Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0014020

Physical Location & Seq

Genomic Coordinates Reverse (-)

30445489 .. 30446640

Gene Structure 1152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G361000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 657 bp

ATGGCCTCTGCTTCACCAATGGCCAGCCAGCTCAAATCCAACTTCACCTCCCCAATCACTAGACCTGCTTTGGTTTCACCCAAAGGCCTCTCTGCCTCTCCCCTAAGCCTCTTGCCTTCTAAAAGACTCTCTTCCTTCACCATCAAGGCCGTCCAATCTGACAAGCCAACTTTCCAAGTGATTCAGCCCATCAATGGTGATCCCTTCATTGGAAGCCTGGAGACTCCAGTGACATCTAGCCCATTGATTGCCTGGTACTTGTCCAACCTCCCAGCCTACAGGACTGCTGTGAGCCCACTTCTCAGGGGTATTGAGGTGGGCCTGGCTCATGGGTTCTTGCTGGTGGGCCCATTCGTCAAGGCTGGTCCATTGAGGAACACACCCTATGCTGGGGGAGCTGGCTCCTTGGCTGCTGCGGGTCTTGTGGTCATATTGAGCCTTTGCTTGACAATCTATGGAATTTCATCCTTCAAGGAAGGAGACCCATCCACAGCTCCTGCTTTGACCCTAACTGGCCGGAAAAAGGAGCCCGATCAGCTTCAAACCGCCGAGGGATGGGCCAAATTCACCGGCGGCTTCTTCTTCGGAGGCATTTCAGGTGTTACTTGGGCCTACTTCCTCCTCTATGTTGTAAACCTTCCTTACTACGTCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009941 GO:0010287 GO:0016020 GO:0019904 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00195 ko01100 map00195 map01100

Pfam Domains

Protein Families

PsaL

Protein Analysis

219

Amino Acids

22.98

Weight (kDa)

9.68

Isoelectric Point (pI)

