Rorug03G0284700

Annexin A13-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0017739
Physical Location & Seq
Forward (+)
28618751 .. 28621298
2548 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0284700.1

Sequence Viewer

Length: 1587 bp
ATGATCACTGCCAGACGCCATGGCTGGCAACGCCCCTTCCATCCTTTGCAGATGGTGGGAATCGCGGTTTTTAGTTTTCTGGTGGTGACCTTCTACACATTCCTGGGACTTTTCCTGGGAAATCGAATCGCGGAGATTACAGTCACCACAGTCTTCTCCATGGTTGCTGTTTCGGTCATGTTTCTCTTCATCCGGTGCACCGCGACGGACCCAACTGACAGAACCAGCTTCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGCTCCAGAGGAGGTGGTAAAGGGTACCCGGAACTTAATCACTGGTTCATTCTGGGGCAGATTATGGTCAGGTTCTTGAGGAGAGTGGAGAAGAAGCTTCTTAGGACTTTTATAAGGAGGAGTTATCTGGATCCGTGGAAGACCAGCACTCATATGGAGCCGTTGGTTCCTTTTCCATTTGTGCTCATGAAAGACGACGACGCTGTCTCTCCCGATCTCAGAGAAGACGACATCTCGTTTTGTGCACTCTGCGACTTCGAGGTGAAAAAACGAAGCAAGCACTGCAGGACATGCAACCGGTGCGTTGAAGGCTTCGATCACCACTGCAGGTGGTTAAACAACTGTGTTGGTAAAAAGAACTACACCACATTCATTCTTCTGATGGTTTTCGTTTTGTTACTTTTGATCATAGAAGGAGGAACAGCAATTGCCATATTTGTCAGGTGCTTCACCGATAAAAATGGAATAGAGCAGGAGCTGAAGAGGAAACTCTACCTAGACTTTCCAAGAGCTGTTCTTGCCACAATATCGGTCTTGCTAACTCTATTGACAGCTTATGGTTCAGCAGCAATGGGACAGCTTTTTTTCTTTCATGTGGTCCTCATCAAGAAGGGAATCAGAACATATGACTATATCCTGGCAATGAAAGAGGAGATCAACCAGTCTATGGAAATGGATCCATTTAATGATGATTCAGATTTCTCCTCAGATGAGAGCATTAGTGATTTTGATTCACCCGAAAAGCCGTCATGTGTATCAAGGTTTATATGCAGAGGACATGATGCAGGAATTCAGAATCCCAGAAGGCTGTCCATAAGAATTGATGGAGATCCTCAGCCCTCCACGTCAACCAAGCCACAAGGTTTCCGCGTCAGCATTAATCCATGGAGGCTGATAAAGTTGAGCAAAGAGAAGGCATTGCTCGCAGCTGAGAAAGCCAGAGAAAGAATTTTGAAACAGAAGCCATCTGCAGAGCATGATTCATTGAGACCACTACCATTAGAGACGAAATCCGGACCATTGACGATGAGCACAGATAGAACCACAGCCACTGCAACTACAGCAGGATCAGGCTTAACACCTTTAATATCGAAAGGGGGGTGGATGCCAGGGTCACCCGTCGCAAAGTTTTCAAGCCCAAGAAGGAGGTTTTCTGGCTCACCAACTATGTTCACTGGCATTGTTCCCTCACCAAAGCACAAGTACAAAAGTAACTTTGACTTGAAGTTGACAGAGGTGTCCAGGGAGCTGGAGACCTATATCTCGAGGCAGGTTCTGTGTTCTGTTATAAAGAAGGATGGCAGTGAAGCATCCCCAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0006950 GO:0006970 GO:0008150 GO:0009266 GO:0009408 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0010035 GO:0042221 GO:0050896 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Annexin

Protein Analysis

