Prupe.7G010400_v2.0.a1

Plant protein of unknown function (DUF639)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0012209
Physical Location & Seq
Forward (+)
1383335 .. 1389838
6504 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G010400.1

Sequence Viewer

Length: 2196 bp
ATGGCCATCCAAACGTGGCAGCTCCATCAAGAAACACATCTCACCGCTTCTTTCTTCACCCTATTAAGCCAAAGGTTTTCTCTGCAAATCACACTACTTCTGCAACCTCATCTGAACGTTGCAACCAACTCAACAATGGCAAACAGATTGAAACATCTTTCCTCCATTGCCAACGACGTCGTACAAAGCTGTGCTTTAAAATTGAAAACTCCTGTGGAGAAACTGGTGGAGGAATTTGAGACAACATGGAAGGCAGATGAAACGGCGCCGGTTGGTCATAATATTACTGCTACTAATAACAACAACAATAGTTACGGGAGGAAATTTGTAGAATTCTGCAGTGCCAAGGTTCTGCAGACCAGCGACATTTGCAAAACCATCGAGGAAAAGATTGCGGATGGGTCTTTTAGCCGCTTCACTTTCGACATGATGCTCGCTTGGGAGATGCCCGCTTCAGCGGACGAAGAATCTTTCACGGAGTGTGTGGCAAAGGAGAAAGAAGAGAAAAAAGTACCTGCAAAATTTTCTACAGAACACGATGAGATCTCTCTGTTCTATTCCGACCTCATGCCACTTCTTGTTGATAATGAGCAAGATGTTGGAGAAGATGCATTTGTGTGGTTGGGATCGCTGGTTCCACTAGTTGCAGATGTTGTTAATGGGAGATTTACCTTTGAAACTTTAACAGCACCTACAGGAAACCGGCTCCATTTTCCTGCCTATGACAAATTTTTAAAGGAAATTGACAGATGTATAAAACATTTGCAAAAACATGCAAAGCCCAAGGGTGCGGAGCTTGCAGATGACGAATTCATTTTACACGTGGAGGGAACTGCTAGCACACAGAGAGTAGTGCGCCACATTGGAGGAACAAGTTGGCCTGGTAGGCTTACACTAACAAATTACGCACTCTACTTTGAGGCTTCTGGAGTTATAACATATGAAGATGCCCTTAAAATAGACCTTTCAAAGGACATGGAGCAAAGTGTGAAACCAGCTGCAACAGGGCCATGGGGTGCCCCACTTTTTGACAAGGCTATAGTTTATGAGTCTCCTGATTTATCAGAGGGGATAGTTCTGGAGTTTCCTGAGGTAACAAGCTCTACAAGACGTGACCACTGGCTTGCACTCACAAAGGAGATTATGTTGATGCACCGTTTCCTTGCAAAGTATGAAATAAAATGTCCAATACAAGCATGGGAGATGCATGCAAGGACAATACTGTCAATAACAAGGCTTCATGCAGCAAGAGAAATGCTAAGAATATCACCCCCTACACCGACAAGATTCTTAATTTTTTCCTTGTTTGATGAGTTACCAAAGGGAGACTATGTTCTGGAAGAGCTTGCTGAGAGTCTAAAGAAGGTCAATAGCGGGCACCCATGCAGTGCTAGTTCCATTCTAAGGACTATGAACATGTCAGAGTCAATCATCTCACGTTTAGACGTAACAGAAGCTGGCAAGGAAAGTATAAGTCCAACTGTTCAAGATGAAGACAGTTTCCAACTAGAAACTGCAATTAATCAATCAAGAGAGGAAGAAAAGGAAATTGCTATTGCCAAAGCTACCACAAAGGAACTGAAAGAGGAGGGAATCAGTGAAAGCACTACTATCTTTTTGGAGTTACTAAGGCCCCTTAGAAATTCTGTGCCTTGGTTTGAAGAAGTCCTCACATGGGAAAGACCGTCAACCACCCTTGTTGTGATTGCTGCTGCTTTAATAGTGACTTACCAGGAATGGGTTGGCAAAGCAATAGCAGCTTTCTTGTTGTGGCTGGTTGCAAAGATGTTTAGAGCTAGACTACAAAGGCTTGATACAAAATGCAATGAGATTGTAGTGTGCACTGCATCAGACCAGAGTACAATGGAAAGCATAGTTTCTGCTCAACATGGAATGCAAACTGTGCACGAAATGGTGCAAACAGCAAATGTTTCATTAATGAAGTTGTGGTCCATATTTATTTCGAAGGCTCGCAAGCATGCAGATATGGCAATGATGGCGATGAGTGCGGTAGCAATATTTTTAGCAGTGGTTCCAATGAAGTTAGTTATAATGGCAGGAATATTGTGTTGCTTCACTATGACATTGGCATCGAGGTTAGGGATGAGCAAGGGGGAGAACCAAAGCAGCAGACGACTAAAAGAATGGTGGGATTCAATTCCAGTTATCCCTGTTCGTGTTGTCGATACTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF639

