Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0013917

Physical Location & Seq

Genomic Coordinates Forward (+)

12121824 .. 12123338

Gene Structure 1515 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0147500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGAAACCCATATTGTGCAGATTGAGAGAGATACAAAGGACAGTTCACACTTCAGCTTGTGCCCTTCTTACTGAAACCCAGAAAGCTAATGTCTATCTTGTTAGACATTCAAAGACCTCAGACACATTCTTGACTGCCCACCAAGTGTTCGACGAAACGCCTGACTTAAACGTGGTCTCGGCCACTACAATAATAGGCAGCTTTGCTCGGCAGCACCATCATGAACAAGCTGTGTATCTCTTTTCAAGAATGCTTGTTTTGAATATTCGACCCAATGAGTACACATTTGGCACTGTCATTCACTCCTCGACCGCGCTTGGAGATTTGAATATAGGCAAGCAACTTCATGCATGTGCAACAAAGATGGGTCTGCATTCGAATGTCTTCGTGGGTAGTGCAATTTTGGATCTTTATGCTAAGCTGAGCATAATCCAGGATGCTCGAAGAGCTTTCGAAGATACCCAGAAGCCGAATGTGGTTTCCTACACTACATTGATATGTGCTTACCTGAAAAAGGAGATGCTTGAAGATGCTCTCGAGCTTTTCCGAGTGATGCCAGAGAGGAATGTAGTTTCATGGAATGCGATGATTGGAGGGTATAGCCAAACAGGCCACAATGAAGAGGCTGTGAATCTTTTCATTGAGATGCTTCGAAATGGGTTGGTGCCGAGTCAGTCTACTTTTCCTTGTGCTATAATTGCAGCTGCCAATATAGCAGCACTAGGAATTGGGAGAAGCTTTCATGCCTGTGCTGTCAAGGCTTTGGGTAAGTTTGATGTGTTTATTAGCAATTCTCTAATAAGCTTTTATGCAAAATGTGGGAGCATGGAAGATAGTCTCTTGGTTTTCGATAAACTCAGGGGAAGAAACATTGTTTCTTGGAATGCTGTGATTTGTGGGTATGCTCAAAATGGTAAAGGAGAGGAAGCCATAAGTTTTTTCGAAAAGATGAGGGTCTCAGATTGTAAACCCAACAGTGTTACAGTTCTGGGGTTATTGTGGGCTTGTAATCATGCTGGTCTTGTTGACAAGGGTTACTCCTATTTTAACCAGGCAAGAATGGAGGACGCCGGCATTCTAAAGCCCGAGCATTATGCTTGTATGGTTGATTTACTCTCGCGCTCAGGGTGTTTCAGACAAGCTGAGGAGTTTATTAGTGATTTGCCTTTTGAACCAGGTATTGGGTTTTGGAAGGCATTGCTTGGTGGCTGCCAAATCCACTCAAATATGGAATTGGGGGAGTTTGCTGCAAGAAGAATCTTGGCTTTGGATCCTGGAGATGTGTCATCATATGTTATGGTATCTAATGCACATTCTGCAGCTGGACGGTGGCAGAGTGTGTCAACAGTAAGGAGAGAAATGAAAGACAAAGGGATGAAGAGGATTCCAGGTTGCAGTTGGATAGAAATCAGAAGCAAAGTTCATGTATTTACCACCGGCGATAAGAATCATCACCAAATGAATGAAATTTATACTGTGTTAGAAATTCTGTACAGAGCATTTGAGGGAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0033554 GO:0034641 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0061630 GO:0061659 GO:0070534 GO:0070647 GO:0071704 GO:0090304 GO:0140096 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04624 map04624

Pfam Domains

Protein Families

UQ_con

Protein Analysis

504

Amino Acids

56.15

Weight (kDa)

7.59

Isoelectric Point (pI)