528

Amino Acids

59.92

Weight (kDa)

9.75

Isoelectric Point (pI)

46.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHHC PF01529 164 - 300 6.1e-32 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017739)

Species Orthologous Gene IDs
malus_domestica MD12G1007300.v1.1
prunus_persica Prupe.7G008200_v2.0.a1
pyrus_communis pycom12g00530
rosa_chinensis RchiOBHm_Chr3g0496581
rosa_laevigata RLG00000022517
rosa_roxburghii Rroxscaffold_6G00388900
rosa_rugosa Rorug03G0284700
rosa_samantha Rh3AG329900 Rh3BG365700 Rh3CG362700 Rh3DG365900
rosa_wichuraiana Rw3G028870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 377, 1553
AarI CACCTGC 1 cut(s) 582
AasI GACNNNNNNGTC 2 cut(s) 467, 1501
Acc36I ACCTGC 2 cut(s) 582, 1525
Acc65I GGTACC 1 cut(s) 288
AccB1I GGYRCC 1 cut(s) 288
AccB7I CCANNNNNTGG 1 cut(s) 931
AccII CGCG 4 cut(s) 65, 131, 203, 1134
AccIII TCCGGA 1 cut(s) 1277
AciI CCGC 4 cut(s) 65, 131, 201, 1132
AclWI GGATC 6 cut(s) 389, 402, 935, 948, 1088, 1339
AcsI RAATTY 2 cut(s) 1053, 1212
AcuI CTGAAG 1 cut(s) 764
AcyI GRCGYC 1 cut(s) 16
AfaI GTAC 2 cut(s) 290, 1469
AfiI CCNNNNNNNGG 1 cut(s) 931
AgeI ACCGGT 1 cut(s) 561
AgsI TTSAA 5 cut(s) 232, 572, 1219, 1398, 1489
AjiI CACGTC 1 cut(s) 1110
AjnI CCWGG 5 cut(s) 102, 114, 900, 1372, 1505
AluBI AGCT 8 cut(s) 228, 361, 742, 776, 818, 844, 1193, 1513
AluI AGCT 8 cut(s) 228, 361, 742, 776, 818, 844, 1193, 1513
Alw21I GWGCWC 4 cut(s) 200, 450, 511, 1298
Alw26I GTCTC 4 cut(s) 475, 1246, 1262, 1511
Alw44I GTGCAC 2 cut(s) 196, 507
AlwI GGATC 6 cut(s) 389, 402, 935, 948, 1088, 1339
AlwNI CAGNNNCTG 3 cut(s) 742, 1316, 1540
Ama87I CYCGRG 1 cut(s) 1528
Aor13HI TCCGGA 1 cut(s) 1277
ApaLI GTGCAC 2 cut(s) 196, 507
ApeKI GCWGC 2 cut(s) 830, 1190
ApoI RAATTY 2 cut(s) 1053, 1212
AseI ATTAAT 1 cut(s) 1143
AsiGI ACCGGT 1 cut(s) 561
Asp718I GGTACC 1 cut(s) 288
AspS9I GGNCC 3 cut(s) 208, 862, 1280
AsuC2I CCSGG 1 cut(s) 293
AsuHPI GGTGA 9 cut(s) 97, 136, 538, 575, 706, 990, 1371, 1416, 1446
AvaI CYCGRG 1 cut(s) 1528
AvaII GGWCC 3 cut(s) 208, 862, 1280
BaeGI GKGCMC 2 cut(s) 200, 511
BamHI GGATCC 2 cut(s) 394, 940
BanI GGYRCC 1 cut(s) 288
