu10I	CCTNAGC	1 cut(s)	944
Bpu1102I	GCTNAGC	2 cut(s)	321, 981
Bpu14I	TTCGAA	3 cut(s)	564, 768, 1272
BpuEI	CTTGAG	1 cut(s)	446
BpuMI	CCSGG	1 cut(s)	649
BsaBI	GATNNNNATC	1 cut(s)	100
BsaHI	GRCGYC	1 cut(s)	515
BsaJI	CCNNGG	4 cut(s)	76, 279, 508, 648
Bsc4I	CCNNNNNNNGG	5 cut(s)	374, 647, 873, 955, 968
Bse1I	ACTGG	2 cut(s)	367, 742
Bse8I	GATNNNNATC	1 cut(s)	100
BseBI	CCWGG	2 cut(s)	211, 280
BseDI	CCNNGG	4 cut(s)	76, 279, 508, 648
BseGI	GGATG	5 cut(s)	802, 808, 913, 1201, 1291
BseJI	GATNNNNATC	1 cut(s)	100
BseLI	CCNNNNNNNGG	5 cut(s)	374, 647, 873, 955, 968
BseMII	CTCAG	5 cut(s)	312, 873, 958, 972, 1073
BseNI	ACTGG	2 cut(s)	367, 742
BseRI	GAGGAG	2 cut(s)	77, 80
BseSI	GKGCMC	1 cut(s)	697
BseXI	GCAGC	3 cut(s)	99, 612, 699
BshFI	GGCC	5 cut(s)	278, 534, 578, 672, 695
BshNI	GGYRCC	1 cut(s)	1078
BsiHKAI	GWGCWC	1 cut(s)	50
BsiHKCI	CYCGRG	2 cut(s)	509, 680
BsiSI	CCGG	1 cut(s)	648
BslFI	GGGAC	3 cut(s)	220, 526, 665
BslI	CCNNNNNNNGG	5 cut(s)	374, 647, 873, 955, 968
BsmAI	GTCTC	2 cut(s)	1139, 1158
BsmBI	CGTCTC	1 cut(s)	1139
BsmFI	GGGAC	3 cut(s)	220, 526, 665
BsmI	GAATGC	1 cut(s)	611
BsnI	GGCC	5 cut(s)	278, 534, 578, 672, 695
BsoBI	CYCGRG	2 cut(s)	509, 680
Bsp119I	TTCGAA	3 cut(s)	564, 768, 1272
Bsp120I	GGGCCC	1 cut(s)	693
Bsp1286I	GDGCHC	2 cut(s)	50, 697
Bsp143I	GATC	4 cut(s)	1049, 1062, 1170, 1254
Bsp1720I	GCTNAGC	2 cut(s)	321, 981
Bsp19I	CCATGG	1 cut(s)	76
BspACI	CCGC	1 cut(s)	757
BspANI	GGCC	5 cut(s)	278, 534, 578, 672, 695
BspCNI	CTCAG	5 cut(s)	313, 874, 957, 973, 1072
BspLI	GGNNCC	5 cut(s)	129, 208, 695, 960, 1080
BspMI	ACCTGC	1 cut(s)	980
BspPI	GGATC	3 cut(s)	1057, 1057, 1262
BspQI	GCTCTTC	1 cut(s)	38
BspT104I	TTCGAA	3 cut(s)	564, 768, 1272
BspT107I	GGYRCC	1 cut(s)	1078
BsrI	ACTGG	2 cut(s)	367, 742
BssECI	CCNNGG	4 cut(s)	76, 279, 508, 648
BssMI	GATC	4 cut(s)	1049, 1062, 1170, 1254
BssNI	GRCGYC	1 cut(s)	515
BssSI	CACGAG	1 cut(s)	49
BssT1I	CCWWGG	1 cut(s)	76
Bst2BI	CACGAG	1 cut(s)	49
Bst2UI	CCWGG	2 cut(s)	211, 280
Bst4CI	ACNGT	4 cut(s)	263, 373, 661, 1150
Bst6I	CTCTTC	1 cut(s)	38
BstACI	GRCGYC	1 cut(s)	515
BstBI	TTCGAA	3 cut(s)	564, 768, 1272
BstC8I	GCNNGC	3 cut(s)	299, 576, 987
BstDEI	CTNAG	7 cut(s)	321, 437, 545, 882, 944, 981, 1059
BstDSI	CCRYGG	1 cut(s)	76
