Prupe.7G100300_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0013091
Physical Location & Seq
Reverse (-)
13066388 .. 13069859
3472 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G100300.1

Sequence Viewer

Length: 2046 bp
ATGCCGAGGCAGAACAACGGCTTGGGTATGGACCTGCTGATCCCTGGCAAAATCAGAAAGCGAGGGTGCTCGTCGTCAGCTTCTTCGTCGTCTTCGATCATCCAAAACTACAGATTCAAGAGGGCGATACTGGTGGGCAAGAGGGGCCGATCCAGTACGCCCGTGCCCACATGGAAGCTCATGAGCTCCAGGTCACCTACCGCGTCGGCATTGCGCGCCATGGACTCCCCCAACTACGCCGCCTCCTCCCAGAACGGCGCCGGCAGGTCCAAGCAGCAAGCTCCAGTGTCTGCCAGGAAGCTCGCCGCCACGCTCTGGGAAATGAACGACATGCCGTCTCCGAGAGTGAGGGAAGGGTCGTCGGACGAGAGGAGGCTGAGGAAGATGGAGATTATGAATAGTAAGGCCAGAGAGAGAGAAAGGATCGCGAGATCGGCGCACTCGGGTTCTCTGCCTCCCCATCTCTCCGATCCGTCTCATAGTCCTGTTTCCGAGAGGACGGAGAGATCTGGAACTGGTAGTTTCCATCGAAGGACGCCCTCCATTTCACAGAGGCTCAGGCTCACAGACCACCATGCTGGAATGTTGGATTCTCATCGCAATGGCAGCTTAATGGAGGTTGAGACTAGATCTAGAGCCCAGACTCCTACTGCTTCCACTGTTGGAGTCAAGACTCATTTGAAGGATGTTAGCAATGCTTTGACCACGTCTAAAGAGCTACTGAAAATTATCAACCGCATTTGGGGTAATGAAGATCGGCCTTCCTCAAGCATGGCCCTCATCTCAGCCTTACATGCTGAGCTGGAGAGGGCTCGTTTACAGGTCAATCAGCTTATCCAAGAACAACGCGCAGACCAGAATGAGATCAATTATCTCATGAAGTGTTTTGCTGAAGAAAAGGCAGCTTGGAAAAGCAAAGAGCACAAAGTTGTTGAGGCTGCTATTGAGGCTGTTGCAGGTGAACTTGAGGTAGAGAGGAAACTGAGAAGAAGGTCTGAAAGCTTGAATAAGAAACTTGGGAAAGAACTGGCAGAGACAAAAGCCTCACTTGTTAAGGCGGTGAAAGAACTTGAGAGTGAGAAGAGAACTAGAGAGATAATGGAACAAGTATGTGATGAATTAGCCAGGGACATTGATGAAGATAAATCTGAAGCAGTGGAATTGAAGAGGGAGTCTTCAAAAGTTCGGGAAGATGTTGAGAAGGAAAGGGAGATGATGCAGTTTGCAGACGTGTTGCGTGAAGAGAGAGCTCAAGTGAAACTCTCAGAGGCAAAACATCAGCTTGAGGAGAAGAATGCAGCTGTTGATATATTGAGGAGTCAACTTGAAGCTTTTATGGGAAGTAAGAGAACCAAAGAAAAGGGACGTGGTTCTTCTCATCTGAATGATGAAGAAATTTCCGCGTATCTAAGCAGAGCTCATCTTGGTTCCCATCAGGATGATGAAAAAGATGAGGATGGAGGAGAAGTTGAAGATGGAATAGAATGTGAAGAGGATTCTGCTGAAAGTGATCTTCATTCCATAGAGTTAAGCATGGGCAACAACAACAGAAGCTACAACTTGATTCATGCTTCTGGAGCTGCTCGTGATCCAAGGTGGGCTGCATTTGATGTCGAAGAAGTCAAAGGGAGGAAGTCTACATCTGGGAAGCCACCAAGAAGAAGCACTTCTTTGCAAAGAAGCGTATCAGATGGAGTGGAATGGGGTATGCAAGCTGAAAAGCTCCAAAATTCAGGAGATGGGATAGATTGGGAGAGATTTCCTGAACTGGAGAGGCAAAGACAAGAGCAAGGAAAAGGTCGCGGAGATGAAATGCAAGGGTATAAATCATCAATGGGTCTTAGGGACCAAATGTTGTCTGGTTCTAGGCTTGGACCGGCTAGAGTTCATGCTAGTCCAACACGGCAATGGGGCCAGCCATGGCCTTCACGGGATCCTACCGGTACATTTCAAGATAGGCCTCCCAGTGCGCAAGGCAATGGTTCAAAGTCTAGGCTAGGGGAAGCTAGAGGCGAAGGCCAGAATGGCAGAAGGTCAAAACGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