BbsI GAAGAC 3 cut(s) 145, 410, 495
Bbv12I GWGCWC 4 cut(s) 200, 450, 511, 1298
BbvCI CCTCAGC 1 cut(s) 1098
BbvI GCAGC 2 cut(s) 842, 1202
BccI CCATC 6 cut(s) 46, 48, 640, 1082, 1237, 1556
BceAI ACGGC 2 cut(s) 409, 994
BciT130I CCWGG 5 cut(s) 104, 116, 902, 1374, 1507
BclI TGATCA 2 cut(s) 3, 669
BcnI CCSGG 1 cut(s) 293
BcoDI GTCTC 4 cut(s) 475, 1246, 1262, 1511
BfaI CTAG 1 cut(s) 761
BfmI CTRYAG 4 cut(s) 547, 589, 1233, 1323
BfuAI ACCTGC 2 cut(s) 582, 1525
BisI GCNGC 2 cut(s) 831, 1191
BlsI GCNGC 2 cut(s) 832, 1192
Bme1390I CCNGG 6 cut(s) 104, 116, 293, 902, 1374, 1507
Bme18I GGWCC 3 cut(s) 208, 862, 1280
BmeT110I CYCGRG 1 cut(s) 1528
BmgBI CACGTC 1 cut(s) 1110
BmgT120I GGNCC 3 cut(s) 208, 862, 1280
BmiI GGNNCC 7 cut(s) 210, 268, 290, 396, 423, 432, 942
BmrFI CCNGG 6 cut(s) 104, 116, 293, 902, 1374, 1507
BmsI GCATC 3 cut(s) 1036, 1359, 1583
BpiI GAAGAC 3 cut(s) 145, 410, 495
BpmI CTGGAG 2 cut(s) 253, 1535
Bpu10I CCTNAGC 1 cut(s) 1098
BpuEI CTTGAG 1 cut(s) 361
BpuMI CCSGG 1 cut(s) 293
BsaBI GATNNNNATC 1 cut(s) 1092
BsaHI GRCGYC 1 cut(s) 16
BsaI GGTCTC 2 cut(s) 1246, 1511
BsaJI CCNNGG 8 cut(s) 19, 103, 115, 159, 398, 1148, 1373, 1506
BsaWI WCCGGW 3 cut(s) 192, 561, 1277
Bsc4I CCNNNNNNNGG 1 cut(s) 931
Bse118I RCCGGY 1 cut(s) 561
Bse1I ACTGG 3 cut(s) 311, 925, 1444
Bse3DI GCAATG 3 cut(s) 840, 912, 1181
Bse8I GATNNNNATC 1 cut(s) 1092
BseAI TCCGGA 1 cut(s) 1277
BseBI CCWGG 5 cut(s) 104, 116, 902, 1374, 1507
BseDI CCNNGG 8 cut(s) 19, 103, 115, 159, 398, 1148, 1373, 1506
BseGI GGATG 5 cut(s) 40, 189, 1374, 1567, 1574
BseJI GATNNNNATC 1 cut(s) 1092
BseLI CCNNNNNNNGG 1 cut(s) 931
BseMI GCAATG 3 cut(s) 840, 912, 1181
BseMII CTCAG 4 cut(s) 496, 984, 1112, 1185
BseNI ACTGG 3 cut(s) 311, 925, 1444
BseRI GAGGAG 5 cut(s) 288, 358, 397, 929, 958
BseSI GKGCMC 2 cut(s) 200, 511
BseXI GCAGC 2 cut(s) 842, 1202
Bsh1236I CGCG 4 cut(s) 65, 131, 203, 1134
BshNI GGYRCC 1 cut(s) 288
BshTI ACCGGT 1 cut(s) 561
BsiHKAI GWGCWC 4 cut(s) 200, 450, 511, 1298
BsiHKCI CYCGRG 1 cut(s) 1528
BsiSI CCGG 4 cut(s) 193, 293, 562, 1278
BslFI GGGAC 2 cut(s) 120, 852
BslI CCNNNNNNNGG 1 cut(s) 931
BsmAI GTCTC 4 cut(s) 475, 1246, 1262, 1511
