Rh3BG364700

Plant protein of unknown function (DUF639)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0012209
Physical Location & Seq
Reverse (-)
44865469 .. 44870309
4841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG364700.1

Sequence Viewer

Length: 2100 bp
ATGTCGACAATGAGAATGAAACATCTCTCCTCCGTTGCCAAGGATGTTGTACAATTCTGCGCTGTGAAACTGAACACATCGGTGGATAAGTTAACGGAGGAATTTGAAGCGACCAGCTCATGGAATAACGAAACGGCGTCGTCGCCCGGTGGCGGTGGTGGTGCTGTTGGCACTTACGCGAGGAAATTTCTAGAATTTTGCAGTGCAAAGGGTGTGAGTGAGTTATGCCAAAACAATATTGAGGAAAAGATTGCCGATGGAATCTTTAGTCGTTTCACATTCGACATGATGCTCGCCTGGGAGATTCCCGACTGTGCCCAAGAGGACTCTTTCACCGAGTGTGTGGCAAAGGAGAAAGAAGACAAAAAAGTAGTTGCAAAGTTTCATCCAGAACAAGACGATGTTTCTTTGTTCTATACAGACCTCATGCCACTTCTAGTTGATAATGAGCGGAACGTTGGAGAAGATGCATTTGTGTGGTTGGGATCACTTGTTCCATTAGTCACAGATGTTGTTAATGGAAGATTTACCTTTGAAATTTTAACAGCACATGCAGGATACCGGCTCCATTTTCCTGCGTATGACAAATACCTCAAGGAAATCGACAAATGTATAAAACATCTGCAAAAACAAGCAAAGCCAAAGGGTGTGGAGCTTGCAGATGATGAATTCATTTTACATGTGGAGGGAACTGCTAGCTCACAAAGAGTGGTACGCCACATCGGAGGAACAAGTTGGCCTGGTAAGCTCACCCTGACCAATTACGCACTCTATTTTGAGGCCTCTGGTGTGATAACATATGAAGATGCTCTTAAAATAGACCTTTCAAAGGATAAGGAGCAGAGTGTCAAACCAGCCTCTACAGGACCATGGGGTGCCCCACTTTTTGACAAGGCTATTGTTATCGAGTCTCCAGAGTTATCAGAGGGGATTGTGCTCGAATTCCCCGAGGTAACAAGCTCCACAAGGCGTGACCATTGGCTTGCACTAACAAAGGAGATCATGTTGATGCACCAGTTTCTATCAAAATTCAAATTAGAATGTCCAATACAAGCATGGGAGATGCATGCAAGGACAATACTATCAATAATAAGGCTCCATGCAGCAAGGGAAATGCTAAGAATATCTCCCCCTCAACCGACACGATTCTTAATCTTTTCCTTGTTTGAGGAGTTACCGAAGGGGGATTACATTCTAGAAGAGCTTGCTGAGAGTCTAAAGAAGGTCAATAGCGGACATCCATGTAGTGCAAGTTCAATCCTAAGGAGTATGATCATTTCTGAGTCAATTCACTCAAGTGTAGAGGTAACAGAAGTGGGAAAGGAAATTGCAGGTCCAAGTGGTCCAGTTGAAGACACATCCTTATTAGAAAGTGTAATTAATCAAGCAAGAGAGGAAGAGAAGGAAATTGCTATTGCCAAAGCGACCACAGAGGGACTGAAAGAAGAAGGCATCACTGAAAGCGCTACTATTTTTATGGAGCTACTAAAGCCCCTTAGAAATGAGTGGTCTTGGTTTGAAGAAGTCCTCACATGGGAAAGGCCGGCAACCACACTGATTGTGATTGGTGCGGCTCTAATTGTCACCTACAAGGAGTGGGTGGGCAAAGCCATAGCAGCTTTCTTGGTTTGGGTGGTTGCAAAGATGATTAGAGCAAGACAGGAAAGAATTGATGAAAAGTGCAATGAGCTAGTTGTGTACACTGCATCTGAACAGACTACAGTTGAAAACATAGTGTCAGCTCAACACGGGGTGCAAATTGTGCATGAGATAGTGAAGAAAGCAAATGTCTCGGTGTTGAAACTGTGGTCGATATTCATTTCAAAGGCCCACAAGCATGCAAATACAGCAATGCTGGCGCTAAGTGCAGCCTCTATATTTTTAGCAGTGGTTCCGATAAAGGTGTTTATAATGGGAGCCTTGTTGTATTACTTCACAATGACATTAGTATCAAAGTTAGGTAAGAGCGAGGGGAACAACCAAGGATTTACTAGACGACTGAAGGAATGGTGGGATTCAATTCCAGTTATTCCTGTGCATGTTGTTGATGAGGTTCCCAACAGTCCTAATCGAATGAAATGCGTACAGGCGGAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF639

