Prupe.6G363000_v2.0.a1

RNA-binding protein Luc7-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0007777
Physical Location & Seq
Reverse (-)
30527148 .. 30532906
5759 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G363000.1

Sequence Viewer

Length: 1245 bp
ATGGACGCGCTGAGGAAGCAGCTGGACCAGCTTATGGGGGCCAATCGAAACGGCGACGTCCGAGAGGTCAACCGCAAATATTACGATCGCGAAGTGTGTCGCCTCTACTTGGTCGGGCTCTGCCCCCACGAGCTTTTCCAGTTAACGAAAATGGATATGGGTCCCTGCCCTAAGGTCCACTCGTTGCAGCTCAGAAAAGAATACGAAGAAGCCAAAGCAAAAGGGACTGATGACTATGACAGAGACCTGGAGGATGTCATAGATAGGCTCATTGTTGAGTGTGATAGGAAAATTGCTAGAGCTCTTAAGCGCCTTGAGGATGATGATGCAAAGGCTGCTATTGCAATTTCTGTCTCTGAAGTTACTCAGACGCCAGAGGTACTCGAGTTGTCAAAGCAGATCAAGGAAAAGTTGAAAGAAGTTGATCAATTTGATCTTGAAGGCAAGACAGATCTTAAGATTCGGGCTATGGAGATAGTAGACGAACTCAGAGGCAAGAGAGCAGATAAACAGTCCATGCTTCTTTTGGATGCTTTCAATAAGGATAGGGCATCCTTACCTCAACCCCTGCCAAACCCGCCACCTTTGGCACCCTTGCCTGTAGTTGTTCCCGATGCCCGAACACAGGAAATGATAAATGAAAAGTTGAAGAAGGCAGAGGACCTTGGTGAGCAAGGAATGGTTGATGAGGCACAAAAAGCGCTGGAAGAGGCTGAAGCACTGAAGAAGCTGCCTGCCAGACAGGAGCCTATCCTGGATTCCTCCAAGTACACTGCTGCTGATGTGCGCATTACTGATCAAAAGCTACGTGTTTGTGACATCTGTGGAGCATTTTTGAGTGTTTATGACAGTGACCGTCGTTTAGCGGATCACTTTGGCGGGAAGCTTCATTTAGGCTATATGCAAATCCGTGAGAAGTTAGCAGAGCTGCAGGAAGAGAGAAACAAGATTCGCAAGGTTGATCGGTCTGAGGATAGGAGATCAAAAGAGCGAAGTAAGGAACGCGACAGGGAATCAAGTAGGGATAGGGAACGAGGAGATAGCCGCGACCGAGGTAGGGATCATGATCGTAGGAGCAGAGATCGTGATAGGTATTATGATCGAGATCGCGGATATGATCGCGAGCGTGACAGAGATTCAGATCGCTCCCGCAATTATGATTCGAGAAGTCGCCGTAGATCACGCTCACGATCAAGGGAGCGTTCCAGGGATTATGATCGCCACAGGCGTTATGATCGGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LUC7

Protein Analysis

415

Amino Acids

48.83

Weight (kDa)

8.78

Isoelectric Point (pI)

