Prupe.7G053000_v2.0.a1

Vacuolar fusion protein CCZ1 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
9128397 .. 9133170
4774 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G053000.3

Sequence Viewer

Length: 1590 bp
ATGGGTTTGTCGTCTGCTAGTACCACGGCCAGTGCAACCCCAGAAGGACTGCAATTGTGCATATTTGATTTGAGGAGGGGTCAAAATGAAGGGCAAGAATTGGACAAGATATTGTTTTTCTTCCCTGCCGATTTGCCCTTCTCAGCACAATTCTCTGTGATTGGGCTCAGTGAAGGACTTATCACATTTACCAGAATCTTCTCTCCAGAGGCTGCTTGTGAAGCCATTGAAGCAGAGAGGCATTCGCATGTTTTTTATGAGGCGGAACCAGATATCTGGATGGTGATGGTAGTGGAGAAAAGCAAGGAGTTTGAAGCTATTTGGAGAAGTGATGCATTGAGAAAGGTTCTTAAGGAAGTCCATTATCTTTTTGTGATGTTTCATGGATCTATAAGAGCGTTGCTTGACAAAGACCCTGGTGGAGGACTAACTCGATCTCATTTGTACTATTTCATCATGGACTATCTTGGTGCATTTCAAAAGCGGTCTCCATTCGATGGGTGCTGCTGGGATTTTCTGGTCGGGAAGAAACTACTGTTACCATCATTCCGTGACTGTTTAAAGGAGCGTGGAACCGTACAGATGCTTACTGTAGGGCGGGAAGCAGCAATTGAAGTACAGTCGCTTGTAAGGGTGCTCGAATCTTGTGCTGGGAACATACCCTGTCACTCACTGATCTTGTTTCAGGACCTGTTGGTGTCCACAACACTTTCTCCTGATGACACCGTAAACCTATTTGCATATGCTGTTTTAAGGCTGACTCCCCGTGCTTTATCCTCTGGAGTAAGTTCCTGGTCCTATTTACGCAAAGGAGCTACATCCCATGTATCCTCAAGTTCTATCTTGGCCCGTCCTGGTGGTGTTCCAGAACAATTTCAAGGCTCAGATGTCAACTCTCCTGCTGGAGATAACAATTATCGTGTCATACGGCCCTTGCAGCAGGATAAGTGGTCCAAAGGGAAGGATGGTTTTCTTGTCACTGATATTTGGGGTGCAGAGGCTAGTAACTTGATTTCTGCCACTCCAACAGTTTTGCTCCATCAGACAGAGGAGAGAATGTATCTGTGTGCCCATCAGCATAAGAGCCTTACCTTAATTTTTCTCATTCCTGTTTCTTCAGTGCTAATTGGGGATCAAGGTGTTTCTGCGGTGAAGCAGCAAGTTCTTGAAAATGTATCCCTAAAGCTGTTGAGAGTTGAAGAGAAACTATCAAAAGGATGGGTTGGTGAGAATGCATATCATGTTAGTGGATATCGATATTTACTAGTGGACGGAGACAGAAATGTATCTAGGGCTTCTCCACCAGGAAAGGTCACAACCCTTACTAAGGATTCCTTACTTGCCTTAAGTAAGCTTAGAGAAGAAGTTGATTTGGAAAAGAGTAAAGCACAATCAAATAATGCTGGTCAAGAGAAAGAATTGGAAGTTAGCATCCGGGCGAAAAACAATGCTTGGGTTATTGCTCGGGTTACAAGAGGGAAGGAACTTTATATGGTTCTGGAGAAAGCCAATGAAACCCTTCTTTATGCCTCTGATGCTGTTGAAAAGTTCAGCAACAGGTACTGCAATGGAGCTTTCTCGTTGAATTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

530

Amino Acids

58.78

Weight (kDa)

6.45

Isoelectric Point (pI)