Protein Analysis

699

Amino Acids

78.15

Weight (kDa)

5.5

Isoelectric Point (pI)

39.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF639 PF04842 455 - 684 1.2e-62 Plant protein of unknown function (DUF639)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G21720 AT2G21720
fragaria_vesca FvH4_1g28470 FvH4_1g28470 FvH4_1g28470
malus_domestica MD12G1008600.v1.1 MD14G1006000.v1.1
prunus_persica Prupe.7G010400_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0496361 RchiOBHm_Chr3g0496371
rosa_laevigata RLG00000022528
rosa_multiflora Rmu_sc0002461.1_g000006
rosa_roxburghii Rroxscaffold_6G00389250
rosa_rugosa Rorug03G0282000
rosa_samantha Rh3AG328600 Rh3BG364700 Rh3CG361700 Rh3DG364700
rosa_wichuraiana Rw3G028770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1910
Acc36I ACCTGC 1 cut(s) 1322
AccB1I GGYRCC 1 cut(s) 875
AccB7I CCANNNNNTGG 1 cut(s) 120
AccBSI CCGCTC 1 cut(s) 451
AccI GTMKAC 1 cut(s) 5
AccII CGCG 1 cut(s) 179
AciI CCGC 5 cut(s) 153, 451, 1233, 1571, 2090
AclI AACGTT 1 cut(s) 456
AclWI GGATC 1 cut(s) 493
AcsI RAATTY 7 cut(s) 101, 185, 194, 537, 668, 941, 1028
AcuI CTGAAG 1 cut(s) 2021
AcyI GRCGYC 1 cut(s) 137
AdeI CACNNNGTG 2 cut(s) 339, 1753
AfaI GTAC 4 cut(s) 51, 714, 1700, 2085
AfeI AGCGCT 1 cut(s) 1465
AfiI CCNNNNNNNGG 4 cut(s) 120, 152, 829, 1534
AflIII ACRYGT 1 cut(s) 679
AjnI CCWGG 2 cut(s) 296, 739
AleI CACNNNNGTG 2 cut(s) 80, 1296
AloI GAACNNNNNNTCC 2 cut(s) 477, 509
Alw21I GWGCWC 1 cut(s) 939
Alw26I GTCTC 2 cut(s) 915, 1795
AlwI GGATC 1 cut(s) 493
Ama87I CYCGRG 1 cut(s) 947
Aor51HI AGCGCT 1 cut(s) 1465
AoxI GGCC 4 cut(s) 737, 780, 1541, 1827
ApeKI GCWGC 3 cut(s) 1103, 1616, 1868
ApoI RAATTY 7 cut(s) 101, 185, 194, 537, 668, 941, 1028
AseI ATTAAT 1 cut(s) 1380
AspLEI GCGC 3 cut(s) 62, 1466, 1861
AspS9I GGNCC 4 cut(s) 866, 1334, 1343, 1828
AsuC2I CCSGG 1 cut(s) 147
AsuHPI GGTGA 3 cut(s) 325, 742, 1576
AsuNHI GCTAGC 1 cut(s) 695
AvaI CYCGRG 1 cut(s) 947
AvaII GGWCC 3 cut(s) 866, 1334, 1343
