Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0011331

Physical Location & Seq

Genomic Coordinates Reverse (-)

12002245 .. 12005667

Gene Structure 3423 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G084800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1224 bp

ATGGAGAGCATAGCAGTGTGGCAAGGGGCAACACTCTGTGGGATTGTGTTATGGATTATAGTAGCTTCATATCTCGATGTGACTCGAAAGCTTCGATCTTTTCTGCAACCATGGGTGGCTCAGCATGTCACCACAGACACTCCTCTCATCCTCCAGATCCAGAATTACCAGCATAGGTTCTTGGATGCTTTCTTCGCTGGCTTGTCCTGTGTTGTTTCTGTGCCCTTTTATACTGCCTTTCTTCCTTTGCTTTTCTGGAGTGGGCATGGAAAATTGGCTAGACAAATGACCCTGTTGATGGCTTTCTGTGATTATATGGGGAACTGTATAAAGGATGTGGTATCAGCTCCTAGACCTAGTTGTCCACCTGTTAGAAGAATAACCGCTACAAAAGATGAGGAAGATAATGCATTGGAATATGGATTGCCATCTTCTCACACTCTAAACACAGTTTGCTTGTCCGGGTACCTTTTGCATTACATCCTATCATATACTCAGAATGAAGATTCCCATGTTAAGTTTGCTGGATTCGCTCTTGTTTGCTTGCTTGTGGGTCTCATTGGTTTAGGAAGGATTTATCTCGGCATGCACAGTGTGGTTGATATCATAGGTGGGCTTGCTATTGGATTGGTGATCCTTAGGTTCTGGCTCAGTGTTCATGAATATGTTGACAATTTTATAGTCTTGGGACAAAATGTTACATACTTTTGGGCCGCCCTGAGCTTCATTTTGCTCTTTGCTTATCCAACTCCTGAATTTCCAACTCCAAGTTTTGAGTACCACACAGCCTTCAATGGTGTTGCATTAGGAATTGTATCTGGGGTCCAGCAGACATACCATCAGTTTCACCATGAAGCTGTTCCACGTGTATTTACGTCACAATTAACAATCCCTGGCTTTATGGGAAGAATGCTTGTGGGGATACCGACAATACTTATTGTGAAGTTCTGCAGTAAAGCTCTTGCTAAATGGATTCTTCCAGTGCTAGCTAACACCTTGGGCATTTCAATAAAGTCCACCACTTACATTGCGTCGCTAAAGGGTTCAAGTAATGGGAAAAAATCAGATGGGTTGAAGCAATCAGGTTATGTCCAAAAGCTGTTCTTTTTCTCCAGCCAAGACTCATTTGATGTTGATACTGGTATACGATTCCTTCAGTATGCGGGCCTGGCATGGTCTGTGGTAGATCTTGTTCCCTCCCTTTTCACTCATTTAAGCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0006643 GO:0006665 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010118 GO:0012505 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0030148 GO:0031984 GO:0033993 GO:0042175 GO:0042221 GO:0042392 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046467 GO:0050896 GO:0071704 GO:0090332 GO:0097305 GO:0098827 GO:1901564 GO:1901566 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00600 ko04071 map00600 map04071

Pfam Domains

Protein Families

PAP2

Protein Analysis

408

Amino Acids

45.21

Weight (kDa)

8.06

Isoelectric Point (pI)

