Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0009621

Physical Location & Seq

Genomic Coordinates Reverse (-)

28656050 .. 28658827

Gene Structure 2778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G325900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1050 bp

ATGGCTTCCACATCCCCAAACTGCTTGTTTTACTTCTGCTCCCCTTCTTCAATATCCAACTCAACCTCAACCTCAACCACACAATTGCCCTTATCTTATTCTCACTCTATCTTTAATGGGTGCAATGGGATTTCACTCACCAAAGCTTGGCCTTCTAGCTCATCAAGAATTTGTGCCAAGTTTGAACAGTTCCAAGGTGAGCCTCCCCAGGACAATCTTGAAGATACAACACCACCAACCCTAGAAGCATTTGAAGAAGATGGTGAACAGGAGGAAGAAGATGACAGCTGCTTGCCTTCTGACTTGGAGGGTGCAGTCCGGCAATCGGGTGAAGCAAGTGCAACATTTGTGTCTTCAGGAGGATTGAGAGCCATAGTTGAGCTTTTAATCCCCCAGCTGCAATTTCTTGATGAAGAAGGTGCACAAGCTGAGCTCTGGGAATTGTCAAGGGTTTTCTTGGATACGCTTATTGAAGAAACTGGTGGTCAGAGAGTTAAAGCCATATTTCCTGATGCTGGTGCCGCAGCACTTCTAAAATACCGGTGGAAAGATGCTGCTTTTGGATTCTCCAGCTTAAGTGACCGAAAGCCGGTACAGAGTGAAGATGAGATTGTGGTTATGGTTGTTCCTGATTATCAGATGTTGGAATATGTAGAGAAGCTTGCATCTACTCTCTCAGATGATCCGCCAAGGCCTCTCATCATGTGGAATCCCCGTCTCATCAGTGAGGATGTTGGAGTTGGATTTAATGTTCGAAAGCTAAGGCGGTACTTTCTGAGCACTTTTACAACGGTATACTCAATGAGGCCTATGCAGTCTGGTGCTGTCTTTAGGTGCTATCCAGGGTCATGGAAGGTGTTCTATGATGACAAGGATAGACCAAACAGATATCTGCTTGCCAAAGAGCTCATTAGGCGCCCGGATGCCGAAGAACTTGAGATGATATTTGGAAATGTAGACGAGAAGTCAGAGCAGGGCCAATCTTTGTTTGATCAAGCGGCAGGGATCTTCTCTTCACTAAATCGATTTATGAGGGTCATTTCAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1995

Protein Analysis

350

Amino Acids

39.12

Weight (kDa)

4.57

Isoelectric Point (pI)