682

Amino Acids

76.21

Weight (kDa)

9.34

Isoelectric Point (pI)

56.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013091)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11590 AT3G11590
fragaria_vesca FvH4_6g19640
malus_domestica MD12G1032300.v1.1 MD14G1032400.v1.1
prunus_persica Prupe.7G100300_v2.0.a1
pyrus_communis pycom12g02990 pycom14g02920
rosa_chinensis RchiOBHm_Chr3g0474981
rosa_laevigata RLG00000023874
rosa_multiflora Rmu_sc0003093.1_g000007
rosa_roxburghii Rroxscaffold_6G00406670
rosa_rugosa Rorug03G0145900
rosa_samantha Rh3AG195200 Rh3BG225300 Rh3CG220200 Rh3DG220700
rosa_wichuraiana Rw3G017780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 947
Acc16I TGCGCA 1 cut(s) 1971
Acc36I ACCTGC 3 cut(s) 42, 255, 947
AccB1I GGYRCC 1 cut(s) 257
AccB7I CCANNNNNTGG 1 cut(s) 315
AccI GTMKAC 1 cut(s) 1637
AccII CGCG 6 cut(s) 203, 216, 428, 849, 1403, 1803
AciI CCGC 7 cut(s) 201, 240, 306, 736, 1058, 1401, 1803
AclWI GGATC 7 cut(s) 34, 144, 431, 464, 1583, 1928, 1941
AcsI RAATTY 2 cut(s) 1395, 1729
AcuI CTGAAG 2 cut(s) 912, 1170
AcyI GRCGYC 2 cut(s) 258, 536
AfaI GTAC 2 cut(s) 157, 1945
AfiI CCNNNNNNNGG 2 cut(s) 315, 742
AflIII ACRYGT 1 cut(s) 1230
AgeI ACCGGT 1 cut(s) 1940
AgsI TTSAA 9 cut(s) 118, 682, 1006, 1165, 1179, 1328, 1472, 1952, 1986
AhdI GACNNNNNGTC 1 cut(s) 334
AjiI CACGTC 3 cut(s) 708, 1231, 1367
AjnI CCWGG 4 cut(s) 43, 188, 293, 1124
AjuI GAANNNNNNNTTGG 1 cut(s) 37
Alw21I GWGCWC 5 cut(s) 71, 188, 924, 1252, 1420
Alw26I GTCTC 4 cut(s) 342, 480, 617, 1028
AlwI GGATC 7 cut(s) 34, 144, 431, 464, 1583, 1928, 1941
AlwNI CAGNNNCTG 1 cut(s) 290
Ama87I CYCGRG 1 cut(s) 442
AoxI GGCC 8 cut(s) 145, 405, 758, 774, 1912, 1922, 1958, 2017
ApeKI GCWGC 7 cut(s) 274, 606, 902, 938, 1298, 1580, 1601
ApoI RAATTY 2 cut(s) 1395, 1729
AsiGI ACCGGT 1 cut(s) 1940
Asp700I GAANNNNTTC 1 cut(s) 1666
AspLEI GCGC 6 cut(s) 216, 218, 260, 439, 851, 1972
AspS9I GGNCC 7 cut(s) 31, 145, 267, 775, 1846, 1874, 1912
