Prupe.6G314000_v2.0.a1

Alkaline neutral invertase CINV2-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
28061726 .. 28064959
3234 bp
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UTR
Exon/CDS
Intron
Prupe.6G314000.1

Sequence Viewer

Length: 393 bp
ATGTTGTCGGATATATTTCTGAATGTAATTTGGGAAAGCGTGCCAAATGGTTGTGCTATTCATTATATTTTGATGCTTGTTCACAGAATTCTGACTTATGTGTTTGTTCTAAAACAATTGGTTAATGATGTTGCAACGGGGAGGCCTCAGACTGCTAAGAGAGCAATTGAACGAGTGGAGCATCGGCTCTCAAAAGATGGGTGGCCAGAATACTATGACGGCAAGGCAGGGAGATATGTCAGGAAGCAAGCGAGGAAGTACCAGACCTGGAGCATCTCAGGATATCTGGTAGCTAAACTGATGATCGAGAACCCAACCAATCTTTCACTGATCCCTCTTGAAGAGGACAAGAAGATAGCCAAGCCAAGGCTCACCCGCTTCACTTCCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

131

Amino Acids

15.14

Weight (kDa)

9.75

Isoelectric Point (pI)

34.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 376
AclWI GGATC 1 cut(s) 325
AcoI YGGCCR 1 cut(s) 203
AcsI RAATTY 1 cut(s) 87
AfaI GTAC 1 cut(s) 260
AfiI CCNNNNNNNGG 1 cut(s) 366
AgsI TTSAA 2 cut(s) 170, 341
AjnI CCWGG 1 cut(s) 266
AjuI GAANNNNNNNTTGG 2 cut(s) 307, 339
AluBI AGCT 1 cut(s) 293
AluI AGCT 1 cut(s) 293
AlwI GGATC 1 cut(s) 325
AoxI GGCC 2 cut(s) 143, 203
ApoI RAATTY 1 cut(s) 87
AsuHPI GGTGA 1 cut(s) 364
BalI TGGCCA 1 cut(s) 205
BccI CCATC 1 cut(s) 191
BceAI ACGGC 1 cut(s) 235
BciT130I CCWGG 1 cut(s) 268
Bme1390I CCNGG 1 cut(s) 268
BmrFI CCNGG 1 cut(s) 268
BmsI GCATC 3 cut(s) 63, 190, 282
BpmI CTGGAG 1 cut(s) 289
BsaJI CCNNGG 1 cut(s) 365
Bsc4I CCNNNNNNNGG 1 cut(s) 366
BseBI CCWGG 1 cut(s) 268
BseDI CCNNGG 1 cut(s) 365
BseLI CCNNNNNNNGG 1 cut(s) 366
BseMII CTCAG 2 cut(s) 161, 291
BshFI GGCC 2 cut(s) 145, 205
BslI CCNNNNNNNGG 1 cut(s) 366
BsnI GGCC 2 cut(s) 145, 205
Bsp143I GATC 2 cut(s) 303, 330
BspACI CCGC 1 cut(s) 376
BspANI GGCC 2 cut(s) 145, 205
BspCNI CTCAG 2 cut(s) 160, 290
BspPI GGATC 1 cut(s) 325
BssECI CCNNGG 1 cut(s) 365
BssMI GATC 2 cut(s) 303, 330
BssT1I CCWWGG 1 cut(s) 365
Bst2UI CCWGG 1 cut(s) 268
Bst6I CTCTTC 1 cut(s) 336
BstC8I GCNNGC 2 cut(s) 41, 249
BstDEI CTNAG 3 cut(s) 147, 156, 277
BstKTI GATC 2 cut(s) 306, 333
BstMBI GATC 2 cut(s) 303, 330
BstMWI GCNNNNNNNGC 1 cut(s) 161
BstNI CCWGG 1 cut(s) 268
BstSCI CCNGG 1 cut(s) 266
BsuRI GGCC 2 cut(s) 145, 205
BtsIMutI CAGTG 1 cut(s) 326
Cac8I GCNNGC 2 cut(s) 41, 249