BsmBI CGTCTC 1 cut(s) 1262
BsmFI GGGAC 2 cut(s) 120, 852
Bso31I GGTCTC 2 cut(s) 1246, 1511
BsoBI CYCGRG 1 cut(s) 1528
Bsp1286I GDGCHC 4 cut(s) 200, 450, 511, 1298
Bsp13I TCCGGA 1 cut(s) 1277
Bsp143I GATC 9 cut(s) 3, 394, 478, 580, 669, 918, 940, 1093, 1331
Bsp19I CCATGG 3 cut(s) 19, 159, 1148
BspACI CCGC 4 cut(s) 65, 131, 201, 1132
BspCNI CTCAG 4 cut(s) 495, 983, 1111, 1186
BspEI TCCGGA 1 cut(s) 1277
BspFNI CGCG 4 cut(s) 65, 131, 203, 1134
BspHI TCATGA 1 cut(s) 450
BspLI GGNNCC 7 cut(s) 210, 268, 290, 396, 423, 432, 942
BspMAI CTGCAG 3 cut(s) 551, 593, 1237
BspMI ACCTGC 2 cut(s) 582, 1525
BspPI GGATC 6 cut(s) 389, 402, 935, 948, 1088, 1339
BspT107I GGYRCC 1 cut(s) 288
BspTNI GGTCTC 2 cut(s) 1246, 1511
BsrDI GCAATG 3 cut(s) 840, 912, 1181
BsrFI RCCGGY 1 cut(s) 561
BsrI ACTGG 3 cut(s) 311, 925, 1444
BssAI RCCGGY 1 cut(s) 561
BssECI CCNNGG 8 cut(s) 19, 103, 115, 159, 398, 1148, 1373, 1506
BssMI GATC 9 cut(s) 3, 394, 478, 580, 669, 918, 940, 1093, 1331
BssNI GRCGYC 1 cut(s) 16
BssT1I CCWWGG 3 cut(s) 19, 159, 1148
Bst2UI CCWGG 5 cut(s) 104, 116, 902, 1374, 1507
Bst4CI ACNGT 3 cut(s) 142, 151, 608
Bst6I CTCTTC 2 cut(s) 191, 740
BstACI GRCGYC 1 cut(s) 16
BstAPI GCANNNNNTGC 3 cut(s) 546, 555, 564
BstC8I GCNNGC 3 cut(s) 26, 542, 1188
BstDEI CTNAG 5 cut(s) 365, 482, 970, 1098, 1194
BstDSI CCRYGG 4 cut(s) 19, 159, 398, 1148
BstEII GGTNACC 2 cut(s) 85, 1377
BstF5I GGATG 5 cut(s) 40, 189, 1374, 1567, 1574
BstFNI CGCG 4 cut(s) 65, 131, 203, 1134
BstKTI GATC 9 cut(s) 6, 397, 481, 583, 672, 921, 943, 1096, 1334
BstMAI GTCTC 4 cut(s) 475, 1246, 1262, 1511
BstMBI GATC 9 cut(s) 3, 394, 478, 580, 669, 918, 940, 1093, 1331
BstMWI GCNNNNNNNGC 9 cut(s) 30, 546, 555, 564, 573, 782, 1187, 1199, 1325
BstNI CCWGG 5 cut(s) 104, 116, 902, 1374, 1507
BstNSI RCATGY 1 cut(s) 558
BstPI GGTNACC 2 cut(s) 85, 1377
BstSCI CCNGG 6 cut(s) 102, 114, 291, 900, 1372, 1505
BstSFI CTRYAG 4 cut(s) 547, 589, 1233, 1323
BstSLI GKGCMC 2 cut(s) 200, 511
BstUI CGCG 4 cut(s) 65, 131, 203, 1134
BstV1I GCAGC 2 cut(s) 842, 1202
BstV2I GAAGAC 3 cut(s) 145, 410, 495
BstX2I RGATCY 3 cut(s) 394, 940, 1093
BstXI CCANNNNNNTGG 1 cut(s) 1513
