Prupe.7G008200_v2.0.a1

Annexin A13-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0017739
Physical Location & Seq
Forward (+)
1155121 .. 1156964
1844 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G008200.1

Sequence Viewer

Length: 999 bp
ATGGGCACCAAAATGCTAAACATGTCAGCCCCCAATCTGGAAAGTGAATGCAAAGAGATTCATGATTCTTGGGGACAGCTAAACCAATTGGCTCTGGCTTTGGCTGGCCGAACCCGCCTTGAAAGGCAACAGATTAGAGAAACTTACAAGGCAATTTATGGAGAGGACTTGGCAAACAGACTCCAAAAGGCAGATCAAATGGCTGACAACAGAAAACAGGCAGCTGCTGGTGTTGGGGTTTCACCAAAATTATGTGCAGCCTTGTCCATGTGGATGATAGAGCAGCATGAACGCGATGCAATTGTGGTCCGGGAGGCCCTTGATGATCAGCAAGGTGACACAAACTATGGCGCTCTTGTAGAGATTTTTGTTGGTCGAAAATCAAGTCAAATCCTTCTCATCAAACAAGCATATCAGAGAAGATTTAGGAGGCAGTTGGACCAAGATATCATCCATATTGAGCCTCCCCATCCTTACCAAAAGATACTGGTGGCATTGGTTGCATCCCACAAGGCACACCAAACAGATATTAGCCAACATATTGCCAAGTCGGATGCACGGAGGCTCTACGAAACAGGGGAGGGGAATTCAGGGCCCATAGAAGCTGTTGTACTAGAAATACTAAGCAAACGGAGCATTCCACAGCTTAAACTCACATTTTCTTGCTATAAACACATTTATGGGCATGAGTATACAGAGTACCTGAAGACCAGAAACTCTGGAGAATTTGAAAACGCAATGAAAACAGTCGTCCAATGCATCTACAGACCAGCTACCTATTTCGCTACGATATTGTATGCAAGCATCAAGGGGTCCATGACCGATAAAGGCGCGTTGGCACGTGTGATGGTGAACAGGGCTGAAGTAGACATGGATGAAATTCAAAGGGAGTTTAAGAGGCAGCATGGGATTGAACTCAGAGATGCATTATGTGACAGTGACAAAATCCCACCTGGGGATTACAGAGACTTTCTTGTTGCCTTGACGGCCTCCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0006950 GO:0006970 GO:0008150 GO:0009266 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0010035 GO:0042221 GO:0050896 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

333

Amino Acids

37.69

Weight (kDa)

8.16

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017739)