56.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 60
Acc16I TGCGCA 1 cut(s) 788
AccB1I GGYRCC 1 cut(s) 589
AccB7I CCANNNNNTGG 1 cut(s) 34
AccI GTMKAC 1 cut(s) 480
AccII CGCG 6 cut(s) 8, 90, 1005, 1047, 1110, 1122
AciI CCGC 7 cut(s) 73, 578, 866, 879, 1045, 1110, 1150
AclWI GGATC 2 cut(s) 876, 1068
AcuI CTGAAG 3 cut(s) 378, 735, 743
AcyI GRCGYC 2 cut(s) 57, 371
AfaI GTAC 3 cut(s) 381, 770, 1241
AfeI AGCGCT 1 cut(s) 702
AfiI CCNNNNNNNGG 4 cut(s) 34, 109, 625, 1057
AflII CTTAAG 2 cut(s) 305, 455
AflIII ACRYGT 1 cut(s) 808
AgsI TTSAA 4 cut(s) 415, 440, 538, 649
AjnI CCWGG 3 cut(s) 246, 753, 1205
AluBI AGCT 9 cut(s) 22, 31, 133, 190, 302, 730, 805, 886, 928
AluI AGCT 9 cut(s) 22, 31, 133, 190, 302, 730, 805, 886, 928
Alw21I GWGCWC 1 cut(s) 304
Alw26I GTCTC 2 cut(s) 237, 358
AlwI GGATC 2 cut(s) 876, 1068
Ama87I CYCGRG 1 cut(s) 383
Aor51HI AGCGCT 1 cut(s) 702
AoxI GGCC 1 cut(s) 39
ApeKI GCWGC 6 cut(s) 19, 187, 335, 730, 776, 928
AspLEI GCGC 4 cut(s) 10, 312, 703, 789
AspS9I GGNCC 5 cut(s) 25, 39, 161, 175, 661
AsuHPI GGTGA 1 cut(s) 680
AvaI CYCGRG 1 cut(s) 383
AvaII GGWCC 4 cut(s) 25, 161, 175, 661
AxyI CCTNAGG 1 cut(s) 171
BaeI ACNNNNGTAYC 2 cut(s) 371, 404
BanI GGYRCC 1 cut(s) 589
BanII GRGCYC 2 cut(s) 120, 304
BauI CACGAG 1 cut(s) 128
Bbv12I GWGCWC 1 cut(s) 304
BbvCI CCTCAGC 1 cut(s) 11
BbvI GCAGC 6 cut(s) 31, 199, 322, 717, 763, 915
BceAI ACGGC 2 cut(s) 67, 1158
BciT130I CCWGG 3 cut(s) 248, 755, 1207
BclI TGATCA 2 cut(s) 424, 796
BcoDI GTCTC 2 cut(s) 237, 358
BfaI CTAG 2 cut(s) 297, 1243
BfmI CTRYAG 2 cut(s) 600, 929
BfoI RGCGCY 2 cut(s) 313, 704
BfrI CTTAAG 2 cut(s) 305, 455
BglII AGATCT 1 cut(s) 451
BisI GCNGC 7 cut(s) 20, 188, 336, 731, 777, 929, 1045
BlsI GCNGC 7 cut(s) 21, 189, 337, 732, 778, 930, 1046
Bme1390I CCNGG 3 cut(s) 248, 755, 1207
Bme18I GGWCC 4 cut(s) 25, 161, 175, 661
BmeT110I CYCGRG 1 cut(s) 383
BmgT120I GGNCC 5 cut(s) 25, 39, 161, 175, 661
BmiI GGNNCC 5 cut(s) 40, 162, 163, 591, 747
BmrFI CCNGG 3 cut(s) 248, 755, 1207
BmsI GCATC 4 cut(s) 316, 520, 560, 604
BpmI CTGGAG 1 cut(s) 269
Bpu10I CCTNAGC 1 cut(s) 11
BpuEI CTTGAG 1 cut(s) 335
BsaAI YACGTR 1 cut(s) 809
