Ubiquitin-conjugating enzyme E2, catalytic domain homologues
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52560 AT3G52560 AT3G52560 AT3G52560 |
| fragaria_vesca | FvH4_6g19850 |
| malus_domestica | MD12G1034000.v1.1 MD14G1035400.v1.1 |
| prunus_persica | Prupe.7G098800_v2.0.a1 Prupe.7G098800_v2.0.a1 |
| pyrus_communis | pycom14g03110 |
| rosa_chinensis | RchiOBHm_Chr3g0475251 |
| rosa_laevigata | RLG00000023856 |
| rosa_multiflora | Rmu_co8404831.1_g000001 Rmu_sc0003093.1_g000044 |
| rosa_roxburghii | Rroxscaffold_6G00406430 |
| rosa_rugosa | Rorug03G0147500 |
| rosa_wichuraiana | Rw3G017950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 152, 428 |
| AccB1I | GGYRCC | 2 cut(s) | 152, 428 |
| AclWI | GGATC | 1 cut(s) | 28 |
| AcsI | RAATTY | 1 cut(s) | 314 |
| AcuI | CTGAAG | 1 cut(s) | 31 |
| AdeI | CACNNNGTG | 1 cut(s) | 245 |
| AfaI | GTAC | 4 cut(s) | 154, 180, 347, 430 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 409, 425 |
| AgsI | TTSAA | 2 cut(s) | 68, 205 |
| AluBI | AGCT | 3 cut(s) | 105, 208, 373 |
| AluI | AGCT | 3 cut(s) | 105, 208, 373 |
| AlwI | GGATC | 1 cut(s) | 28 |
| ApeKI | GCWGC | 1 cut(s) | 337 |
| ApoI | RAATTY | 1 cut(s) | 314 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 209 |
| Asp718I | GGTACC | 2 cut(s) | 152, 428 |
| AspS9I | GGNCC | 4 cut(s) | 34, 164, 320, 412 |
| AvaII | GGWCC | 4 cut(s) | 34, 164, 320, 412 |
| BanI | GGYRCC | 2 cut(s) | 152, 428 |
| BbvI | GCAGC | 1 cut(s) | 349 |
| BccI | CCATC | 3 cut(s) | 86, 164, 379 |
| BfaI | CTAG | 2 cut(s) | 8, 439 |
| BisI | GCNGC | 1 cut(s) | 338 |
| BlsI | GCNGC | 1 cut(s) | 339 |
| Bme18I | GGWCC | 4 cut(s) | 34, 164, 320, 412 |
| BmgT120I | GGNCC | 4 cut(s) | 34, 164, 320, 412 |
| BmiI | GGNNCC | 5 cut(s) | 36, 154, 166, 306, 430 |
| BmsI | GCATC | 1 cut(s) | 398 |
| BpmI | CTGGAG | 3 cut(s) | 77, 315, 405 |
| BsaJI | CCNNGG | 1 cut(s) | 351 |
| BsaWI | WCCGGW | 1 cut(s) | 402 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 409, 425 |
| Bse1I | ACTGG | 3 cut(s) | 154, 298, 338 |
| BseDI | CCNNGG | 1 cut(s) | 351 |
| BseGI | GGATG | 3 cut(s) | 97, 121, 389 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 409, 425 |
| BseMII | CTCAG | 1 cut(s) | 222 |
| BseNI | ACTGG | 3 cut(s) | 154, 298, 338 |
| BseXI | GCAGC | 1 cut(s) | 349 |
| BshNI | GGYRCC | 2 cut(s) | 152, 428 |
| BsiSI | CCGG | 1 cut(s) | 403 |
| BslFI | GGGAC | 2 cut(s) | 20, 150 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 409, 425 |
| BsmFI | GGGAC | 2 cut(s) | 20, 150 |
| Bsp143I | GATC | 1 cut(s) | 20 |
| Bsp19I | CCATGG | 1 cut(s) | 351 |
| BspCNI | CTCAG | 1 cut(s) | 223 |
| BspLI | GGNNCC | 5 cut(s) | 36, 154, 166, 306, 430 |