45.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	57 - 101	8.2e-09	PPR repeat family
PPR_1	PF12854	156 - 185	6.5e-07	PPR repeat
PPR_2	PF13041	157 - 190	3.3e-08	PPR repeat family
PPR	PF01535	160 - 190	6.9e-07	PPR repeat
PPR_2	PF13041	188 - 229	3.4e-11	PPR repeat family
PPR	PF01535	191 - 221	1.4e-08	PPR repeat
PPR_2	PF13041	289 - 333	2.6e-12	PPR repeat family
PPR	PF01535	292 - 322	8.8e-09	PPR repeat
E_motif	PF20431	407 - 469	2.9e-22	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52560 AT3G52560 AT3G52560 AT3G52560
fragaria_vesca	FvH4_6g19850
malus_domestica	MD12G1034000.v1.1 MD14G1035400.v1.1
prunus_persica	Prupe.7G098800_v2.0.a1 Prupe.7G098800_v2.0.a1
pyrus_communis	pycom14g03110
rosa_chinensis	RchiOBHm_Chr3g0475251
rosa_laevigata	RLG00000023856
rosa_multiflora	Rmu_co8404831.1_g000001 Rmu_sc0003093.1_g000044
rosa_roxburghii	Rroxscaffold_6G00406430
rosa_rugosa	Rorug03G0147500
rosa_wichuraiana	Rw3G017950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	664
AccB7I	CCANNNNNTGG	1 cut(s)	1181
AccI	GTMKAC	1 cut(s)	677
AccII	CGCG	2 cut(s)	314, 1120
AciI	CCGC	1 cut(s)	312
AclWI	GGATC	3 cut(s)	414, 1265, 1278
AcoI	YGGCCR	1 cut(s)	180
AcsI	RAATTY	2 cut(s)	1467, 1485
AcuI	CTGAAG	1 cut(s)	36
AcyI	GRCGYC	1 cut(s)	1068
AdeI	CACNNNGTG	1 cut(s)	145
AfaI	GTAC	2 cut(s)	281, 1493
AfiI	CCNNNNNNNGG	2 cut(s)	514, 1181
AgsI	TTSAA	6 cut(s)	111, 246, 262, 328, 527, 1172
AjnI	CCWGG	5 cut(s)	432, 1050, 1174, 1273, 1387
AjuI	GAANNNNNNNTTGG	2 cut(s)	1164, 1196
Alw26I	GTCTC	3 cut(s)	181, 842, 961
AlwI	GGATC	3 cut(s)	414, 1265, 1278
Ama87I	CYCGRG	2 cut(s)	536, 1085
AoxI	GGCC	2 cut(s)	180, 610
ApeKI	GCWGC	8 cut(s)	198, 211, 701, 704, 716, 1209, 1247, 1319
ApoI	RAATTY	2 cut(s)	1467, 1485
Asp700I	GAANNNNTTC	2 cut(s)	383, 635
AspLEI	GCGC	2 cut(s)	316, 1122
AsuHPI	GGTGA	1 cut(s)	1445
AsuII	TTCGAA	4 cut(s)	377, 453, 652, 942
AvaI	CYCGRG	2 cut(s)	536, 1085
BaeGI	GKGCMC	1 cut(s)	64
BamHI	GGATCC	1 cut(s)	1270
BanI	GGYRCC	1 cut(s)	664
BbsI	GAAGAC	1 cut(s)	376
BbvCI	CCTCAGC	1 cut(s)	1143
BbvI	GCAGC	8 cut(s)	210, 223, 691, 713, 728, 1196, 1234, 1331
BccI	CCATC	2 cut(s)	225, 358
BcgI	CGANNNNNNTGC	2 cut(s)	1076, 1110
BciT130I	CCWGG	5 cut(s)	434, 1052, 1176, 1275, 1389
BcoDI	GTCTC	3 cut(s)	181, 842, 961
BfaI	CTAG	1 cut(s)	722
BfmI	CTRYAG	1 cut(s)	1317
BglI	GCCNNNNNGGC	1 cut(s)	609
BisI	GCNGC	8 cut(s)	199, 212, 702, 705, 717, 1210, 1248, 1320