Species Orthologous Gene IDs
malus_domestica MD12G1007300.v1.1
prunus_persica Prupe.7G008200_v2.0.a1
pyrus_communis pycom12g00530
rosa_chinensis RchiOBHm_Chr3g0496581
rosa_laevigata RLG00000022517
rosa_roxburghii Rroxscaffold_6G00388900
rosa_rugosa Rorug03G0284700
rosa_samantha Rh3AG329900 Rh3BG365700 Rh3CG362700 Rh3DG365900
rosa_wichuraiana Rw3G028870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 5
AccI GTMKAC 2 cut(s) 692, 867
AccII CGCG 2 cut(s) 294, 833
AciI CCGC 1 cut(s) 115
AcoI YGGCCR 1 cut(s) 106
AcsI RAATTY 3 cut(s) 586, 725, 879
AcuI CTGAAG 2 cut(s) 725, 882
AcvI CACGTG 1 cut(s) 842
AfaI GTAC 2 cut(s) 612, 701
AfiI CCNNNNNNNGG 2 cut(s) 37, 955
AflIII ACRYGT 2 cut(s) 21, 841
AgsI TTSAA 4 cut(s) 122, 731, 884, 914
AjnI CCWGG 1 cut(s) 952
AluBI AGCT 5 cut(s) 79, 224, 605, 646, 773
AluI AGCT 5 cut(s) 79, 224, 605, 646, 773
Alw26I GTCTC 1 cut(s) 960
AlwNI CAGNNNCTG 1 cut(s) 227
AoxI GGCC 4 cut(s) 106, 315, 593, 987
ApaI GGGCCC 1 cut(s) 597
ApeKI GCWGC 5 cut(s) 221, 224, 257, 283, 901
ApoI RAATTY 3 cut(s) 586, 725, 879
ArsI GACNNNNNNTTYG 2 cut(s) 370, 402
AspLEI GCGC 2 cut(s) 353, 833
AspS9I GGNCC 6 cut(s) 307, 316, 439, 593, 594, 813
AsuC2I CCSGG 1 cut(s) 311
AsuHPI GGTGA 3 cut(s) 234, 347, 862
AvaII GGWCC 3 cut(s) 307, 439, 813
BaeGI GKGCMC 2 cut(s) 8, 597
BanI GGYRCC 1 cut(s) 5
BanII GRGCYC 1 cut(s) 597
BarI GAAGNNNNNNTAC 2 cut(s) 594, 626
BbrPI CACGTG 1 cut(s) 842
BbsI GAAGAC 1 cut(s) 713
BbvI GCAGC 5 cut(s) 211, 233, 269, 295, 913
BccI CCATC 2 cut(s) 477, 841
BciT130I CCWGG 1 cut(s) 954
BclI TGATCA 1 cut(s) 325
BcnI CCSGG 1 cut(s) 311
BcoDI GTCTC 1 cut(s) 960
BfaI CTAG 1 cut(s) 614
BfmI CTRYAG 1 cut(s) 763
BfoI RGCGCY 1 cut(s) 354
BglI GCCNNNNNGGC 1 cut(s) 986
BisI GCNGC 5 cut(s) 222, 225, 258, 284, 902
BlsI GCNGC 5 cut(s) 223, 226, 259, 285, 903
Bme1390I CCNGG 2 cut(s) 311, 954
Bme18I GGWCC 3 cut(s) 307, 439, 813
BmgT120I GGNCC 6 cut(s) 307, 316, 439, 593, 594, 813
BmiI GGNNCC 3 cut(s) 7, 595, 814
BmrFI CCNGG 2 cut(s) 311, 954
BmsI GCATC 6 cut(s) 286, 512, 544, 768, 813, 913
BpiI GAAGAC 1 cut(s) 713
BpmI CTGGAG 1 cut(s) 741
BpuMI CCSGG 1 cut(s) 311
BsaAI YACGTR 1 cut(s) 842
BsaJI CCNNGG 1 cut(s) 953
Bsc4I CCNNNNNNNGG 2 cut(s) 37, 955
Bse1I ACTGG 1 cut(s) 492
Bse3DI GCAATG 1 cut(s) 744
BseBI CCWGG 1 cut(s) 954
BseDI CCNNGG 1 cut(s) 953