41.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014020)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12800
fragaria_vesca	FvH4_6g00530
malus_domestica	MD04G1244400.v1.1 MD12G1260300.v1.1
prunus_persica	Prupe.6G361000_v2.0.a1
pyrus_communis	pycom04g21530 pycom12g23840
rosa_chinensis	RchiOBHm_Chr3g0447921
rosa_laevigata	RLG00000025961
rosa_multiflora	Rmu_sc0005969.1_g000004
rosa_roxburghii	Rroxscaffold_6G00426110
rosa_rugosa	Rorug02G0607000
rosa_samantha	Rh3AG006300 Rh3BG006000 Rh3CG006200 Rh3DG006500
rosa_wichuraiana	Rw3G000490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	73
AciI	CCGC	3 cut(s)	416, 546, 573
AclWI	GGATC	1 cut(s)	194
AcoI	YGGCCR	2 cut(s)	21, 514
AcsI	RAATTY	2 cut(s)	459, 563
AfaI	GTAC	1 cut(s)	257
AfiI	CCNNNNNNNGG	6 cut(s)	194, 209, 389, 390, 523, 555
AgsI	TTSAA	2 cut(s)	472, 542
AjnI	CCWGG	3 cut(s)	216, 251, 321
AluBI	AGCT	4 cut(s)	31, 398, 494, 538
AluI	AGCT	4 cut(s)	31, 398, 494, 538
Alw26I	GTCTC	2 cut(s)	215, 474
AlwI	GGATC	1 cut(s)	194
AlwNI	CAGNNNCTG	1 cut(s)	497
AoxI	GGCC	9 cut(s)	3, 21, 85, 147, 319, 346, 514, 558, 609
ApaI	GGGCCC	1 cut(s)	350
ApeKI	GCWGC	2 cut(s)	410, 413
ApoI	RAATTY	2 cut(s)	459, 563
AspS9I	GGNCC	6 cut(s)	319, 346, 347, 365, 558, 609
AsuHPI	GGTGA	6 cut(s)	6, 37, 69, 130, 209, 559
AvaII	GGWCC	1 cut(s)	365
BaeGI	GKGCMC	1 cut(s)	350
BalI	TGGCCA	1 cut(s)	23
BanII	GRGCYC	3 cut(s)	296, 350, 531
BbvI	GCAGC	2 cut(s)	397, 400
BccI	CCATC	4 cut(s)	149, 197, 493, 549
BceAI	ACGGC	1 cut(s)	134
BciT130I	CCWGG	3 cut(s)	218, 253, 323
BcoDI	GTCTC	2 cut(s)	215, 474
BfaI	CTAG	2 cut(s)	60, 237
BfmI	CTRYAG	1 cut(s)	277
BfuAI	ACCTGC	1 cut(s)	73
BisI	GCNGC	3 cut(s)	411, 414, 574
BlsI	GCNGC	3 cut(s)	412, 415, 575
Bme1390I	CCNGG	3 cut(s)	218, 253, 323
Bme18I	GGWCC	1 cut(s)	365
BmgT120I	GGNCC	6 cut(s)	319, 346, 347, 365, 558, 609
BmiI	GGNNCC	3 cut(s)	348, 403, 528
BmrFI	CCNGG	3 cut(s)	218, 253, 323
BpmI	CTGGAG	2 cut(s)	210, 239
Bpu10I	CCTNAGC	1 cut(s)	104
BsaI	GGTCTC	1 cut(s)	474
BsaJI	CCNNGG	2 cut(s)	405, 549
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	6 cut(s)	194, 209, 389, 390, 523, 555
Bse118I	RCCGGY	1 cut(s)	569
Bse1I	ACTGG	2 cut(s)	227, 517
BseBI	CCWGG	3 cut(s)	218, 253, 323
BseDI	CCNNGG	2 cut(s)	405, 549
BseGI	GGATG	3 cut(s)	464, 485, 560
BseLI	CCNNNNNNNGG	6 cut(s)	194, 209, 389, 390, 523, 555
BseMII	CTCAG	1 cut(s)	316
BseNI	ACTGG	2 cut(s)	227, 517
BseRI	GAGGAG	1 cut(s)	611
BseSI	GKGCMC	1 cut(s)	350
BseXI	GCAGC	2 cut(s)	397, 400
BseYI	CCCAGC	2 cut(s)	271, 389
BshFI	GGCC	9 cut(s)	5, 23, 87, 149, 321, 348, 516, 560, 611