BsaBI GATNNNNATC 4 cut(s) 1065, 1104, 1140, 1215
BsaHI GRCGYC 2 cut(s) 57, 371
BsaI GGTCTC 1 cut(s) 237
BsaJI CCNNGG 3 cut(s) 664, 1051, 1206
Bsc4I CCNNNNNNNGG 4 cut(s) 34, 109, 625, 1057
Bse1I ACTGG 1 cut(s) 139
Bse21I CCTNAGG 1 cut(s) 171
Bse8I GATNNNNATC 4 cut(s) 1065, 1104, 1140, 1215
BseBI CCWGG 3 cut(s) 248, 755, 1207
BseDI CCNNGG 3 cut(s) 664, 1051, 1206
BseGI GGATG 4 cut(s) 259, 325, 535, 551
BseJI GATNNNNATC 4 cut(s) 1065, 1104, 1140, 1215
BseLI CCNNNNNNNGG 4 cut(s) 34, 109, 625, 1057
BseMII CTCAG 4 cut(s) 205, 380, 502, 960
BseNI ACTGG 1 cut(s) 139
BseRI GAGGAG 1 cut(s) 1050
BseXI GCAGC 6 cut(s) 31, 199, 322, 717, 763, 915
Bsh1236I CGCG 6 cut(s) 8, 90, 1005, 1047, 1110, 1122
Bsh1285I CGRYCG 2 cut(s) 88, 1051
BshFI GGCC 1 cut(s) 41
BshNI GGYRCC 1 cut(s) 589
BsiEI CGRYCG 2 cut(s) 88, 1051
BsiHKAI GWGCWC 1 cut(s) 304
BsiHKCI CYCGRG 1 cut(s) 383
BslFI GGGAC 2 cut(s) 147, 238
BslI CCNNNNNNNGG 4 cut(s) 34, 109, 625, 1057
BsmAI GTCTC 2 cut(s) 237, 358
BsmFI GGGAC 2 cut(s) 147, 238
BsnI GGCC 1 cut(s) 41
Bso31I GGTCTC 1 cut(s) 237
BsoBI CYCGRG 1 cut(s) 383
Bsp1286I GDGCHC 2 cut(s) 120, 304
Bsp68I TCGCGA 2 cut(s) 90, 1122
BspACI CCGC 7 cut(s) 73, 578, 866, 879, 1045, 1110, 1150
BspANI GGCC 1 cut(s) 41
BspCNI CTCAG 4 cut(s) 204, 379, 501, 961
BspFNI CGCG 6 cut(s) 8, 90, 1005, 1047, 1110, 1122
BspHI TCATGA 1 cut(s) 1063
BspLI GGNNCC 5 cut(s) 40, 162, 163, 591, 747
BspMAI CTGCAG 1 cut(s) 933
BspPI GGATC 2 cut(s) 876, 1068
BspT107I GGYRCC 1 cut(s) 589
BspTI CTTAAG 2 cut(s) 305, 455
BspTNI GGTCTC 1 cut(s) 237
BsrI ACTGG 1 cut(s) 139
BssECI CCNNGG 3 cut(s) 664, 1051, 1206
BssNI GRCGYC 2 cut(s) 57, 371
BssSI CACGAG 1 cut(s) 128
BssT1I CCWWGG 1 cut(s) 664
Bst2BI CACGAG 1 cut(s) 128
Bst2UI CCWGG 3 cut(s) 248, 755, 1207
Bst4CI ACNGT 3 cut(s) 513, 851, 857
Bst6I CTCTTC 2 cut(s) 702, 930
BstACI GRCGYC 2 cut(s) 57, 371
BstAFI CTTAAG 2 cut(s) 305, 455
BstAPI GCANNNNNTGC 1 cut(s) 335
BstBAI YACGTR 1 cut(s) 809
BstC8I GCNNGC 2 cut(s) 735, 1124
BstDEI CTNAG 6 cut(s) 11, 171, 191, 366, 488, 969
BstF5I GGATG 4 cut(s) 259, 325, 535, 551
BstFNI CGCG 6 cut(s) 8, 90, 1005, 1047, 1110, 1122
BstH2I RGCGCY 2 cut(s) 313, 704