BlpI	GCTNAGC	2 cut(s)	417, 422
BlsI	GCNGC	8 cut(s)	200, 213, 703, 706, 718, 1211, 1249, 1321
Bme1390I	CCNGG	5 cut(s)	434, 1052, 1176, 1275, 1389
BmeT110I	CYCGRG	2 cut(s)	536, 1085
BmiI	GGNNCC	2 cut(s)	666, 1272
BmrFI	CCNGG	5 cut(s)	434, 1052, 1176, 1275, 1389
BmsI	GCATC	5 cut(s)	427, 510, 520, 543, 636
BpiI	GAAGAC	1 cut(s)	376
BpmI	CTGGAG	1 cut(s)	1296
Bpu10I	CCTNAGC	2 cut(s)	1123, 1143
Bpu1102I	GCTNAGC	2 cut(s)	417, 422
Bpu14I	TTCGAA	4 cut(s)	377, 453, 652, 942
BsaBI	GATNNNNATC	2 cut(s)	1406, 1446
BsaHI	GRCGYC	1 cut(s)	1068
BsaI	GGTCTC	2 cut(s)	181, 961
Bsc4I	CCNNNNNNNGG	2 cut(s)	514, 1181
Bse118I	RCCGGY	2 cut(s)	1070, 1436
Bse3DI	GCAATG	1 cut(s)	1196
Bse8I	GATNNNNATC	2 cut(s)	1406, 1446
BseBI	CCWGG	5 cut(s)	434, 1052, 1176, 1275, 1389
BseGI	GGATG	2 cut(s)	442, 1380
BseJI	GATNNNNATC	2 cut(s)	1406, 1446
BseLI	CCNNNNNNNGG	2 cut(s)	514, 1181
BseMI	GCAATG	1 cut(s)	1196
BseMII	CTCAG	6 cut(s)	132, 413, 871, 972, 1134, 1137
BseRI	GAGGAG	2 cut(s)	295, 1160
BseSI	GKGCMC	1 cut(s)	64
BseXI	GCAGC	8 cut(s)	210, 223, 691, 713, 728, 1196, 1234, 1331
BsgI	GTGCAG	1 cut(s)	37
Bsh1236I	CGCG	2 cut(s)	314, 1120
Bsh1285I	CGRYCG	1 cut(s)	312
BshFI	GGCC	2 cut(s)	182, 612
BshNI	GGYRCC	1 cut(s)	664
BsiEI	CGRYCG	1 cut(s)	312
BsiHKCI	CYCGRG	2 cut(s)	536, 1085
BsiSI	CCGG	2 cut(s)	1071, 1437
BslI	CCNNNNNNNGG	2 cut(s)	514, 1181
BsmAI	GTCTC	3 cut(s)	181, 842, 961
BsmI	GAATGC	5 cut(s)	255, 373, 586, 889, 1074
BsnI	GGCC	2 cut(s)	182, 612
Bso31I	GGTCTC	2 cut(s)	181, 961
BsoBI	CYCGRG	2 cut(s)	536, 1085
Bsp119I	TTCGAA	4 cut(s)	377, 453, 652, 942
Bsp1286I	GDGCHC	1 cut(s)	64
Bsp1407I	TGTACA	1 cut(s)	1491
Bsp143I	GATC	2 cut(s)	406, 1270
Bsp1720I	GCTNAGC	2 cut(s)	417, 422
BspACI	CCGC	1 cut(s)	312
BspANI	GGCC	2 cut(s)	182, 612
BspCNI	CTCAG	6 cut(s)	131, 414, 870, 971, 1135, 1136
BspFNI	CGCG	2 cut(s)	314, 1120
BspHI	TCATGA	1 cut(s)	220
BspLI	GGNNCC	2 cut(s)	666, 1272
BspMAI	CTGCAG	1 cut(s)	1321
BspPI	GGATC	3 cut(s)	414, 1265, 1278
BspQI	GCTCTTC	1 cut(s)	439
BspT104I	TTCGAA	4 cut(s)	377, 453, 652, 942
BspT107I	GGYRCC	1 cut(s)	664
BspTNI	GGTCTC	2 cut(s)	181, 961
BsrDI	GCAATG	1 cut(s)	1196
BsrFI	RCCGGY	2 cut(s)	1070, 1436
BsrGI	TGTACA	1 cut(s)	1491
BssAI	RCCGGY	2 cut(s)	1070, 1436
BssMI	GATC	2 cut(s)	406, 1270
BssNI	GRCGYC	1 cut(s)	1068
Bst2UI	CCWGG	5 cut(s)	434, 1052, 1176, 1275, 1389
Bst4CI	ACNGT	7 cut(s)	43, 295, 977, 985, 1329, 1348, 1477