Protein Analysis

732

Amino Acids

82.28

Weight (kDa)

5.62

Isoelectric Point (pI)

43.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G21720 AT2G21720
fragaria_vesca FvH4_1g28470 FvH4_1g28470 FvH4_1g28470
malus_domestica MD12G1008600.v1.1 MD14G1006000.v1.1
prunus_persica Prupe.7G010400_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0496361 RchiOBHm_Chr3g0496371
rosa_laevigata RLG00000022528
rosa_multiflora Rmu_sc0002461.1_g000006
rosa_roxburghii Rroxscaffold_6G00389250
rosa_rugosa Rorug03G0282000
rosa_samantha Rh3AG328600 Rh3BG364700 Rh3CG361700 Rh3DG364700
rosa_wichuraiana Rw3G028770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 935, 2051
AasI GACNNNNNNGTC 1 cut(s) 1222
AatII GACGTC 1 cut(s) 180
Acc36I ACCTGC 1 cut(s) 523
AccB1I GGYRCC 3 cut(s) 265, 1016, 1377
AciI CCGC 8 cut(s) 45, 395, 412, 450, 458, 791, 1374, 2009
AclI AACGTT 1 cut(s) 117
AclWI GGATC 1 cut(s) 634
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 7 cut(s) 233, 323, 332, 521, 728, 809, 1642
AcuI CTGAAG 1 cut(s) 438
AcvI CACGTG 1 cut(s) 823
AcyI GRCGYC 2 cut(s) 177, 266
AdeI CACNNNGTG 1 cut(s) 480
AfaI GTAC 3 cut(s) 183, 513, 1861
AfiI CCNNNNNNNGG 4 cut(s) 970, 1404, 1675, 1738
AflIII ACRYGT 2 cut(s) 820, 1416
AgsI TTSAA 7 cut(s) 151, 205, 677, 969, 1487, 1661, 2157
AhlI ACTAGT 1 cut(s) 640
AjiI CACGTC 1 cut(s) 1112
AjnI CCWGG 2 cut(s) 880, 1731
AloI GAACNNNNNNTCC 4 cut(s) 618, 650, 1317, 1349
Alw21I GWGCWC 2 cut(s) 1844, 1908
Alw26I GTCTC 3 cut(s) 233, 1056, 1320
Alw44I GTGCAC 2 cut(s) 1840, 1904
AlwI GGATC 1 cut(s) 634
AlwNI CAGNNNCTG 1 cut(s) 1457
AoxI GGCC 4 cut(s) 3, 878, 1007, 1631
ApaLI GTGCAC 2 cut(s) 1840, 1904
ApeKI GCWGC 7 cut(s) 19, 998, 1244, 1709, 1712, 1757, 2127
ApoI RAATTY 7 cut(s) 233, 323, 332, 521, 728, 809, 1642
AseI ATTAAT 2 cut(s) 1521, 1937
AspLEI GCGC 2 cut(s) 268, 858
AspS9I GGNCC 3 cut(s) 1007, 1632, 1950
AsuHPI GGTGA 3 cut(s) 34, 49, 1260