41.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 497
AciI CCGC 4 cut(s) 263, 484, 598, 1148
AclWI GGATC 2 cut(s) 394, 1140
AcoI YGGCCR 1 cut(s) 27
AcuI CTGAAG 1 cut(s) 1101
AfaI GTAC 5 cut(s) 22, 446, 579, 618, 1562
AfiI CCNNNNNNNGG 3 cut(s) 422, 497, 1327
AflII CTTAAG 2 cut(s) 350, 1345
AgsI TTSAA 9 cut(s) 230, 314, 479, 614, 878, 1169, 1199, 1544, 1585
AhlI ACTAGT 1 cut(s) 1264
AjnI CCWGG 4 cut(s) 415, 791, 853, 1303
AluBI AGCT 5 cut(s) 317, 815, 1186, 1354, 1574
AluI AGCT 5 cut(s) 317, 815, 1186, 1354, 1574
Alw21I GWGCWC 1 cut(s) 639
Alw26I GTCTC 2 cut(s) 492, 1269
AlwI GGATC 2 cut(s) 394, 1140
AlwNI CAGNNNCTG 3 cut(s) 212, 691, 1563
Ama87I CYCGRG 1 cut(s) 1464
AoxI GGCC 3 cut(s) 27, 846, 929
ApeKI GCWGC 5 cut(s) 212, 504, 605, 937, 1156
Asp700I GAANNNNTTC 2 cut(s) 873, 1518
AspS9I GGNCC 5 cut(s) 688, 795, 847, 930, 951
AsuC2I CCSGG 1 cut(s) 1436
AsuHPI GGTGA 3 cut(s) 295, 1162, 1238
AvaI CYCGRG 1 cut(s) 1464
AvaII GGWCC 3 cut(s) 688, 795, 951
BaeGI GKGCMC 1 cut(s) 1072
BanII GRGCYC 1 cut(s) 168
Bbv12I GWGCWC 1 cut(s) 639
BbvI GCAGC 5 cut(s) 199, 491, 617, 949, 1168
BccI CCATC 8 cut(s) 274, 280, 491, 550, 959, 1047, 1080, 1212
BceAI ACGGC 2 cut(s) 42, 944
BcgI CGANNNNNNTGC 2 cut(s) 629, 663
BciT130I CCWGG 4 cut(s) 417, 793, 855, 1305
BciVI GTATCC 2 cut(s) 838, 1186
BcnI CCSGG 1 cut(s) 1436
BcoDI GTCTC 2 cut(s) 492, 1269
BcuI ACTAGT 1 cut(s) 1264
BfaI CTAG 4 cut(s) 18, 1002, 1265, 1290
BfmI CTRYAG 1 cut(s) 591
BfrI CTTAAG 2 cut(s) 350, 1345
BfuI GTATCC 2 cut(s) 838, 1186
BisI GCNGC 5 cut(s) 213, 505, 606, 938, 1157
BlsI GCNGC 5 cut(s) 214, 506, 607, 939, 1158
Bme1390I CCNGG 5 cut(s) 417, 793, 855, 1305, 1436
Bme18I GGWCC 3 cut(s) 688, 795, 951
BmeT110I CYCGRG 1 cut(s) 1464
BmgT120I GGNCC 5 cut(s) 688, 795, 847, 930, 951
BmiI GGNNCC 2 cut(s) 267, 574
BmrFI CCNGG 5 cut(s) 417, 793, 855, 1305, 1436
BmsI GCATC 4 cut(s) 322, 573, 1440, 1525
BpmI CTGGAG 4 cut(s) 189, 801, 924, 1520
BpuEI CTTGAG 1 cut(s) 817
BpuMI CCSGG 1 cut(s) 1436
Bsa29I ATCGAT 1 cut(s) 1255
BsaI GGTCTC 1 cut(s) 492
BsaJI CCNNGG 2 cut(s) 24, 415
BsaXI ACNNNNNCTCC 4 cut(s) 697, 727, 1043, 1073
Bsc4I CCNNNNNNNGG 3 cut(s) 422, 497, 1327
Bse1I ACTGG 1 cut(s) 30
Bse3DI GCAATG 1 cut(s) 1573
BseBI CCWGG 4 cut(s) 417, 793, 855, 1305
BseCI ATCGAT 1 cut(s) 1255
BseDI CCNNGG 2 cut(s) 24, 415
BseGI GGATG 5 cut(s) 285, 818, 970, 1223, 1431
BseLI CCNNNNNNNGG 3 cut(s) 422, 497, 1327
BseMI GCAATG 1 cut(s) 1573
BseMII CTCAG 3 cut(s) 156, 181, 897
BseNI ACTGG 1 cut(s) 30