33.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G58490 AT3G58490
fragaria_vesca	FvH4_6g21550 FvH4_6g21550
malus_domestica	MD12G1052800.v1.1 MD14G1051200.v1.1
prunus_persica	Prupe.7G084800_v2.0.a1
pyrus_communis	pycom12g04610 pycom14g04240
rosa_chinensis	RchiOBHm_Chr3g0478791
rosa_laevigata	RLG00000023625
rosa_multiflora	Rmu_sc0001519.1_g000004 Rmu_sc0005751.1_g000001
rosa_roxburghii	Rroxscaffold_6G00403070
rosa_rugosa	Rorug03G0168200
rosa_samantha	Rh3AG220000 Rh3BG251800 Rh3CG248700 Rh3DG244900
rosa_wichuraiana	Rw3G019770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	360
Acc65I	GGTACC	1 cut(s)	465
AccB1I	GGYRCC	1 cut(s)	465
AccI	GTMKAC	1 cut(s)	1144
AciI	CCGC	3 cut(s)	384, 714, 1163
AclWI	GGATC	2 cut(s)	151, 628
AcsI	RAATTY	1 cut(s)	755
AcuI	CTGAAG	1 cut(s)	1139
AcvI	CACGTG	1 cut(s)	866
AdeI	CACNNNGTG	2 cut(s)	38, 595
AfaI	GTAC	2 cut(s)	467, 779
AfiI	CCNNNNNNNGG	1 cut(s)	298
AflIII	ACRYGT	1 cut(s)	865
AgsI	TTSAA	4 cut(s)	793, 1008, 1047, 1075
AjnI	CCWGG	2 cut(s)	892, 1167
AluBI	AGCT	9 cut(s)	65, 91, 347, 723, 857, 959, 989, 1099, 1218
AluI	AGCT	9 cut(s)	65, 91, 347, 723, 857, 959, 989, 1099, 1218
Alw26I	GTCTC	1 cut(s)	560
AlwI	GGATC	2 cut(s)	151, 628
AoxI	GGCC	2 cut(s)	711, 1165
ApoI	RAATTY	1 cut(s)	755
Asp700I	GAANNNNTTC	1 cut(s)	858
Asp718I	GGTACC	1 cut(s)	465
AspS9I	GGNCC	3 cut(s)	711, 823, 1165
AsuC2I	CCSGG	1 cut(s)	463
AsuHPI	GGTGA	3 cut(s)	121, 643, 839
AsuNHI	GCTAGC	1 cut(s)	985
AvaII	GGWCC	1 cut(s)	823
AxyI	CCTNAGG	1 cut(s)	638
BaeGI	GKGCMC	1 cut(s)	225
BanI	GGYRCC	1 cut(s)	465
BbrPI	CACGTG	1 cut(s)	866
BccI	CCATC	4 cut(s)	292, 436, 846, 1061
BciT130I	CCWGG	2 cut(s)	894, 1169
BciVI	GTATCC	1 cut(s)	915
BcnI	CCSGG	1 cut(s)	463
BcoDI	GTCTC	1 cut(s)	560
BfaI	CTAG	4 cut(s)	279, 351, 357, 986
BfmI	CTRYAG	1 cut(s)	949
BfuI	GTATCC	1 cut(s)	915
BglII	AGATCT	1 cut(s)	1186
BisI	GCNGC	1 cut(s)	714
BlpI	GCTNAGC	1 cut(s)	120
BlsI	GCNGC	1 cut(s)	715
Bme1390I	CCNGG	3 cut(s)	463, 894, 1169
Bme18I	GGWCC	1 cut(s)	823
BmgT120I	GGNCC	3 cut(s)	711, 823, 1165
BmiI	GGNNCC	2 cut(s)	467, 824
BmrFI	CCNGG	3 cut(s)	463, 894, 1169
BmsI	GCATC	1 cut(s)	175
BmtI	GCTAGC	1 cut(s)	989
BpmI	CTGGAG	3 cut(s)	137, 277, 1096
Bpu10I	CCTNAGC	1 cut(s)	719
Bpu1102I	GCTNAGC	1 cut(s)	120
BpuMI	CCSGG	1 cut(s)	463
BsaAI	YACGTR	1 cut(s)	866
BsaBI	GATNNNNATC	1 cut(s)	427
BsaI	GGTCTC	1 cut(s)	560
BsaJI	CCNNGG	3 cut(s)	110, 892, 996
BsaXI	ACNNNNNCTCC	2 cut(s)	124, 154
Bsc4I	CCNNNNNNNGG	1 cut(s)	298
Bse1I	ACTGG	2 cut(s)	980, 1144
Bse21I	CCTNAGG	1 cut(s)	638