Bst6I	CTCTTC	3 cut(s)	439, 615, 1373
BstACI	GRCGYC	1 cut(s)	1068
BstAPI	GCANNNNNTGC	1 cut(s)	1316
BstAUI	TGTACA	1 cut(s)	1491
BstBI	TTCGAA	4 cut(s)	377, 453, 652, 942
BstC8I	GCNNGC	2 cut(s)	338, 1072
BstDEI	CTNAG	7 cut(s)	118, 417, 422, 857, 958, 1123, 1143
BstENI	CCTNNNNNAGG	1 cut(s)	512
BstF5I	GGATG	2 cut(s)	442, 1380
BstFNI	CGCG	2 cut(s)	314, 1120
BstHHI	GCGC	2 cut(s)	316, 1122
BstKTI	GATC	2 cut(s)	409, 1273
BstMAI	GTCTC	3 cut(s)	181, 842, 961
BstMBI	GATC	2 cut(s)	406, 1270
BstMCI	CGRYCG	1 cut(s)	312
BstMWI	GCNNNNNNNGC	6 cut(s)	446, 609, 698, 713, 758, 1316
BstNI	CCWGG	5 cut(s)	434, 1052, 1176, 1275, 1389
BstNSI	RCATGY	1 cut(s)	354
BstSCI	CCNGG	5 cut(s)	432, 1050, 1174, 1273, 1387
BstSFI	CTRYAG	1 cut(s)	1317
BstSLI	GKGCMC	1 cut(s)	64
BstUI	CGCG	2 cut(s)	314, 1120
BstV1I	GCAGC	8 cut(s)	210, 223, 691, 713, 728, 1196, 1234, 1331
BstV2I	GAAGAC	1 cut(s)	376
BstX2I	RGATCY	2 cut(s)	406, 1270
BstYI	RGATCY	2 cut(s)	406, 1270
BsuRI	GGCC	2 cut(s)	182, 612
BtgZI	GCGATG	1 cut(s)	599
BtsCI	GGATG	2 cut(s)	442, 1380
BtsIMutI	CAGTG	2 cut(s)	291, 982
Cac8I	GCNNGC	2 cut(s)	338, 1072
CciI	TCATGA	1 cut(s)	220
CfoI	GCGC	2 cut(s)	316, 1122
Cfr10I	RCCGGY	2 cut(s)	1070, 1436
CseI	GACGC	1 cut(s)	1076
CsiI	ACCWGGT	1 cut(s)	1174
Csp6I	GTAC	2 cut(s)	280, 1492
CviAII	CATG	8 cut(s)	221, 347, 351, 576, 743, 826, 1013, 1424
CviQI	GTAC	2 cut(s)	280, 1492
DdeI	CTNAG	7 cut(s)	118, 417, 422, 857, 958, 1123, 1143
DpnI	GATC	2 cut(s)	408, 1272
DpnII	GATC	2 cut(s)	406, 1270
DraIII	CACNNNGTG	1 cut(s)	145
EaeI	YGGCCR	1 cut(s)	180
Eam1104I	CTCTTC	3 cut(s)	439, 615, 1373
EarI	CTCTTC	3 cut(s)	439, 615, 1373
Eco31I	GGTCTC	2 cut(s)	181, 961
Eco57I	CTGAAG	1 cut(s)	36
Eco88I	CYCGRG	2 cut(s)	536, 1085
EcoNI	CCTNNNNNAGG	1 cut(s)	512
EcoRII	CCWGG	5 cut(s)	432, 1050, 1174, 1273, 1387
EcoT22I	ATGCAT	1 cut(s)	352
FaeI	CATG	8 cut(s)	224, 350, 354, 579, 746, 829, 1016, 1427
FatI	CATG	8 cut(s)	220, 346, 350, 575, 742, 825, 1012, 1423
FauNDI	CATATG	1 cut(s)	1291
FblI	GTMKAC	1 cut(s)	677
Fnu4HI	GCNGC	8 cut(s)	199, 212, 702, 705, 717, 1210, 1248, 1320
FokI	GGATG	2 cut(s)	449, 1387
Fsp4HI	GCNGC	8 cut(s)	199, 212, 702, 705, 717, 1210, 1248, 1320
FspBI	CTAG	1 cut(s)	722
GlaI	GCGC	2 cut(s)	315, 1121
GluI	GCNGC	8 cut(s)	199, 212, 702, 705, 717, 1210, 1248, 1320
GsuI	CTGGAG	1 cut(s)	1296
HaeIII	GGCC	2 cut(s)	182, 612
HapII	CCGG	2 cut(s)	1071, 1437