AxyI CCTNAGG 1 cut(s) 1262
BaeGI GKGCMC 2 cut(s) 319, 880
BaeI ACNNNNGTAYC 2 cut(s) 1932, 1965
BanI GGYRCC 1 cut(s) 875
BarI GAAGNNNNNNTAC 2 cut(s) 1172, 1204
BbsI GAAGAC 2 cut(s) 366, 1359
Bbv12I GWGCWC 1 cut(s) 939
BbvI GCAGC 3 cut(s) 1115, 1628, 1880
BccI CCATC 1 cut(s) 251
BceAI ACGGC 1 cut(s) 150
BcgI CGANNNNNNTGC 4 cut(s) 1773, 1807, 2061, 2095
BciT130I CCWGG 2 cut(s) 298, 741
BciVI GTATCC 1 cut(s) 551
BclI TGATCA 1 cut(s) 1272
BcnI CCSGG 1 cut(s) 147
BcoDI GTCTC 2 cut(s) 915, 1795
BfaI CTAG 7 cut(s) 191, 437, 696, 1196, 1691, 1992, 2098
BfmI CTRYAG 2 cut(s) 861, 1719
BfoI RGCGCY 2 cut(s) 1467, 1862
BfuAI ACCTGC 1 cut(s) 1322
BfuI GTATCC 1 cut(s) 551
BisI GCNGC 4 cut(s) 1104, 1572, 1617, 1869
BlsI GCNGC 4 cut(s) 1105, 1573, 1618, 1870
Bme1390I CCNGG 3 cut(s) 147, 298, 741
Bme18I GGWCC 3 cut(s) 866, 1334, 1343
BmeT110I CYCGRG 1 cut(s) 947
BmgT120I GGNCC 4 cut(s) 866, 1334, 1343, 1828
BmiI GGNNCC 6 cut(s) 566, 877, 1097, 1893, 1918, 2055
BmrFI CCNGG 3 cut(s) 147, 298, 741
BmsI GCATC 7 cut(s) 279, 457, 796, 999, 1053, 1461, 1715
BmtI GCTAGC 1 cut(s) 699
BpiI GAAGAC 2 cut(s) 366, 1359
BpmI CTGGAG 1 cut(s) 897
BpuEI CTTGAG 2 cut(s) 578, 1279
BpuMI CCSGG 1 cut(s) 147
BsaHI GRCGYC 1 cut(s) 137
BsaJI CCNNGG 5 cut(s) 39, 297, 869, 948, 1981
BsaXI ACNNNNNCTCC 2 cut(s) 989, 1019
Bsc4I CCNNNNNNNGG 4 cut(s) 120, 152, 829, 1534
Bse118I RCCGGY 2 cut(s) 561, 1543
Bse1I ACTGG 3 cut(s) 1015, 1346, 2024
Bse21I CCTNAGG 1 cut(s) 1262
Bse3DI GCAATG 2 cut(s) 1690, 1857
BseBI CCWGG 2 cut(s) 298, 741
BseDI CCNNGG 5 cut(s) 39, 297, 869, 948, 1981
BseGI GGATG 4 cut(s) 49, 385, 1237, 1358
BseLI CCNNNNNNNGG 4 cut(s) 120, 152, 829, 1534
BseMI GCAATG 2 cut(s) 1690, 1857
BseMII CTCAG 2 cut(s) 1200, 1272
BseNI ACTGG 3 cut(s) 1015, 1346, 2024
BseRI GAGGAG 2 cut(s) 19, 1184
BseSI GKGCMC 2 cut(s) 319, 880
BseXI GCAGC 3 cut(s) 1115, 1628, 1880
BsgI GTGCAG 1 cut(s) 1887
Bsh1236I CGCG 1 cut(s) 179
BshFI GGCC 4 cut(s) 739, 782, 1543, 1829
BshNI GGYRCC 1 cut(s) 875
BsiHKAI GWGCWC 1 cut(s) 939
BsiHKCI CYCGRG 1 cut(s) 947
BsiSI CCGG 3 cut(s) 147, 562, 1544
BslFI GGGAC 1 cut(s) 1449
BslI CCNNNNNNNGG 4 cut(s) 120, 152, 829, 1534
BsmAI GTCTC 2 cut(s) 915, 1795
BsmFI GGGAC 1 cut(s) 1449