BstYI RGATCY 3 cut(s) 394, 940, 1093
BtgI CCRYGG 4 cut(s) 19, 159, 398, 1148
BtrI CACGTC 1 cut(s) 1110
BtsCI GGATG 5 cut(s) 40, 189, 1374, 1567, 1574
BtsI GCAGTG 5 cut(s) 6, 544, 586, 1314, 1573
BtsIMutI CAGTG 7 cut(s) 6, 304, 544, 586, 1314, 1437, 1573
BveI ACCTGC 2 cut(s) 582, 1525
Cac8I GCNNGC 3 cut(s) 26, 542, 1188
CaiI CAGNNNCTG 3 cut(s) 742, 1316, 1540
CciI TCATGA 1 cut(s) 450
Cfr10I RCCGGY 1 cut(s) 561
Cfr13I GGNCC 3 cut(s) 208, 862, 1280
CseI GACGC 3 cut(s) 24, 473, 1123
Csp6I GTAC 2 cut(s) 289, 1468
CspAI ACCGGT 1 cut(s) 561
CviQI GTAC 2 cut(s) 289, 1468
DdeI CTNAG 5 cut(s) 365, 482, 970, 1098, 1194
DpnI GATC 9 cut(s) 5, 396, 480, 582, 671, 920, 942, 1095, 1333
DpnII GATC 9 cut(s) 3, 394, 478, 580, 669, 918, 940, 1093, 1331
DrdI GACNNNNNNGTC 2 cut(s) 467, 1501
DseDI GACNNNNNNGTC 2 cut(s) 467, 1501
Eam1104I CTCTTC 2 cut(s) 191, 740
EarI CTCTTC 2 cut(s) 191, 740
Eco130I CCWWGG 3 cut(s) 19, 159, 1148
Eco31I GGTCTC 2 cut(s) 1246, 1511
Eco47I GGWCC 3 cut(s) 208, 862, 1280
Eco57I CTGAAG 1 cut(s) 764
Eco88I CYCGRG 1 cut(s) 1528
Eco91I GGTNACC 2 cut(s) 85, 1377
EcoO65I GGTNACC 2 cut(s) 85, 1377
EcoRI GAATTC 1 cut(s) 1053
EcoRII CCWGG 5 cut(s) 102, 114, 900, 1372, 1505
EcoT14I CCWWGG 3 cut(s) 19, 159, 1148
ErhI CCWWGG 3 cut(s) 19, 159, 1148
Esp3I CGTCTC 1 cut(s) 1262
FaqI GGGAC 2 cut(s) 120, 852
FauNDI CATATG 2 cut(s) 417, 889
FbaI TGATCA 2 cut(s) 3, 669
Fnu4HI GCNGC 2 cut(s) 831, 1191
FokI GGATG 5 cut(s) 27, 176, 1381, 1561, 1574
Fsp4HI GCNGC 2 cut(s) 831, 1191
FspBI CTAG 1 cut(s) 761
GluI GCNGC 2 cut(s) 831, 1191
GsuI CTGGAG 2 cut(s) 253, 1535
HapII CCGG 4 cut(s) 193, 293, 562, 1278
HgaI GACGC 3 cut(s) 24, 473, 1123
Hin1I GRCGYC 1 cut(s) 16
HincII GTYRAC 2 cut(s) 1113, 1494
HindII GTYRAC 2 cut(s) 1113, 1494
HindIII AAGCTT 1 cut(s) 359
HinfI GANTC 7 cut(s) 60, 126, 879, 956, 995, 1060, 1244
HpaII CCGG 4 cut(s) 193, 293, 562, 1278
HphI GGTGA 9 cut(s) 97, 136, 538, 575, 706, 990, 1371, 1416, 1446
Hpy166II GTNNAC 5 cut(s) 198, 509, 1113, 1437, 1494
Hpy188I TCNGA 6 cut(s) 485, 645, 884, 961, 973, 1059
Hpy188III TCNNGA 9 cut(s) 232, 270, 340, 392, 451, 476, 871, 1278, 1528