Csp6I GTAC 1 cut(s) 259
CviJI RGCY 7 cut(s) 145, 187, 205, 293, 359, 364, 370
CviKI_1 RGCY 7 cut(s) 145, 187, 205, 293, 359, 364, 370
CviQI GTAC 1 cut(s) 259
DdeI CTNAG 3 cut(s) 147, 156, 277
DpnI GATC 2 cut(s) 305, 332
DpnII GATC 2 cut(s) 303, 330
EaeI YGGCCR 1 cut(s) 203
Eam1104I CTCTTC 1 cut(s) 336
EarI CTCTTC 1 cut(s) 336
Eco130I CCWWGG 1 cut(s) 365
Eco147I AGGCCT 1 cut(s) 145
Eco32I GATATC 1 cut(s) 284
EcoRI GAATTC 1 cut(s) 87
EcoRII CCWGG 1 cut(s) 266
EcoRV GATATC 1 cut(s) 284
EcoT14I CCWWGG 1 cut(s) 365
ErhI CCWWGG 1 cut(s) 365
FaiI YATR 5 cut(s) 14, 66, 99, 216, 237
FauI CCCGC 1 cut(s) 383
GsuI CTGGAG 1 cut(s) 289
HaeIII GGCC 2 cut(s) 145, 205
HphI GGTGA 1 cut(s) 364
Hpy166II GTNNAC 1 cut(s) 82
Hpy188I TCNGA 4 cut(s) 10, 21, 93, 150
Hpy188III TCNNGA 4 cut(s) 241, 279, 307, 338
Hpy8I GTNNAC 1 cut(s) 82
HpyCH4V TGCA 1 cut(s) 134
HpyF10VI GCNNNNNNNGC 1 cut(s) 161
HpyF3I CTNAG 3 cut(s) 147, 156, 277
Kzo9I GATC 2 cut(s) 303, 330
LmnI GCTCC 2 cut(s) 178, 270
LpnPI CCDG 8 cut(s) 213, 219, 226, 253, 264, 272, 275, 280
LweI GCATC 3 cut(s) 63, 190, 282
MalI GATC 2 cut(s) 305, 332
MboI GATC 2 cut(s) 303, 330
MboII GAAGA 2 cut(s) 353, 364
MfeI CAATTG 2 cut(s) 116, 165
MlsI TGGCCA 1 cut(s) 205
MluCI AATT 4 cut(s) 27, 87, 116, 165
MluNI TGGCCA 1 cut(s) 205
MnlI CCTC 5 cut(s) 135, 156, 246, 337, 345
Mox20I TGGCCA 1 cut(s) 205
MscI TGGCCA 1 cut(s) 205
MseI TTAA 1 cut(s) 123
Msp20I TGGCCA 1 cut(s) 205
MspR9I CCNGG 1 cut(s) 268
MunI CAATTG 2 cut(s) 116, 165
MvaI CCWGG 1 cut(s) 268
MwoI GCNNNNNNNGC 1 cut(s) 161
NdeII GATC 2 cut(s) 303, 330
PceI AGGCCT 1 cut(s) 145
Psp6I CCWGG 1 cut(s) 266
PspGI CCWGG 1 cut(s) 266
RsaI GTAC 1 cut(s) 260
RsaNI GTAC 1 cut(s) 259
SaqAI TTAA 1 cut(s) 123
Sau3AI GATC 2 cut(s) 303, 330
ScrFI CCNGG 1 cut(s) 268
SetI ASST 2 cut(s) 269, 295
SfaNI GCATC 3 cut(s) 63, 190, 282
Sse9I AATT 4 cut(s) 27, 87, 116, 165
SseBI AGGCCT 1 cut(s) 145
SsiI CCGC 1 cut(s) 376
StuI AGGCCT 1 cut(s) 145
StyD4I CCNGG 1 cut(s) 266
StyI CCWWGG 1 cut(s) 365
TaqI TCGA 1 cut(s) 306
TasI AATT 4 cut(s) 27, 87, 116, 165
Tru1I TTAA 1 cut(s) 123
Tru9I TTAA 1 cut(s) 123
TscAI CASTG 1 cut(s) 333
TspDTI ATGAA 1 cut(s) 50
TspRI CASTG 1 cut(s) 333
XapI RAATTY 1 cut(s) 87
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.