BsnI GGCC 4 cut(s) 739, 782, 1543, 1829
BsoBI CYCGRG 1 cut(s) 947
Bsp1286I GDGCHC 3 cut(s) 319, 880, 939
Bsp1407I TGTACA 2 cut(s) 49, 1698
Bsp143I GATC 3 cut(s) 485, 999, 1272
Bsp19I CCATGG 1 cut(s) 869
BspACI CCGC 5 cut(s) 153, 451, 1233, 1571, 2090
BspANI GGCC 4 cut(s) 739, 782, 1543, 1829
BspCNI CTCAG 2 cut(s) 1201, 1273
BspFNI CGCG 1 cut(s) 179
BspLI GGNNCC 6 cut(s) 566, 877, 1097, 1893, 1918, 2055
BspMI ACCTGC 1 cut(s) 1322
BspOI GCTAGC 1 cut(s) 699
BspPI GGATC 1 cut(s) 493
BspQI GCTCTTC 1 cut(s) 1194
BspT107I GGYRCC 1 cut(s) 875
BsrBI CCGCTC 1 cut(s) 451
BsrDI GCAATG 2 cut(s) 1690, 1857
BsrFI RCCGGY 2 cut(s) 561, 1543
BsrGI TGTACA 2 cut(s) 49, 1698
BsrI ACTGG 3 cut(s) 1015, 1346, 2024
BssAI RCCGGY 2 cut(s) 561, 1543
BssECI CCNNGG 5 cut(s) 39, 297, 869, 948, 1981
BssMI GATC 3 cut(s) 485, 999, 1272
BssNI GRCGYC 1 cut(s) 137
BssT1I CCWWGG 3 cut(s) 39, 869, 1981
Bst2UI CCWGG 2 cut(s) 298, 741
Bst4CI ACNGT 4 cut(s) 314, 1723, 1806, 2063
Bst6I CTCTTC 2 cut(s) 1194, 1392
BstACI GRCGYC 1 cut(s) 137
BstAPI GCANNNNNTGC 1 cut(s) 1762
BstAUI TGTACA 2 cut(s) 49, 1698
BstC8I GCNNGC 9 cut(s) 294, 657, 697, 984, 1068, 1206, 1545, 1839, 1857
BstDEI CTNAG 6 cut(s) 1118, 1209, 1262, 1281, 1496, 1862
BstDSI CCRYGG 1 cut(s) 869
BstENI CCTNNNNNAGG 1 cut(s) 827
BstF5I GGATG 4 cut(s) 49, 385, 1237, 1358
BstFNI CGCG 1 cut(s) 179
BstH2I RGCGCY 2 cut(s) 1467, 1862
BstHHI GCGC 3 cut(s) 62, 1466, 1861
BstKTI GATC 3 cut(s) 488, 1002, 1275
BstMAI GTCTC 2 cut(s) 915, 1795
BstMBI GATC 3 cut(s) 485, 999, 1272
BstMWI GCNNNNNNNGC 7 cut(s) 745, 1489, 1616, 1762, 1847, 1856, 1865
BstNI CCWGG 2 cut(s) 298, 741
BstNSI RCATGY 5 cut(s) 554, 683, 1070, 1841, 2042
BstSCI CCNGG 3 cut(s) 145, 296, 739
BstSFI CTRYAG 2 cut(s) 861, 1719
BstSLI GKGCMC 2 cut(s) 319, 880
BstUI CGCG 1 cut(s) 179
BstV1I GCAGC 3 cut(s) 1115, 1628, 1880
BstV2I GAAGAC 2 cut(s) 366, 1359
Bsu36I CCTNAGG 1 cut(s) 1262
BsuI GTATCC 1 cut(s) 551
BsuRI GGCC 4 cut(s) 739, 782, 1543, 1829
BtgI CCRYGG 1 cut(s) 869
BtsCI GGATG 4 cut(s) 49, 385, 1237, 1358
BtsI GCAGTG 3 cut(s) 208, 1701, 1893
BtsIMutI CAGTG 5 cut(s) 208, 1455, 1553, 1701, 1893
BveI ACCTGC 1 cut(s) 1322
Cac8I GCNNGC 9 cut(s) 294, 657, 697, 984, 1068, 1206, 1545, 1839, 1857