AsuII TTCGAA 1 cut(s) 1964
AsuNHI GCTAGC 1 cut(s) 836
AvaII GGWCC 1 cut(s) 1950
AxyI CCTNAGG 1 cut(s) 1089
BaeGI GKGCMC 4 cut(s) 1021, 1380, 1844, 1908
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 3 cut(s) 265, 1016, 1377
BbrPI CACGTG 1 cut(s) 823
BbsI GAAGAC 1 cut(s) 1500
Bbv12I GWGCWC 2 cut(s) 1844, 1908
BbvI GCAGC 7 cut(s) 31, 985, 1256, 1696, 1699, 1769, 2139
BccI CCATC 5 cut(s) 14, 33, 386, 392, 1990
BceAI ACGGC 1 cut(s) 279
BcgI CGANNNNNNTGC 2 cut(s) 361, 395
BciT130I CCWGG 2 cut(s) 882, 1733
BcoDI GTCTC 3 cut(s) 233, 1056, 1320
BcuI ACTAGT 1 cut(s) 640
BfaI CTAG 5 cut(s) 641, 837, 1392, 1508, 1797
BfmI CTRYAG 5 cut(s) 337, 353, 528, 693, 1038
BfoI RGCGCY 1 cut(s) 269
BfuAI ACCTGC 1 cut(s) 523
BglI GCCNNNNNGGC 1 cut(s) 886
BglII AGATCT 1 cut(s) 543
BisI GCNGC 8 cut(s) 20, 412, 999, 1245, 1710, 1713, 1758, 2128
BlsI GCNGC 8 cut(s) 21, 413, 1000, 1246, 1711, 1714, 1759, 2129
Bme1390I CCNGG 2 cut(s) 882, 1733
Bme18I GGWCC 1 cut(s) 1950
BmgBI CACGTC 1 cut(s) 1112
BmgT120I GGNCC 3 cut(s) 1007, 1632, 1950
BmiI GGNNCC 7 cut(s) 267, 636, 707, 1018, 1379, 1634, 2034
BmrFI CCNGG 2 cut(s) 882, 1733
BmsI GCATC 8 cut(s) 420, 435, 598, 937, 1140, 1194, 1856, 2099
BmtI GCTAGC 1 cut(s) 840
BpiI GAAGAC 1 cut(s) 1500
BpmI CTGGAG 2 cut(s) 948, 1100
Bpu14I TTCGAA 1 cut(s) 1964
BsaAI YACGTR 1 cut(s) 823
BsaHI GRCGYC 2 cut(s) 177, 266
BsaJI CCNNGG 4 cut(s) 345, 783, 1010, 1652
BsaXI ACNNNNNCTCC 4 cut(s) 1130, 1160, 1317, 1347
Bsc4I CCNNNNNNNGG 4 cut(s) 970, 1404, 1675, 1738
Bse118I RCCGGY 2 cut(s) 268, 702
Bse1I ACTGG 3 cut(s) 228, 1124, 2162
Bse21I CCTNAGG 1 cut(s) 1089
Bse3DI GCAATG 3 cut(s) 165, 1831, 1998
BseBI CCWGG 2 cut(s) 882, 1733
BseDI CCNNGG 4 cut(s) 345, 783, 1010, 1652
BseGI GGATG 3 cut(s) 6, 403, 2109
BseLI CCNNNNNNNGG 4 cut(s) 970, 1404, 1675, 1738
BseMI GCAATG 3 cut(s) 165, 1831, 1998
BseMII CTCAG 2 cut(s) 1080, 1341
BseNI ACTGG 3 cut(s) 228, 1124, 2162
BseRI GAGGAG 1 cut(s) 1601
BseSI GKGCMC 4 cut(s) 1021, 1380, 1844, 1908
BseXI GCAGC 7 cut(s) 31, 985, 1256, 1696, 1699, 1769, 2139
BshFI GGCC 4 cut(s) 5, 880, 1009, 1633
BshNI GGYRCC 3 cut(s) 265, 1016, 1377
BsiHKAI GWGCWC 2 cut(s) 1844, 1908
BsiSI CCGG 2 cut(s) 269, 703
