RchiOBHm_Chr3g0474981

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0013091
Physical Location & Seq
Forward (+)
20774643 .. 20778004
3362 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44052

Sequence Viewer

Length: 2058 bp
ATGCCGAGGCGCCACAACAACGACATGGACCTGATGATCCCCGGGAAGATCAGAAAGCGAGGCTGCTCGTCGTCGGCTTCGTCTTCGTCGTCGATCATCCAGAACTACAGATTCAAGCGGGCGATTCTGGTCGGGAAGAGGGGCGGATCCACTACGCCCGTGCCTACCTGGAAGCTCATGGGATCCAGGTCCCCCGCGTCCGCATTGCGGGGGGCCATGGAGTCTCCCAAGCACGCGCCGTCGCAGAGCGGCGGCGGCGGAGTTTCGAAGGGGAAACAGTCGCCGAGGCCTCCGGTGTCGGCGAGGAAGCTGGCGGCGACGCTTTGGGAAATGAACGACGTGCCGTCGCCGAGAGTGAAGGAAGAGGTGGATGAGCGGAGGATGAGGAAGGAGATTAGGGCCAGAGAGAAAGAGAGGGTTGCTCGGTCTCTGCGCTCGGGTTCTCTGCCTCCTCATCTCTCCGATCCGTCGCACAGTCCCGTTTCAGAGAGGATGGATCGATCTGGAACAGGTAGTTTGCACAGAAGGTCATCCTCTATTTCACAGAGGCTCAGGCTTACAGATCAACATTCTGGAATATTGGATTCTCATGGAAATGGCAGCCTAATGGAGGTTGAGTCTCGATCAAGAGCCCAGACTCCGACTAGATCGAGAGCTCAGACTCCTAGTGCTTCAACTGTTGGAATCAAGCCACGTTTGAAGGATGTTAGTAATGCTCTGACAACGTCTAAAGAGCTACTGAAAATTATACACCGCATTTGGGGTAATGAAGATCAGCCTTCATCTAGCATGGCCCTTATCTCAGCCTTACATGCTGAGCTCGAGAGGGCTCGTTTGCTGGTGAATCAGCATATCCACGAACAGCGCTCAGAGCAGAATGAGATCAGCTATCTCATGAAGTGTTTTGCTGAAGAAAAGGCAGCTTGGAAAAGCAAGGAGCACAAAGTAGTTGAGGCTGCCATCGAGTCTGTTGCAGAAGAACTTGAGGTGGAGAGAAAACTGAGAAGGAGGCTTGAAAGCTTGAACAAGAAACTCGGGAAAGAACTGGCAGAGACAAAAGCATCTCTCGTTAAGGCAGTCAAAGAACTTGAGAGTGAGAAGAGAGCAAGAGAGATCATGGAACAAGTGTGTGATGAATTAGCCAGGGATATTAATGAAGATAAACTTGAAGCAGAGGAACTGAAGTGGGAGTCTGCAAAAGTTCATGAAGAGATCGAAAAGGAAAGGGAGATGATGCAGTTCTCTGATGTGCTGCGTGAGGGGAGAGCTCAAGAGAAACTCTCAGAGGCAAAATATCAGCTTGAGGAGAAGAATGCTGCTGTTGATATGTTGAGGAGTCAACTTGAAGCCTTTATGGGAAGTAAGAGAACAAAAGAAAAAGGACGCGGTTCTGCTCATCTGAAAGATGAAGATATTGCAGCCTATCTAAGTAGAACTTGCCTTGGTTCCCATCAGGGTGAAGAAAAAGATGAGGATGGAGGAGAAGTTGAAGATGGAGTAGAATGTGAAGAGGATTCTGCTGAAAGTGATTTGCATTCCATAGAATTAAGTATGGGCAACAATAACAAAAGCTATAACTGGAGTCATGCTTCTGTAGCTGCTCGGGATCCAAGATGGGCTCCAAATGATGACGAAGAAATCAAAGGGAGGAAGTCCATGTCAGGGAAGCCACCAAGAAAAAGCACTTCTTTGCAAAGGAGTATATCAGATGGATTGGAATGGGGCATGCAGACTGAAAGGCTCCAAAATTCAGGAGATAGGGTAGATTGGGAGAGCTTTCCCGACCTGGAGAGGCAAATGCAAGGAAAGGGTTGTGGAGACGAAATGCAAGGGTATAAATCATCGAAGGGTCTTAGGGACCAAATGTTATCTGGCTCTAGGTTTGGATCTGCTAGAGTTCATGCTAGTCCAACACGGCAGTGGGGGCAGCCGTGGCCTTCACGAGATCCTACTAGTGCAGTTCACGATAGGCCTCCATCTGTCCATGGCAGTGGTTCAAAGTCAAGACTAGCAGAACTAAGAGGTGAAGGCCAGAATGGCAGAAGGTCCAAACGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