CfoI GCGC 3 cut(s) 62, 1466, 1861
Cfr10I RCCGGY 2 cut(s) 561, 1543
Cfr13I GGNCC 4 cut(s) 866, 1334, 1343, 1828
CseI GACGC 1 cut(s) 126
Csp6I GTAC 4 cut(s) 50, 713, 1699, 2084
CspCI CAANNNNNGTGG 4 cut(s) 630, 665, 1540, 1575
CviQI GTAC 4 cut(s) 50, 713, 1699, 2084
DdeI CTNAG 6 cut(s) 1118, 1209, 1262, 1281, 1496, 1862
DpnI GATC 3 cut(s) 487, 1001, 1274
DpnII GATC 3 cut(s) 485, 999, 1272
DraIII CACNNNGTG 2 cut(s) 339, 1753
Eam1104I CTCTTC 2 cut(s) 1194, 1392
EarI CTCTTC 2 cut(s) 1194, 1392
Eco130I CCWWGG 3 cut(s) 39, 869, 1981
Eco147I AGGCCT 1 cut(s) 782
Eco47I GGWCC 3 cut(s) 866, 1334, 1343
Eco47III AGCGCT 1 cut(s) 1465
Eco57I CTGAAG 1 cut(s) 2021
Eco81I CCTNAGG 1 cut(s) 1262
Eco88I CYCGRG 1 cut(s) 947
EcoNI CCTNNNNNAGG 1 cut(s) 827
EcoRI GAATTC 2 cut(s) 668, 941
EcoRII CCWGG 2 cut(s) 296, 739
EcoT14I CCWWGG 3 cut(s) 39, 869, 1981
EcoT22I ATGCAT 2 cut(s) 472, 1068
ErhI CCWWGG 3 cut(s) 39, 869, 1981
FalI AAGNNNNNCTT 2 cut(s) 795, 827
FaqI GGGAC 1 cut(s) 1449
FauNDI CATATG 1 cut(s) 799
FbaI TGATCA 1 cut(s) 1272
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 4 cut(s) 1104, 1572, 1617, 1869
FokI GGATG 4 cut(s) 56, 372, 1224, 1345
Fsp4HI GCNGC 4 cut(s) 1104, 1572, 1617, 1869
FspBI CTAG 7 cut(s) 191, 437, 696, 1196, 1691, 1992, 2098
GlaI GCGC 3 cut(s) 61, 1465, 1860
GluI GCNGC 4 cut(s) 1104, 1572, 1617, 1869
GsuI CTGGAG 1 cut(s) 897
HaeII RGCGCY 2 cut(s) 1467, 1862
HaeIII GGCC 4 cut(s) 739, 782, 1543, 1829
HapII CCGG 3 cut(s) 147, 562, 1544
HgaI GACGC 1 cut(s) 126
HhaI GCGC 3 cut(s) 62, 1466, 1861
Hin1I GRCGYC 1 cut(s) 137
Hin6I GCGC 3 cut(s) 60, 1464, 1859
HinP1I GCGC 3 cut(s) 60, 1464, 1859
HincII GTYRAC 2 cut(s) 6, 93
HindII GTYRAC 2 cut(s) 6, 93
HinfI GANTC 8 cut(s) 261, 304, 326, 908, 1146, 1213, 1283, 2015
HpaI GTTAAC 1 cut(s) 93
HpaII CCGG 3 cut(s) 147, 562, 1544
HphI GGTGA 3 cut(s) 325, 742, 1576
Hpy166II GTNNAC 4 cut(s) 6, 93, 1699, 1701
Hpy188I TCNGA 5 cut(s) 725, 925, 1282, 1711, 1896
Hpy188III TCNNGA 5 cut(s) 191, 308, 389, 914, 1196
Hpy8I GTNNAC 4 cut(s) 6, 93, 1699, 1701
Hpy99I CGWCG 2 cut(s) 142, 145
HpyAV CCTTC 6 cut(s) 1174, 1216, 1396, 1442, 1996, 2087
HpyCH4III ACNGT 4 cut(s) 314, 1723, 1806, 2063
HpyCH4IV ACGT 1 cut(s) 456