Hpy8I GTNNAC 5 cut(s) 198, 509, 1113, 1437, 1494
Hpy99I CGWCG 4 cut(s) 208, 464, 467, 1388
HpyAV CCTTC 9 cut(s) 46, 100, 566, 671, 868, 1062, 1171, 1401, 1552
HpyCH4III ACNGT 3 cut(s) 142, 151, 608
HpyCH4IV ACGT 1 cut(s) 1109
HpyF10VI GCNNNNNNNGC 9 cut(s) 30, 546, 555, 564, 573, 782, 1187, 1199, 1325
HpyF3I CTNAG 5 cut(s) 365, 482, 970, 1098, 1194
HpySE526I ACGT 1 cut(s) 1109
Hsp92I GRCGYC 1 cut(s) 16
Kpn2I TCCGGA 1 cut(s) 1277
KpnI GGTACC 1 cut(s) 292
Ksp22I TGATCA 2 cut(s) 3, 669
Kzo9I GATC 9 cut(s) 3, 394, 478, 580, 669, 918, 940, 1093, 1331
LmnI GCTCC 4 cut(s) 272, 421, 739, 1510
Lsp1109I GCAGC 2 cut(s) 842, 1202
LweI GCATC 3 cut(s) 1036, 1359, 1583
MaeI CTAG 1 cut(s) 761
MaeII ACGT 1 cut(s) 1109
MaeIII GTNAC 5 cut(s) 85, 142, 660, 1377, 1475
MalI GATC 9 cut(s) 5, 396, 480, 582, 671, 920, 942, 1095, 1333
MboI GATC 9 cut(s) 3, 394, 478, 580, 669, 918, 940, 1093, 1331
MfeI CAATTG 1 cut(s) 690
MflI RGATCY 3 cut(s) 394, 940, 1093
MhlI GDGCHC 4 cut(s) 200, 450, 511, 1298
MluCI AATT 4 cut(s) 690, 1053, 1083, 1212
MroI TCCGGA 1 cut(s) 1277
MseI TTAA 6 cut(s) 300, 599, 948, 1143, 1340, 1349
MslI CAYNNNNRTG 1 cut(s) 416
MspA1I CMGCKG 1 cut(s) 1193
MspI CCGG 4 cut(s) 193, 293, 562, 1278
MspR9I CCNGG 6 cut(s) 104, 116, 293, 902, 1374, 1507
MunI CAATTG 1 cut(s) 690
MvaI CCWGG 5 cut(s) 104, 116, 902, 1374, 1507
MvnI CGCG 4 cut(s) 65, 131, 203, 1134
MwoI GCNNNNNNNGC 9 cut(s) 30, 546, 555, 564, 573, 782, 1187, 1199, 1325
NciI CCSGG 1 cut(s) 293
NcoI CCATGG 3 cut(s) 19, 159, 1148
NdeI CATATG 2 cut(s) 417, 889
NdeII GATC 9 cut(s) 3, 394, 478, 580, 669, 918, 940, 1093, 1331
NlaIV GGNNCC 7 cut(s) 210, 268, 290, 396, 423, 432, 942
NmuCI GTSAC 3 cut(s) 85, 142, 1377
NspI RCATGY 1 cut(s) 558
PaeR7I CTCGAG 1 cut(s) 1528
PagI TCATGA 1 cut(s) 450
PaqCI CACCTGC 1 cut(s) 582
PfeI GAWTC 7 cut(s) 60, 126, 879, 956, 995, 1060, 1244
PflFI GACNNNGTC 1 cut(s) 467
PflMI CCANNNNNTGG 1 cut(s) 931
PinAI ACCGGT 1 cut(s) 561
PkrI GCNGC 2 cut(s) 832, 1192
PshBI ATTAAT 1 cut(s) 1143
PsiI TTATAA 2 cut(s) 377, 1553
Psp6I CCWGG 5 cut(s) 102, 114, 900, 1372, 1505
PspEI GGTNACC 2 cut(s) 85, 1377
PspGI CCWGG 5 cut(s) 102, 114, 900, 1372, 1505