BslI CCNNNNNNNGG 4 cut(s) 970, 1404, 1675, 1738
BsmAI GTCTC 3 cut(s) 233, 1056, 1320
BsmI GAATGC 1 cut(s) 1899
BsnI GGCC 4 cut(s) 5, 880, 1009, 1633
Bsp119I TTCGAA 1 cut(s) 1964
Bsp1286I GDGCHC 4 cut(s) 1021, 1380, 1844, 1908
Bsp143I GATC 2 cut(s) 543, 626
Bsp19I CCATGG 1 cut(s) 1010
BspACI CCGC 8 cut(s) 45, 395, 412, 450, 458, 791, 1374, 2009
BspANI GGCC 4 cut(s) 5, 880, 1009, 1633
BspCNI CTCAG 2 cut(s) 1081, 1342
BspLI GGNNCC 7 cut(s) 267, 636, 707, 1018, 1379, 1634, 2034
BspMAI CTGCAG 2 cut(s) 341, 357
BspMI ACCTGC 1 cut(s) 523
BspOI GCTAGC 1 cut(s) 840
BspPI GGATC 1 cut(s) 634
BspQI GCTCTTC 1 cut(s) 1335
BspT104I TTCGAA 1 cut(s) 1964
BspT107I GGYRCC 3 cut(s) 265, 1016, 1377
BsrDI GCAATG 3 cut(s) 165, 1831, 1998
BsrFI RCCGGY 2 cut(s) 268, 702
BsrI ACTGG 3 cut(s) 228, 1124, 2162
BssAI RCCGGY 2 cut(s) 268, 702
BssECI CCNNGG 4 cut(s) 345, 783, 1010, 1652
BssMI GATC 2 cut(s) 543, 626
BssNI GRCGYC 2 cut(s) 177, 266
BssT1I CCWWGG 4 cut(s) 345, 783, 1010, 1652
Bst2UI CCWGG 2 cut(s) 882, 1733
Bst4CI ACNGT 6 cut(s) 1157, 1224, 1483, 1499, 1686, 1903
Bst6I CTCTTC 2 cut(s) 495, 1335
BstACI GRCGYC 2 cut(s) 177, 266
BstAPI GCANNNNNTGC 1 cut(s) 1903
BstBAI YACGTR 1 cut(s) 823
BstBI TTCGAA 1 cut(s) 1964
BstDEI CTNAG 6 cut(s) 1089, 1259, 1350, 1403, 1628, 1637
BstDSI CCRYGG 1 cut(s) 1010
BstENI CCTNNNNNAGG 1 cut(s) 968
BstF5I GGATG 3 cut(s) 6, 403, 2109
BstH2I RGCGCY 1 cut(s) 269
BstHHI GCGC 2 cut(s) 268, 858
BstKTI GATC 2 cut(s) 546, 629
BstMAI GTCTC 3 cut(s) 233, 1056, 1320
BstMBI GATC 2 cut(s) 543, 626
BstMWI GCNNNNNNNGC 8 cut(s) 369, 797, 886, 1757, 1903, 1988, 1997, 2006
BstNI CCWGG 2 cut(s) 882, 1733
BstNSI RCATGY 4 cut(s) 776, 1211, 1420, 1982
BstSCI CCNGG 2 cut(s) 880, 1731
BstSFI CTRYAG 5 cut(s) 337, 353, 528, 693, 1038
BstSLI GKGCMC 4 cut(s) 1021, 1380, 1844, 1908
BstV1I GCAGC 7 cut(s) 31, 985, 1256, 1696, 1699, 1769, 2139
BstV2I GAAGAC 1 cut(s) 1500
BstX2I RGATCY 1 cut(s) 543
BstYI RGATCY 1 cut(s) 543
Bsu36I CCTNAGG 1 cut(s) 1089
BsuRI GGCC 4 cut(s) 5, 880, 1009, 1633
BtgI CCRYGG 1 cut(s) 1010
BtgZI GCGATG 1 cut(s) 2015
BtrI CACGTC 1 cut(s) 1112
BtsCI GGATG 3 cut(s) 6, 403, 2109
BtsI GCAGTG 4 cut(s) 346, 1393, 1842, 2034
BtsIMutI CAGTG 6 cut(s) 346, 1117, 1393, 1603, 1842, 2034