HpyF10VI GCNNNNNNNGC 7 cut(s) 745, 1489, 1616, 1762, 1847, 1856, 1865
HpyF3I CTNAG 6 cut(s) 1118, 1209, 1262, 1281, 1496, 1862
HpySE526I ACGT 1 cut(s) 456
Hsp92I GRCGYC 1 cut(s) 137
HspAI GCGC 3 cut(s) 60, 1464, 1859
KroI GCCGGC 1 cut(s) 1543
KroNI GCCGGC 1 cut(s) 1545
Ksp22I TGATCA 1 cut(s) 1272
KspAI GTTAAC 1 cut(s) 93
Kzo9I GATC 3 cut(s) 485, 999, 1272
LguI GCTCTTC 1 cut(s) 1194
LmnI GCTCC 7 cut(s) 570, 652, 838, 965, 1101, 1480, 1916
Lsp1109I GCAGC 3 cut(s) 1115, 1628, 1880
LweI GCATC 7 cut(s) 279, 457, 796, 999, 1053, 1461, 1715
MaeI CTAG 7 cut(s) 191, 437, 696, 1196, 1691, 1992, 2098
MaeII ACGT 1 cut(s) 456
MaeIII GTNAC 6 cut(s) 502, 952, 971, 1173, 1306, 1582
MalI GATC 3 cut(s) 487, 1001, 1274
MbiI CCGCTC 1 cut(s) 451
MboI GATC 3 cut(s) 485, 999, 1272
MhlI GDGCHC 3 cut(s) 319, 880, 939
MlyI GAGTC 4 cut(s) 320, 917, 1222, 1292
MmeI TCCRAC 1 cut(s) 439
Mph1103I ATGCAT 2 cut(s) 472, 1068
MroNI GCCGGC 1 cut(s) 1543
MseI TTAA 6 cut(s) 92, 516, 542, 813, 1151, 1380
MslI CAYNNNNRTG 5 cut(s) 80, 475, 1007, 1296, 1836
MspI CCGG 3 cut(s) 147, 562, 1544
MspR9I CCNGG 3 cut(s) 147, 298, 741
MvaI CCWGG 2 cut(s) 298, 741
MvnI CGCG 1 cut(s) 179
MwoI GCNNNNNNNGC 7 cut(s) 745, 1489, 1616, 1762, 1847, 1856, 1865
NaeI GCCGGC 1 cut(s) 1545
NciI CCSGG 1 cut(s) 147
NcoI CCATGG 1 cut(s) 869
NdeI CATATG 1 cut(s) 799
NdeII GATC 3 cut(s) 485, 999, 1272
NgoMIV GCCGGC 1 cut(s) 1543
NheI GCTAGC 1 cut(s) 695
NlaIV GGNNCC 6 cut(s) 566, 877, 1097, 1893, 1918, 2055
NmuCI GTSAC 3 cut(s) 502, 971, 1582
NsiI ATGCAT 2 cut(s) 472, 1068
NspI RCATGY 5 cut(s) 554, 683, 1070, 1841, 2042
OliI CACNNNNGTG 2 cut(s) 80, 1296
PaeI GCATGC 2 cut(s) 1070, 1841
PceI AGGCCT 1 cut(s) 782
PciI ACATGT 1 cut(s) 679
PciSI GCTCTTC 1 cut(s) 1194
PcsI WCGNNNNNNNCGW 1 cut(s) 945
PdiI GCCGGC 1 cut(s) 1545
PfeI GAWTC 4 cut(s) 261, 304, 1146, 2015
PflMI CCANNNNNTGG 1 cut(s) 120
PkrI GCNGC 4 cut(s) 1105, 1573, 1618, 1870
PleI GAGTC 4 cut(s) 320, 916, 1221, 1291
PpsI GAGTC 4 cut(s) 320, 916, 1221, 1291
PscI ACATGT 1 cut(s) 679
PshBI ATTAAT 1 cut(s) 1380
PsiI TTATAA 1 cut(s) 1910
Psp1406I AACGTT 1 cut(s) 456
Psp6I CCWGG 2 cut(s) 296, 739
PspGI CCWGG 2 cut(s) 296, 739
PspN4I GGNNCC 6 cut(s) 566, 877, 1097, 1893, 1918, 2055