BstF5I	GGATG	5 cut(s)	802, 808, 913, 1201, 1291
BstKTI	GATC	4 cut(s)	1052, 1065, 1173, 1257
BstMAI	GTCTC	2 cut(s)	1139, 1158
BstMBI	GATC	4 cut(s)	1049, 1062, 1170, 1254
BstMWI	GCNNNNNNNGC	4 cut(s)	431, 634, 945, 986
BstNI	CCWGG	2 cut(s)	211, 280
BstNSI	RCATGY	2 cut(s)	625, 989
BstPAI	GACNNNNGTC	1 cut(s)	97
BstSCI	CCNGG	3 cut(s)	209, 278, 647
BstSFI	CTRYAG	1 cut(s)	816
BstSLI	GKGCMC	1 cut(s)	697
BstV1I	GCAGC	3 cut(s)	99, 612, 699
BstX2I	RGATCY	3 cut(s)	1049, 1062, 1254
BstYI	RGATCY	3 cut(s)	1049, 1062, 1254
BsuRI	GGCC	5 cut(s)	278, 534, 578, 672, 695
BtgI	CCRYGG	1 cut(s)	76
BtsCI	GGATG	5 cut(s)	802, 808, 913, 1201, 1291
BtsI	GCAGTG	1 cut(s)	1173
BtsIMutI	CAGTG	3 cut(s)	360, 378, 1173
BveI	ACCTGC	1 cut(s)	980
Cac8I	GCNNGC	3 cut(s)	299, 576, 987
Cfr13I	GGNCC	5 cut(s)	207, 365, 577, 693, 694
Csp6I	GTAC	3 cut(s)	176, 221, 466
CspCI	CAANNNNNGTGG	2 cut(s)	1165, 1200
CviAII	CATG	6 cut(s)	77, 82, 581, 622, 986, 1120
CviQI	GTAC	3 cut(s)	176, 221, 466
DdeI	CTNAG	7 cut(s)	321, 437, 545, 882, 944, 981, 1059
DpnI	GATC	4 cut(s)	1051, 1064, 1172, 1256
DpnII	GATC	4 cut(s)	1049, 1062, 1170, 1254
Eam1104I	CTCTTC	1 cut(s)	38
EarI	CTCTTC	1 cut(s)	38
Eco130I	CCWWGG	1 cut(s)	76
Eco147I	AGGCCT	1 cut(s)	278
Eco24I	GRGCYC	1 cut(s)	697
Eco47I	GGWCC	2 cut(s)	207, 365
Eco88I	CYCGRG	2 cut(s)	509, 680
EcoO109I	RGGNCCY	2 cut(s)	693, 694
EcoRII	CCWGG	2 cut(s)	209, 278
EcoT14I	CCWWGG	1 cut(s)	76
EcoT22I	ATGCAT	1 cut(s)	913
EcoT38I	GRGCYC	1 cut(s)	697
ErhI	CCWWGG	1 cut(s)	76
Esp3I	CGTCTC	1 cut(s)	1139
FaeI	CATG	6 cut(s)	80, 85, 584, 625, 989, 1123
FaqI	GGGAC	3 cut(s)	220, 526, 665
FatI	CATG	6 cut(s)	76, 81, 580, 621, 985, 1119
FauNDI	CATATG	2 cut(s)	643, 721
FbaI	TGATCA	1 cut(s)	1170
FblI	GTMKAC	1 cut(s)	258
Fnu4HI	GCNGC	3 cut(s)	113, 626, 713
FokI	GGATG	4 cut(s)	809, 815, 920, 1208
FriOI	GRGCYC	1 cut(s)	697
Fsp4HI	GCNGC	3 cut(s)	113, 626, 713
FspBI	CTAG	4 cut(s)	90, 605, 1163, 1294
GluI	GCNGC	3 cut(s)	113, 626, 713
GsuI	CTGGAG	1 cut(s)	850
HaeIII	GGCC	5 cut(s)	278, 534, 578, 672, 695
HapII	CCGG	1 cut(s)	648
Hin1I	GRCGYC	1 cut(s)	515
Hin1II	CATG	6 cut(s)	80, 85, 584, 625, 989, 1123
HinfI	GANTC	7 cut(s)	5, 327, 653, 751, 770, 782, 1038
HpaII	CCGG	1 cut(s)	648
HphI	GGTGA	4 cut(s)	65, 746, 856, 1165