685

Amino Acids

76.72

Weight (kDa)

9.22

Isoelectric Point (pI)

58.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013091)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11590 AT3G11590
fragaria_vesca FvH4_6g19640
malus_domestica MD12G1032300.v1.1 MD14G1032400.v1.1
prunus_persica Prupe.7G100300_v2.0.a1
pyrus_communis pycom12g02990 pycom14g02920
rosa_chinensis RchiOBHm_Chr3g0474981
rosa_laevigata RLG00000023874
rosa_multiflora Rmu_sc0003093.1_g000007
rosa_roxburghii Rroxscaffold_6G00406670
rosa_rugosa Rorug03G0145900
rosa_samantha Rh3AG195200 Rh3BG225300 Rh3CG220200 Rh3DG220700
rosa_wichuraiana Rw3G017780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 9
AccBSI CCGCTC 2 cut(s) 249, 376
AccII CGCG 3 cut(s) 197, 236, 1386
AcsI RAATTY 1 cut(s) 1747
AcuI CTGAAG 2 cut(s) 930, 1202
AcyI GRCGYC 1 cut(s) 10
AfeI AGCGCT 1 cut(s) 866
AfiI CCNNNNNNNGG 4 cut(s) 207, 610, 760, 1662
AgsI TTSAA 9 cut(s) 115, 675, 700, 1016, 1024, 1169, 1346, 1490, 1998
AhdI GACNNNNNGTC 1 cut(s) 343
AhlI ACTAGT 1 cut(s) 1952
AjiI CACGTC 1 cut(s) 340
AjnI CCWGG 4 cut(s) 167, 185, 1142, 1785
AleI CACNNNNGTG 1 cut(s) 1918
Alw21I GWGCWC 4 cut(s) 658, 822, 942, 1270
Alw26I GTCTC 5 cut(s) 228, 432, 624, 1046, 1812
Ama87I CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
Aor51HI AGCGCT 1 cut(s) 866
AoxI GGCC 7 cut(s) 213, 287, 399, 792, 1934, 1970, 2029
ApeKI GCWGC 9 cut(s) 63, 600, 920, 956, 1252, 1316, 1418, 1598, 1927
ApoI RAATTY 1 cut(s) 1747
AseI ATTAAT 1 cut(s) 1152
AspLEI GCGC 4 cut(s) 12, 238, 435, 867
AspS9I GGNCC 7 cut(s) 28, 189, 213, 399, 793, 1858, 2046
AsuC2I CCSGG 2 cut(s) 42, 43
AsuHPI GGTGA 3 cut(s) 853, 1469, 2036
AsuII TTCGAA 1 cut(s) 266
AvaI CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
AvaII GGWCC 4 cut(s) 28, 189, 1858, 2046
BamHI GGATCC 3 cut(s) 146, 182, 1606
BanI GGYRCC 1 cut(s) 9
BanII GRGCYC 6 cut(s) 634, 658, 822, 832, 1270, 1621
BauI CACGAG 1 cut(s) 1941
BbsI GAAGAC 1 cut(s) 75
Bbv12I GWGCWC 4 cut(s) 658, 822, 942, 1270
BbvI GCAGC 9 cut(s) 50, 612, 932, 943, 1239, 1303, 1430, 1585, 1939