| BspPI | GGATC | 1 cut(s) | 28 |
| BspT107I | GGYRCC | 2 cut(s) | 152, 428 |
| BsrI | ACTGG | 3 cut(s) | 154, 298, 338 |
| BssECI | CCNNGG | 1 cut(s) | 351 |
| BssMI | GATC | 1 cut(s) | 20 |
| BssT1I | CCWWGG | 1 cut(s) | 351 |
| Bst4CI | ACNGT | 2 cut(s) | 100, 178 |
| BstDEI | CTNAG | 1 cut(s) | 231 |
| BstDSI | CCRYGG | 1 cut(s) | 351 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 423 |
| BstF5I | GGATG | 3 cut(s) | 97, 121, 389 |
| BstKTI | GATC | 1 cut(s) | 23 |
| BstMBI | GATC | 1 cut(s) | 20 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 102 |
| BstNSI | RCATGY | 1 cut(s) | 139 |
| BstV1I | GCAGC | 1 cut(s) | 349 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 293 |
| BtgI | CCRYGG | 1 cut(s) | 351 |
| BtsCI | GGATG | 3 cut(s) | 97, 121, 389 |
| BtsIMutI | CAGTG | 1 cut(s) | 96 |
| Cfr13I | GGNCC | 4 cut(s) | 34, 164, 320, 412 |
| CseI | GACGC | 1 cut(s) | 13 |
| Csp6I | GTAC | 4 cut(s) | 153, 179, 346, 429 |
| CviAII | CATG | 5 cut(s) | 136, 182, 271, 287, 352 |
| CviJI | RGCY | 5 cut(s) | 105, 208, 238, 373, 418 |
| CviKI_1 | RGCY | 5 cut(s) | 105, 208, 238, 373, 418 |
| CviQI | GTAC | 4 cut(s) | 153, 179, 346, 429 |
| DdeI | CTNAG | 1 cut(s) | 231 |
| DpnI | GATC | 1 cut(s) | 22 |
| DpnII | GATC | 1 cut(s) | 20 |
| DraIII | CACNNNGTG | 1 cut(s) | 245 |
| Eco130I | CCWWGG | 1 cut(s) | 351 |
| Eco47I | GGWCC | 4 cut(s) | 34, 164, 320, 412 |
| Eco57I | CTGAAG | 1 cut(s) | 31 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 423 |
| EcoT14I | CCWWGG | 1 cut(s) | 351 |
| ErhI | CCWWGG | 1 cut(s) | 351 |
| FaeI | CATG | 5 cut(s) | 139, 185, 274, 290, 355 |
| FaiI | YATR | 8 cut(s) | 108, 137, 183, 272, 288, 353, 362, 399 |
| FaqI | GGGAC | 2 cut(s) | 20, 150 |
| FatI | CATG | 5 cut(s) | 135, 181, 270, 286, 351 |
| Fnu4HI | GCNGC | 1 cut(s) | 338 |
| FokI | GGATG | 3 cut(s) | 104, 128, 376 |
| Fsp4HI | GCNGC | 1 cut(s) | 338 |
| FspBI | CTAG | 2 cut(s) | 8, 439 |
| GluI | GCNGC | 1 cut(s) | 338 |
| GsuI | CTGGAG | 3 cut(s) | 77, 315, 405 |
| HapII | CCGG | 1 cut(s) | 403 |
| HgaI | GACGC | 1 cut(s) | 13 |
| Hin1II | CATG | 5 cut(s) | 139, 185, 274, 290, 355 |
| HincII | GTYRAC | 1 cut(s) | 283 |
| HindII | GTYRAC | 1 cut(s) | 283 |
| HinfI | GANTC | 1 cut(s) | 192 |
| HpaI | GTTAAC | 1 cut(s) | 283 |
| HpaII | CCGG | 1 cut(s) | 403 |
| Hpy166II | GTNNAC | 2 cut(s) | 283, 348 |
| Hpy188I | TCNGA | 1 cut(s) | 50 |
| Hpy188III | TCNNGA | 2 cut(s) | 15, 422 |
| Hpy8I | GTNNAC | 2 cut(s) | 283, 348 |
| HpyAV | CCTTC | 2 cut(s) | 179, 419 |
| HpyCH4III | ACNGT | 2 cut(s) | 100, 178 |
| HpyCH4IV | ACGT | 1 cut(s) | 70 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 102 |