52.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009621)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G27560 AT5G27560 AT5G27560 AT5G27560
fragaria_vesca	FvH4_6g05840 FvH4_6g05840
malus_domestica	MD12G1219300.v1.1
prunus_persica	Prupe.6G325900_v2.0.a1 Prupe.6G325900_v2.0.a1
pyrus_communis	pycom12g20480
rosa_chinensis	RchiOBHm_Chr3g0454751
rosa_laevigata	RLG00000025418
rosa_multiflora	Rmu_sc0001792.1_g000020 Rmu_sc0003140.1_g000020 Rmu_sc0034629.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424790
rosa_rugosa	Rorug03G0002200
rosa_samantha	Rh3AG062200 Rh3BG064100 Rh3CG063000 Rh3DG063800
rosa_wichuraiana	Rw3G004840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	518, 915
AccB7I	CCANNNNNTGG	1 cut(s)	147
AccI	GTMKAC	2 cut(s)	795, 957
AciI	CCGC	4 cut(s)	522, 686, 766, 998
AclWI	GGATC	2 cut(s)	677, 1013
AcsI	RAATTY	1 cut(s)	168
AcuI	CTGAAG	1 cut(s)	339
AcyI	GRCGYC	1 cut(s)	916
AfaI	GTAC	2 cut(s)	594, 770
AfiI	CCNNNNNNNGG	4 cut(s)	147, 325, 515, 589
AflII	CTTAAG	1 cut(s)	574
AgeI	ACCGGT	1 cut(s)	540
AgsI	TTSAA	6 cut(s)	51, 185, 221, 254, 473, 1044
AhdI	GACNNNNNGTC	1 cut(s)	964
AjnI	CCWGG	2 cut(s)	207, 841
AloI	GAACNNNNNNTCC	2 cut(s)	735, 767
Alw21I	GWGCWC	4 cut(s)	424, 435, 782, 909
Alw26I	GTCTC	1 cut(s)	722
Alw44I	GTGCAC	1 cut(s)	420
AlwI	GGATC	2 cut(s)	677, 1013
AoxI	GGCC	4 cut(s)	149, 692, 806, 976
ApaLI	GTGCAC	1 cut(s)	420
ApeKI	GCWGC	4 cut(s)	288, 397, 524, 554
ApoI	RAATTY	1 cut(s)	168
AsiGI	ACCGGT	1 cut(s)	540
Asp700I	GAANNNNTTC	1 cut(s)	857
AspLEI	GCGC	1 cut(s)	918
AspS9I	GGNCC	1 cut(s)	976
AsuC2I	CCSGG	1 cut(s)	920
AsuHPI	GGTGA	4 cut(s)	130, 209, 275, 341
AsuII	TTCGAA	1 cut(s)	754
BaeGI	GKGCMC	1 cut(s)	424
BanI	GGYRCC	2 cut(s)	518, 915
BanII	GRGCYC	2 cut(s)	435, 909
BbsI	GAAGAC	1 cut(s)	345
Bbv12I	GWGCWC	4 cut(s)	424, 435, 782, 909
BbvI	GCAGC	4 cut(s)	275, 384, 536, 541
BccI	CCATC	1 cut(s)	254
BciT130I	CCWGG	2 cut(s)	209, 843
BciVI	GTATCC	1 cut(s)	454
BclI	TGATCA	1 cut(s)	991
BcnI	CCSGG	1 cut(s)	920
BcoDI	GTCTC	1 cut(s)	722
BfaI	CTAG	2 cut(s)	156, 242
BfoI	RGCGCY	1 cut(s)	919
BfrI	CTTAAG	1 cut(s)	574
BfuI	GTATCC	1 cut(s)	454
BisI	GCNGC	6 cut(s)	289, 398, 522, 525, 555, 999
BlpI	GCTNAGC	1 cut(s)	429
BlsI	GCNGC	6 cut(s)	290, 399, 523, 526, 556, 1000
Bme1390I	CCNGG	3 cut(s)	209, 843, 920
BmeRI	GACNNNNNGTC	1 cut(s)	964
BmgT120I	GGNCC	1 cut(s)	976
BmiI	GGNNCC	2 cut(s)	520, 917
BmrFI	CCNGG	3 cut(s)	209, 843, 920
BmsI	GCATC	4 cut(s)	502, 541, 674, 913
BpiI	GAAGAC	1 cut(s)	345
BpmI	CTGGAG	1 cut(s)	553
Bpu10I	CCTNAGC	1 cut(s)	761
Bpu1102I	GCTNAGC	1 cut(s)	429
Bpu14I	TTCGAA	1 cut(s)	754
BpuEI	CTTGAG	1 cut(s)	956
BpuMI	CCSGG	1 cut(s)	920
Bsa29I	ATCGAT	1 cut(s)	1024