PspN4I GGNNCC 7 cut(s) 210, 268, 290, 396, 423, 432, 942
PspPI GGNCC 3 cut(s) 208, 862, 1280
PstI CTGCAG 3 cut(s) 551, 593, 1237
PstNI CAGNNNCTG 3 cut(s) 742, 1316, 1540
PsuI RGATCY 3 cut(s) 394, 940, 1093
PsyI GACNNNGTC 1 cut(s) 467
PvuII CAGCTG 1 cut(s) 1193
RsaI GTAC 2 cut(s) 290, 1469
RsaNI GTAC 2 cut(s) 289, 1468
RseI CAYNNNNRTG 1 cut(s) 416
SaqAI TTAA 6 cut(s) 300, 599, 948, 1143, 1340, 1349
SatI GCNGC 2 cut(s) 831, 1191
Sau3AI GATC 9 cut(s) 3, 394, 478, 580, 669, 918, 940, 1093, 1331
Sau96I GGNCC 3 cut(s) 208, 862, 1280
ScrFI CCNGG 6 cut(s) 104, 116, 293, 902, 1374, 1507
SduI GDGCHC 4 cut(s) 200, 450, 511, 1298
SfaNI GCATC 3 cut(s) 1036, 1359, 1583
SfcI CTRYAG 4 cut(s) 547, 589, 1233, 1323
Sfr274I CTCGAG 1 cut(s) 1528
SinI GGWCC 3 cut(s) 208, 862, 1280
SlaI CTCGAG 1 cut(s) 1528
SmiMI CAYNNNNRTG 1 cut(s) 416
SmlI CTYRAG 2 cut(s) 340, 1528
SmoI CTYRAG 2 cut(s) 340, 1528
Sse9I AATT 4 cut(s) 690, 1053, 1083, 1212
SsiI CCGC 4 cut(s) 65, 131, 201, 1132
SspMI CTAG 1 cut(s) 761
StyD4I CCNGG 6 cut(s) 102, 114, 291, 900, 1372, 1505
StyI CCWWGG 3 cut(s) 19, 159, 1148
TaaI ACNGT 3 cut(s) 142, 151, 608
TaiI ACGT 1 cut(s) 1112
TaqI TCGA 5 cut(s) 124, 522, 579, 1355, 1529
TaqII GACCGA 2 cut(s) 163, 784
TasI AATT 4 cut(s) 690, 1053, 1083, 1212
TatI WGTACW 1 cut(s) 1467
TfiI GAWTC 7 cut(s) 60, 126, 879, 956, 995, 1060, 1244
Tru1I TTAA 6 cut(s) 300, 599, 948, 1143, 1340, 1349
Tru9I TTAA 6 cut(s) 300, 599, 948, 1143, 1340, 1349
TscAI CASTG 7 cut(s) 13, 311, 551, 593, 1321, 1444, 1573
TseFI GTSAC 3 cut(s) 85, 142, 1377
TseI GCWGC 2 cut(s) 830, 1190
Tsp45I GTSAC 3 cut(s) 85, 142, 1377
TspDTI ATGAA 7 cut(s) 178, 301, 467, 625, 845, 923, 1236
TspGWI ACGGA 2 cut(s) 221, 387
TspRI CASTG 7 cut(s) 13, 311, 551, 593, 1321, 1444, 1573
Tth111I GACNNNGTC 1 cut(s) 467
Van91I CCANNNNNTGG 1 cut(s) 931
VneI GTGCAC 2 cut(s) 196, 507
VpaK11BI GGWCC 3 cut(s) 208, 862, 1280
VspI ATTAAT 1 cut(s) 1143
XapI RAATTY 2 cut(s) 1053, 1212
XceI RCATGY 1 cut(s) 558
XcmI CCANNNNNNNNNTGG 1 cut(s) 415
XhoI CTCGAG 1 cut(s) 1528
XspI CTAG 1 cut(s) 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.