BstHHI GCGC 4 cut(s) 10, 312, 703, 789
BstMAI GTCTC 2 cut(s) 237, 358
BstMCI CGRYCG 2 cut(s) 88, 1051
BstMWI GCNNNNNNNGC 6 cut(s) 16, 28, 335, 341, 577, 698
BstNI CCWGG 3 cut(s) 248, 755, 1207
BstSCI CCNGG 3 cut(s) 246, 753, 1205
BstSFI CTRYAG 2 cut(s) 600, 929
BstUI CGCG 6 cut(s) 8, 90, 1005, 1047, 1110, 1122
BstV1I GCAGC 6 cut(s) 31, 199, 322, 717, 763, 915
BstX2I RGATCY 1 cut(s) 451
BstYI RGATCY 1 cut(s) 451
Bsu36I CCTNAGG 1 cut(s) 171
BsuRI GGCC 1 cut(s) 41
BtsCI GGATG 4 cut(s) 259, 325, 535, 551
BtsI GCAGTG 1 cut(s) 771
BtsIMutI CAGTG 3 cut(s) 719, 771, 856
BtuMI TCGCGA 2 cut(s) 90, 1122
Cac8I GCNNGC 2 cut(s) 735, 1124
CciI TCATGA 1 cut(s) 1063
CfoI GCGC 4 cut(s) 10, 312, 703, 789
Cfr13I GGNCC 5 cut(s) 25, 39, 161, 175, 661
CseI GACGC 2 cut(s) 14, 379
Csp6I GTAC 3 cut(s) 380, 769, 1240
CviAII CATG 2 cut(s) 517, 1064
CviQI GTAC 3 cut(s) 380, 769, 1240
DdeI CTNAG 6 cut(s) 11, 171, 191, 366, 488, 969
Eam1104I CTCTTC 2 cut(s) 702, 930
EarI CTCTTC 2 cut(s) 702, 930
Ecl136II GAGCTC 1 cut(s) 302
Eco130I CCWWGG 1 cut(s) 664
Eco24I GRGCYC 2 cut(s) 120, 304
Eco31I GGTCTC 1 cut(s) 237
Eco47I GGWCC 4 cut(s) 25, 161, 175, 661
Eco47III AGCGCT 1 cut(s) 702
Eco53kI GAGCTC 1 cut(s) 302
Eco57I CTGAAG 3 cut(s) 378, 735, 743
Eco81I CCTNAGG 1 cut(s) 171
Eco88I CYCGRG 1 cut(s) 383
EcoICRI GAGCTC 1 cut(s) 302
EcoO109I RGGNCCY 2 cut(s) 161, 661
EcoRII CCWGG 3 cut(s) 246, 753, 1205
EcoT14I CCWWGG 1 cut(s) 664
EcoT38I GRGCYC 2 cut(s) 120, 304
ErhI CCWWGG 1 cut(s) 664
FaeI CATG 2 cut(s) 520, 1067
FaqI GGGAC 2 cut(s) 147, 238
FatI CATG 2 cut(s) 516, 1063
FauI CCCGC 3 cut(s) 585, 872, 1157
FbaI TGATCA 2 cut(s) 424, 796
FblI GTMKAC 1 cut(s) 480
Fnu4HI GCNGC 7 cut(s) 20, 188, 336, 731, 777, 929, 1045
FokI GGATG 4 cut(s) 266, 332, 538, 542
FriOI GRGCYC 2 cut(s) 120, 304
Fsp4HI GCNGC 7 cut(s) 20, 188, 336, 731, 777, 929, 1045
FspAI RTGCGCAY 1 cut(s) 788
FspBI CTAG 2 cut(s) 297, 1243
FspI TGCGCA 1 cut(s) 788
GlaI GCGC 4 cut(s) 9, 311, 702, 788
GluI GCNGC 7 cut(s) 20, 188, 336, 731, 777, 929, 1045
GsuI CTGGAG 1 cut(s) 269
HaeII RGCGCY 2 cut(s) 313, 704
HaeIII GGCC 1 cut(s) 41
HgaI GACGC 2 cut(s) 14, 379
HhaI GCGC 4 cut(s) 10, 312, 703, 789