BveI ACCTGC 1 cut(s) 523
CaiI CAGNNNCTG 1 cut(s) 1457
CfoI GCGC 2 cut(s) 268, 858
Cfr10I RCCGGY 2 cut(s) 268, 702
Cfr13I GGNCC 3 cut(s) 1007, 1632, 1950
Csp6I GTAC 3 cut(s) 182, 512, 1860
CspCI CAANNNNNGTGG 2 cut(s) 1681, 1716
CviQI GTAC 3 cut(s) 182, 512, 1860
DdeI CTNAG 6 cut(s) 1089, 1259, 1350, 1403, 1628, 1637
DinI GGCGCC 1 cut(s) 267
DpnI GATC 2 cut(s) 545, 628
DpnII GATC 2 cut(s) 543, 626
DraI TTTAAA 2 cut(s) 198, 735
DraIII CACNNNGTG 1 cut(s) 480
DrdI GACNNNNNNGTC 1 cut(s) 1222
DseDI GACNNNNNNGTC 1 cut(s) 1222
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 495, 1335
EarI CTCTTC 2 cut(s) 495, 1335
Eco130I CCWWGG 4 cut(s) 345, 783, 1010, 1652
Eco47I GGWCC 1 cut(s) 1950
Eco57I CTGAAG 1 cut(s) 438
Eco72I CACGTG 1 cut(s) 823
Eco81I CCTNAGG 1 cut(s) 1089
EcoNI CCTNNNNNAGG 1 cut(s) 968
EcoO109I RGGNCCY 1 cut(s) 1632
EcoRI GAATTC 2 cut(s) 332, 809
EcoRII CCWGG 2 cut(s) 880, 1731
EcoT14I CCWWGG 4 cut(s) 345, 783, 1010, 1652
EcoT22I ATGCAT 2 cut(s) 613, 1209
EgeI GGCGCC 1 cut(s) 267
EheI GGCGCC 1 cut(s) 267
ErhI CCWWGG 4 cut(s) 345, 783, 1010, 1652
FalI AAGNNNNNCTT 4 cut(s) 178, 210, 936, 968
FauI CCCGC 2 cut(s) 457, 1367
FauNDI CATATG 1 cut(s) 940
Fnu4HI GCNGC 8 cut(s) 20, 412, 999, 1245, 1710, 1713, 1758, 2128
FokI GGATG 2 cut(s) 410, 2116
Fsp4HI GCNGC 8 cut(s) 20, 412, 999, 1245, 1710, 1713, 1758, 2128
FspBI CTAG 5 cut(s) 641, 837, 1392, 1508, 1797
GlaI GCGC 2 cut(s) 267, 857
GluI GCNGC 8 cut(s) 20, 412, 999, 1245, 1710, 1713, 1758, 2128
GsuI CTGGAG 2 cut(s) 948, 1100
HaeII RGCGCY 1 cut(s) 269
HaeIII GGCC 4 cut(s) 5, 880, 1009, 1633
HapII CCGG 2 cut(s) 269, 703
HhaI GCGC 2 cut(s) 268, 858
Hin1I GRCGYC 2 cut(s) 177, 266
Hin6I GCGC 2 cut(s) 266, 856
HinP1I GCGC 2 cut(s) 266, 856
HincII GTYRAC 1 cut(s) 1689
HindII GTYRAC 1 cut(s) 1689
HinfI GANTC 7 cut(s) 467, 1049, 1287, 1354, 1424, 1593, 2153
HpaII CCGG 2 cut(s) 269, 703
HphI GGTGA 3 cut(s) 34, 49, 1260
Hpy166II GTNNAC 3 cut(s) 1689, 1842, 1906
Hpy188I TCNGA 5 cut(s) 114, 562, 1066, 1423, 1852
Hpy188III TCNNGA 8 cut(s) 29, 927, 1055, 1079, 1088, 1337, 1487, 1530
Hpy8I GTNNAC 3 cut(s) 1689, 1842, 1906
Hpy99I CGWCG 2 cut(s) 179, 182
HpyAV CCTTC 3 cut(s) 244, 1357, 1960
HpyCH4III ACNGT 6 cut(s) 1157, 1224, 1483, 1499, 1686, 1903