AsuHPI GGTGA 3 cut(s) 186, 971, 1072
AvaI CYCGRG 1 cut(s) 442
AvaII GGWCC 4 cut(s) 31, 267, 1846, 1874
BaeGI GKGCMC 1 cut(s) 168
BamHI GGATCC 1 cut(s) 1933
BanI GGYRCC 1 cut(s) 257
BanII GRGCYC 5 cut(s) 188, 640, 814, 1252, 1420
BauI CACGAG 1 cut(s) 1584
BbsI GAAGAC 2 cut(s) 84, 1167
Bbv12I GWGCWC 5 cut(s) 71, 188, 924, 1252, 1420
BbvCI CCTCAGC 1 cut(s) 377
BbvI GCAGC 7 cut(s) 286, 618, 914, 925, 1310, 1567, 1588
BccI CCATC 8 cut(s) 379, 468, 534, 1440, 1451, 1469, 1685, 1733
BceAI ACGGC 4 cut(s) 34, 271, 319, 1919
BciT130I CCWGG 4 cut(s) 45, 190, 295, 1126
BcoDI GTCTC 4 cut(s) 342, 480, 617, 1028
BfaI CTAG 9 cut(s) 627, 633, 1089, 1866, 1881, 1893, 1992, 1997, 2007
BfmI CTRYAG 1 cut(s) 109
BfoI RGCGCY 1 cut(s) 261
BfuAI ACCTGC 3 cut(s) 42, 255, 947
BglI GCCNNNNNGGC 1 cut(s) 2025
BglII AGATCT 2 cut(s) 506, 629
BisI GCNGC 9 cut(s) 240, 275, 306, 607, 903, 939, 1299, 1581, 1602
BlpI GCTNAGC 1 cut(s) 798
BlsI GCNGC 9 cut(s) 241, 276, 307, 608, 904, 940, 1300, 1582, 1603
Bme1390I CCNGG 4 cut(s) 45, 190, 295, 1126
Bme18I GGWCC 4 cut(s) 31, 267, 1846, 1874
BmeRI GACNNNNNGTC 1 cut(s) 334
BmeT110I CYCGRG 1 cut(s) 442
BmgBI CACGTC 3 cut(s) 708, 1231, 1367
BmgT120I GGNCC 7 cut(s) 31, 145, 267, 775, 1846, 1874, 1912
BmiI GGNNCC 6 cut(s) 146, 259, 1429, 1847, 1913, 1935
BmrFI CCNGG 4 cut(s) 45, 190, 295, 1126
BmrI ACTGGG 1 cut(s) 1959
BmsI GCATC 1 cut(s) 1206
BmuI ACTGGG 1 cut(s) 1959
BpiI GAAGAC 2 cut(s) 84, 1167
BpmI CTGGAG 5 cut(s) 172, 267, 824, 1596, 1790
Bpu10I CCTNAGC 2 cut(s) 377, 557
Bpu1102I GCTNAGC 1 cut(s) 798
BpuEI CTTGAG 5 cut(s) 751, 986, 1091, 1236, 1304
BsaBI GATNNNNATC 1 cut(s) 594
BsaHI GRCGYC 2 cut(s) 258, 536
BsaJI CCNNGG 6 cut(s) 5, 43, 219, 1125, 1592, 1919
BsaWI WCCGGW 1 cut(s) 1940
BsaXI ACNNNNNCTCC 4 cut(s) 227, 257, 1452, 1482
Bsc4I CCNNNNNNNGG 2 cut(s) 315, 742
Bse118I RCCGGY 3 cut(s) 260, 1876, 1940
Bse1I ACTGG 7 cut(s) 135, 153, 284, 520, 1032, 1773, 1965
Bse3DI GCAATG 5 cut(s) 209, 607, 700, 1913, 1984
Bse8I GATNNNNATC 1 cut(s) 594
BseBI CCWGG 4 cut(s) 45, 190, 295, 1126
BseDI CCNNGG 6 cut(s) 5, 43, 219, 1125, 1592, 1919
BseGI GGATG 4 cut(s) 99, 691, 1444, 1462