BsaHI	GRCGYC	1 cut(s)	916
BsaJI	CCNNGG	4 cut(s)	193, 207, 689, 842
BsaWI	WCCGGW	1 cut(s)	540
BsaXI	ACNNNNNCTCC	2 cut(s)	23, 53
Bsc4I	CCNNNNNNNGG	4 cut(s)	147, 325, 515, 589
Bse118I	RCCGGY	2 cut(s)	540, 589
Bse1I	ACTGG	1 cut(s)	484
Bse3DI	GCAATG	1 cut(s)	130
BseBI	CCWGG	2 cut(s)	209, 843
BseCI	ATCGAT	1 cut(s)	1024
BseDI	CCNNGG	4 cut(s)	193, 207, 689, 842
BseGI	GGATG	3 cut(s)	11, 736, 928
BseLI	CCNNNNNNNGG	4 cut(s)	147, 325, 515, 589
BseMI	GCAATG	1 cut(s)	130
BseMII	CTCAG	3 cut(s)	420, 690, 767
BseNI	ACTGG	1 cut(s)	484
BseSI	GKGCMC	1 cut(s)	424
BseXI	GCAGC	4 cut(s)	275, 384, 536, 541
BseYI	CCCAGC	1 cut(s)	393
BsgI	GTGCAG	1 cut(s)	333
BshFI	GGCC	4 cut(s)	151, 694, 808, 978
BshNI	GGYRCC	2 cut(s)	518, 915
BshTI	ACCGGT	1 cut(s)	540
BshVI	ATCGAT	1 cut(s)	1024
BsiHKAI	GWGCWC	4 cut(s)	424, 435, 782, 909
BsiSI	CCGG	4 cut(s)	319, 541, 590, 920
BslI	CCNNNNNNNGG	4 cut(s)	147, 325, 515, 589
BsmAI	GTCTC	1 cut(s)	722
BsmBI	CGTCTC	1 cut(s)	722
BsnI	GGCC	4 cut(s)	151, 694, 808, 978
Bsp119I	TTCGAA	1 cut(s)	754
Bsp1286I	GDGCHC	4 cut(s)	424, 435, 782, 909
Bsp143I	GATC	3 cut(s)	682, 991, 1005
Bsp1720I	GCTNAGC	1 cut(s)	429
BspACI	CCGC	4 cut(s)	522, 686, 766, 998
BspANI	GGCC	4 cut(s)	151, 694, 808, 978
BspCNI	CTCAG	3 cut(s)	421, 689, 768
BspDI	ATCGAT	1 cut(s)	1024
BspLI	GGNNCC	2 cut(s)	520, 917
BspPI	GGATC	2 cut(s)	677, 1013
BspT104I	TTCGAA	1 cut(s)	754
BspT107I	GGYRCC	2 cut(s)	518, 915
BspTI	CTTAAG	1 cut(s)	574
BsrDI	GCAATG	1 cut(s)	130
BsrFI	RCCGGY	2 cut(s)	540, 589
BsrI	ACTGG	1 cut(s)	484
BssAI	RCCGGY	2 cut(s)	540, 589
BssECI	CCNNGG	4 cut(s)	193, 207, 689, 842
BssMI	GATC	3 cut(s)	682, 991, 1005
BssNAI	GTATAC	1 cut(s)	796
BssNI	GRCGYC	1 cut(s)	916
BssT1I	CCWWGG	2 cut(s)	193, 689
Bst1107I	GTATAC	1 cut(s)	796
Bst2UI	CCWGG	2 cut(s)	209, 843
Bst4CI	ACNGT	2 cut(s)	189, 793
Bst6I	CTCTTC	1 cut(s)	1018
BstACI	GRCGYC	1 cut(s)	916
BstAFI	CTTAAG	1 cut(s)	574
BstBI	TTCGAA	1 cut(s)	754
BstC8I	GCNNGC	3 cut(s)	293, 663, 897
BstDEI	CTNAG	4 cut(s)	429, 676, 761, 776
BstF5I	GGATG	3 cut(s)	11, 736, 928
BstH2I	RGCGCY	1 cut(s)	919
BstHHI	GCGC	1 cut(s)	918
BstKTI	GATC	3 cut(s)	685, 994, 1008
BstMAI	GTCTC	1 cut(s)	722
BstMBI	GATC	3 cut(s)	682, 991, 1005
BstMWI	GCNNNNNNNGC	2 cut(s)	521, 913
BstNI	CCWGG	2 cut(s)	209, 843
BstSCI	CCNGG	3 cut(s)	207, 841, 918
BstSLI	GKGCMC	1 cut(s)	424
BstV1I	GCAGC	4 cut(s)	275, 384, 536, 541
BstV2I	GAAGAC	1 cut(s)	345
BstX2I	RGATCY	1 cut(s)	1005
BstXI	CCANNNNNNTGG	1 cut(s)	849
BstYI	RGATCY	1 cut(s)	1005
BstZ17I	GTATAC	1 cut(s)	796
Bsu15I	ATCGAT	1 cut(s)	1024
BsuI	GTATCC	1 cut(s)	454
BsuRI	GGCC	4 cut(s)	151, 694, 808, 978
BsuTUI	ATCGAT	1 cut(s)	1024
BtsCI	GGATG	3 cut(s)	11, 736, 928