Hpy166II	GTNNAC	3 cut(s)	73, 259, 586
Hpy188I	TCNGA	3 cut(s)	401, 883, 1062
Hpy188III	TCNNGA	3 cut(s)	511, 829, 1144
Hpy8I	GTNNAC	3 cut(s)	73, 259, 586
Hpy99I	CGWCG	1 cut(s)	520
HpyAV	CCTTC	6 cut(s)	157, 166, 236, 564, 605, 662
HpyCH4III	ACNGT	4 cut(s)	263, 373, 661, 1150
HpyCH4IV	ACGT	1 cut(s)	515
HpyCH4V	TGCA	8 cut(s)	115, 154, 392, 454, 611, 911, 989, 1055
HpyF10VI	GCNNNNNNNGC	4 cut(s)	431, 634, 945, 986
HpyF3I	CTNAG	7 cut(s)	321, 437, 545, 882, 944, 981, 1059
HpySE526I	ACGT	1 cut(s)	515
Hsp92I	GRCGYC	1 cut(s)	515
Hsp92II	CATG	6 cut(s)	80, 85, 584, 625, 989, 1123
Ksp22I	TGATCA	1 cut(s)	1170
Kzo9I	GATC	4 cut(s)	1049, 1062, 1170, 1254
LguI	GCTCTTC	1 cut(s)	38
LmnI	GCTCC	1 cut(s)	597
Lsp1109I	GCAGC	3 cut(s)	99, 612, 699
LweI	GCATC	2 cut(s)	898, 920
MaeI	CTAG	4 cut(s)	90, 605, 1163, 1294
MaeII	ACGT	1 cut(s)	515
MaeIII	GTNAC	4 cut(s)	56, 617, 661, 856
MalI	GATC	4 cut(s)	1051, 1064, 1172, 1256
MboI	GATC	4 cut(s)	1049, 1062, 1170, 1254
MboII	GAAGA	6 cut(s)	55, 96, 99, 488, 730, 791
MfeI	CAATTG	2 cut(s)	900, 1182
MflI	RGATCY	3 cut(s)	1049, 1062, 1254
MhlI	GDGCHC	2 cut(s)	50, 697
MluCI	AATT	8 cut(s)	184, 417, 426, 449, 560, 900, 963, 1182
MlyI	GAGTC	3 cut(s)	336, 647, 745
MmeI	TCCRAC	2 cut(s)	392, 1002
Mph1103I	ATGCAT	1 cut(s)	913
MseI	TTAA	3 cut(s)	1011, 1116, 1128
MslI	CAYNNNNRTG	1 cut(s)	1118
MspA1I	CMGCKG	1 cut(s)	980
MspI	CCGG	1 cut(s)	648
MspR9I	CCNGG	3 cut(s)	211, 280, 649
MunI	CAATTG	2 cut(s)	900, 1182
Mva1269I	GAATGC	1 cut(s)	611
MvaI	CCWGG	2 cut(s)	211, 280
MwoI	GCNNNNNNNGC	4 cut(s)	431, 634, 945, 986
NciI	CCSGG	1 cut(s)	649
NcoI	CCATGG	1 cut(s)	76
NdeI	CATATG	2 cut(s)	643, 721
NdeII	GATC	4 cut(s)	1049, 1062, 1170, 1254
NlaIII	CATG	6 cut(s)	80, 85, 584, 625, 989, 1123
NlaIV	GGNNCC	5 cut(s)	129, 208, 695, 960, 1080
NmuCI	GTSAC	1 cut(s)	617
NsiI	ATGCAT	1 cut(s)	913
NspI	RCATGY	2 cut(s)	625, 989
NspV	TTCGAA	3 cut(s)	564, 768, 1272
PaeI	GCATGC	1 cut(s)	989
PaeR7I	CTCGAG	1 cut(s)	680
PceI	AGGCCT	1 cut(s)	278
PciSI	GCTCTTC	1 cut(s)	38
PcsI	WCGNNNNNNNCGW	1 cut(s)	774
PctI	GAATGC	1 cut(s)	611
PfeI	GAWTC	4 cut(s)	5, 770, 782, 1038
PflFI	GACNNNGTC	1 cut(s)	1150
PflMI	CCANNNNNTGG	2 cut(s)	873, 968
PkrI	GCNGC	3 cut(s)	114, 627, 714