Bse3DI	GCAATG	1 cut(s)	1026
Bse8I	GATNNNNATC	1 cut(s)	427
BseBI	CCWGG	2 cut(s)	894, 1169
BseDI	CCNNGG	3 cut(s)	110, 892, 996
BseGI	GGATG	4 cut(s)	147, 190, 340, 480
BseJI	GATNNNNATC	1 cut(s)	427
BseLI	CCNNNNNNNGG	1 cut(s)	298
BseMI	GCAATG	1 cut(s)	1026
BseMII	CTCAG	4 cut(s)	134, 509, 664, 710
BseNI	ACTGG	2 cut(s)	980, 1144
BseRI	GAGGAG	1 cut(s)	132
BseSI	GKGCMC	1 cut(s)	225
BshFI	GGCC	2 cut(s)	713, 1167
BshNI	GGYRCC	1 cut(s)	465
BsiSI	CCGG	1 cut(s)	462
BslFI	GGGAC	1 cut(s)	702
BslI	CCNNNNNNNGG	1 cut(s)	298
BsmAI	GTCTC	1 cut(s)	560
BsmFI	GGGAC	1 cut(s)	702
BsmI	GAATGC	1 cut(s)	915
BsnI	GGCC	2 cut(s)	713, 1167
Bso31I	GGTCTC	1 cut(s)	560
Bsp1286I	GDGCHC	1 cut(s)	225
Bsp143I	GATC	4 cut(s)	95, 156, 633, 1186
Bsp1720I	GCTNAGC	1 cut(s)	120
Bsp19I	CCATGG	1 cut(s)	110
BspACI	CCGC	3 cut(s)	384, 714, 1163
BspANI	GGCC	2 cut(s)	713, 1167
BspCNI	CTCAG	4 cut(s)	133, 508, 663, 711
BspHI	TCATGA	1 cut(s)	658
BspLI	GGNNCC	2 cut(s)	467, 824
BspMAI	CTGCAG	1 cut(s)	953
BspOI	GCTAGC	1 cut(s)	989
BspPI	GGATC	2 cut(s)	151, 628
BspT107I	GGYRCC	1 cut(s)	465
BspTNI	GGTCTC	1 cut(s)	560
BsrDI	GCAATG	1 cut(s)	1026
BsrI	ACTGG	2 cut(s)	980, 1144
BssECI	CCNNGG	3 cut(s)	110, 892, 996
BssMI	GATC	4 cut(s)	95, 156, 633, 1186
BssNAI	GTATAC	1 cut(s)	1145
BssT1I	CCWWGG	2 cut(s)	110, 996
Bst1107I	GTATAC	1 cut(s)	1145
Bst2UI	CCWGG	2 cut(s)	894, 1169
Bst4CI	ACNGT	3 cut(s)	326, 451, 593
BstBAI	YACGTR	1 cut(s)	866
BstC8I	GCNNGC	6 cut(s)	199, 545, 587, 618, 987, 1165
BstDEI	CTNAG	5 cut(s)	120, 495, 638, 650, 719
BstDSI	CCRYGG	1 cut(s)	110
BstF5I	GGATG	4 cut(s)	147, 190, 340, 480
BstKTI	GATC	4 cut(s)	98, 159, 636, 1189
BstMAI	GTCTC	1 cut(s)	560
BstMBI	GATC	4 cut(s)	95, 156, 633, 1186
BstMWI	GCNNNNNNNGC	3 cut(s)	194, 530, 1169
BstNI	CCWGG	2 cut(s)	894, 1169
BstNSI	RCATGY	2 cut(s)	128, 589
BstSCI	CCNGG	3 cut(s)	461, 892, 1167
BstSFI	CTRYAG	1 cut(s)	949
BstSLI	GKGCMC	1 cut(s)	225
BstX2I	RGATCY	2 cut(s)	156, 1186
BstYI	RGATCY	2 cut(s)	156, 1186
BstZ17I	GTATAC	1 cut(s)	1145
Bsu36I	CCTNAGG	1 cut(s)	638
BsuI	GTATCC	1 cut(s)	915
BsuRI	GGCC	2 cut(s)	713, 1167
BtgI	CCRYGG	1 cut(s)	110
BtsCI	GGATG	4 cut(s)	147, 190, 340, 480
BtsI	GCAGTG	1 cut(s)	21
BtsIMutI	CAGTG	4 cut(s)	21, 598, 658, 987
Cac8I	GCNNGC	6 cut(s)	199, 545, 587, 618, 987, 1165
CciI	TCATGA	1 cut(s)	658
Cfr13I	GGNCC	3 cut(s)	711, 823, 1165
CseI	GACGC	1 cut(s)	1020
Csp6I	GTAC	2 cut(s)	466, 778
CspCI	CAANNNNNGTGG	2 cut(s)	1009, 1044
CviAII	CATG	8 cut(s)	111, 125, 266, 512, 586, 659, 851, 1173
CviQI	GTAC	2 cut(s)	466, 778
DdeI	CTNAG	5 cut(s)	120, 495, 638, 650, 719