BtsIMutI	CAGTG	1 cut(s)	730
Cac8I	GCNNGC	3 cut(s)	293, 663, 897
CfoI	GCGC	1 cut(s)	918
Cfr10I	RCCGGY	2 cut(s)	540, 589
Cfr13I	GGNCC	1 cut(s)	976
ClaI	ATCGAT	1 cut(s)	1024
Csp6I	GTAC	2 cut(s)	593, 769
CspAI	ACCGGT	1 cut(s)	540
CviAII	CATG	2 cut(s)	703, 849
CviQI	GTAC	2 cut(s)	593, 769
DdeI	CTNAG	4 cut(s)	429, 676, 761, 776
DinI	GGCGCC	1 cut(s)	917
DpnI	GATC	3 cut(s)	684, 993, 1007
DpnII	GATC	3 cut(s)	682, 991, 1005
DriI	GACNNNNNGTC	1 cut(s)	964
Eam1104I	CTCTTC	1 cut(s)	1018
Eam1105I	GACNNNNNGTC	1 cut(s)	964
EarI	CTCTTC	1 cut(s)	1018
EciI	GGCGGA	1 cut(s)	675
Ecl136II	GAGCTC	2 cut(s)	433, 907
Eco130I	CCWWGG	2 cut(s)	193, 689
Eco147I	AGGCCT	2 cut(s)	694, 808
Eco24I	GRGCYC	2 cut(s)	435, 909
Eco32I	GATATC	1 cut(s)	890
Eco53kI	GAGCTC	2 cut(s)	433, 907
Eco57I	CTGAAG	1 cut(s)	339
EcoICRI	GAGCTC	2 cut(s)	433, 907
EcoRII	CCWGG	2 cut(s)	207, 841
EcoRV	GATATC	1 cut(s)	890
EcoT14I	CCWWGG	2 cut(s)	193, 689
EcoT38I	GRGCYC	2 cut(s)	435, 909
EgeI	GGCGCC	1 cut(s)	917
EheI	GGCGCC	1 cut(s)	917
ErhI	CCWWGG	2 cut(s)	193, 689
Esp3I	CGTCTC	1 cut(s)	722
FaeI	CATG	2 cut(s)	706, 852
FatI	CATG	2 cut(s)	702, 848
FbaI	TGATCA	1 cut(s)	991
FblI	GTMKAC	2 cut(s)	795, 957
Fnu4HI	GCNGC	6 cut(s)	289, 398, 522, 525, 555, 999
FokI	GGATG	2 cut(s)	743, 935
FriOI	GRGCYC	2 cut(s)	435, 909
Fsp4HI	GCNGC	6 cut(s)	289, 398, 522, 525, 555, 999
FspBI	CTAG	2 cut(s)	156, 242
GlaI	GCGC	1 cut(s)	917
GluI	GCNGC	6 cut(s)	289, 398, 522, 525, 555, 999
GsaI	CCCAGC	1 cut(s)	397
GsuI	CTGGAG	1 cut(s)	553
HaeII	RGCGCY	1 cut(s)	919
HaeIII	GGCC	4 cut(s)	151, 694, 808, 978
HapII	CCGG	4 cut(s)	319, 541, 590, 920
HhaI	GCGC	1 cut(s)	918
Hin1I	GRCGYC	1 cut(s)	916
Hin1II	CATG	2 cut(s)	706, 852
Hin6I	GCGC	1 cut(s)	916
HinP1I	GCGC	1 cut(s)	916
HindIII	AAGCTT	2 cut(s)	144, 659
HinfI	GANTC	2 cut(s)	564, 709
HpaII	CCGG	4 cut(s)	319, 541, 590, 920
HphI	GGTGA	4 cut(s)	130, 209, 275, 341
Hpy166II	GTNNAC	4 cut(s)	266, 422, 796, 958
Hpy188I	TCNGA	6 cut(s)	301, 489, 639, 679, 777, 970
Hpy188III	TCNNGA	7 cut(s)	165, 218, 357, 407, 509, 629, 1044
Hpy8I	GTNNAC	4 cut(s)	266, 422, 796, 958
HpyAV	CCTTC	5 cut(s)	54, 162, 306, 410, 847
HpyCH4III	ACNGT	2 cut(s)	189, 793
HpyCH4V	TGCA	7 cut(s)	123, 314, 341, 400, 422, 665, 814
HpyF10VI	GCNNNNNNNGC	2 cut(s)	521, 913
HpyF3I	CTNAG	4 cut(s)	429, 676, 761, 776
Hsp92I	GRCGYC	1 cut(s)	916
Hsp92II	CATG	2 cut(s)	706, 852
HspAI	GCGC	1 cut(s)	916
KasI	GGCGCC	1 cut(s)	915
Ksp22I	TGATCA	1 cut(s)	991
Kzo9I	GATC	3 cut(s)	682, 991, 1005
LmnI	GCTCC	1 cut(s)	44
Lsp1109I	GCAGC	4 cut(s)	275, 384, 536, 541
LweI	GCATC	4 cut(s)	502, 541, 674, 913
MaeI	CTAG	2 cut(s)	156, 242
MaeIII	GTNAC	1 cut(s)	578
MalI	GATC	3 cut(s)	684, 993, 1007