PspPI GGNCC 4 cut(s) 866, 1334, 1343, 1828
PsrI GAACNNNNNNTAC 2 cut(s) 1237, 1269
RsaI GTAC 4 cut(s) 51, 714, 1700, 2085
RsaNI GTAC 4 cut(s) 50, 713, 1699, 2084
RseI CAYNNNNRTG 5 cut(s) 80, 475, 1007, 1296, 1836
SalI GTCGAC 1 cut(s) 4
SapI GCTCTTC 1 cut(s) 1194
SaqAI TTAA 6 cut(s) 92, 516, 542, 813, 1151, 1380
SatI GCNGC 4 cut(s) 1104, 1572, 1617, 1869
Sau3AI GATC 3 cut(s) 485, 999, 1272
Sau96I GGNCC 4 cut(s) 866, 1334, 1343, 1828
SchI GAGTC 4 cut(s) 320, 917, 1222, 1292
ScrFI CCNGG 3 cut(s) 147, 298, 741
SduI GDGCHC 3 cut(s) 319, 880, 939
SfaNI GCATC 7 cut(s) 279, 457, 796, 999, 1053, 1461, 1715
SfcI CTRYAG 2 cut(s) 861, 1719
SinI GGWCC 3 cut(s) 866, 1334, 1343
SmiMI CAYNNNNRTG 5 cut(s) 80, 475, 1007, 1296, 1836
SmlI CTYRAG 2 cut(s) 593, 1294
SmoI CTYRAG 2 cut(s) 593, 1294
SphI GCATGC 2 cut(s) 1070, 1841
SseBI AGGCCT 1 cut(s) 782
SsiI CCGC 5 cut(s) 153, 451, 1233, 1571, 2090
SspI AATATT 1 cut(s) 238
SspMI CTAG 7 cut(s) 191, 437, 696, 1196, 1691, 1992, 2098
StuI AGGCCT 1 cut(s) 782
StyD4I CCNGG 3 cut(s) 145, 296, 739
StyI CCWWGG 3 cut(s) 39, 869, 1981
TaaI ACNGT 4 cut(s) 314, 1723, 1806, 2063
TaiI ACGT 1 cut(s) 459
TaqI TCGA 7 cut(s) 5, 282, 603, 906, 939, 1811, 2071
TatI WGTACW 2 cut(s) 49, 1698
TauI GCSGC 1 cut(s) 1574
TfiI GAWTC 4 cut(s) 261, 304, 1146, 2015
Tru1I TTAA 6 cut(s) 92, 516, 542, 813, 1151, 1380
Tru9I TTAA 6 cut(s) 92, 516, 542, 813, 1151, 1380
TscAI CASTG 5 cut(s) 208, 1462, 1560, 1708, 1893
TseFI GTSAC 3 cut(s) 502, 971, 1582
TseI GCWGC 3 cut(s) 1103, 1616, 1868
Tsp45I GTSAC 3 cut(s) 502, 971, 1582
TspDTI ATGAA 8 cut(s) 32, 374, 661, 681, 816, 1689, 1807, 2090
TspGWI ACGGA 2 cut(s) 22, 110
TspRI CASTG 5 cut(s) 208, 1462, 1560, 1708, 1893
Van91I CCANNNNNTGG 1 cut(s) 120
VpaK11BI GGWCC 3 cut(s) 866, 1334, 1343
VspI ATTAAT 1 cut(s) 1380
XagI CCTNNNNNAGG 1 cut(s) 827
XapI RAATTY 7 cut(s) 101, 185, 194, 537, 668, 941, 1028
XbaI TCTAGA 2 cut(s) 190, 1195
XceI RCATGY 5 cut(s) 554, 683, 1070, 1841, 2042
XcmI CCANNNNNNNNNTGG 1 cut(s) 1053
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 7 cut(s) 191, 437, 696, 1196, 1691, 1992, 2098
Zsp2I ATGCAT 2 cut(s) 472, 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.