BsiSI	CCGG	2 cut(s)	517, 570
BslI	CCNNNNNNNGG	6 cut(s)	194, 209, 389, 390, 523, 555
BsmAI	GTCTC	2 cut(s)	215, 474
BsnI	GGCC	9 cut(s)	5, 23, 87, 149, 321, 348, 516, 560, 611
Bso31I	GGTCTC	1 cut(s)	474
Bsp120I	GGGCCC	1 cut(s)	346
Bsp1286I	GDGCHC	3 cut(s)	296, 350, 531
Bsp143I	GATC	2 cut(s)	199, 532
BspACI	CCGC	3 cut(s)	416, 546, 573
BspANI	GGCC	9 cut(s)	5, 23, 87, 149, 321, 348, 516, 560, 611
BspCNI	CTCAG	1 cut(s)	315
BspLI	GGNNCC	3 cut(s)	348, 403, 528
BspMI	ACCTGC	1 cut(s)	73
BspPI	GGATC	1 cut(s)	194
BspTNI	GGTCTC	1 cut(s)	474
BsrFI	RCCGGY	1 cut(s)	569
BsrI	ACTGG	2 cut(s)	227, 517
BssAI	RCCGGY	1 cut(s)	569
BssECI	CCNNGG	2 cut(s)	405, 549
BssMI	GATC	2 cut(s)	199, 532
BssT1I	CCWWGG	1 cut(s)	405
Bst2UI	CCWGG	3 cut(s)	218, 253, 323
Bst6I	CTCTTC	1 cut(s)	136
BstC8I	GCNNGC	3 cut(s)	25, 29, 400
BstDEI	CTNAG	2 cut(s)	104, 302
BstF5I	GGATG	3 cut(s)	464, 485, 560
BstKTI	GATC	2 cut(s)	202, 535
BstMAI	GTCTC	2 cut(s)	215, 474
BstMBI	GATC	2 cut(s)	199, 532
BstMWI	GCNNNNNNNGC	2 cut(s)	395, 535
BstNI	CCWGG	3 cut(s)	218, 253, 323
BstSCI	CCNGG	3 cut(s)	216, 251, 321
BstSFI	CTRYAG	1 cut(s)	277
BstSLI	GKGCMC	1 cut(s)	350
BstV1I	GCAGC	2 cut(s)	397, 400
BsuRI	GGCC	9 cut(s)	5, 23, 87, 149, 321, 348, 516, 560, 611
BtsCI	GGATG	3 cut(s)	464, 485, 560
BtsIMutI	CAGTG	1 cut(s)	234
BveI	ACCTGC	1 cut(s)	73
Cac8I	GCNNGC	3 cut(s)	25, 29, 400
CaiI	CAGNNNCTG	1 cut(s)	497
Cfr10I	RCCGGY	1 cut(s)	569
Cfr13I	GGNCC	6 cut(s)	319, 346, 347, 365, 558, 609
Csp6I	GTAC	1 cut(s)	256
CviAII	CATG	1 cut(s)	329
CviQI	GTAC	1 cut(s)	256
DdeI	CTNAG	2 cut(s)	104, 302
DpnI	GATC	2 cut(s)	201, 534
DpnII	GATC	2 cut(s)	199, 532
EaeI	YGGCCR	2 cut(s)	21, 514
Eam1104I	CTCTTC	1 cut(s)	136
EarI	CTCTTC	1 cut(s)	136
Eco130I	CCWWGG	1 cut(s)	405
Eco147I	AGGCCT	1 cut(s)	87
Eco24I	GRGCYC	3 cut(s)	296, 350, 531
Eco31I	GGTCTC	1 cut(s)	474
Eco47I	GGWCC	1 cut(s)	365
EcoRII	CCWGG	3 cut(s)	216, 251, 321
EcoT14I	CCWWGG	1 cut(s)	405
EcoT38I	GRGCYC	3 cut(s)	296, 350, 531
ErhI	CCWWGG	1 cut(s)	405
FaeI	CATG	1 cut(s)	332
FaiI	YATR	5 cut(s)	330, 387, 431, 456, 627
FalI	AAGNNNNNCTT	2 cut(s)	115, 147
FatI	CATG	1 cut(s)	328
FauI	CCCGC	1 cut(s)	409
Fnu4HI	GCNGC	3 cut(s)	411, 414, 574
FokI	GGATG	3 cut(s)	451, 472, 567
FriOI	GRGCYC	3 cut(s)	296, 350, 531
Fsp4HI	GCNGC	3 cut(s)	411, 414, 574
FspBI	CTAG	2 cut(s)	60, 237
GluI	GCNGC	3 cut(s)	411, 414, 574
GsaI	CCCAGC	2 cut(s)	275, 393
GsuI	CTGGAG	2 cut(s)	210, 239
HaeIII	GGCC	9 cut(s)	5, 23, 87, 149, 321, 348, 516, 560, 611
HapII	CCGG	2 cut(s)	517, 570
Hin1II	CATG	1 cut(s)	332
HinfI	GANTC	3 cut(s)	126, 181, 223