BccI CCATC 8 cut(s) 487, 968, 1458, 1469, 1487, 1608, 1703, 1984
BceAI ACGGC 4 cut(s) 223, 328, 1915, 1931
BcgI CGANNNNNNTGC 2 cut(s) 953, 987
BciT130I CCWGG 4 cut(s) 169, 187, 1144, 1787
BcnI CCSGG 2 cut(s) 42, 43
BcoDI GTCTC 5 cut(s) 228, 432, 624, 1046, 1812
BcuI ACTAGT 1 cut(s) 1952
BfaI CTAG 8 cut(s) 645, 666, 786, 1878, 1893, 1905, 1953, 2009
BfmI CTRYAG 2 cut(s) 106, 1593
BfoI RGCGCY 2 cut(s) 13, 868
BglI GCCNNNNNGGC 1 cut(s) 2037
BlpI GCTNAGC 1 cut(s) 816
Bme1390I CCNGG 6 cut(s) 42, 43, 169, 187, 1144, 1787
Bme18I GGWCC 4 cut(s) 28, 189, 1858, 2046
BmeRI GACNNNNNGTC 1 cut(s) 343
BmeT110I CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
BmgBI CACGTC 1 cut(s) 340
BmgT120I GGNCC 7 cut(s) 28, 189, 213, 399, 793, 1858, 2046
BmrFI CCNGG 6 cut(s) 42, 43, 169, 187, 1144, 1787
BmsI GCATC 2 cut(s) 1070, 1224
BpiI GAAGAC 1 cut(s) 75
BplI GAGNNNNNCTC 4 cut(s) 406, 438, 1265, 1297
BpmI CTGGAG 2 cut(s) 1600, 1808
Bpu10I CCTNAGC 1 cut(s) 551
Bpu1102I GCTNAGC 1 cut(s) 816
Bpu14I TTCGAA 1 cut(s) 266
BpuEI CTTGAG 4 cut(s) 1004, 1109, 1254, 1322
BpuMI CCSGG 2 cut(s) 42, 43
Bsa29I ATCGAT 1 cut(s) 499
BsaHI GRCGYC 1 cut(s) 10
BsaI GGTCTC 1 cut(s) 432
BsaJI CCNNGG 9 cut(s) 5, 40, 41, 216, 284, 1143, 1441, 1931, 1984
BsaWI WCCGGW 1 cut(s) 292
BsaXI ACNNNNNCTCC 6 cut(s) 602, 632, 1470, 1500, 1746, 1776
Bsc4I CCNNNNNNNGG 4 cut(s) 207, 610, 760, 1662
Bse1I ACTGG 2 cut(s) 1050, 1583
Bse3DI GCAATG 1 cut(s) 203
BseBI CCWGG 4 cut(s) 169, 187, 1144, 1787
BseCI ATCGAT 1 cut(s) 499
BseDI CCNNGG 9 cut(s) 5, 40, 41, 216, 284, 1143, 1441, 1931, 1984
BseGI GGATG 7 cut(s) 96, 376, 387, 498, 530, 709, 1480
BseLI CCNNNNNNNGG 4 cut(s) 207, 610, 760, 1662
BseMI GCAATG 1 cut(s) 203
BseMII CTCAG 7 cut(s) 565, 671, 807, 816, 882, 992, 1296
BseNI ACTGG 2 cut(s) 1050, 1583
BseRI GAGGAG 4 cut(s) 441, 1319, 1348, 1494
BseXI GCAGC 9 cut(s) 50, 612, 932, 943, 1239, 1303, 1430, 1585, 1939
BsgI GTGCAG 1 cut(s) 1977
Bsh1236I CGCG 3 cut(s) 197, 236, 1386
BshFI GGCC 7 cut(s) 215, 289, 401, 794, 1936, 1972, 2031
BshNI GGYRCC 1 cut(s) 9
BshVI ATCGAT 1 cut(s) 499
BsiHKAI GWGCWC 4 cut(s) 658, 822, 942, 1270
BsiHKCI CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