BseGI GGATG 6 cut(s) 279, 450, 469, 503, 559, 880
BseLI CCNNNNNNNGG 2 cut(s) 37, 955
BseMI GCAATG 1 cut(s) 744
BseMII CTCAG 1 cut(s) 931
BseNI ACTGG 1 cut(s) 492
BseSI GKGCMC 2 cut(s) 8, 597
BseXI GCAGC 5 cut(s) 211, 233, 269, 295, 913
BsgI GTGCAG 1 cut(s) 276
Bsh1236I CGCG 2 cut(s) 294, 833
BshFI GGCC 4 cut(s) 108, 317, 595, 989
BshNI GGYRCC 1 cut(s) 5
BsiSI CCGG 1 cut(s) 310
BslFI GGGAC 1 cut(s) 87
BslI CCNNNNNNNGG 2 cut(s) 37, 955
BsmAI GTCTC 1 cut(s) 960
BsmFI GGGAC 1 cut(s) 87
BsmI GAATGC 2 cut(s) 53, 636
BsnI GGCC 4 cut(s) 108, 317, 595, 989
Bsp120I GGGCCC 1 cut(s) 593
Bsp1286I GDGCHC 2 cut(s) 8, 597
Bsp143I GATC 2 cut(s) 193, 325
BspACI CCGC 1 cut(s) 115
BspANI GGCC 4 cut(s) 108, 317, 595, 989
BspCNI CTCAG 1 cut(s) 930
BspFNI CGCG 2 cut(s) 294, 833
BspHI TCATGA 1 cut(s) 61
BspLI GGNNCC 3 cut(s) 7, 595, 814
BspT107I GGYRCC 1 cut(s) 5
BsrDI GCAATG 1 cut(s) 744
BsrI ACTGG 1 cut(s) 492
BssECI CCNNGG 1 cut(s) 953
BssMI GATC 2 cut(s) 193, 325
BssNAI GTATAC 1 cut(s) 693
Bst1107I GTATAC 1 cut(s) 693
Bst2UI CCWGG 1 cut(s) 954
Bst4CI ACNGT 2 cut(s) 748, 938
BstAPI GCANNNNNTGC 1 cut(s) 500
BstBAI YACGTR 1 cut(s) 842
BstC8I GCNNGC 2 cut(s) 106, 802
BstDEI CTNAG 2 cut(s) 623, 917
BstF5I GGATG 6 cut(s) 279, 450, 469, 503, 559, 880
BstFNI CGCG 2 cut(s) 294, 833
BstH2I RGCGCY 1 cut(s) 354
BstHHI GCGC 2 cut(s) 353, 833
BstKTI GATC 2 cut(s) 196, 328
BstMAI GTCTC 1 cut(s) 960
BstMBI GATC 2 cut(s) 193, 325
BstMWI GCNNNNNNNGC 4 cut(s) 114, 500, 633, 986
BstNI CCWGG 1 cut(s) 954
BstNSI RCATGY 1 cut(s) 25
BstSCI CCNGG 2 cut(s) 309, 952
BstSFI CTRYAG 1 cut(s) 763
BstSLI GKGCMC 2 cut(s) 8, 597
BstUI CGCG 2 cut(s) 294, 833
BstV1I GCAGC 5 cut(s) 211, 233, 269, 295, 913
BstV2I GAAGAC 1 cut(s) 713
BstZ17I GTATAC 1 cut(s) 693
BsuRI GGCC 4 cut(s) 108, 317, 595, 989
BtgZI GCGATG 1 cut(s) 309
BtsCI GGATG 6 cut(s) 279, 450, 469, 503, 559, 880
BtsIMutI CAGTG 1 cut(s) 943
Cac8I GCNNGC 2 cut(s) 106, 802
CaiI CAGNNNCTG 1 cut(s) 227
CciI TCATGA 1 cut(s) 61
CfoI GCGC 2 cut(s) 353, 833
Cfr13I GGNCC 6 cut(s) 307, 316, 439, 593, 594, 813
Csp6I GTAC 2 cut(s) 611, 700
CviAII CATG 8 cut(s) 22, 62, 268, 287, 686, 817, 871, 905
CviQI GTAC 2 cut(s) 611, 700
DdeI CTNAG 2 cut(s) 623, 917
DpnI GATC 2 cut(s) 195, 327
DpnII GATC 2 cut(s) 193, 325
EaeI YGGCCR 1 cut(s) 106
Eco24I GRGCYC 1 cut(s) 597
Eco32I GATATC 1 cut(s) 448
Eco47I GGWCC 3 cut(s) 307, 439, 813