BseRI GAGGAG 2 cut(s) 88, 1064
BseSI GKGCMC 1 cut(s) 1072
BseXI GCAGC 5 cut(s) 199, 491, 617, 949, 1168
BseYI CCCAGC 2 cut(s) 507, 650
BsgI GTGCAG 1 cut(s) 1014
BshFI GGCC 3 cut(s) 29, 848, 931
BshVI ATCGAT 1 cut(s) 1255
BsiHKAI GWGCWC 1 cut(s) 639
BsiHKCI CYCGRG 1 cut(s) 1464
BsiSI CCGG 1 cut(s) 1435
BslI CCNNNNNNNGG 3 cut(s) 422, 497, 1327
BsmAI GTCTC 2 cut(s) 492, 1269
BsmI GAATGC 2 cut(s) 241, 1237
BsnI GGCC 3 cut(s) 29, 848, 931
Bso31I GGTCTC 1 cut(s) 492
BsoBI CYCGRG 1 cut(s) 1464
Bsp1286I GDGCHC 3 cut(s) 168, 639, 1072
Bsp143I GATC 4 cut(s) 386, 434, 675, 1132
BspACI CCGC 4 cut(s) 263, 484, 598, 1148
BspANI GGCC 3 cut(s) 29, 848, 931
BspCNI CTCAG 3 cut(s) 155, 180, 896
BspDI ATCGAT 1 cut(s) 1255
BspLI GGNNCC 2 cut(s) 267, 574
BspPI GGATC 2 cut(s) 394, 1140
BspTI CTTAAG 2 cut(s) 350, 1345
BspTNI GGTCTC 1 cut(s) 492
BsrDI GCAATG 1 cut(s) 1573
BsrI ACTGG 1 cut(s) 30
BssECI CCNNGG 2 cut(s) 24, 415
BssMI GATC 4 cut(s) 386, 434, 675, 1132
Bst2UI CCWGG 4 cut(s) 417, 793, 855, 1305
Bst4CI ACNGT 7 cut(s) 537, 557, 577, 592, 621, 727, 1030
Bst6I CTCTTC 1 cut(s) 1194
BstAFI CTTAAG 2 cut(s) 350, 1345
BstDEI CTNAG 5 cut(s) 142, 167, 883, 1326, 1355
BstDSI CCRYGG 1 cut(s) 24
BstENI CCTNNNNNAGG 2 cut(s) 420, 1325
BstF5I GGATG 5 cut(s) 285, 818, 970, 1223, 1431
BstKTI GATC 4 cut(s) 389, 437, 678, 1135
BstMAI GTCTC 2 cut(s) 492, 1269
BstMBI GATC 4 cut(s) 386, 434, 675, 1132
BstMWI GCNNNNNNNGC 4 cut(s) 221, 230, 937, 1535
BstNI CCWGG 4 cut(s) 417, 793, 855, 1305
BstNSI RCATGY 1 cut(s) 251
BstSCI CCNGG 5 cut(s) 415, 791, 853, 1303, 1434
BstSFI CTRYAG 1 cut(s) 591
BstSLI GKGCMC 1 cut(s) 1072
BstV1I GCAGC 5 cut(s) 199, 491, 617, 949, 1168
BstX2I RGATCY 1 cut(s) 386
BstXI CCANNNNNNTGG 1 cut(s) 276
BstYI RGATCY 1 cut(s) 386
Bsu15I ATCGAT 1 cut(s) 1255
BsuI GTATCC 2 cut(s) 838, 1186
BsuRI GGCC 3 cut(s) 29, 848, 931
BsuTUI ATCGAT 1 cut(s) 1255
BtgI CCRYGG 1 cut(s) 24
BtsCI GGATG 5 cut(s) 285, 818, 970, 1223, 1431
BtsIMutI CAGTG 5 cut(s) 37, 175, 671, 978, 1125
CaiI CAGNNNCTG 3 cut(s) 212, 691, 1563
Cfr13I GGNCC 5 cut(s) 688, 795, 847, 930, 951
ClaI ATCGAT 1 cut(s) 1255
Csp6I GTAC 5 cut(s) 21, 445, 578, 617, 1561
CviAII CATG 5 cut(s) 248, 383, 457, 824, 1241
CviQI GTAC 5 cut(s) 21, 445, 578, 617, 1561
DdeI CTNAG 5 cut(s) 142, 167, 883, 1326, 1355
DpnI GATC 4 cut(s) 388, 436, 677, 1134
DpnII GATC 4 cut(s) 386, 434, 675, 1132
DraI TTTAAA 1 cut(s) 561
EaeI YGGCCR 1 cut(s) 27
Eam1104I CTCTTC 1 cut(s) 1194
EarI CTCTTC 1 cut(s) 1194
EciI GGCGGA 1 cut(s) 278