BsiSI CCGG 2 cut(s) 42, 293
BslFI GGGAC 3 cut(s) 175, 462, 1871
BslI CCNNNNNNNGG 4 cut(s) 207, 610, 760, 1662
BsmAI GTCTC 5 cut(s) 228, 432, 624, 1046, 1812
BsmBI CGTCTC 1 cut(s) 1812
BsmFI GGGAC 3 cut(s) 175, 462, 1871
BsmI GAATGC 2 cut(s) 1318, 1534
BsnI GGCC 7 cut(s) 215, 289, 401, 794, 1936, 1972, 2031
Bso31I GGTCTC 1 cut(s) 432
BsoBI CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
Bsp119I TTCGAA 1 cut(s) 266
Bsp1286I GDGCHC 7 cut(s) 634, 658, 822, 832, 942, 1270, 1621
Bsp1720I GCTNAGC 1 cut(s) 816
Bsp19I CCATGG 2 cut(s) 216, 1984
BspANI GGCC 7 cut(s) 215, 289, 401, 794, 1936, 1972, 2031
BspCNI CTCAG 7 cut(s) 564, 670, 808, 815, 881, 993, 1295
BspDI ATCGAT 1 cut(s) 499
BspFNI CGCG 3 cut(s) 197, 236, 1386
BspHI TCATGA 2 cut(s) 894, 1204
BspT104I TTCGAA 1 cut(s) 266
BspT107I GGYRCC 1 cut(s) 9
BspTNI GGTCTC 1 cut(s) 432
BsrBI CCGCTC 2 cut(s) 249, 376
BsrDI GCAATG 1 cut(s) 203
BsrI ACTGG 2 cut(s) 1050, 1583
BssECI CCNNGG 9 cut(s) 5, 40, 41, 216, 284, 1143, 1441, 1931, 1984
BssNI GRCGYC 1 cut(s) 10
BssSI CACGAG 1 cut(s) 1941
BssT1I CCWWGG 3 cut(s) 216, 1441, 1984
Bst2BI CACGAG 1 cut(s) 1941
Bst2UI CCWGG 4 cut(s) 169, 187, 1144, 1787
Bst4CI ACNGT 4 cut(s) 279, 476, 679, 2055
Bst6I CTCTTC 5 cut(s) 131, 357, 1094, 1203, 1503
BstACI GRCGYC 1 cut(s) 10
BstBI TTCGAA 1 cut(s) 266
BstC8I GCNNGC 4 cut(s) 120, 234, 312, 1727
BstDSI CCRYGG 3 cut(s) 216, 1931, 1984
BstENI CCTNNNNNAGG 1 cut(s) 608
BstF5I GGATG 7 cut(s) 96, 376, 387, 498, 530, 709, 1480
BstFNI CGCG 3 cut(s) 197, 236, 1386
BstH2I RGCGCY 2 cut(s) 13, 868
BstHHI GCGC 4 cut(s) 12, 238, 435, 867
BstMAI GTCTC 5 cut(s) 228, 432, 624, 1046, 1812
BstMWI GCNNNNNNNGC 7 cut(s) 255, 812, 871, 1595, 1924, 1933, 2037
BstNI CCWGG 4 cut(s) 169, 187, 1144, 1787
BstNSI RCATGY 2 cut(s) 815, 1729
BstSCI CCNGG 6 cut(s) 40, 41, 167, 185, 1142, 1785
BstSFI CTRYAG 2 cut(s) 106, 1593
BstUI CGCG 3 cut(s) 197, 236, 1386
BstV1I GCAGC 9 cut(s) 50, 612, 932, 943, 1239, 1303, 1430, 1585, 1939
BstV2I GAAGAC 1 cut(s) 75
BstX2I RGATCY 5 cut(s) 146, 182, 1606, 1886, 1945
BstXI CCANNNNNNTGG 1 cut(s) 1991
BstYI RGATCY 5 cut(s) 146, 182, 1606, 1886, 1945
Bsu15I ATCGAT 1 cut(s) 499
BsuRI GGCC 7 cut(s) 215, 289, 401, 794, 1936, 1972, 2031