HpyCH4IV ACGT 7 cut(s) 14, 117, 177, 822, 1111, 1438, 1446
HpyF10VI GCNNNNNNNGC 8 cut(s) 369, 797, 886, 1757, 1903, 1988, 1997, 2006
HpyF3I CTNAG 6 cut(s) 1089, 1259, 1350, 1403, 1628, 1637
HpySE526I ACGT 7 cut(s) 14, 117, 177, 822, 1111, 1438, 1446
Hsp92I GRCGYC 2 cut(s) 177, 266
HspAI GCGC 2 cut(s) 266, 856
KasI GGCGCC 1 cut(s) 265
Kzo9I GATC 2 cut(s) 543, 626
LguI GCTCTTC 1 cut(s) 1335
LmnI GCTCC 4 cut(s) 27, 711, 793, 979
Lsp1109I GCAGC 7 cut(s) 31, 985, 1256, 1696, 1699, 1769, 2139
LweI GCATC 8 cut(s) 420, 435, 598, 937, 1140, 1194, 1856, 2099
MaeI CTAG 5 cut(s) 641, 837, 1392, 1508, 1797
MaeII ACGT 7 cut(s) 14, 117, 177, 822, 1111, 1438, 1446
MaeIII GTNAC 7 cut(s) 311, 1093, 1112, 1314, 1447, 1623, 1723
MalI GATC 2 cut(s) 545, 628
MboI GATC 2 cut(s) 543, 626
MboII GAAGA 9 cut(s) 46, 476, 512, 617, 956, 1352, 1505, 1550, 1673
MflI RGATCY 1 cut(s) 543
MhlI GDGCHC 4 cut(s) 1021, 1380, 1844, 1908
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 266
MlyI GAGTC 3 cut(s) 1058, 1363, 1433
MmeI TCCRAC 4 cut(s) 580, 585, 1502, 1528
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 2 cut(s) 613, 1209
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 1 cut(s) 616
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 2 cut(s) 458, 998
MspI CCGG 2 cut(s) 269, 703
MspR9I CCNGG 2 cut(s) 882, 1733
Mva1269I GAATGC 1 cut(s) 1899
MvaI CCWGG 2 cut(s) 882, 1733
MwoI GCNNNNNNNGC 8 cut(s) 369, 797, 886, 1757, 1903, 1988, 1997, 2006
NarI GGCGCC 1 cut(s) 266
NcoI CCATGG 1 cut(s) 1010
NdeI CATATG 1 cut(s) 940
NdeII GATC 2 cut(s) 543, 626
NheI GCTAGC 1 cut(s) 836
NlaIV GGNNCC 7 cut(s) 267, 636, 707, 1018, 1379, 1634, 2034
NmuCI GTSAC 2 cut(s) 1112, 1723
NsiI ATGCAT 2 cut(s) 613, 1209
NspI RCATGY 4 cut(s) 776, 1211, 1420, 1982
NspV TTCGAA 1 cut(s) 1964
PaeI GCATGC 2 cut(s) 1211, 1982
PciI ACATGT 1 cut(s) 1416
PciSI GCTCTTC 1 cut(s) 1335
PctI GAATGC 1 cut(s) 1899
PfeI GAWTC 4 cut(s) 467, 1287, 1593, 2153
PkrI GCNGC 8 cut(s) 21, 413, 1000, 1246, 1711, 1714, 1759, 2129
PleI GAGTC 3 cut(s) 1057, 1362, 1432
PluTI GGCGCC 1 cut(s) 269
PmaCI CACGTG 1 cut(s) 823
PmlI CACGTG 1 cut(s) 823
PpsI GAGTC 3 cut(s) 1057, 1362, 1432
Ppu21I YACGTR 1 cut(s) 823
PscI ACATGT 1 cut(s) 1416