HgaI	GACGC	1 cut(s)	1076
HhaI	GCGC	2 cut(s)	316, 1122
Hin1I	GRCGYC	1 cut(s)	1068
Hin1II	CATG	8 cut(s)	224, 350, 354, 579, 746, 829, 1016, 1427
Hin6I	GCGC	2 cut(s)	314, 1120
HinP1I	GCGC	2 cut(s)	314, 1120
HincII	GTYRAC	2 cut(s)	1027, 1344
HindII	GTYRAC	2 cut(s)	1027, 1344
HindIII	AAGCTT	2 cut(s)	736, 802
HinfI	GANTC	5 cut(s)	631, 670, 1257, 1384, 1447
HpaII	CCGG	2 cut(s)	1071, 1437
HphI	GGTGA	1 cut(s)	1445
Hpy166II	GTNNAC	6 cut(s)	46, 282, 678, 968, 1027, 1344
Hpy188I	TCNGA	5 cut(s)	121, 548, 961, 1136, 1412
Hpy188III	TCNNGA	4 cut(s)	130, 221, 246, 536
Hpy8I	GTNNAC	6 cut(s)	46, 282, 678, 968, 1027, 1344
Hpy99I	CGWCG	1 cut(s)	155
HpyAV	CCTTC	2 cut(s)	74, 1186
HpyCH4III	ACNGT	7 cut(s)	43, 295, 977, 985, 1329, 1348, 1477
HpyCH4IV	ACGT	1 cut(s)	171
HpyF10VI	GCNNNNNNNGC	6 cut(s)	446, 609, 698, 713, 758, 1316
HpyF3I	CTNAG	7 cut(s)	118, 417, 422, 857, 958, 1123, 1143
HpySE526I	ACGT	1 cut(s)	171
Hsp92I	GRCGYC	1 cut(s)	1068
Hsp92II	CATG	8 cut(s)	224, 350, 354, 579, 746, 829, 1016, 1427
HspAI	GCGC	2 cut(s)	314, 1120
KroI	GCCGGC	1 cut(s)	1070
KroNI	GCCGGC	1 cut(s)	1072
Kzo9I	GATC	2 cut(s)	406, 1270
LguI	GCTCTTC	1 cut(s)	439
LmnI	GCTCC	1 cut(s)	822
Lsp1109I	GCAGC	8 cut(s)	210, 223, 691, 713, 728, 1196, 1234, 1331
LweI	GCATC	5 cut(s)	427, 510, 520, 543, 636
MabI	ACCWGGT	1 cut(s)	1174
MaeI	CTAG	1 cut(s)	722
MaeII	ACGT	1 cut(s)	171
MaeIII	GTNAC	2 cut(s)	979, 1034
MalI	GATC	2 cut(s)	408, 1272
MboI	GATC	2 cut(s)	406, 1270
MboII	GAAGA	9 cut(s)	376, 456, 467, 539, 632, 842, 876, 1266, 1390
MflI	RGATCY	2 cut(s)	406, 1270
MhlI	GDGCHC	1 cut(s)	64
MluCI	AATT	7 cut(s)	399, 696, 726, 790, 1232, 1467, 1485
MlyI	GAGTC	1 cut(s)	679
MmeI	TCCRAC	1 cut(s)	1379
Mph1103I	ATGCAT	1 cut(s)	352
MroNI	GCCGGC	1 cut(s)	1070
MroXI	GAANNNNTTC	2 cut(s)	383, 635
MseI	TTAA	2 cut(s)	167, 1047
MslI	CAYNNNNRTG	6 cut(s)	219, 351, 378, 496, 644, 747
MspA1I	CMGCKG	2 cut(s)	704, 1322
MspI	CCGG	2 cut(s)	1071, 1437
MspR9I	CCNGG	5 cut(s)	434, 1052, 1176, 1275, 1389
Mva1269I	GAATGC	5 cut(s)	255, 373, 586, 889, 1074
MvaI	CCWGG	5 cut(s)	434, 1052, 1176, 1275, 1389
MvnI	CGCG	2 cut(s)	314, 1120
MwoI	GCNNNNNNNGC	6 cut(s)	446, 609, 698, 713, 758, 1316
NaeI	GCCGGC	1 cut(s)	1072
NdeI	CATATG	1 cut(s)	1291
NdeII	GATC	2 cut(s)	406, 1270
NgoMIV	GCCGGC	1 cut(s)	1070
NlaIII	CATG	8 cut(s)	224, 350, 354, 579, 746, 829, 1016, 1427
NlaIV	GGNNCC	2 cut(s)	666, 1272
NmeAIII	GCCGAG	3 cut(s)	158, 187, 693