| HpyF3I | CTNAG | 1 cut(s) | 231 |
| HpySE526I | ACGT | 1 cut(s) | 70 |
| Hsp92II | CATG | 5 cut(s) | 139, 185, 274, 290, 355 |
| KpnI | GGTACC | 2 cut(s) | 156, 432 |
| KspAI | GTTAAC | 1 cut(s) | 283 |
| Kzo9I | GATC | 1 cut(s) | 20 |
| LpnPI | CCDG | 8 cut(s) | 41, 135, 243, 279, 319, 416, 428, 435 |
| Lsp1109I | GCAGC | 1 cut(s) | 349 |
| LweI | GCATC | 1 cut(s) | 398 |
| MaeI | CTAG | 2 cut(s) | 8, 439 |
| MaeII | ACGT | 1 cut(s) | 70 |
| MalI | GATC | 1 cut(s) | 22 |
| MboI | GATC | 1 cut(s) | 20 |
| MboII | GAAGA | 1 cut(s) | 322 |
| MluCI | AATT | 1 cut(s) | 314 |
| MnlI | CCTC | 5 cut(s) | 11, 52, 333, 349, 429 |
| MroXI | GAANNNNTTC | 1 cut(s) | 209 |
| MseI | TTAA | 2 cut(s) | 267, 282 |
| MslI | CAYNNNNRTG | 1 cut(s) | 134 |
| MspA1I | CMGCKG | 1 cut(s) | 373 |
| MspI | CCGG | 1 cut(s) | 403 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 102 |
| NcoI | CCATGG | 1 cut(s) | 351 |
| NdeII | GATC | 1 cut(s) | 20 |
| NlaIII | CATG | 5 cut(s) | 139, 185, 274, 290, 355 |
| NlaIV | GGNNCC | 5 cut(s) | 36, 154, 166, 306, 430 |
| NspI | RCATGY | 1 cut(s) | 139 |
| PdmI | GAANNNNTTC | 1 cut(s) | 209 |
| PfeI | GAWTC | 1 cut(s) | 192 |
| PkrI | GCNGC | 1 cut(s) | 339 |
| PspN4I | GGNNCC | 5 cut(s) | 36, 154, 166, 306, 430 |
| PspPI | GGNCC | 4 cut(s) | 34, 164, 320, 412 |
| PvuII | CAGCTG | 1 cut(s) | 373 |
| RsaI | GTAC | 4 cut(s) | 154, 180, 347, 430 |
| RsaNI | GTAC | 4 cut(s) | 153, 179, 346, 429 |
| RseI | CAYNNNNRTG | 1 cut(s) | 134 |
| SaqAI | TTAA | 2 cut(s) | 267, 282 |
| SatI | GCNGC | 1 cut(s) | 338 |
| Sau3AI | GATC | 1 cut(s) | 20 |
| Sau96I | GGNCC | 4 cut(s) | 34, 164, 320, 412 |
| SfaNI | GCATC | 1 cut(s) | 398 |
| SinI | GGWCC | 4 cut(s) | 34, 164, 320, 412 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 134 |
| Sse9I | AATT | 1 cut(s) | 314 |
| SspMI | CTAG | 2 cut(s) | 8, 439 |
| StyI | CCWWGG | 1 cut(s) | 351 |
| TaaI | ACNGT | 2 cut(s) | 100, 178 |
| TaiI | ACGT | 1 cut(s) | 73 |
| TaqI | TCGA | 1 cut(s) | 190 |
| TasI | AATT | 1 cut(s) | 314 |
| TatI | WGTACW | 1 cut(s) | 345 |
| TfiI | GAWTC | 1 cut(s) | 192 |
| Tru1I | TTAA | 2 cut(s) | 267, 282 |
| Tru9I | TTAA | 2 cut(s) | 267, 282 |
| TscAI | CASTG | 1 cut(s) | 103 |
| TseI | GCWGC | 1 cut(s) | 337 |
| TspDTI | ATGAA | 3 cut(s) | 198, 245, 303 |
| TspGWI | ACGGA | 2 cut(s) | 135, 277 |
| TspRI | CASTG | 1 cut(s) | 103 |
| VpaK11BI | GGWCC | 4 cut(s) | 34, 164, 320, 412 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 423 |
| XapI | RAATTY | 1 cut(s) | 314 |
| XceI | RCATGY | 1 cut(s) | 139 |
| XmnI | GAANNNNTTC | 1 cut(s) | 209 |
| XspI | CTAG | 2 cut(s) | 8, 439 |