Eco57I CTGAAG 2 cut(s) 725, 882
Eco72I CACGTG 1 cut(s) 842
EcoO109I RGGNCCY 2 cut(s) 316, 593
EcoRI GAATTC 1 cut(s) 586
EcoRII CCWGG 1 cut(s) 952
EcoRV GATATC 1 cut(s) 448
EcoT22I ATGCAT 2 cut(s) 761, 928
EcoT38I GRGCYC 1 cut(s) 597
FaeI CATG 8 cut(s) 25, 65, 271, 290, 689, 820, 874, 908
FaqI GGGAC 1 cut(s) 87
FatI CATG 8 cut(s) 21, 61, 267, 286, 685, 816, 870, 904
FauI CCCGC 1 cut(s) 122
FbaI TGATCA 1 cut(s) 325
FblI GTMKAC 2 cut(s) 692, 867
Fnu4HI GCNGC 5 cut(s) 222, 225, 258, 284, 902
FokI GGATG 6 cut(s) 286, 437, 456, 490, 566, 887
FriOI GRGCYC 1 cut(s) 597
Fsp4HI GCNGC 5 cut(s) 222, 225, 258, 284, 902
FspBI CTAG 1 cut(s) 614
GlaI GCGC 2 cut(s) 352, 832
GluI GCNGC 5 cut(s) 222, 225, 258, 284, 902
GsuI CTGGAG 1 cut(s) 741
HaeII RGCGCY 1 cut(s) 354
HaeIII GGCC 4 cut(s) 108, 317, 595, 989
HapII CCGG 1 cut(s) 310
HhaI GCGC 2 cut(s) 353, 833
Hin1II CATG 8 cut(s) 25, 65, 271, 290, 689, 820, 874, 908
Hin6I GCGC 2 cut(s) 351, 831
HinP1I GCGC 2 cut(s) 351, 831
HinfI GANTC 3 cut(s) 58, 65, 180
HpaII CCGG 1 cut(s) 310
HphI GGTGA 3 cut(s) 234, 347, 862
Hpy166II GTNNAC 3 cut(s) 693, 853, 868
Hpy188I TCNGA 3 cut(s) 417, 553, 920
Hpy188III TCNNGA 3 cut(s) 38, 62, 720
Hpy8I GTNNAC 3 cut(s) 693, 853, 868
HpyAV CCTTC 1 cut(s) 404
HpyCH4III ACNGT 2 cut(s) 748, 938
HpyCH4IV ACGT 1 cut(s) 841
HpyCH4V TGCA 8 cut(s) 51, 257, 299, 503, 557, 759, 800, 926
HpyF10VI GCNNNNNNNGC 4 cut(s) 114, 500, 633, 986
HpyF3I CTNAG 2 cut(s) 623, 917
HpySE526I ACGT 1 cut(s) 841
Hsp92II CATG 8 cut(s) 25, 65, 271, 290, 689, 820, 874, 908
HspAI GCGC 2 cut(s) 351, 831
Ksp22I TGATCA 1 cut(s) 325
Kzo9I GATC 2 cut(s) 193, 325
LmnI GCTCC 1 cut(s) 633
Lsp1109I GCAGC 5 cut(s) 211, 233, 269, 295, 913
LweI GCATC 6 cut(s) 286, 512, 544, 768, 813, 913
MaeI CTAG 1 cut(s) 614
MaeII ACGT 1 cut(s) 841
MaeIII GTNAC 3 cut(s) 335, 932, 938
MalI GATC 2 cut(s) 195, 327
MboI GATC 2 cut(s) 193, 325
MboII GAAGA 2 cut(s) 432, 718
MfeI CAATTG 2 cut(s) 86, 300
MhlI GDGCHC 2 cut(s) 8, 597
MluCI AATT 7 cut(s) 86, 153, 248, 300, 586, 725, 879
MlyI GAGTC 1 cut(s) 174
MmeI TCCRAC 2 cut(s) 417, 531
MnlI CCTC 7 cut(s) 157, 307, 423, 474, 555, 574, 891
Mph1103I ATGCAT 2 cut(s) 761, 928
MseI TTAA 2 cut(s) 648, 894
MslI CAYNNNNRTG 3 cut(s) 11, 272, 678
MspA1I CMGCKG 1 cut(s) 224
MspI CCGG 1 cut(s) 310
MspR9I CCNGG 2 cut(s) 311, 954