NsiI	ATGCAT	1 cut(s)	352
NspI	RCATGY	1 cut(s)	354
NspV	TTCGAA	4 cut(s)	377, 453, 652, 942
PaeR7I	CTCGAG	1 cut(s)	536
PagI	TCATGA	1 cut(s)	220
PciSI	GCTCTTC	1 cut(s)	439
PctI	GAATGC	5 cut(s)	255, 373, 586, 889, 1074
PdiI	GCCGGC	1 cut(s)	1072
PdmI	GAANNNNTTC	2 cut(s)	383, 635
PfeI	GAWTC	4 cut(s)	631, 1257, 1384, 1447
PflMI	CCANNNNNTGG	1 cut(s)	1181
PfoI	TCCNGGA	2 cut(s)	432, 1273
PkrI	GCNGC	8 cut(s)	200, 213, 703, 706, 718, 1211, 1249, 1321
PleI	GAGTC	1 cut(s)	678
PpsI	GAGTC	1 cut(s)	678
Psp6I	CCWGG	5 cut(s)	432, 1050, 1174, 1273, 1387
PspGI	CCWGG	5 cut(s)	432, 1050, 1174, 1273, 1387
PspN4I	GGNNCC	2 cut(s)	666, 1272
PstI	CTGCAG	1 cut(s)	1321
PsuI	RGATCY	2 cut(s)	406, 1270
PvuII	CAGCTG	2 cut(s)	704, 1322
RsaI	GTAC	2 cut(s)	281, 1493
RsaNI	GTAC	2 cut(s)	280, 1492
RseI	CAYNNNNRTG	6 cut(s)	219, 351, 378, 496, 644, 747
SapI	GCTCTTC	1 cut(s)	439
SaqAI	TTAA	2 cut(s)	167, 1047
SatI	GCNGC	8 cut(s)	199, 212, 702, 705, 717, 1210, 1248, 1320
Sau3AI	GATC	2 cut(s)	406, 1270
SchI	GAGTC	1 cut(s)	679
ScrFI	CCNGG	5 cut(s)	434, 1052, 1176, 1275, 1389
SduI	GDGCHC	1 cut(s)	64
SexAI	ACCWGGT	1 cut(s)	1174
SfaNI	GCATC	5 cut(s)	427, 510, 520, 543, 636
SfcI	CTRYAG	1 cut(s)	1317
Sfr274I	CTCGAG	1 cut(s)	536
SfuI	TTCGAA	4 cut(s)	377, 453, 652, 942
SgrAI	CRCCGGYG	1 cut(s)	1436
SlaI	CTCGAG	1 cut(s)	536
SmiMI	CAYNNNNRTG	6 cut(s)	219, 351, 378, 496, 644, 747
SmlI	CTYRAG	1 cut(s)	536
SmoI	CTYRAG	1 cut(s)	536
Sse9I	AATT	7 cut(s)	399, 696, 726, 790, 1232, 1467, 1485
SsiI	CCGC	1 cut(s)	312
SspI	AATATT	1 cut(s)	265
SspMI	CTAG	1 cut(s)	722
StyD4I	CCNGG	5 cut(s)	432, 1050, 1174, 1273, 1387
TaaI	ACNGT	7 cut(s)	43, 295, 977, 985, 1329, 1348, 1477
TaiI	ACGT	1 cut(s)	174
TasI	AATT	7 cut(s)	399, 696, 726, 790, 1232, 1467, 1485
TatI	WGTACW	2 cut(s)	279, 1491
TfiI	GAWTC	4 cut(s)	631, 1257, 1384, 1447
Tru1I	TTAA	2 cut(s)	167, 1047
Tru9I	TTAA	2 cut(s)	167, 1047
TscAI	CASTG	2 cut(s)	298, 982
TseI	GCWGC	8 cut(s)	198, 211, 701, 704, 716, 1209, 1247, 1319
TspRI	CASTG	2 cut(s)	298, 982
Van91I	CCANNNNNTGG	1 cut(s)	1181
XagI	CCTNNNNNAGG	1 cut(s)	512
XapI	RAATTY	2 cut(s)	1467, 1485
XceI	RCATGY	1 cut(s)	354
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1395
XhoI	CTCGAG	1 cut(s)	536
XmiI	GTMKAC	1 cut(s)	677
XmnI	GAANNNNTTC	2 cut(s)	383, 635
XspI	CTAG	1 cut(s)	722
Zsp2I	ATGCAT	1 cut(s)	352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.