BseJI GATNNNNATC 1 cut(s) 594
BseLI CCNNNNNNNGG 2 cut(s) 315, 742
BseMI GCAATG 5 cut(s) 209, 607, 700, 1913, 1984
BseMII CTCAG 6 cut(s) 368, 571, 789, 798, 974, 1278
BseNI ACTGG 7 cut(s) 135, 153, 284, 520, 1032, 1773, 1965
BsePI GCGCGC 1 cut(s) 214
BseRI GAGGAG 5 cut(s) 235, 385, 1301, 1330, 1476
BseSI GKGCMC 1 cut(s) 168
BseXI GCAGC 7 cut(s) 286, 618, 914, 925, 1310, 1567, 1588
Bsh1236I CGCG 6 cut(s) 203, 216, 428, 849, 1403, 1803
BshFI GGCC 8 cut(s) 147, 407, 760, 776, 1914, 1924, 1960, 2019
BshNI GGYRCC 1 cut(s) 257
BshTI ACCGGT 1 cut(s) 1940
BsiHKAI GWGCWC 5 cut(s) 71, 188, 924, 1252, 1420
BsiHKCI CYCGRG 1 cut(s) 442
BsiSI CCGG 3 cut(s) 261, 1877, 1941
BslFI GGGAC 3 cut(s) 1142, 1377, 1859
BslI CCNNNNNNNGG 2 cut(s) 315, 742
BsmAI GTCTC 4 cut(s) 342, 480, 617, 1028
BsmBI CGTCTC 2 cut(s) 342, 480
BsmFI GGGAC 3 cut(s) 1142, 1377, 1859
BsmI GAATGC 1 cut(s) 1300
BsnI GGCC 8 cut(s) 147, 407, 760, 776, 1914, 1924, 1960, 2019
BsoBI CYCGRG 1 cut(s) 442
Bsp1286I GDGCHC 8 cut(s) 71, 168, 188, 640, 814, 924, 1252, 1420
Bsp1720I GCTNAGC 1 cut(s) 798
Bsp19I CCATGG 2 cut(s) 219, 1919
Bsp68I TCGCGA 1 cut(s) 428
BspACI CCGC 7 cut(s) 201, 240, 306, 736, 1058, 1401, 1803
BspANI GGCC 8 cut(s) 147, 407, 760, 776, 1914, 1924, 1960, 2019
BspCNI CTCAG 6 cut(s) 369, 570, 790, 797, 975, 1277
BspFNI CGCG 6 cut(s) 203, 216, 428, 849, 1403, 1803
BspHI TCATGA 2 cut(s) 180, 876
BspLI GGNNCC 6 cut(s) 146, 259, 1429, 1847, 1913, 1935
BspMI ACCTGC 3 cut(s) 42, 255, 947
BspPI GGATC 7 cut(s) 34, 144, 431, 464, 1583, 1928, 1941
BspT107I GGYRCC 1 cut(s) 257
BsrDI GCAATG 5 cut(s) 209, 607, 700, 1913, 1984
BsrFI RCCGGY 3 cut(s) 260, 1876, 1940
BsrI ACTGG 7 cut(s) 135, 153, 284, 520, 1032, 1773, 1965
BssAI RCCGGY 3 cut(s) 260, 1876, 1940
BssECI CCNNGG 6 cut(s) 5, 43, 219, 1125, 1592, 1919
BssHII GCGCGC 1 cut(s) 214
BssNI GRCGYC 2 cut(s) 258, 536
BssSI CACGAG 1 cut(s) 1584
BssT1I CCWWGG 3 cut(s) 219, 1592, 1919
Bst2BI CACGAG 1 cut(s) 1584
Bst2UI CCWGG 4 cut(s) 45, 190, 295, 1126
Bst4CI ACNGT 2 cut(s) 661, 2043
Bst6I CTCTTC 4 cut(s) 1076, 1160, 1236, 1485
BstACI GRCGYC 2 cut(s) 258, 536
BstC8I GCNNGC 6 cut(s) 216, 262, 279, 303, 1713, 1916