PleI	GAGTC	3 cut(s)	335, 647, 745
PpsI	GAGTC	3 cut(s)	335, 647, 745
PshAI	GACNNNNGTC	1 cut(s)	97
Psp6I	CCWGG	2 cut(s)	209, 278
PspGI	CCWGG	2 cut(s)	209, 278
PspN4I	GGNNCC	5 cut(s)	129, 208, 695, 960, 1080
PspOMI	GGGCCC	1 cut(s)	693
PspPI	GGNCC	5 cut(s)	207, 365, 577, 693, 694
PspXI	VCTCGAGB	1 cut(s)	680
PsuI	RGATCY	3 cut(s)	1049, 1062, 1254
PsyI	GACNNNGTC	1 cut(s)	1150
PvuII	CAGCTG	1 cut(s)	980
RsaI	GTAC	3 cut(s)	177, 222, 467
RsaNI	GTAC	3 cut(s)	176, 221, 466
RseI	CAYNNNNRTG	1 cut(s)	1118
SapI	GCTCTTC	1 cut(s)	38
SaqAI	TTAA	3 cut(s)	1011, 1116, 1128
SatI	GCNGC	3 cut(s)	113, 626, 713
Sau3AI	GATC	4 cut(s)	1049, 1062, 1170, 1254
Sau96I	GGNCC	5 cut(s)	207, 365, 577, 693, 694
ScaI	AGTACT	1 cut(s)	467
SchI	GAGTC	3 cut(s)	336, 647, 745
ScrFI	CCNGG	3 cut(s)	211, 280, 649
SduI	GDGCHC	2 cut(s)	50, 697
SfaNI	GCATC	2 cut(s)	898, 920
SfcI	CTRYAG	1 cut(s)	816
Sfr274I	CTCGAG	1 cut(s)	680
SfuI	TTCGAA	3 cut(s)	564, 768, 1272
SinI	GGWCC	2 cut(s)	207, 365
SlaI	CTCGAG	1 cut(s)	680
SmiMI	CAYNNNNRTG	1 cut(s)	1118
SmlI	CTYRAG	2 cut(s)	461, 680
SmoI	CTYRAG	2 cut(s)	461, 680
SphI	GCATGC	1 cut(s)	989
Sse9I	AATT	8 cut(s)	184, 417, 426, 449, 560, 900, 963, 1182
SseBI	AGGCCT	1 cut(s)	278
SsiI	CCGC	1 cut(s)	757
SspMI	CTAG	4 cut(s)	90, 605, 1163, 1294
StuI	AGGCCT	1 cut(s)	278
StyD4I	CCNGG	3 cut(s)	209, 278, 647
StyI	CCWWGG	1 cut(s)	76
TaaI	ACNGT	4 cut(s)	263, 373, 661, 1150
TaiI	ACGT	1 cut(s)	518
TaqI	TCGA	6 cut(s)	564, 681, 768, 777, 1143, 1272
TasI	AATT	8 cut(s)	184, 417, 426, 449, 560, 900, 963, 1182
TatI	WGTACW	1 cut(s)	465
TfiI	GAWTC	4 cut(s)	5, 770, 782, 1038
Tru1I	TTAA	3 cut(s)	1011, 1116, 1128
Tru9I	TTAA	3 cut(s)	1011, 1116, 1128
TscAI	CASTG	3 cut(s)	367, 378, 1173
TseFI	GTSAC	1 cut(s)	617
TseI	GCWGC	3 cut(s)	112, 625, 712
Tsp45I	GTSAC	1 cut(s)	617
TspDTI	ATGAA	1 cut(s)	708
TspRI	CASTG	3 cut(s)	367, 378, 1173
Tth111I	GACNNNGTC	1 cut(s)	1150
Van91I	CCANNNNNTGG	2 cut(s)	873, 968
VpaK11BI	GGWCC	2 cut(s)	207, 365
XapI	RAATTY	1 cut(s)	560
XceI	RCATGY	2 cut(s)	625, 989
XhoI	CTCGAG	1 cut(s)	680
XmiI	GTMKAC	1 cut(s)	258
XspI	CTAG	4 cut(s)	90, 605, 1163, 1294
ZraI	GACGTC	1 cut(s)	516
ZrmI	AGTACT	1 cut(s)	467
Zsp2I	ATGCAT	1 cut(s)	913

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.