Hin1I GRCGYC 2 cut(s) 57, 371
Hin1II CATG 2 cut(s) 520, 1067
Hin6I GCGC 4 cut(s) 8, 310, 701, 787
HinP1I GCGC 4 cut(s) 8, 310, 701, 787
HincII GTYRAC 2 cut(s) 70, 144
HindII GTYRAC 2 cut(s) 70, 144
HindIII AAGCTT 1 cut(s) 884
HinfI GANTC 6 cut(s) 460, 758, 949, 1013, 1136, 1160
HpaI GTTAAC 1 cut(s) 144
HphI GGTGA 1 cut(s) 680
Hpy166II GTNNAC 5 cut(s) 70, 144, 178, 481, 771
Hpy188I TCNGA 7 cut(s) 62, 194, 358, 369, 491, 970, 1141
Hpy188III TCNNGA 9 cut(s) 89, 437, 611, 1064, 1085, 1103, 1121, 1164, 1188
Hpy8I GTNNAC 5 cut(s) 70, 144, 178, 481, 771
Hpy99I CGWCG 2 cut(s) 59, 861
HpyAV CCTTC 2 cut(s) 434, 646
HpyCH4III ACNGT 3 cut(s) 513, 851, 857
HpyCH4IV ACGT 2 cut(s) 57, 808
HpyCH4V TGCA 5 cut(s) 187, 329, 344, 904, 931
HpyF10VI GCNNNNNNNGC 6 cut(s) 16, 28, 335, 341, 577, 698
HpyF3I CTNAG 6 cut(s) 11, 171, 191, 366, 488, 969
HpySE526I ACGT 2 cut(s) 57, 808
Hsp92I GRCGYC 2 cut(s) 57, 371
Hsp92II CATG 2 cut(s) 520, 1067
HspAI GCGC 4 cut(s) 8, 310, 701, 787
KflI GGGWCCC 1 cut(s) 161
Ksp22I TGATCA 2 cut(s) 424, 796
KspAI GTTAAC 1 cut(s) 144
LmnI GCTCC 5 cut(s) 745, 827, 1074, 1151, 1198
Lsp1109I GCAGC 6 cut(s) 31, 199, 322, 717, 763, 915
LweI GCATC 4 cut(s) 316, 520, 560, 604
MaeI CTAG 2 cut(s) 297, 1243
MaeII ACGT 2 cut(s) 57, 808
MaeIII GTNAC 4 cut(s) 361, 815, 851, 1127
MboII GAAGA 5 cut(s) 218, 661, 719, 736, 947
MflI RGATCY 1 cut(s) 451
MhlI GDGCHC 2 cut(s) 120, 304
MluCI AATT 4 cut(s) 291, 345, 428, 1153
MseI TTAA 3 cut(s) 143, 306, 456
MspA1I CMGCKG 1 cut(s) 22
MspCI CTTAAG 2 cut(s) 305, 455
MspR9I CCNGG 3 cut(s) 248, 755, 1207
MvaI CCWGG 3 cut(s) 248, 755, 1207
MvnI CGCG 6 cut(s) 8, 90, 1005, 1047, 1110, 1122
MwoI GCNNNNNNNGC 6 cut(s) 16, 28, 335, 341, 577, 698
NlaIII CATG 2 cut(s) 520, 1067
NlaIV GGNNCC 5 cut(s) 40, 162, 163, 591, 747
NmuCI GTSAC 3 cut(s) 815, 851, 1127
NruI TCGCGA 2 cut(s) 90, 1122
NsbI TGCGCA 1 cut(s) 788
PaeR7I CTCGAG 1 cut(s) 383
PagI TCATGA 1 cut(s) 1063
PcsI WCGNNNNNNNCGW 1 cut(s) 1225
PfeI GAWTC 6 cut(s) 460, 758, 949, 1013, 1136, 1160
PflMI CCANNNNNTGG 1 cut(s) 34
PfoI TCCNGGA 1 cut(s) 753
PkrI GCNGC 7 cut(s) 21, 189, 337, 732, 778, 930, 1046
Ple19I CGATCG 1 cut(s) 88