BstDEI CTNAG 8 cut(s) 377, 557, 784, 798, 983, 1264, 1409, 1841
BstDSI CCRYGG 2 cut(s) 219, 1919
BstEII GGTNACC 1 cut(s) 192
BstF5I GGATG 4 cut(s) 99, 691, 1444, 1462
BstFNI CGCG 6 cut(s) 203, 216, 428, 849, 1403, 1803
BstH2I RGCGCY 1 cut(s) 261
BstHHI GCGC 6 cut(s) 216, 218, 260, 439, 851, 1972
BstMAI GTCTC 4 cut(s) 342, 480, 617, 1028
BstMWI GCNNNNNNNGC 8 cut(s) 144, 215, 434, 606, 794, 947, 1577, 2025
BstNI CCWGG 4 cut(s) 45, 190, 295, 1126
BstNSI RCATGY 2 cut(s) 334, 797
BstPI GGTNACC 1 cut(s) 192
BstSCI CCNGG 4 cut(s) 43, 188, 293, 1124
BstSFI CTRYAG 1 cut(s) 109
BstSLI GKGCMC 1 cut(s) 168
BstUI CGCG 6 cut(s) 203, 216, 428, 849, 1403, 1803
BstV1I GCAGC 7 cut(s) 286, 618, 914, 925, 1310, 1567, 1588
BstV2I GAAGAC 2 cut(s) 84, 1167
BstX2I RGATCY 3 cut(s) 506, 629, 1933
BstXI CCANNNNNNTGG 1 cut(s) 578
BstYI RGATCY 3 cut(s) 506, 629, 1933
BsuRI GGCC 8 cut(s) 147, 407, 760, 776, 1914, 1924, 1960, 2019
BtgI CCRYGG 2 cut(s) 219, 1919
BtgZI GCGATG 1 cut(s) 581
BtrI CACGTC 3 cut(s) 708, 1231, 1367
BtsCI GGATG 4 cut(s) 99, 691, 1444, 1462
BtsI GCAGTG 1 cut(s) 1161
BtsIMutI CAGTG 4 cut(s) 291, 657, 1161, 1972
BtuMI TCGCGA 1 cut(s) 428
BveI ACCTGC 3 cut(s) 42, 255, 947
Cac8I GCNNGC 6 cut(s) 216, 262, 279, 303, 1713, 1916
CaiI CAGNNNCTG 1 cut(s) 290
CciI TCATGA 2 cut(s) 180, 876
CfoI GCGC 6 cut(s) 216, 218, 260, 439, 851, 1972
Cfr10I RCCGGY 3 cut(s) 260, 1876, 1940
Cfr13I GGNCC 7 cut(s) 31, 145, 267, 775, 1846, 1874, 1912
CseI GACGC 2 cut(s) 192, 544
Csp6I GTAC 2 cut(s) 156, 1944
CspAI ACCGGT 1 cut(s) 1940
CviQI GTAC 2 cut(s) 156, 1944
DdeI CTNAG 8 cut(s) 377, 557, 784, 798, 983, 1264, 1409, 1841
DinI GGCGCC 1 cut(s) 259
DriI GACNNNNNGTC 1 cut(s) 334
Eam1104I CTCTTC 4 cut(s) 1076, 1160, 1236, 1485
Eam1105I GACNNNNNGTC 1 cut(s) 334
EarI CTCTTC 4 cut(s) 1076, 1160, 1236, 1485
Ecl136II GAGCTC 3 cut(s) 186, 1250, 1418
Eco130I CCWWGG 3 cut(s) 219, 1592, 1919
Eco147I AGGCCT 1 cut(s) 1960
Eco24I GRGCYC 5 cut(s) 188, 640, 814, 1252, 1420
Eco47I GGWCC 4 cut(s) 31, 267, 1846, 1874
Eco53kI GAGCTC 3 cut(s) 186, 1250, 1418
Eco57I CTGAAG 2 cut(s) 912, 1170
Eco88I CYCGRG 1 cut(s) 442