BsuTUI ATCGAT 1 cut(s) 499
BtgI CCRYGG 3 cut(s) 216, 1931, 1984
BtrI CACGTC 1 cut(s) 340
BtsCI GGATG 7 cut(s) 96, 376, 387, 498, 530, 709, 1480
BtsI GCAGTG 2 cut(s) 1925, 1996
BtsIMutI CAGTG 2 cut(s) 1925, 1996
Cac8I GCNNGC 4 cut(s) 120, 234, 312, 1727
CciI TCATGA 2 cut(s) 894, 1204
CfoI GCGC 4 cut(s) 12, 238, 435, 867
Cfr13I GGNCC 7 cut(s) 28, 189, 213, 399, 793, 1858, 2046
Cfr9I CCCGGG 1 cut(s) 41
ClaI ATCGAT 1 cut(s) 499
CseI GACGC 3 cut(s) 186, 328, 1392
DinI GGCGCC 1 cut(s) 11
DriI GACNNNNNGTC 1 cut(s) 343
Eam1104I CTCTTC 5 cut(s) 131, 357, 1094, 1203, 1503
Eam1105I GACNNNNNGTC 1 cut(s) 343
EarI CTCTTC 5 cut(s) 131, 357, 1094, 1203, 1503
EciI GGCGGA 2 cut(s) 159, 273
Ecl136II GAGCTC 3 cut(s) 656, 820, 1268
Eco130I CCWWGG 3 cut(s) 216, 1441, 1984
Eco147I AGGCCT 2 cut(s) 289, 1972
Eco24I GRGCYC 6 cut(s) 634, 658, 822, 832, 1270, 1621
Eco31I GGTCTC 1 cut(s) 432
Eco47I GGWCC 4 cut(s) 28, 189, 1858, 2046
Eco47III AGCGCT 1 cut(s) 866
Eco53kI GAGCTC 3 cut(s) 656, 820, 1268
Eco57I CTGAAG 2 cut(s) 930, 1202
Eco88I CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
EcoICRI GAGCTC 3 cut(s) 656, 820, 1268
EcoNI CCTNNNNNAGG 1 cut(s) 608
EcoO109I RGGNCCY 1 cut(s) 189
EcoRII CCWGG 4 cut(s) 167, 185, 1142, 1785
EcoT14I CCWWGG 3 cut(s) 216, 1441, 1984
EcoT38I GRGCYC 6 cut(s) 634, 658, 822, 832, 1270, 1621
EgeI GGCGCC 1 cut(s) 11
EheI GGCGCC 1 cut(s) 11
ErhI CCWWGG 3 cut(s) 216, 1441, 1984
Esp3I CGTCTC 1 cut(s) 1812
FalI AAGNNNNNCTT 6 cut(s) 1149, 1181, 1420, 1452, 1672, 1704
FaqI GGGAC 3 cut(s) 175, 462, 1871
FauI CCCGC 3 cut(s) 111, 201, 202
FokI GGATG 7 cut(s) 83, 383, 394, 505, 517, 716, 1487
FriOI GRGCYC 6 cut(s) 634, 658, 822, 832, 1270, 1621
FspBI CTAG 8 cut(s) 645, 666, 786, 1878, 1893, 1905, 1953, 2009
GlaI GCGC 4 cut(s) 11, 237, 434, 866
GsuI CTGGAG 2 cut(s) 1600, 1808
HaeII RGCGCY 2 cut(s) 13, 868
HaeIII GGCC 7 cut(s) 215, 289, 401, 794, 1936, 1972, 2031
HapII CCGG 2 cut(s) 42, 293
HgaI GACGC 3 cut(s) 186, 328, 1392
HhaI GCGC 4 cut(s) 12, 238, 435, 867
Hin1I GRCGYC 1 cut(s) 10
Hin6I GCGC 4 cut(s) 10, 236, 433, 865
HinP1I GCGC 4 cut(s) 10, 236, 433, 865
HincII GTYRAC 1 cut(s) 1340
HindII GTYRAC 1 cut(s) 1340
HindIII AAGCTT 1 cut(s) 1018