Ppu21I YACGTR 1 cut(s) 809
PpuMI RGGWCCY 2 cut(s) 161, 661
Psp124BI GAGCTC 1 cut(s) 304
Psp5II RGGWCCY 2 cut(s) 161, 661
Psp6I CCWGG 3 cut(s) 246, 753, 1205
PspGI CCWGG 3 cut(s) 246, 753, 1205
PspN4I GGNNCC 5 cut(s) 40, 162, 163, 591, 747
PspPI GGNCC 5 cut(s) 25, 39, 161, 175, 661
PspPPI RGGWCCY 2 cut(s) 161, 661
PspXI VCTCGAGB 1 cut(s) 383
PstI CTGCAG 1 cut(s) 933
PsuI RGATCY 1 cut(s) 451
PvuI CGATCG 1 cut(s) 88
PvuII CAGCTG 1 cut(s) 22
RruI TCGCGA 2 cut(s) 90, 1122
RsaI GTAC 3 cut(s) 381, 770, 1241
RsaNI GTAC 3 cut(s) 380, 769, 1240
SacI GAGCTC 1 cut(s) 304
SaqAI TTAA 3 cut(s) 143, 306, 456
SatI GCNGC 7 cut(s) 20, 188, 336, 731, 777, 929, 1045
Sau96I GGNCC 5 cut(s) 25, 39, 161, 175, 661
ScrFI CCNGG 3 cut(s) 248, 755, 1207
SduI GDGCHC 2 cut(s) 120, 304
SfaNI GCATC 4 cut(s) 316, 520, 560, 604
SfcI CTRYAG 2 cut(s) 600, 929
Sfr274I CTCGAG 1 cut(s) 383
SinI GGWCC 4 cut(s) 25, 161, 175, 661
SlaI CTCGAG 1 cut(s) 383
SmlI CTYRAG 4 cut(s) 305, 314, 383, 455
SmoI CTYRAG 4 cut(s) 305, 314, 383, 455
Sse9I AATT 4 cut(s) 291, 345, 428, 1153
SsiI CCGC 7 cut(s) 73, 578, 866, 879, 1045, 1110, 1150
SspI AATATT 1 cut(s) 80
SspMI CTAG 2 cut(s) 297, 1243
SstI GAGCTC 1 cut(s) 304
StyD4I CCNGG 3 cut(s) 246, 753, 1205
StyI CCWWGG 1 cut(s) 664
TaaI ACNGT 3 cut(s) 513, 851, 857
TaiI ACGT 2 cut(s) 60, 811
TaqI TCGA 4 cut(s) 46, 384, 1102, 1163
TaqII GACCGA 2 cut(s) 954, 1065
TasI AATT 4 cut(s) 291, 345, 428, 1153
TatI WGTACW 1 cut(s) 768
TauI GCSGC 1 cut(s) 1047
TfiI GAWTC 6 cut(s) 460, 758, 949, 1013, 1136, 1160
Tru1I TTAA 3 cut(s) 143, 306, 456
Tru9I TTAA 3 cut(s) 143, 306, 456
TscAI CASTG 3 cut(s) 726, 778, 856
TseFI GTSAC 3 cut(s) 815, 851, 1127
TseI GCWGC 6 cut(s) 19, 187, 335, 730, 776, 928
Tsp45I GTSAC 3 cut(s) 815, 851, 1127
TspDTI ATGAA 2 cut(s) 654, 878
TspGWI ACGGA 1 cut(s) 899
TspRI CASTG 3 cut(s) 726, 778, 856
Van91I CCANNNNNTGG 1 cut(s) 34
Vha464I CTTAAG 2 cut(s) 305, 455
VpaK11BI GGWCC 4 cut(s) 25, 161, 175, 661
XcmI CCANNNNNNNNNTGG 1 cut(s) 523
XhoI CTCGAG 1 cut(s) 383
XmiI GTMKAC 1 cut(s) 480
XspI CTAG 2 cut(s) 297, 1243
ZraI GACGTC 1 cut(s) 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.