Eco91I GGTNACC 1 cut(s) 192
EcoICRI GAGCTC 3 cut(s) 186, 1250, 1418
EcoO65I GGTNACC 1 cut(s) 192
EcoRII CCWGG 4 cut(s) 43, 188, 293, 1124
EcoT14I CCWWGG 3 cut(s) 219, 1592, 1919
EcoT38I GRGCYC 5 cut(s) 188, 640, 814, 1252, 1420
EgeI GGCGCC 1 cut(s) 259
EheI GGCGCC 1 cut(s) 259
ErhI CCWWGG 3 cut(s) 219, 1592, 1919
Esp3I CGTCTC 2 cut(s) 342, 480
FalI AAGNNNNNCTT 6 cut(s) 1032, 1064, 1651, 1683, 1654, 1686
FaqI GGGAC 3 cut(s) 1142, 1377, 1859
FblI GTMKAC 1 cut(s) 1637
Fnu4HI GCNGC 9 cut(s) 240, 275, 306, 607, 903, 939, 1299, 1581, 1602
FokI GGATG 4 cut(s) 86, 698, 1451, 1469
FriOI GRGCYC 5 cut(s) 188, 640, 814, 1252, 1420
Fsp4HI GCNGC 9 cut(s) 240, 275, 306, 607, 903, 939, 1299, 1581, 1602
FspBI CTAG 9 cut(s) 627, 633, 1089, 1866, 1881, 1893, 1992, 1997, 2007
FspI TGCGCA 1 cut(s) 1971
GlaI GCGC 6 cut(s) 215, 217, 259, 438, 850, 1971
GluI GCNGC 9 cut(s) 240, 275, 306, 607, 903, 939, 1299, 1581, 1602
GsuI CTGGAG 5 cut(s) 172, 267, 824, 1596, 1790
HaeII RGCGCY 1 cut(s) 261
HaeIII GGCC 8 cut(s) 147, 407, 760, 776, 1914, 1924, 1960, 2019
HapII CCGG 3 cut(s) 261, 1877, 1941
HgaI GACGC 2 cut(s) 192, 544
HhaI GCGC 6 cut(s) 216, 218, 260, 439, 851, 1972
Hin1I GRCGYC 2 cut(s) 258, 536
Hin6I GCGC 6 cut(s) 214, 216, 258, 437, 849, 1970
HinP1I GCGC 6 cut(s) 214, 216, 258, 437, 849, 1970
HincII GTYRAC 1 cut(s) 1322
HindII GTYRAC 1 cut(s) 1322
HindIII AAGCTT 2 cut(s) 1000, 1329
HpaII CCGG 3 cut(s) 261, 1877, 1941
HphI GGTGA 3 cut(s) 186, 971, 1072
Hpy166II GTNNAC 4 cut(s) 818, 962, 1322, 1638
Hpy8I GTNNAC 4 cut(s) 818, 962, 1322, 1638
Hpy99I CGWCG 4 cut(s) 76, 91, 208, 364
HpyAV CCTTC 9 cut(s) 347, 525, 676, 771, 984, 1195, 1935, 2009, 2025
HpyCH4III ACNGT 2 cut(s) 661, 2043
HpyCH4IV ACGT 3 cut(s) 707, 1230, 1366
HpyCH4V TGCA 8 cut(s) 956, 1219, 1226, 1298, 1604, 1675, 1711, 1816
HpyF10VI GCNNNNNNNGC 8 cut(s) 144, 215, 434, 606, 794, 947, 1577, 2025
HpyF3I CTNAG 8 cut(s) 377, 557, 784, 798, 983, 1264, 1409, 1841
HpySE526I ACGT 3 cut(s) 707, 1230, 1366
Hsp92I GRCGYC 2 cut(s) 258, 536
HspAI GCGC 6 cut(s) 214, 216, 258, 437, 849, 1970
KasI GGCGCC 1 cut(s) 257
KroI GCCGGC 1 cut(s) 260
KroNI GCCGGC 1 cut(s) 262