HpaII CCGG 2 cut(s) 42, 293
HphI GGTGA 3 cut(s) 853, 1469, 2036
Hpy166II GTNNAC 2 cut(s) 1340, 1963
Hpy8I GTNNAC 2 cut(s) 1340, 1963
Hpy99I CGWCG 9 cut(s) 73, 76, 91, 94, 244, 322, 341, 349, 472
HpyCH4III ACNGT 4 cut(s) 279, 476, 679, 2055
HpyCH4IV ACGT 3 cut(s) 339, 694, 725
HpyF10VI GCNNNNNNNGC 7 cut(s) 255, 812, 871, 1595, 1924, 1933, 2037
HpySE526I ACGT 3 cut(s) 339, 694, 725
Hsp92I GRCGYC 1 cut(s) 10
HspAI GCGC 4 cut(s) 10, 236, 433, 865
KasI GGCGCC 1 cut(s) 9
LmnI GCTCC 3 cut(s) 937, 1624, 1746
Lsp1109I GCAGC 9 cut(s) 50, 612, 932, 943, 1239, 1303, 1430, 1585, 1939
LweI GCATC 2 cut(s) 1070, 1224
MaeI CTAG 8 cut(s) 645, 666, 786, 1878, 1893, 1905, 1953, 2009
MaeII ACGT 3 cut(s) 339, 694, 725
MbiI CCGCTC 2 cut(s) 249, 376
MflI RGATCY 5 cut(s) 146, 182, 1606, 1886, 1945
MhlI GDGCHC 7 cut(s) 634, 658, 822, 832, 942, 1270, 1621
MluCI AATT 4 cut(s) 744, 1136, 1544, 1747
Mly113I GGCGCC 1 cut(s) 10
MlyI GAGTC 8 cut(s) 230, 626, 631, 655, 974, 1199, 1345, 1591
MmeI TCCRAC 3 cut(s) 661, 665, 1934
MseI TTAA 3 cut(s) 1071, 1152, 1547
MslI CAYNNNNRTG 4 cut(s) 594, 1455, 1918, 1989
MspI CCGG 2 cut(s) 42, 293
MspR9I CCNGG 6 cut(s) 42, 43, 169, 187, 1144, 1787
Mva1269I GAATGC 2 cut(s) 1318, 1534
MvaI CCWGG 4 cut(s) 169, 187, 1144, 1787
MvnI CGCG 3 cut(s) 197, 236, 1386
MwoI GCNNNNNNNGC 7 cut(s) 255, 812, 871, 1595, 1924, 1933, 2037
NarI GGCGCC 1 cut(s) 10
NciI CCSGG 2 cut(s) 42, 43
NcoI CCATGG 2 cut(s) 216, 1984
NmeAIII GCCGAG 3 cut(s) 30, 309, 375
NspI RCATGY 2 cut(s) 815, 1729
NspV TTCGAA 1 cut(s) 266
OliI CACNNNNGTG 1 cut(s) 1918
PaeI GCATGC 1 cut(s) 1729
PaeR7I CTCGAG 1 cut(s) 821
PagI TCATGA 2 cut(s) 894, 1204
PceI AGGCCT 2 cut(s) 289, 1972
PcsI WCGNNNNNNNCGW 2 cut(s) 77, 86
PctI GAATGC 2 cut(s) 1318, 1534
PfeI GAWTC 6 cut(s) 111, 124, 584, 684, 844, 1514
PflFI GACNNNGTC 1 cut(s) 724
PleI GAGTC 8 cut(s) 229, 625, 631, 655, 973, 1198, 1344, 1590
PluTI GGCGCC 1 cut(s) 13
PpsI GAGTC 8 cut(s) 229, 625, 631, 655, 973, 1198, 1344, 1590
PpuMI RGGWCCY 1 cut(s) 189
PshBI ATTAAT 1 cut(s) 1152
Psp124BI GAGCTC 3 cut(s) 658, 822, 1270
Psp5II RGGWCCY 1 cut(s) 189
Psp6I CCWGG 4 cut(s) 167, 185, 1142, 1785
PspGI CCWGG 4 cut(s) 167, 185, 1142, 1785
PspPI GGNCC 7 cut(s) 28, 189, 213, 399, 793, 1858, 2046