Eco24I GRGCYC 1 cut(s) 168
Eco31I GGTCTC 1 cut(s) 492
Eco32I GATATC 2 cut(s) 274, 1253
Eco47I GGWCC 3 cut(s) 688, 795, 951
Eco57I CTGAAG 1 cut(s) 1101
Eco88I CYCGRG 1 cut(s) 1464
EcoNI CCTNNNNNAGG 2 cut(s) 420, 1325
EcoO109I RGGNCCY 1 cut(s) 688
EcoRII CCWGG 4 cut(s) 415, 791, 853, 1303
EcoRV GATATC 2 cut(s) 274, 1253
EcoT22I ATGCAT 2 cut(s) 337, 1237
EcoT38I GRGCYC 1 cut(s) 168
FaeI CATG 5 cut(s) 251, 386, 460, 827, 1244
FalI AAGNNNNNCTT 2 cut(s) 1319, 1351
FatI CATG 5 cut(s) 247, 382, 456, 823, 1240
FauI CCCGC 1 cut(s) 591
FauNDI CATATG 1 cut(s) 742
Fnu4HI GCNGC 5 cut(s) 213, 505, 606, 938, 1157
FokI GGATG 5 cut(s) 292, 805, 977, 1230, 1418
FriOI GRGCYC 1 cut(s) 168
Fsp4HI GCNGC 5 cut(s) 213, 505, 606, 938, 1157
FspBI CTAG 4 cut(s) 18, 1002, 1265, 1290
GluI GCNGC 5 cut(s) 213, 505, 606, 938, 1157
GsaI CCCAGC 2 cut(s) 511, 654
GsuI CTGGAG 4 cut(s) 189, 801, 924, 1520
HaeIII GGCC 3 cut(s) 29, 848, 931
HapII CCGG 1 cut(s) 1435
Hin1II CATG 5 cut(s) 251, 386, 460, 827, 1244
HincII GTYRAC 1 cut(s) 892
HindII GTYRAC 1 cut(s) 892
HindIII AAGCTT 1 cut(s) 1352
HinfI GANTC 4 cut(s) 195, 641, 760, 1331
HpaII CCGG 1 cut(s) 1435
HphI GGTGA 3 cut(s) 295, 1162, 1238
Hpy166II GTNNAC 4 cut(s) 702, 730, 892, 1270
Hpy188I TCNGA 3 cut(s) 886, 1044, 1534
Hpy8I GTNNAC 4 cut(s) 702, 730, 892, 1270
HpyAV CCTTC 7 cut(s) 38, 83, 148, 167, 955, 1474, 1529
HpyCH4III ACNGT 7 cut(s) 537, 557, 577, 592, 621, 727, 1030
HpyF10VI GCNNNNNNNGC 4 cut(s) 221, 230, 937, 1535
HpyF3I CTNAG 5 cut(s) 142, 167, 883, 1326, 1355
Hsp92II CATG 5 cut(s) 251, 386, 460, 827, 1244
Kzo9I GATC 4 cut(s) 386, 434, 675, 1132
LmnI GCTCC 4 cut(s) 565, 812, 1041, 1571
Lsp1109I GCAGC 5 cut(s) 199, 491, 617, 949, 1168
LweI GCATC 4 cut(s) 322, 573, 1440, 1525
MaeI CTAG 4 cut(s) 18, 1002, 1265, 1290
MaeIII GTNAC 7 cut(s) 537, 551, 665, 976, 1004, 1312, 1468
MalI GATC 4 cut(s) 388, 436, 677, 1134
MboI GATC 4 cut(s) 386, 434, 675, 1132
MboII GAAGA 6 cut(s) 112, 190, 538, 1107, 1211, 1373
MfeI CAATTG 2 cut(s) 53, 609
MflI RGATCY 1 cut(s) 386
MhlI GDGCHC 3 cut(s) 168, 639, 1072
MlyI GAGTC 1 cut(s) 754
MmeI TCCRAC 1 cut(s) 1049
Mph1103I ATGCAT 2 cut(s) 337, 1237
MroXI GAANNNNTTC 2 cut(s) 873, 1518
MseI TTAA 5 cut(s) 351, 560, 752, 1094, 1346
MslI CAYNNNNRTG 2 cut(s) 246, 1245
MspCI CTTAAG 2 cut(s) 350, 1345
MspI CCGG 1 cut(s) 1435
MspR9I CCNGG 5 cut(s) 417, 793, 855, 1305, 1436
MunI CAATTG 2 cut(s) 53, 609
Mva1269I GAATGC 2 cut(s) 241, 1237
MvaI CCWGG 4 cut(s) 417, 793, 855, 1305
MwoI GCNNNNNNNGC 4 cut(s) 221, 230, 937, 1535