LmnI GCTCC 4 cut(s) 191, 286, 1577, 1728
Lsp1109I GCAGC 7 cut(s) 286, 618, 914, 925, 1310, 1567, 1588
LweI GCATC 1 cut(s) 1206
MaeI CTAG 9 cut(s) 627, 633, 1089, 1866, 1881, 1893, 1992, 1997, 2007
MaeII ACGT 3 cut(s) 707, 1230, 1366
MaeIII GTNAC 1 cut(s) 192
MflI RGATCY 3 cut(s) 506, 629, 1933
MhlI GDGCHC 8 cut(s) 71, 168, 188, 640, 814, 924, 1252, 1420
MluCI AATT 6 cut(s) 726, 868, 1118, 1160, 1395, 1729
Mly113I GGCGCC 1 cut(s) 258
MlyI GAGTC 6 cut(s) 218, 637, 667, 675, 1181, 1327
MmeI TCCRAC 4 cut(s) 342, 567, 643, 1922
MroNI GCCGGC 1 cut(s) 260
MroXI GAANNNNTTC 1 cut(s) 1666
MseI TTAA 3 cut(s) 611, 1053, 1529
MslI CAYNNNNRTG 4 cut(s) 600, 1383, 1437, 1906
MspA1I CMGCKG 1 cut(s) 1301
MspI CCGG 3 cut(s) 261, 1877, 1941
MspR9I CCNGG 4 cut(s) 45, 190, 295, 1126
Mva1269I GAATGC 1 cut(s) 1300
MvaI CCWGG 4 cut(s) 45, 190, 295, 1126
MvnI CGCG 6 cut(s) 203, 216, 428, 849, 1403, 1803
MwoI GCNNNNNNNGC 8 cut(s) 144, 215, 434, 606, 794, 947, 1577, 2025
NaeI GCCGGC 1 cut(s) 262
NarI GGCGCC 1 cut(s) 258
NcoI CCATGG 2 cut(s) 219, 1919
NgoMIV GCCGGC 1 cut(s) 260
NlaIV GGNNCC 6 cut(s) 146, 259, 1429, 1847, 1913, 1935
NmeAIII GCCGAG 1 cut(s) 30
NmuCI GTSAC 1 cut(s) 192
NruI TCGCGA 1 cut(s) 428
NsbI TGCGCA 1 cut(s) 1971
NspI RCATGY 2 cut(s) 334, 797
PagI TCATGA 2 cut(s) 180, 876
PaqCI CACCTGC 1 cut(s) 947
PauI GCGCGC 1 cut(s) 214
PceI AGGCCT 1 cut(s) 1960
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PctI GAATGC 1 cut(s) 1300
PdiI GCCGGC 1 cut(s) 262
PdmI GAANNNNTTC 1 cut(s) 1666
PfeI GAWTC 4 cut(s) 114, 590, 1496, 1564
PflFI GACNNNGTC 1 cut(s) 706
PflMI CCANNNNNTGG 1 cut(s) 315
PinAI ACCGGT 1 cut(s) 1940
PkrI GCNGC 9 cut(s) 241, 276, 307, 608, 904, 940, 1300, 1582, 1603
PleI GAGTC 6 cut(s) 218, 637, 667, 674, 1180, 1326
PluTI GGCGCC 1 cut(s) 261
PpsI GAGTC 6 cut(s) 218, 637, 667, 674, 1180, 1326
Psp124BI GAGCTC 3 cut(s) 188, 1252, 1420
Psp6I CCWGG 4 cut(s) 43, 188, 293, 1124
PspEI GGTNACC 1 cut(s) 192
PspGI CCWGG 4 cut(s) 43, 188, 293, 1124
PspN4I GGNNCC 6 cut(s) 146, 259, 1429, 1847, 1913, 1935
PspPI GGNCC 7 cut(s) 31, 145, 267, 775, 1846, 1874, 1912
PstNI CAGNNNCTG 1 cut(s) 290
PsuI RGATCY 3 cut(s) 506, 629, 1933