PspPPI RGGWCCY 1 cut(s) 189
PsuI RGATCY 5 cut(s) 146, 182, 1606, 1886, 1945
PsyI GACNNNGTC 1 cut(s) 724
RseI CAYNNNNRTG 4 cut(s) 594, 1455, 1918, 1989
SacI GAGCTC 3 cut(s) 658, 822, 1270
SaqAI TTAA 3 cut(s) 1071, 1152, 1547
Sau96I GGNCC 7 cut(s) 28, 189, 213, 399, 793, 1858, 2046
SchI GAGTC 8 cut(s) 230, 626, 631, 655, 974, 1199, 1345, 1591
ScrFI CCNGG 6 cut(s) 42, 43, 169, 187, 1144, 1787
SduI GDGCHC 7 cut(s) 634, 658, 822, 832, 942, 1270, 1621
SfaNI GCATC 2 cut(s) 1070, 1224
SfcI CTRYAG 2 cut(s) 106, 1593
SfoI GGCGCC 1 cut(s) 11
Sfr274I CTCGAG 1 cut(s) 821
SfuI TTCGAA 1 cut(s) 266
SinI GGWCC 4 cut(s) 28, 189, 1858, 2046
SlaI CTCGAG 1 cut(s) 821
SmaI CCCGGG 1 cut(s) 43
SmiMI CAYNNNNRTG 4 cut(s) 594, 1455, 1918, 1989
SmlI CTYRAG 5 cut(s) 821, 983, 1088, 1269, 1301
SmoI CTYRAG 5 cut(s) 821, 983, 1088, 1269, 1301
SpeI ACTAGT 1 cut(s) 1952
SphI GCATGC 1 cut(s) 1729
Sse9I AATT 4 cut(s) 744, 1136, 1544, 1747
SseBI AGGCCT 2 cut(s) 289, 1972
SspDI GGCGCC 1 cut(s) 9
SspI AATATT 1 cut(s) 579
SspMI CTAG 8 cut(s) 645, 666, 786, 1878, 1893, 1905, 1953, 2009
SstI GAGCTC 3 cut(s) 658, 822, 1270
StuI AGGCCT 2 cut(s) 289, 1972
StyD4I CCNGG 6 cut(s) 40, 41, 167, 185, 1142, 1785
StyI CCWWGG 3 cut(s) 216, 1441, 1984
TaaI ACNGT 4 cut(s) 279, 476, 679, 2055
TaiI ACGT 3 cut(s) 342, 697, 728
TaqI TCGA 9 cut(s) 92, 266, 499, 622, 650, 822, 963, 1215, 1844
TaqII GACCGA 1 cut(s) 414
TasI AATT 4 cut(s) 744, 1136, 1544, 1747
TauI GCSGC 4 cut(s) 252, 255, 258, 317
TfiI GAWTC 6 cut(s) 111, 124, 584, 684, 844, 1514
Tru1I TTAA 3 cut(s) 1071, 1152, 1547
Tru9I TTAA 3 cut(s) 1071, 1152, 1547
TscAI CASTG 2 cut(s) 1925, 1996
TseI GCWGC 9 cut(s) 63, 600, 920, 956, 1252, 1316, 1418, 1598, 1927
TspGWI ACGGA 1 cut(s) 456
TspMI CCCGGG 1 cut(s) 41
TspRI CASTG 2 cut(s) 1925, 1996
Tth111I GACNNNGTC 1 cut(s) 724
VpaK11BI GGWCC 4 cut(s) 28, 189, 1858, 2046
VspI ATTAAT 1 cut(s) 1152
XagI CCTNNNNNAGG 1 cut(s) 608
XapI RAATTY 1 cut(s) 1747
XceI RCATGY 2 cut(s) 815, 1729
XcmI CCANNNNNNNNNTGG 2 cut(s) 1868, 1917
XhoI CTCGAG 1 cut(s) 821
XmaI CCCGGG 1 cut(s) 41
XspI CTAG 8 cut(s) 645, 666, 786, 1878, 1893, 1905, 1953, 2009
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.