DpnI	GATC	4 cut(s)	97, 158, 635, 1188
DpnII	GATC	4 cut(s)	95, 156, 633, 1186
DraIII	CACNNNGTG	2 cut(s)	38, 595
DrdI	GACNNNNNNGTC	1 cut(s)	360
DseDI	GACNNNNNNGTC	1 cut(s)	360
Eco130I	CCWWGG	2 cut(s)	110, 996
Eco31I	GGTCTC	1 cut(s)	560
Eco32I	GATATC	1 cut(s)	604
Eco47I	GGWCC	1 cut(s)	823
Eco57I	CTGAAG	1 cut(s)	1139
Eco72I	CACGTG	1 cut(s)	866
Eco81I	CCTNAGG	1 cut(s)	638
EcoRII	CCWGG	2 cut(s)	892, 1167
EcoRV	GATATC	1 cut(s)	604
EcoT14I	CCWWGG	2 cut(s)	110, 996
EcoT22I	ATGCAT	1 cut(s)	412
ErhI	CCWWGG	2 cut(s)	110, 996
FaeI	CATG	8 cut(s)	114, 128, 269, 515, 589, 662, 854, 1176
FalI	AAGNNNNNCTT	2 cut(s)	1088, 1120
FaqI	GGGAC	1 cut(s)	702
FatI	CATG	8 cut(s)	110, 124, 265, 511, 585, 658, 850, 1172
FauI	CCCGC	1 cut(s)	1156
FblI	GTMKAC	1 cut(s)	1144
Fnu4HI	GCNGC	1 cut(s)	714
FokI	GGATG	4 cut(s)	134, 197, 347, 467
Fsp4HI	GCNGC	1 cut(s)	714
FspBI	CTAG	4 cut(s)	279, 351, 357, 986
GluI	GCNGC	1 cut(s)	714
GsuI	CTGGAG	3 cut(s)	137, 277, 1096
HaeIII	GGCC	2 cut(s)	713, 1167
HapII	CCGG	1 cut(s)	462
HgaI	GACGC	1 cut(s)	1020
Hin1II	CATG	8 cut(s)	114, 128, 269, 515, 589, 662, 854, 1176
HincII	GTYRAC	1 cut(s)	670
HindII	GTYRAC	1 cut(s)	670
HindIII	AAGCTT	2 cut(s)	89, 1216
HinfI	GANTC	6 cut(s)	82, 506, 528, 973, 1121, 1149
HpaII	CCGG	1 cut(s)	462
HphI	GGTGA	3 cut(s)	121, 643, 839
Hpy166II	GTNNAC	4 cut(s)	365, 670, 1017, 1145
Hpy188I	TCNGA	2 cut(s)	498, 1066
Hpy188III	TCNNGA	6 cut(s)	74, 154, 160, 256, 659, 752
Hpy8I	GTNNAC	4 cut(s)	365, 670, 1017, 1145
Hpy99I	CGWCG	1 cut(s)	1036
HpyAV	CCTTC	3 cut(s)	564, 799, 1163
HpyCH4III	ACNGT	3 cut(s)	326, 451, 593
HpyCH4IV	ACGT	2 cut(s)	865, 875
HpyCH4V	TGCA	6 cut(s)	106, 410, 475, 589, 803, 951
HpyF10VI	GCNNNNNNNGC	3 cut(s)	194, 530, 1169
HpyF3I	CTNAG	5 cut(s)	120, 495, 638, 650, 719
HpySE526I	ACGT	2 cut(s)	865, 875
Hsp92II	CATG	8 cut(s)	114, 128, 269, 515, 589, 662, 854, 1176
KpnI	GGTACC	1 cut(s)	469
Kzo9I	GATC	4 cut(s)	95, 156, 633, 1186
LmnI	GCTCC	1 cut(s)	352
LweI	GCATC	1 cut(s)	175
MaeI	CTAG	4 cut(s)	279, 351, 357, 986
MaeII	ACGT	2 cut(s)	865, 875
MaeIII	GTNAC	4 cut(s)	79, 127, 697, 876
MalI	GATC	4 cut(s)	97, 158, 635, 1188
MboI	GATC	4 cut(s)	95, 156, 633, 1186
MboII	GAAGA	8 cut(s)	184, 233, 387, 413, 423, 515, 918, 968
MflI	RGATCY	2 cut(s)	156, 1186
MhlI	GDGCHC	1 cut(s)	225
MluCI	AATT	6 cut(s)	163, 272, 673, 755, 810, 881
MlyI	GAGTC	2 cut(s)	76, 1115
MmeI	TCCRAC	2 cut(s)	770, 785
MnlI	CCTC	4 cut(s)	153, 161, 391, 1207
Mph1103I	ATGCAT	1 cut(s)	412
MroXI	GAANNNNTTC	1 cut(s)	858
MseI	TTAA	3 cut(s)	516, 884, 1214