NciI CCSGG 1 cut(s) 1436
NdeI CATATG 1 cut(s) 742
NdeII GATC 4 cut(s) 386, 434, 675, 1132
NlaIII CATG 5 cut(s) 251, 386, 460, 827, 1244
NlaIV GGNNCC 2 cut(s) 267, 574
NmuCI GTSAC 4 cut(s) 551, 665, 976, 1312
NsiI ATGCAT 2 cut(s) 337, 1237
NspI RCATGY 1 cut(s) 251
PctI GAATGC 2 cut(s) 241, 1237
PdmI GAANNNNTTC 2 cut(s) 873, 1518
PfeI GAWTC 3 cut(s) 195, 641, 1331
PflMI CCANNNNNTGG 1 cut(s) 497
PkrI GCNGC 5 cut(s) 214, 506, 607, 939, 1158
PleI GAGTC 1 cut(s) 754
PpsI GAGTC 1 cut(s) 754
PpuMI RGGWCCY 1 cut(s) 688
Psp5II RGGWCCY 1 cut(s) 688
Psp6I CCWGG 4 cut(s) 415, 791, 853, 1303
PspFI CCCAGC 2 cut(s) 507, 650
PspGI CCWGG 4 cut(s) 415, 791, 853, 1303
PspN4I GGNNCC 2 cut(s) 267, 574
PspPI GGNCC 5 cut(s) 688, 795, 847, 930, 951
PspPPI RGGWCCY 1 cut(s) 688
PstNI CAGNNNCTG 3 cut(s) 212, 691, 1563
PsuI RGATCY 1 cut(s) 386
RsaI GTAC 5 cut(s) 22, 446, 579, 618, 1562
RsaNI GTAC 5 cut(s) 21, 445, 578, 617, 1561
RseI CAYNNNNRTG 2 cut(s) 246, 1245
SaqAI TTAA 5 cut(s) 351, 560, 752, 1094, 1346
SatI GCNGC 5 cut(s) 213, 505, 606, 938, 1157
Sau3AI GATC 4 cut(s) 386, 434, 675, 1132
Sau96I GGNCC 5 cut(s) 688, 795, 847, 930, 951
SchI GAGTC 1 cut(s) 754
ScrFI CCNGG 5 cut(s) 417, 793, 855, 1305, 1436
SduI GDGCHC 3 cut(s) 168, 639, 1072
SfaNI GCATC 4 cut(s) 322, 573, 1440, 1525
SfcI CTRYAG 1 cut(s) 591
SinI GGWCC 3 cut(s) 688, 795, 951
SmiMI CAYNNNNRTG 2 cut(s) 246, 1245
SmlI CTYRAG 3 cut(s) 350, 832, 1345
SmoI CTYRAG 3 cut(s) 350, 832, 1345
SpeI ACTAGT 1 cut(s) 1264
SsiI CCGC 4 cut(s) 263, 484, 598, 1148
SspMI CTAG 4 cut(s) 18, 1002, 1265, 1290
StyD4I CCNGG 5 cut(s) 415, 791, 853, 1303, 1434
TaaI ACNGT 7 cut(s) 537, 557, 577, 592, 621, 727, 1030
TaqI TCGA 4 cut(s) 433, 495, 639, 1255
TatI WGTACW 2 cut(s) 444, 616
TfiI GAWTC 3 cut(s) 195, 641, 1331
Tru1I TTAA 5 cut(s) 351, 560, 752, 1094, 1346
Tru9I TTAA 5 cut(s) 351, 560, 752, 1094, 1346
TscAI CASTG 5 cut(s) 37, 175, 678, 985, 1125
TseFI GTSAC 4 cut(s) 551, 665, 976, 1312
TseI GCWGC 5 cut(s) 212, 504, 605, 937, 1156
Tsp45I GTSAC 4 cut(s) 551, 665, 976, 1312
TspDTI ATGAA 4 cut(s) 102, 371, 442, 1527
TspGWI ACGGA 2 cut(s) 539, 1287
TspRI CASTG 5 cut(s) 37, 175, 678, 985, 1125
Van91I CCANNNNNTGG 1 cut(s) 497
Vha464I CTTAAG 2 cut(s) 350, 1345
VpaK11BI GGWCC 3 cut(s) 688, 795, 951
XagI CCTNNNNNAGG 2 cut(s) 420, 1325
XceI RCATGY 1 cut(s) 251
XmnI GAANNNNTTC 2 cut(s) 873, 1518
XspI CTAG 4 cut(s) 18, 1002, 1265, 1290
Zsp2I ATGCAT 2 cut(s) 337, 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.