MboI	GATC	3 cut(s)	682, 991, 1005
MfeI	CAATTG	1 cut(s)	83
MflI	RGATCY	1 cut(s)	1005
MhlI	GDGCHC	4 cut(s)	424, 435, 782, 909
MluCI	AATT	4 cut(s)	83, 168, 401, 440
Mly113I	GGCGCC	1 cut(s)	916
MmeI	TCCRAC	4 cut(s)	81, 624, 715, 721
MroXI	GAANNNNTTC	1 cut(s)	857
MseI	TTAA	5 cut(s)	114, 386, 495, 575, 747
MspA1I	CMGCKG	2 cut(s)	288, 397
MspCI	CTTAAG	1 cut(s)	574
MspI	CCGG	4 cut(s)	319, 541, 590, 920
MspR9I	CCNGG	3 cut(s)	209, 843, 920
MunI	CAATTG	1 cut(s)	83
MvaI	CCWGG	2 cut(s)	209, 843
MwoI	GCNNNNNNNGC	2 cut(s)	521, 913
NarI	GGCGCC	1 cut(s)	916
NciI	CCSGG	1 cut(s)	920
NdeII	GATC	3 cut(s)	682, 991, 1005
NlaIII	CATG	2 cut(s)	706, 852
NlaIV	GGNNCC	2 cut(s)	520, 917
NmuCI	GTSAC	1 cut(s)	578
NspV	TTCGAA	1 cut(s)	754
PceI	AGGCCT	2 cut(s)	694, 808
PdmI	GAANNNNTTC	1 cut(s)	857
PfeI	GAWTC	2 cut(s)	564, 709
PflMI	CCANNNNNTGG	1 cut(s)	147
PinAI	ACCGGT	1 cut(s)	540
PkrI	GCNGC	6 cut(s)	290, 399, 523, 526, 556, 1000
PluTI	GGCGCC	1 cut(s)	919
Psp124BI	GAGCTC	2 cut(s)	435, 909
Psp6I	CCWGG	2 cut(s)	207, 841
PspFI	CCCAGC	1 cut(s)	393
PspGI	CCWGG	2 cut(s)	207, 841
PspN4I	GGNNCC	2 cut(s)	520, 917
PspPI	GGNCC	1 cut(s)	976
PsuI	RGATCY	1 cut(s)	1005
PvuII	CAGCTG	2 cut(s)	288, 397
RsaI	GTAC	2 cut(s)	594, 770
RsaNI	GTAC	2 cut(s)	593, 769
SacI	GAGCTC	2 cut(s)	435, 909
SaqAI	TTAA	5 cut(s)	114, 386, 495, 575, 747
SatI	GCNGC	6 cut(s)	289, 398, 522, 525, 555, 999
Sau3AI	GATC	3 cut(s)	682, 991, 1005
Sau96I	GGNCC	1 cut(s)	976
ScrFI	CCNGG	3 cut(s)	209, 843, 920
SduI	GDGCHC	4 cut(s)	424, 435, 782, 909
SfaNI	GCATC	4 cut(s)	502, 541, 674, 913
SfoI	GGCGCC	1 cut(s)	917
SfuI	TTCGAA	1 cut(s)	754
SmlI	CTYRAG	2 cut(s)	574, 935
SmoI	CTYRAG	2 cut(s)	574, 935
Sse9I	AATT	4 cut(s)	83, 168, 401, 440
SseBI	AGGCCT	2 cut(s)	694, 808
SsiI	CCGC	4 cut(s)	522, 686, 766, 998
SspDI	GGCGCC	1 cut(s)	915
SspMI	CTAG	2 cut(s)	156, 242
SstI	GAGCTC	2 cut(s)	435, 909
StuI	AGGCCT	2 cut(s)	694, 808
StyD4I	CCNGG	3 cut(s)	207, 841, 918
StyI	CCWWGG	2 cut(s)	193, 689
TaaI	ACNGT	2 cut(s)	189, 793
TaqI	TCGA	2 cut(s)	754, 1024
TaqII	GACCGA	1 cut(s)	597
TasI	AATT	4 cut(s)	83, 168, 401, 440
TauI	GCSGC	2 cut(s)	524, 1001
TfiI	GAWTC	2 cut(s)	564, 709
Tru1I	TTAA	5 cut(s)	114, 386, 495, 575, 747
Tru9I	TTAA	5 cut(s)	114, 386, 495, 575, 747
TscAI	CASTG	1 cut(s)	730
TseFI	GTSAC	1 cut(s)	578
TseI	GCWGC	4 cut(s)	288, 397, 524, 554
Tsp45I	GTSAC	1 cut(s)	578
TspDTI	ATGAA	1 cut(s)	426
TspRI	CASTG	1 cut(s)	730
Van91I	CCANNNNNTGG	1 cut(s)	147
Vha464I	CTTAAG	1 cut(s)	574
VneI	GTGCAC	1 cut(s)	420
XapI	RAATTY	1 cut(s)	168
XmiI	GTMKAC	2 cut(s)	795, 957
XmnI	GAANNNNTTC	1 cut(s)	857
XspI	CTAG	2 cut(s)	156, 242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.