HpaII	CCGG	2 cut(s)	517, 570
HphI	GGTGA	6 cut(s)	6, 37, 69, 130, 209, 559
Hpy166II	GTNNAC	1 cut(s)	634
Hpy188I	TCNGA	2 cut(s)	160, 587
Hpy8I	GTNNAC	1 cut(s)	634
HpyAV	CCTTC	6 cut(s)	126, 145, 214, 470, 478, 647
HpyCH4IV	ACGT	1 cut(s)	648
HpyF10VI	GCNNNNNNNGC	2 cut(s)	395, 535
HpyF3I	CTNAG	2 cut(s)	104, 302
HpySE526I	ACGT	1 cut(s)	648
Hsp92II	CATG	1 cut(s)	332
Kzo9I	GATC	2 cut(s)	199, 532
LmnI	GCTCC	4 cut(s)	395, 407, 499, 526
Lsp1109I	GCAGC	2 cut(s)	397, 400
MaeI	CTAG	2 cut(s)	60, 237
MaeII	ACGT	1 cut(s)	648
MaeIII	GTNAC	2 cut(s)	229, 601
MalI	GATC	2 cut(s)	201, 534
MboI	GATC	2 cut(s)	199, 532
MboII	GAAGA	3 cut(s)	123, 571, 574
MhlI	GDGCHC	3 cut(s)	296, 350, 531
MlsI	TGGCCA	1 cut(s)	23
MluCI	AATT	2 cut(s)	459, 563
MluNI	TGGCCA	1 cut(s)	23
MlyI	GAGTC	2 cut(s)	120, 217
MmeI	TCCRAC	2 cut(s)	63, 288
Mox20I	TGGCCA	1 cut(s)	23
MscI	TGGCCA	1 cut(s)	23
Msp20I	TGGCCA	1 cut(s)	23
MspI	CCGG	2 cut(s)	517, 570
MspR9I	CCNGG	3 cut(s)	218, 253, 323
MvaI	CCWGG	3 cut(s)	218, 253, 323
MwoI	GCNNNNNNNGC	2 cut(s)	395, 535
NdeII	GATC	2 cut(s)	199, 532
NlaIII	CATG	1 cut(s)	332
NlaIV	GGNNCC	3 cut(s)	348, 403, 528
NmeAIII	GCCGAG	1 cut(s)	574
NmuCI	GTSAC	1 cut(s)	229
PceI	AGGCCT	1 cut(s)	87
PfeI	GAWTC	1 cut(s)	181
PkrI	GCNGC	3 cut(s)	412, 415, 575
PleI	GAGTC	2 cut(s)	120, 217
PpsI	GAGTC	2 cut(s)	120, 217
Psp6I	CCWGG	3 cut(s)	216, 251, 321
PspFI	CCCAGC	2 cut(s)	271, 389
PspGI	CCWGG	3 cut(s)	216, 251, 321
PspN4I	GGNNCC	3 cut(s)	348, 403, 528
PspOMI	GGGCCC	1 cut(s)	346
PspPI	GGNCC	6 cut(s)	319, 346, 347, 365, 558, 609
PstNI	CAGNNNCTG	1 cut(s)	497
RsaI	GTAC	1 cut(s)	257
RsaNI	GTAC	1 cut(s)	256
SatI	GCNGC	3 cut(s)	411, 414, 574
Sau3AI	GATC	2 cut(s)	199, 532
Sau96I	GGNCC	6 cut(s)	319, 346, 347, 365, 558, 609
SchI	GAGTC	2 cut(s)	120, 217
ScrFI	CCNGG	3 cut(s)	218, 253, 323
SduI	GDGCHC	3 cut(s)	296, 350, 531
SfcI	CTRYAG	1 cut(s)	277
SgrAI	CRCCGGYG	1 cut(s)	569
SinI	GGWCC	1 cut(s)	365
Sse9I	AATT	2 cut(s)	459, 563
SseBI	AGGCCT	1 cut(s)	87
SsiI	CCGC	3 cut(s)	416, 546, 573
SspMI	CTAG	2 cut(s)	60, 237
StuI	AGGCCT	1 cut(s)	87
StyD4I	CCNGG	3 cut(s)	216, 251, 321
StyI	CCWWGG	1 cut(s)	405
TaiI	ACGT	1 cut(s)	651
TasI	AATT	2 cut(s)	459, 563
TauI	GCSGC	1 cut(s)	576
TfiI	GAWTC	1 cut(s)	181
TscAI	CASTG	1 cut(s)	234
TseFI	GTSAC	1 cut(s)	229
TseI	GCWGC	2 cut(s)	410, 413
Tsp45I	GTSAC	1 cut(s)	229
TspDTI	ATGAA	2 cut(s)	196, 453
TspRI	CASTG	1 cut(s)	234
VpaK11BI	GGWCC	1 cut(s)	365
XapI	RAATTY	2 cut(s)	459, 563
XcmI	CCANNNNNNNNNTGG	1 cut(s)	249
XspI	CTAG	2 cut(s)	60, 237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.