MslI	CAYNNNNRTG	2 cut(s)	14, 663
MspI	CCGG	1 cut(s)	462
MspR9I	CCNGG	3 cut(s)	463, 894, 1169
Mva1269I	GAATGC	1 cut(s)	915
MvaI	CCWGG	2 cut(s)	894, 1169
MwoI	GCNNNNNNNGC	3 cut(s)	194, 530, 1169
NciI	CCSGG	1 cut(s)	463
NcoI	CCATGG	1 cut(s)	110
NdeII	GATC	4 cut(s)	95, 156, 633, 1186
NheI	GCTAGC	1 cut(s)	985
NlaIII	CATG	8 cut(s)	114, 128, 269, 515, 589, 662, 854, 1176
NlaIV	GGNNCC	2 cut(s)	467, 824
NmeAIII	GCCGAG	1 cut(s)	561
NmuCI	GTSAC	3 cut(s)	79, 127, 876
NsiI	ATGCAT	1 cut(s)	412
NspI	RCATGY	2 cut(s)	128, 589
PaeI	GCATGC	1 cut(s)	589
PagI	TCATGA	1 cut(s)	658
PcsI	WCGNNNNNNNCGW	1 cut(s)	91
PctI	GAATGC	1 cut(s)	915
PdmI	GAANNNNTTC	1 cut(s)	858
PfeI	GAWTC	4 cut(s)	506, 528, 973, 1149
PkrI	GCNGC	1 cut(s)	715
PleI	GAGTC	2 cut(s)	76, 1115
PmaCI	CACGTG	1 cut(s)	866
PmlI	CACGTG	1 cut(s)	866
PpsI	GAGTC	2 cut(s)	76, 1115
Ppu21I	YACGTR	1 cut(s)	866
Psp6I	CCWGG	2 cut(s)	892, 1167
PspCI	CACGTG	1 cut(s)	866
PspGI	CCWGG	2 cut(s)	892, 1167
PspN4I	GGNNCC	2 cut(s)	467, 824
PspPI	GGNCC	3 cut(s)	711, 823, 1165
PsrI	GAACNNNNNNTAC	2 cut(s)	1176, 1208
PstI	CTGCAG	1 cut(s)	953
PsuI	RGATCY	2 cut(s)	156, 1186
RsaI	GTAC	2 cut(s)	467, 779
RsaNI	GTAC	2 cut(s)	466, 778
RseI	CAYNNNNRTG	2 cut(s)	14, 663
SaqAI	TTAA	3 cut(s)	516, 884, 1214
SatI	GCNGC	1 cut(s)	714
Sau3AI	GATC	4 cut(s)	95, 156, 633, 1186
Sau96I	GGNCC	3 cut(s)	711, 823, 1165
SchI	GAGTC	2 cut(s)	76, 1115
ScrFI	CCNGG	3 cut(s)	463, 894, 1169
SduI	GDGCHC	1 cut(s)	225
SfaNI	GCATC	1 cut(s)	175
SfcI	CTRYAG	1 cut(s)	949
SinI	GGWCC	1 cut(s)	823
SmiMI	CAYNNNNRTG	2 cut(s)	14, 663
SphI	GCATGC	1 cut(s)	589
Sse9I	AATT	6 cut(s)	163, 272, 673, 755, 810, 881
SsiI	CCGC	3 cut(s)	384, 714, 1163
SspMI	CTAG	4 cut(s)	279, 351, 357, 986
StyD4I	CCNGG	3 cut(s)	461, 892, 1167
StyI	CCWWGG	2 cut(s)	110, 996
TaaI	ACNGT	3 cut(s)	326, 451, 593
TaiI	ACGT	2 cut(s)	868, 878
TaqI	TCGA	3 cut(s)	75, 85, 94
TasI	AATT	6 cut(s)	163, 272, 673, 755, 810, 881
TauI	GCSGC	1 cut(s)	716
TfiI	GAWTC	4 cut(s)	506, 528, 973, 1149
Tru1I	TTAA	3 cut(s)	516, 884, 1214
Tru9I	TTAA	3 cut(s)	516, 884, 1214
TscAI	CASTG	4 cut(s)	21, 598, 658, 987
TseFI	GTSAC	3 cut(s)	79, 127, 876
Tsp45I	GTSAC	3 cut(s)	79, 127, 876
TspDTI	ATGAA	6 cut(s)	57, 516, 647, 675, 715, 867
TspRI	CASTG	4 cut(s)	21, 598, 658, 987
VpaK11BI	GGWCC	1 cut(s)	823
XapI	RAATTY	1 cut(s)	755
XceI	RCATGY	2 cut(s)	128, 589
XmiI	GTMKAC	1 cut(s)	1144
XmnI	GAANNNNTTC	1 cut(s)	858
XspI	CTAG	4 cut(s)	279, 351, 357, 986
Zsp2I	ATGCAT	1 cut(s)	412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.