MunI CAATTG 2 cut(s) 86, 300
Mva1269I GAATGC 2 cut(s) 53, 636
MvaI CCWGG 1 cut(s) 954
MvnI CGCG 2 cut(s) 294, 833
MwoI GCNNNNNNNGC 4 cut(s) 114, 500, 633, 986
NciI CCSGG 1 cut(s) 311
NdeII GATC 2 cut(s) 193, 325
NlaIII CATG 8 cut(s) 25, 65, 271, 290, 689, 820, 874, 908
NlaIV GGNNCC 3 cut(s) 7, 595, 814
NmuCI GTSAC 3 cut(s) 335, 932, 938
NsiI ATGCAT 2 cut(s) 761, 928
NspI RCATGY 1 cut(s) 25
PagI TCATGA 1 cut(s) 61
PciI ACATGT 1 cut(s) 21
PctI GAATGC 2 cut(s) 53, 636
PfeI GAWTC 2 cut(s) 58, 65
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 5 cut(s) 223, 226, 259, 285, 903
PleI GAGTC 1 cut(s) 174
PmaCI CACGTG 1 cut(s) 842
PmlI CACGTG 1 cut(s) 842
PpsI GAGTC 1 cut(s) 174
Ppu21I YACGTR 1 cut(s) 842
PscI ACATGT 1 cut(s) 21
Psp6I CCWGG 1 cut(s) 952
PspCI CACGTG 1 cut(s) 842
PspGI CCWGG 1 cut(s) 952
PspN4I GGNNCC 3 cut(s) 7, 595, 814
PspOMI GGGCCC 1 cut(s) 593
PspPI GGNCC 6 cut(s) 307, 316, 439, 593, 594, 813
PstNI CAGNNNCTG 1 cut(s) 227
PvuII CAGCTG 1 cut(s) 224
RsaI GTAC 2 cut(s) 612, 701
RsaNI GTAC 2 cut(s) 611, 700
RseI CAYNNNNRTG 3 cut(s) 11, 272, 678
SaqAI TTAA 2 cut(s) 648, 894
SatI GCNGC 5 cut(s) 222, 225, 258, 284, 902
Sau3AI GATC 2 cut(s) 193, 325
Sau96I GGNCC 6 cut(s) 307, 316, 439, 593, 594, 813
SchI GAGTC 1 cut(s) 174
ScrFI CCNGG 2 cut(s) 311, 954
SduI GDGCHC 2 cut(s) 8, 597
SfaNI GCATC 6 cut(s) 286, 512, 544, 768, 813, 913
SfcI CTRYAG 1 cut(s) 763
SinI GGWCC 3 cut(s) 307, 439, 813
SmiMI CAYNNNNRTG 3 cut(s) 11, 272, 678
Sse9I AATT 7 cut(s) 86, 153, 248, 300, 586, 725, 879
SsiI CCGC 1 cut(s) 115
SspMI CTAG 1 cut(s) 614
StyD4I CCNGG 2 cut(s) 309, 952
TaaI ACNGT 2 cut(s) 748, 938
TaiI ACGT 1 cut(s) 844
TaqI TCGA 1 cut(s) 376
TaqII GACCGA 1 cut(s) 836
TasI AATT 7 cut(s) 86, 153, 248, 300, 586, 725, 879
TatI WGTACW 1 cut(s) 610
TfiI GAWTC 2 cut(s) 58, 65
Tru1I TTAA 2 cut(s) 648, 894
Tru9I TTAA 2 cut(s) 648, 894
TscAI CASTG 1 cut(s) 943
TseFI GTSAC 3 cut(s) 335, 932, 938
TseI GCWGC 5 cut(s) 221, 224, 257, 283, 901
Tsp45I GTSAC 3 cut(s) 335, 932, 938
TspDTI ATGAA 4 cut(s) 50, 303, 755, 891
TspGWI ACGGA 2 cut(s) 574, 646
TspRI CASTG 1 cut(s) 943
VpaK11BI GGWCC 3 cut(s) 307, 439, 813
XapI RAATTY 3 cut(s) 586, 725, 879
XceI RCATGY 1 cut(s) 25
XmiI GTMKAC 2 cut(s) 692, 867
XspI CTAG 1 cut(s) 614
Zsp2I ATGCAT 2 cut(s) 761, 928
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.