PshBI ATTAAT 2 cut(s) 1521, 1937
PsiI TTATAA 2 cut(s) 935, 2051
Psp1406I AACGTT 1 cut(s) 117
Psp6I CCWGG 2 cut(s) 880, 1731
PspCI CACGTG 1 cut(s) 823
PspGI CCWGG 2 cut(s) 880, 1731
PspN4I GGNNCC 7 cut(s) 267, 636, 707, 1018, 1379, 1634, 2034
PspPI GGNCC 3 cut(s) 1007, 1632, 1950
PstI CTGCAG 2 cut(s) 341, 357
PstNI CAGNNNCTG 1 cut(s) 1457
PsuI RGATCY 1 cut(s) 543
PvuII CAGCTG 1 cut(s) 998
RsaI GTAC 3 cut(s) 183, 513, 1861
RsaNI GTAC 3 cut(s) 182, 512, 1860
RseI CAYNNNNRTG 1 cut(s) 616
SapI GCTCTTC 1 cut(s) 1335
SatI GCNGC 8 cut(s) 20, 412, 999, 1245, 1710, 1713, 1758, 2128
Sau3AI GATC 2 cut(s) 543, 626
Sau96I GGNCC 3 cut(s) 1007, 1632, 1950
SchI GAGTC 3 cut(s) 1058, 1363, 1433
ScrFI CCNGG 2 cut(s) 882, 1733
SduI GDGCHC 4 cut(s) 1021, 1380, 1844, 1908
SfaNI GCATC 8 cut(s) 420, 435, 598, 937, 1140, 1194, 1856, 2099
SfcI CTRYAG 5 cut(s) 337, 353, 528, 693, 1038
SfoI GGCGCC 1 cut(s) 267
SfuI TTCGAA 1 cut(s) 1964
SinI GGWCC 1 cut(s) 1950
SmiMI CAYNNNNRTG 1 cut(s) 616
SpeI ACTAGT 1 cut(s) 640
SphI GCATGC 2 cut(s) 1211, 1982
SsiI CCGC 8 cut(s) 45, 395, 412, 450, 458, 791, 1374, 2009
SspDI GGCGCC 1 cut(s) 265
SspI AATATT 3 cut(s) 283, 2019, 2064
SspMI CTAG 5 cut(s) 641, 837, 1392, 1508, 1797
StyD4I CCNGG 2 cut(s) 880, 1731
StyI CCWWGG 4 cut(s) 345, 783, 1010, 1652
TaaI ACNGT 6 cut(s) 1157, 1224, 1483, 1499, 1686, 1903
TaiI ACGT 7 cut(s) 17, 120, 180, 825, 1114, 1441, 1449
TaqI TCGA 5 cut(s) 381, 423, 1964, 2093, 2184
TatI WGTACW 1 cut(s) 1859
TauI GCSGC 1 cut(s) 414
TfiI GAWTC 4 cut(s) 467, 1287, 1593, 2153
TscAI CASTG 6 cut(s) 346, 1124, 1393, 1603, 1849, 2034
TseFI GTSAC 2 cut(s) 1112, 1723
TseI GCWGC 7 cut(s) 19, 998, 1244, 1709, 1712, 1757, 2127
Tsp45I GTSAC 2 cut(s) 1112, 1723
TspGWI ACGGA 1 cut(s) 491
TspRI CASTG 6 cut(s) 346, 1124, 1393, 1603, 1849, 2034
VneI GTGCAC 2 cut(s) 1840, 1904
VpaK11BI GGWCC 1 cut(s) 1950
VspI ATTAAT 2 cut(s) 1521, 1937
XagI CCTNNNNNAGG 1 cut(s) 968
XapI RAATTY 7 cut(s) 233, 323, 332, 521, 728, 809, 1642
XceI RCATGY 4 cut(s) 776, 1211, 1420, 1982
XcmI CCANNNNNNNNNTGG 3 cut(s) 133, 1194, 1739
XspI CTAG 5 cut(s) 641, 837, 1392, 1508, 1797
ZraI GACGTC 1 cut(s) 178
Zsp2I ATGCAT 2 cut(s) 613, 1209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.