PsyI GACNNNGTC 1 cut(s) 706
PteI GCGCGC 1 cut(s) 214
PvuII CAGCTG 1 cut(s) 1301
RruI TCGCGA 1 cut(s) 428
RsaI GTAC 2 cut(s) 157, 1945
RsaNI GTAC 2 cut(s) 156, 1944
RseI CAYNNNNRTG 4 cut(s) 600, 1383, 1437, 1906
SacI GAGCTC 3 cut(s) 188, 1252, 1420
SaqAI TTAA 3 cut(s) 611, 1053, 1529
SatI GCNGC 9 cut(s) 240, 275, 306, 607, 903, 939, 1299, 1581, 1602
Sau96I GGNCC 7 cut(s) 31, 145, 267, 775, 1846, 1874, 1912
SchI GAGTC 6 cut(s) 218, 637, 667, 675, 1181, 1327
ScrFI CCNGG 4 cut(s) 45, 190, 295, 1126
SduI GDGCHC 8 cut(s) 71, 168, 188, 640, 814, 924, 1252, 1420
SfaNI GCATC 1 cut(s) 1206
SfcI CTRYAG 1 cut(s) 109
SfoI GGCGCC 1 cut(s) 259
SinI GGWCC 4 cut(s) 31, 267, 1846, 1874
SmiMI CAYNNNNRTG 4 cut(s) 600, 1383, 1437, 1906
SmlI CTYRAG 5 cut(s) 766, 965, 1070, 1251, 1283
SmoI CTYRAG 5 cut(s) 766, 965, 1070, 1251, 1283
Sse9I AATT 6 cut(s) 726, 868, 1118, 1160, 1395, 1729
SseBI AGGCCT 1 cut(s) 1960
SsiI CCGC 7 cut(s) 201, 240, 306, 736, 1058, 1401, 1803
SspDI GGCGCC 1 cut(s) 257
SspMI CTAG 9 cut(s) 627, 633, 1089, 1866, 1881, 1893, 1992, 1997, 2007
SstI GAGCTC 3 cut(s) 188, 1252, 1420
StuI AGGCCT 1 cut(s) 1960
StyD4I CCNGG 4 cut(s) 43, 188, 293, 1124
StyI CCWWGG 3 cut(s) 219, 1592, 1919
TaaI ACNGT 2 cut(s) 661, 2043
TaiI ACGT 3 cut(s) 710, 1233, 1369
TaqI TCGA 3 cut(s) 95, 529, 1614
TasI AATT 6 cut(s) 726, 868, 1118, 1160, 1395, 1729
TauI GCSGC 2 cut(s) 242, 308
TfiI GAWTC 4 cut(s) 114, 590, 1496, 1564
Tru1I TTAA 3 cut(s) 611, 1053, 1529
Tru9I TTAA 3 cut(s) 611, 1053, 1529
TscAI CASTG 4 cut(s) 291, 664, 1161, 1972
TseFI GTSAC 1 cut(s) 192
TseI GCWGC 7 cut(s) 274, 606, 902, 938, 1298, 1580, 1601
Tsp45I GTSAC 1 cut(s) 192
TspGWI ACGGA 2 cut(s) 462, 515
TspRI CASTG 4 cut(s) 291, 664, 1161, 1972
Tth111I GACNNNGTC 1 cut(s) 706
Van91I CCANNNNNTGG 1 cut(s) 315
VpaK11BI GGWCC 4 cut(s) 31, 267, 1846, 1874
XapI RAATTY 2 cut(s) 1395, 1729
XbaI TCTAGA 1 cut(s) 632
XceI RCATGY 2 cut(s) 334, 797
XcmI CCANNNNNNNNNTGG 2 cut(s) 1856, 1905
XmiI GTMKAC 1 cut(s) 1637
XmnI GAANNNNTTC 1 cut(s) 1666
XspI CTAG 9 cut(s) 627, 633, 1089, 1866, 1881, 1893, 1992, 1997, 2007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.